data_3MFP # _entry.id 3MFP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.320 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3MFP RCSB RCSB058487 WWPDB D_1000058487 # _pdbx_database_related.db_name EMDB _pdbx_database_related.db_id EMD-5168 _pdbx_database_related.details . _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3MFP _pdbx_database_status.recvd_initial_deposition_date 2010-04-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fujii, T.' 1 'Iwane, A.H.' 2 'Yanagida, T.' 3 'Namba, K.' 4 # _citation.id primary _citation.title 'Direct visualization of secondary structures of F-actin by electron cryomicroscopy' _citation.journal_abbrev Nature _citation.journal_volume 467 _citation.page_first 724 _citation.page_last 728 _citation.year 2010 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20844487 _citation.pdbx_database_id_DOI 10.1038/nature09372 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fujii, T.' 1 ? primary 'Iwane, A.H.' 2 ? primary 'Yanagida, T.' 3 ? primary 'Namba, K.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Actin, alpha skeletal muscle' 41875.633 1 ? ? ? ? 2 non-polymer syn "ADENOSINE-5'-DIPHOSPHATE" 427.201 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'F-actin, Alpha-actin-1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE(HIC)GII TNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSG DGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSL EKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKE ITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF ; _entity_poly.pdbx_seq_one_letter_code_can ;DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD DMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVT HNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITAL APSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 GLU n 1 3 ASP n 1 4 GLU n 1 5 THR n 1 6 THR n 1 7 ALA n 1 8 LEU n 1 9 VAL n 1 10 CYS n 1 11 ASP n 1 12 ASN n 1 13 GLY n 1 14 SER n 1 15 GLY n 1 16 LEU n 1 17 VAL n 1 18 LYS n 1 19 ALA n 1 20 GLY n 1 21 PHE n 1 22 ALA n 1 23 GLY n 1 24 ASP n 1 25 ASP n 1 26 ALA n 1 27 PRO n 1 28 ARG n 1 29 ALA n 1 30 VAL n 1 31 PHE n 1 32 PRO n 1 33 SER n 1 34 ILE n 1 35 VAL n 1 36 GLY n 1 37 ARG n 1 38 PRO n 1 39 ARG n 1 40 HIS n 1 41 GLN n 1 42 GLY n 1 43 VAL n 1 44 MET n 1 45 VAL n 1 46 GLY n 1 47 MET n 1 48 GLY n 1 49 GLN n 1 50 LYS n 1 51 ASP n 1 52 SER n 1 53 TYR n 1 54 VAL n 1 55 GLY n 1 56 ASP n 1 57 GLU n 1 58 ALA n 1 59 GLN n 1 60 SER n 1 61 LYS n 1 62 ARG n 1 63 GLY n 1 64 ILE n 1 65 LEU n 1 66 THR n 1 67 LEU n 1 68 LYS n 1 69 TYR n 1 70 PRO n 1 71 ILE n 1 72 GLU n 1 73 HIC n 1 74 GLY n 1 75 ILE n 1 76 ILE n 1 77 THR n 1 78 ASN n 1 79 TRP n 1 80 ASP n 1 81 ASP n 1 82 MET n 1 83 GLU n 1 84 LYS n 1 85 ILE n 1 86 TRP n 1 87 HIS n 1 88 HIS n 1 89 THR n 1 90 PHE n 1 91 TYR n 1 92 ASN n 1 93 GLU n 1 94 LEU