HEADER TRANSCRIPTIONAL REGULATOR 30-MAR-10 3MDK TITLE STRUCTURE OF STRINGENT STARVATION PROTEIN A (SSPA) FROM PSEUDOMONAS TITLE 2 PUTIDA COMPND MOL_ID: 1; COMPND 2 MOLECULE: STRINGENT STARVATION PROTEIN A; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA; SOURCE 3 ORGANISM_TAXID: 160488; SOURCE 4 STRAIN: KT2440; SOURCE 5 GENE: PP1320, SSPA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: BC-PSGX4(BC) KEYWDS STRUCTURAL GENOMICS, GST-SUPERFAMILY, SSPA, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 NYSGXRC, TRANSCRIPTIONAL REGULATOR EXPDTA X-RAY DIFFRACTION AUTHOR U.A.RAMAGOPAL,R.TORO,S.K.BURLEY,S.C.ALMO,NEW YORK SGX RESEARCH CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS (NYSGXRC) REVDAT 4 10-FEB-21 3MDK 1 AUTHOR JRNL LINK REVDAT 3 08-NOV-17 3MDK 1 REMARK REVDAT 2 13-JUL-11 3MDK 1 VERSN REVDAT 1 12-MAY-10 3MDK 0 JRNL AUTH U.A.RAMAGOPAL,R.TORO,S.K.BURLEY,S.C.ALMO JRNL TITL STRUCTURE OF STRINGENT STARVATION PROTEIN A (SSPA) FROM JRNL TITL 2 PSEUDOMONAS PUTIDA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 3 NUMBER OF REFLECTIONS : 38081 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1925 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2634 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.58 REMARK 3 BIN R VALUE (WORKING SET) : 0.2840 REMARK 3 BIN FREE R VALUE SET COUNT : 136 REMARK 3 BIN FREE R VALUE : 0.3360 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3231 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 75 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.83000 REMARK 3 B22 (A**2) : -1.11000 REMARK 3 B33 (A**2) : 2.63000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.16000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.157 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.149 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.120 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.892 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3339 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4547 ; 1.505 ; 1.992 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 412 ; 5.524 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 154 ;32.116 ;22.078 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 565 ;14.654 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 41 ;19.313 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 507 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2567 ; 0.009 ; 0.022 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2066 ; 0.766 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3355 ; 1.297 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1273 ; 2.192 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1189 ; 3.216 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6 A 205 REMARK 3 RESIDUE RANGE : A 216 A 246 REMARK 3 ORIGIN FOR THE GROUP (A): 9.8520 -0.4610 26.3440 REMARK 3 T TENSOR REMARK 3 T11: 0.0529 T22: 0.1335 REMARK 3 T33: 0.1956 T12: -0.0208 REMARK 3 T13: 0.0134 T23: -0.0393 REMARK 3 L TENSOR REMARK 3 L11: 3.2586 L22: 1.8264 REMARK 3 L33: 1.2880 L12: 0.2449 REMARK 3 L13: 0.3985 L23: 0.2916 REMARK 3 S TENSOR REMARK 3 S11: 0.1711 S12: -0.2315 S13: -0.0100 REMARK 3 S21: 0.2017 S22: -0.0698 S23: -0.2510 REMARK 3 S31: 0.1328 S32: 0.0388 S33: -0.1013 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 206 REMARK 3 RESIDUE RANGE : B 216 B 259 REMARK 3 ORIGIN FOR THE GROUP (A): -15.3760 0.8420 14.9000 REMARK 3 T TENSOR REMARK 3 T11: 0.0401 T22: 0.1546 REMARK 3 T33: 0.1001 T12: -0.0267 REMARK 3 T13: 0.0444 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 4.1327 L22: 1.5548 REMARK 3 L33: 1.5416 L12: -0.9371 REMARK 3 L13: 0.3660 L23: 0.3127 REMARK 3 S TENSOR REMARK 3 S11: 0.0583 S12: -0.0379 S13: -0.0708 REMARK 3 S21: 0.0301 S22: 0.0479 S23: -0.0999 REMARK 3 S31: 0.0508 S32: -0.1614 S33: -0.1063 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 3MDK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-APR-10. REMARK 100 THE DEPOSITION ID IS D_1000058412. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38147 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 0.49900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, CCP4 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS PH 5.5, 25% PEG 3350, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 54.03000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.45800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 54.03000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.45800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -1 REMARK 465 SER A 0 REMARK 465 LEU A 1 REMARK 465 GLY A 2 REMARK 465 ALA A 3 REMARK 465 THR A 4 REMARK 465 ASN A 5 REMARK 465 LYS A 206 REMARK 465 LEU A 207 REMARK 465 GLU A 208 REMARK 465 GLY A 209 REMARK 465 HIS A 210 REMARK 465 HIS A 211 REMARK 465 HIS A 212 REMARK 465 HIS A 213 REMARK 465 HIS A 214 REMARK 465 HIS A 215 REMARK 465 MSE B -1 REMARK 465 SER B 0 REMARK 465 LEU B 207 REMARK 465 GLU B 208 REMARK 465 GLY B 209 REMARK 465 HIS B 210 REMARK 465 HIS B 211 REMARK 465 HIS B 212 REMARK 465 HIS B 213 REMARK 465 HIS B 214 REMARK 465 HIS B 215 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 135 CG2 REMARK 470 LEU B 42 CG CD1 CD2 REMARK 470 LYS B 45 CD CE NZ REMARK 470 ARG B 175 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 191 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 67 117.80 68.14 REMARK 500 ALA A 177 36.94 -83.27 REMARK 500 GLU B 67 113.51 71.14 REMARK 500 TRP B 106 -52.88 -121.88 REMARK 500 CYS B 146 -160.67 -112.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-21019D RELATED DB: TARGETDB DBREF 3MDK A 2 207 UNP Q88N92 Q88N92_PSEPK 2 207 DBREF 3MDK B 2 207 UNP Q88N92 Q88N92_PSEPK 2 207 SEQADV 3MDK MSE A -1 UNP Q88N92 EXPRESSION TAG SEQADV 3MDK SER A 0 UNP Q88N92 EXPRESSION TAG SEQADV 3MDK LEU A 1 UNP Q88N92 EXPRESSION TAG SEQADV 3MDK GLU A 208 UNP Q88N92 EXPRESSION TAG SEQADV 3MDK GLY A 209 UNP Q88N92 EXPRESSION TAG SEQADV 3MDK HIS A 210 UNP Q88N92 EXPRESSION TAG SEQADV 3MDK HIS A 211 UNP Q88N92 EXPRESSION TAG SEQADV 3MDK HIS A 212 UNP Q88N92 EXPRESSION TAG SEQADV 3MDK HIS A 213 UNP Q88N92 EXPRESSION TAG SEQADV 3MDK HIS A 214 UNP Q88N92 EXPRESSION TAG SEQADV 3MDK HIS A 215 UNP Q88N92 EXPRESSION