n 1 95 ARG n 1 96 VAL n 1 97 ALA n 1 98 PRO n 1 99 GLU n 1 100 GLU n 1 101 HIS n 1 102 PRO n 1 103 THR n 1 104 LEU n 1 105 LEU n 1 106 THR n 1 107 GLU n 1 108 ALA n 1 109 PRO n 1 110 LEU n 1 111 ASN n 1 112 PRO n 1 113 LYS n 1 114 ALA n 1 115 ASN n 1 116 ARG n 1 117 GLU n 1 118 LYS n 1 119 MET n 1 120 THR n 1 121 GLN n 1 122 ILE n 1 123 MET n 1 124 PHE n 1 125 GLU n 1 126 THR n 1 127 PHE n 1 128 ASN n 1 129 VAL n 1 130 PRO n 1 131 ALA n 1 132 MET n 1 133 TYR n 1 134 VAL n 1 135 ALA n 1 136 ILE n 1 137 GLN n 1 138 ALA n 1 139 VAL n 1 140 LEU n 1 141 SER n 1 142 LEU n 1 143 TYR n 1 144 ALA n 1 145 SER n 1 146 GLY n 1 147 ARG n 1 148 THR n 1 149 THR n 1 150 GLY n 1 151 ILE n 1 152 VAL n 1 153 LEU n 1 154 ASP n 1 155 SER n 1 156 GLY n 1 157 ASP n 1 158 GLY n 1 159 VAL n 1 160 THR n 1 161 HIS n 1 162 ASN n 1 163 VAL n 1 164 PRO n 1 165 ILE n 1 166 TYR n 1 167 GLU n 1 168 GLY n 1 169 TYR n 1 170 ALA n 1 171 LEU n 1 172 PRO n 1 173 HIS n 1 174 ALA n 1 175 ILE n 1 176 MET n 1 177 ARG n 1 178 LEU n 1 179 ASP n 1 180 LEU n 1 181 ALA n 1 182 GLY n 1 183 ARG n 1 184 ASP n 1 185 LEU n 1 186 THR n 1 187 ASP n 1 188 TYR n 1 189 LEU n 1 190 MET n 1 191 LYS n 1 192 ILE n 1 193 LEU n 1 194 THR n 1 195 GLU n 1 196 ARG n 1 197 GLY n 1 198 TYR n 1 199 SER n 1 200 PHE n 1 201 VAL n 1 202 THR n 1 203 THR n 1 204 ALA n 1 205 GLU n 1 206 ARG n 1 207 GLU n 1 208 ILE n 1 209 VAL n 1 210 ARG n 1 211 ASP n 1 212 ILE n 1 213 LYS n 1 214 GLU n 1 215 LYS n 1 216 LEU n 1 217 CYS n 1 218 TYR n 1 219 VAL n 1 220 ALA n 1 221 LEU n 1 222 ASP n 1 223 PHE n 1 224 GLU n 1 225 ASN n 1 226 GLU n 1 227 MET n 1 228 ALA n 1 229 THR n 1 230 ALA n 1 231 ALA n 1 232 SER n 1 233 SER n 1 234 SER n 1 235 SER n 1 236 LEU n 1 237 GLU n 1 238 LYS n 1 239 SER n 1 240 TYR n 1 241 GLU n 1 242 LEU n 1 243 PRO n 1 244 ASP n 1 245 GLY n 1 246 GLN n 1 247 VAL n 1 248 ILE n 1 249 THR n 1 250 ILE n 1 251 GLY n 1 252 ASN n 1 253 GLU n 1 254 ARG n 1 255 PHE n 1 256 ARG n 1 257 CYS n 1 258 PRO n 1 259 GLU n 1 260 THR n 1 261 LEU n 1 262 PHE n 1 263 GLN n 1 264 PRO n 1 265 SER n 1 266 PHE n 1 267 ILE n 1 268 GLY n 1 269 MET n 1 270 GLU n 1 271 SER n 1 272 ALA n 1 273 GLY n 1 274 ILE n 1 275 HIS n 1 276 GLU n 1 277 THR n 1 278 THR n 1 279 TYR n 1 280 ASN n 1 281 SER n 1 282 ILE n 1 283 MET n 1 284 LYS n 1 285 CYS n 1 286 ASP n 1 287 ILE n 1 288 ASP n 1 289 ILE n 1 290 ARG n 1 291 LYS n 1 292 ASP n 1 293 LEU n 1 294 TYR n 1 295 ALA n 1 296 ASN n 1 297 ASN n 1 298 VAL n 1 299 MET n 1 300 SER n 1 301 GLY n 1 302 GLY n 1 303 THR n 1 304 THR n 1 305 MET n 1 306 TYR n 1 307 PRO n 1 308 GLY n 1 309 ILE n 1 310 ALA n 1 311 ASP n 1 312 ARG n 1 313 MET n 1 314 GLN n 1 315 LYS n 1 316 GLU n 1 317 ILE n 1 318 THR n 1 319 ALA n 1 320 LEU n 1 321 ALA n 1 322 PRO n 1 323 SER n 1 324 THR n 1 325 MET n 1 326 LYS n 1 327 ILE n 1 328 LYS n 1 329 ILE n 1 330 ILE n 1 331 