TAG SEQADV 3MDK MSE B -1 UNP Q88N92 EXPRESSION TAG SEQADV 3MDK SER B 0 UNP Q88N92 EXPRESSION TAG SEQADV 3MDK LEU B 1 UNP Q88N92 EXPRESSION TAG SEQADV 3MDK GLU B 208 UNP Q88N92 EXPRESSION TAG SEQADV 3MDK GLY B 209 UNP Q88N92 EXPRESSION TAG SEQADV 3MDK HIS B 210 UNP Q88N92 EXPRESSION TAG SEQADV 3MDK HIS B 211 UNP Q88N92 EXPRESSION TAG SEQADV 3MDK HIS B 212 UNP Q88N92 EXPRESSION TAG SEQADV 3MDK HIS B 213 UNP Q88N92 EXPRESSION TAG SEQADV 3MDK HIS B 214 UNP Q88N92 EXPRESSION TAG SEQADV 3MDK HIS B 215 UNP Q88N92 EXPRESSION TAG SEQRES 1 A 217 MSE SER LEU GLY ALA THR ASN ARG LEU ALA CYS TYR SER SEQRES 2 A 217 ASP PRO ALA ASP HIS TYR SER HIS ARG VAL ARG LEU VAL SEQRES 3 A 217 LEU ALA GLU LYS GLY VAL SER VAL GLN LEU ILE ASP VAL SEQRES 4 A 217 ASP PRO ALA HIS LEU PRO ARG LYS LEU ALA GLU VAL ASN SEQRES 5 A 217 PRO TYR GLY SER VAL PRO THR LEU VAL ASP ARG ASP LEU SEQRES 6 A 217 ALA LEU TYR GLU SER THR VAL VAL MSE GLU TYR LEU GLU SEQRES 7 A 217 GLU ARG TYR PRO HIS PRO PRO LEU MSE PRO VAL TYR PRO SEQRES 8 A 217 VAL ALA ARG GLY ASN SER ARG LEU LEU MSE HIS ARG ILE SEQRES 9 A 217 GLN ARG ASP TRP CYS ALA LEU ALA ASP THR VAL LEU ASP SEQRES 10 A 217 PRO ARG SER SER GLU ALA ALA ARG THR GLU ALA ARG LYS SEQRES 11 A 217 ALA LEU ARG GLU SER LEU THR GLY VAL SER PRO LEU PHE SEQRES 12 A 217 SER GLU PHE ALA CYS PHE MSE SER ASP GLU GLN SER LEU SEQRES 13 A 217 VAL ASP CYS CYS LEU LEU PRO ILE LEU TRP ARG LEU PRO SEQRES 14 A 217 VAL LEU GLY ILE GLU LEU PRO ARG GLN ALA LYS PRO LEU SEQRES 15 A 217 LEU ASP TYR MSE GLU ARG GLN PHE ALA ARG GLU PRO PHE SEQRES 16 A 217 GLN ALA SER LEU SER SER VAL GLU ARG GLU MSE ARG LYS SEQRES 17 A 217 LEU GLU GLY HIS HIS HIS HIS HIS HIS SEQRES 1 B 217 MSE SER LEU GLY ALA THR ASN ARG LEU ALA CYS TYR SER SEQRES 2 B 217 ASP PRO ALA ASP HIS TYR SER HIS ARG VAL ARG LEU VAL SEQRES 3 B 217 LEU ALA GLU LYS GLY VAL SER VAL GLN LEU ILE ASP VAL SEQRES 4 B 217 ASP PRO ALA HIS LEU PRO ARG LYS LEU ALA GLU VAL ASN SEQRES 5 B 217 PRO TYR GLY SER VAL PRO THR LEU VAL ASP ARG ASP LEU SEQRES 6 B 217 ALA LEU TYR GLU SER THR VAL VAL MSE GLU TYR LEU GLU SEQRES 7 B 217 GLU ARG TYR PRO HIS PRO PRO LEU MSE PRO VAL TYR PRO SEQRES 8 B 217 VAL ALA ARG GLY ASN SER ARG LEU LEU MSE HIS ARG ILE SEQRES 9 B 217 GLN ARG ASP TRP CYS ALA LEU ALA ASP THR VAL LEU ASP SEQRES 10 B 217 PRO ARG SER SER GLU ALA ALA ARG THR GLU ALA ARG LYS SEQRES 11 B 217 ALA LEU ARG GLU SER LEU THR GLY VAL SER PRO LEU PHE SEQRES 12 B 217 SER GLU PHE ALA CYS PHE MSE SER ASP GLU GLN SER LEU SEQRES 13 B 217 VAL ASP CYS CYS LEU LEU PRO ILE LEU TRP ARG LEU PRO SEQRES 14 B 217 VAL LEU GLY ILE GLU LEU PRO ARG GLN ALA LYS PRO LEU SEQRES 15 B 217 LEU ASP TYR MSE GLU ARG GLN PHE ALA ARG GLU PRO PHE SEQRES 16 B 217 GLN ALA SER LEU SER SER VAL GLU ARG GLU MSE ARG LYS SEQRES 17 B 217 LEU GLU GLY HIS HIS HIS HIS HIS HIS MODRES 3MDK MSE A 72 MET SELENOMETHIONINE MODRES 3MDK MSE A 85 MET SELENOMETHIONINE MODRES 3MDK MSE A 99 MET SELENOMETHIONINE MODRES 3MDK MSE A 148 MET SELENOMETHIONINE MODRES 3MDK MSE A 184 MET SELENOMETHIONINE MODRES 3MDK MSE A 204 MET SELENOMETHIONINE MODRES 3MDK MSE B 72 MET SELENOMETHIONINE