ALA n 1 332 PRO n 1 333 PRO n 1 334 GLU n 1 335 ARG n 1 336 LYS n 1 337 TYR n 1 338 SER n 1 339 VAL n 1 340 TRP n 1 341 ILE n 1 342 GLY n 1 343 GLY n 1 344 SER n 1 345 ILE n 1 346 LEU n 1 347 ALA n 1 348 SER n 1 349 LEU n 1 350 SER n 1 351 THR n 1 352 PHE n 1 353 GLN n 1 354 GLN n 1 355 MET n 1 356 TRP n 1 357 ILE n 1 358 THR n 1 359 LYS n 1 360 GLN n 1 361 GLU n 1 362 TYR n 1 363 ASP n 1 364 GLU n 1 365 ALA n 1 366 GLY n 1 367 PRO n 1 368 SER n 1 369 ILE n 1 370 VAL n 1 371 HIS n 1 372 ARG n 1 373 LYS n 1 374 CYS n 1 375 PHE n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name Rabbit _entity_src_nat.pdbx_organism_scientific 'Oryctolagus cuniculus' _entity_src_nat.pdbx_ncbi_taxonomy_id 9986 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ACTS_RABIT _struct_ref.pdbx_db_accession P68135 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD DMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVT HNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITAL APSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF ; _struct_ref.pdbx_align_begin 3 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3MFP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 375 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P68135 _struct_ref_seq.db_align_beg 3 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 377 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 375 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ADP non-polymer n "ADENOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O10 P2' 427.201 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIC 'L-peptide linking' n 4-METHYL-HISTIDINE ? 'C7 H11 N3 O2' 169.181 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3MFP _exptl.method 'ELECTRON MICROSCOPY' _exptl.crystals_number ? # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2934 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 27 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2961 _refine_hist.d_res_high . _refine_hist.d_res_low . # _struct.entry_id 3MFP _struct.title 'Atomic model of F-actin based on a 6.6 angstrom resolution cryoEM map' _struct.pdbx_descriptor 'Actin, alpha skeletal muscle' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3MFP _struct_keywords.pdbx_keywords 'CONTRACTILE PROTEIN' _struct_keywords.text 'helical filament, muscle protein, CONTRACTILE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 VAL A 54 ? LYS A 61 ? VAL A 54 LYS A 61 1 ? 8 HELX_P HELX_P2 2 ASN A 78 ? ASN A 92 ? ASN A 78 ASN A 92 1 ? 15 HELX_P HELX_P3 3 ALA A 97 ? HIS A 101 ? ALA A 97 HIS A 101 5 ? 5 HELX_P HELX_P4 4 PRO A 112 ? THR A 126 ? PRO A 112 THR A 126 1 ? 15 HELX_P HELX_P5 5 GLN A 137 ? GLY A 146 ? GLN A 137 GLY A 146 1 ? 10 HELX_P HELX_P6 6 ALA A 181 ? GLU A 195 ? ALA A 181 GLU A 195 1 ? 15 HELX_P HELX_P7 7 THR A 202 ? CYS A 217 ? THR A 202 CYS A 217 1 ? 16 HELX_P HELX_P8 8 ASP A 222 ? ALA A 231 ? ASP A 222 ALA A 231 1 ? 10 HELX_P HELX_P9 9 ASN A 252 ? THR A 260 ? ASN A 252 THR A 260 1 ? 9 HELX_P HELX_P10 10 LEU A 261 ? PHE A 262 ? LEU A 261 PHE A 262 5 ? 2 HELX_P HELX_P11 11 GLN A 263 ? GLY A 268 ? GLN A 263 GLY A 268 5 ? 6 HELX_P HELX_P12 12 GLY A 273 ? MET A 283 ? GLY A 273 MET A 283 1 ? 11 HELX_P HELX_P13 13 LYS A 284 ? CYS A 285 ? LYS A 284 CYS A 285 5 ? 2 HELX_P HELX_P14 14 ASP A 286 ? ASP A 288 ? ASP A 286 ASP A 288 5 ? 3 HELX_P HELX_P15 15 ILE A 289 ? ALA A 295 ? ILE A 289 ALA A 295 1 ? 7 HELX_P HELX_P16 16 GLY A 301 ? MET A 305 ? GLY A 301 MET A 305 5 ? 5 HELX_P HELX_P17 17 GLY A 308 ? ALA A 321 ? GLY A 308 ALA A 321 1 ? 14 HELX_P HELX_P18 18 TYR A 337 ? SER A 348 ? TYR A 337 SER A 348 1 ? 12 HELX_P HELX_P19 19 LEU A 349 ? TRP A 356 ? LEU A 349 TRP A 356 5 ? 8 HELX_P HELX_P20 20 LYS A 359 ? GLY A 366 ? LYS A 359 GLY A 366 1 ? 8 HELX_P HELX_P21 21 PRO A 367 ? HIS A 371 ? PRO A 367 HIS A 371 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A GLU 72 C ? ? ? 1_555 A HIC 73 N ? ? A GLU 72 A HIC 73 1_555 ? ? ? ? ? ? ? 1.344 ? covale2 covale both ? A HIC 73 C ? ? ? 1_555 A GLY 74 N ? ? A HIC 73 A GLY 74 1_555 ? ? ? ? ? ? ? 1.327 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 3 ? C ? 5 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? parallel C 4 5 ? parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 29 ? PRO A 32 ? ALA A 29 PRO A 32 A 2 LEU A 16 ? PHE A 21 ? LEU A 16 PHE A 21 A 3 LEU A 8 ? ASN A 12 ? LEU A 8 ASN A 12 A 4 THR A 103 ? GLU A 107 ? THR A 103 GLU A 107 A 5 ALA A 131 ? ILE A 136 ? ALA A 131 ILE A 136 A 6 ILE A 357 ? THR A 358 ? ILE A 357 THR A 358 B 1 TYR A 169 ? ALA A 170 ? TYR A 169 ALA A 170 B 2 THR A 160 ? TYR A 166 ? THR A 160 TYR A 166 B 3 MET A 176 ? LEU A 178 ? MET A 176 LEU A 178 C 1 TYR A 169 ? ALA A 170 ? TYR A 169 ALA A 170 C 2 THR A 160 ? TYR A 166 ? THR A 160 TYR A 166 C 3 GLY A 150 ? SER A 155 ? GLY A 150 SER A 155 C 4 ASN A 297 ? SER A 300 ? ASN A 297 SER A 300 C 5 ILE A 329 ? ILE A 330 ? ILE A 329 ILE A 330 D 1 LYS A 238 ? GLU A 241 ? LYS A 238 GLU A 241 D 2 VAL A 247 ? ILE A 250 ? VAL A 247 ILE A 250 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 31 ? O PHE A 31 N VAL A 17 ? N VAL A 17 A 2 3 O LYS A 18 ? O LYS A 18 N ASP A 11 ? N ASP A 11 A 3 4 N LEU A 8 ? N LEU A 8 O LEU A 104 ? O LEU A 104 A 4 5 N LEU A 105 ? N LEU A 105 O TYR A 133 ? O TYR A 133 A 5 6 N MET A 132 ? N MET A 132 O ILE A 357 ? O ILE A 357 B 1 2 O TYR A 169 ? O TYR A 169 N TYR A 166 ? N TYR A 166 B 2 3 N THR A 160 ? N THR A 160 O LEU A 178 ? O LEU A 178 C 1 2 O TYR A 169 ? O TYR A 169 N TYR A 166 ? N TYR A 166 C 2 3 O ILE A 165 ? O ILE A 165 N GLY A 150 ? N GLY A 150 C 3 4 N LEU A 153 ? N LEU A 153 O VAL A 298 ? O VAL A 298 C 4 5 N ASN A 297 ? N ASN A 297 O ILE A 330 ? O ILE A 330 D 1 2 N TYR A 240 ? N TYR A 240 O ILE A 248 ? O ILE A 248 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 12 _struct_site.details 'BINDING SITE FOR RESIDUE ADP A 376' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 GLY A 156 ? GLY A 156 . ? 