MODRES 3MDK MSE B 85 MET SELENOMETHIONINE MODRES 3MDK MSE B 99 MET SELENOMETHIONINE MODRES 3MDK MSE B 148 MET SELENOMETHIONINE MODRES 3MDK MSE B 184 MET SELENOMETHIONINE MODRES 3MDK MSE B 204 MET SELENOMETHIONINE HET MSE A 72 8 HET MSE A 85 8 HET MSE A 99 8 HET MSE A 148 8 HET MSE A 184 8 HET MSE A 204 8 HET MSE B 72 8 HET MSE B 85 8 HET MSE B 99 8 HET MSE B 148 8 HET MSE B 184 8 HET MSE B 204 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 3 HOH *75(H2 O) HELIX 1 1 ASP A 15 GLY A 29 1 15 HELIX 2 2 PRO A 43 GLU A 48 1 6 HELIX 3 3 GLU A 67 TYR A 79 1 13 HELIX 4 4 TYR A 88 TRP A 106 1 19 HELIX 5 5 TRP A 106 ASP A 115 1 10 HELIX 6 6 SER A 119 SER A 138 1 20 HELIX 7 7 PRO A 139 GLU A 143 5 5 HELIX 8 8 SER A 153 ARG A 165 1 13 HELIX 9 9 ARG A 165 GLY A 170 1 6 HELIX 10 10 ALA A 177 ARG A 190 1 14 HELIX 11 11 ARG A 190 LEU A 197 1 8 HELIX 12 12 SER A 198 GLU A 203 1 6 HELIX 13 13 ASP B 15 GLY B 29 1 15 HELIX 14 14 PRO B 43 GLU B 48 1 6 HELIX 15 15 GLU B 67 TYR B 79 1 13 HELIX 16 16 TYR B 88 TRP B 106 1 19 HELIX 17 17 TRP B 106 ASP B 115 1 10 HELIX 18 18 SER B 119 SER B 138 1 20 HELIX 19 19 PRO B 139 GLU B 143 5 5 HELIX 20 20 SER B 153 ARG B 165 1 13 HELIX 21 21 PRO B 174 GLN B 176 5 3 HELIX 22 22 ALA B 177 ARG B 190 1 14 HELIX 23 23 ARG B 190 LEU B 197 1 8 HELIX 24 24 SER B 198 GLU B 203 1 6 SHEET 1 A 4 VAL A 32 ASP A 36 0 SHEET 2 A 4 LEU A 7 SER A 11 1 N CYS A 9 O GLN A 33 SHEET 3 A 4 THR A 57 ASP A 60 -1 O VAL A 59 N ALA A 8 SHEET 4 A 4 LEU A 63 TYR A 66 -1 O LEU A 65 N LEU A 58 SHEET 1 B 4 GLN B 33 ASP B 36 0 SHEET 2 B 4 ALA B 8 SER B 11 1 N CYS B 9 O ILE B 35 SHEET 3 B 4 THR B 57 ASP B 60 -1 O THR B 57 N TYR B 10 SHEET 4 B 4 LEU B 63 TYR B 66 -1 O LEU B 65 N LEU B 58 LINK C VAL A 71 N MSE A 72 1555 1555 1.33 LINK C MSE A 72 N GLU A 73 1555 1555 1.33 LINK C LEU A 84 N MSE A 85 1555 1555 1.33 LINK C MSE A 85 N PRO A 86 1555 1555 1.34 LINK C LEU A 98 N MSE A 99 1555 1555 1.33 LINK C MSE A 99 N HIS A 100 1555 1555 1.33 LINK C PHE A 147 N MSE A 148 1555 1555 1.34 LINK C MSE A 148 N SER A 149 1555 1555 1.34 LINK C TYR A 183 N MSE A 184 1555 1555 1.32 LINK C MSE A 184 N GLU A 185 1555 1555 1.34 LINK C GLU A 203 N MSE A 204 1555 1555 1.34 LINK C MSE A 204 N ARG A 205 1555 1555 1.33 LINK C VAL B 71 N MSE B 72 1555 1555 1.33 LINK C MSE B 72 N GLU B 73 1555 1555 1.33 LINK C LEU B 84 N MSE B 85 1555 1555 1.32 LINK C MSE B 85 N PRO B 86 1555 1555 1.35 LINK C LEU B 98 N MSE B 99 1555 1555 1.34 LINK C MSE B 99 N HIS B 100 1555 1555 1.33 LINK C PHE B 147 N MSE B 148 1555 1555 1.33 LINK C MSE B 148 N SER B 149 1555 1555 1.33 LINK C TYR B 183 N MSE B 184 1555 1555 1.34 LINK C MSE B 184 N GLU B 185 1555 1555 1.34 LINK C GLU B 203 N MSE B 204 1555 1555 1.34 LINK C MSE B 204 N ARG B 205 1555 1555 1.34 CISPEP 1 VAL A 55 PRO A 56 0 8.75 CISPEP 2 HIS A 81 PRO A 82 0 -4.31 CISPEP 3 VAL B 55 PRO B 56 0 4.65 CISPEP 4 HIS B 81 PRO B 82 0 -2.74 CRYST1 108.060 48.916 91.388 90.00 107.24 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009254 0.000000 0.002871 0.00000 SCALE2 0.000000 0.020443 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011457 0.00000