1_555 ? 2 AC1 12 ASP A 157 ? ASP A 157 . ? 1_555 ? 3 AC1 12 GLY A 158 ? GLY A 158 . ? 1_555 ? 4 AC1 12 GLY A 182 ? GLY A 182 . ? 1_555 ? 5 AC1 12 LYS A 213 ? LYS A 213 . ? 1_555 ? 6 AC1 12 GLU A 214 ? GLU A 214 . ? 1_555 ? 7 AC1 12 GLY A 301 ? GLY A 301 . ? 1_555 ? 8 AC1 12 GLY A 302 ? GLY A 302 . ? 1_555 ? 9 AC1 12 THR A 303 ? THR A 303 . ? 1_555 ? 10 AC1 12 MET A 305 ? MET A 305 . ? 1_555 ? 11 AC1 12 TYR A 306 ? TYR A 306 . ? 1_555 ? 12 AC1 12 LYS A 336 ? LYS A 336 . ? 1_555 ? # _database_PDB_matrix.entry_id 3MFP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3MFP _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 1 ASP ASP A . n A 1 2 GLU 2 2 2 GLU GLU A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 ALA 7 7 7 ALA ALA A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 CYS 10 10 10 CYS CYS A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 PHE 21 21 21 PHE PHE A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 PRO 27 27 27 PRO PRO A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 PHE 31 31 31 PHE PHE A . n A 1 32 PRO 32 32 32 PRO PRO A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 ARG 37 37 37 ARG ARG A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 HIS 40 40 40 HIS HIS A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 MET 44 44 44 MET MET A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 MET 47 47 47 MET MET A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 GLN 59 59 59 GLN GLN A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 ARG 62 62 62 ARG ARG A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 LEU 65 65 65 LEU LEU A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 TYR 69 69 69 TYR TYR A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 ILE 71 71 71 ILE ILE A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 HIC 73 73 73 HIC HIC A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 ILE 75 75 75 ILE ILE A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 ASN 78 78 78 ASN ASN A . n A 1 79 TRP 79 79 79 TRP TRP A . n A 1 80 ASP 80 80 80 ASP ASP A . n A 1 81 ASP 81 81 81 ASP ASP A . n A 1 82 MET 82 82 82 MET MET A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 TRP 86 86 86 TRP TRP A . n A 1 87 HIS 87 87 87 HIS HIS A . n A 1 88 HIS 88 88 88 HIS HIS A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 PHE 90 90 90 PHE PHE A . n A 1 91 TYR 91 91 91 TYR TYR A . n A 1 92 ASN 92 92 92 ASN ASN A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 ARG 95 95 95 ARG ARG A . n A 1 96 VAL 96 96 96 VAL VAL A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 PRO 98 98 98 PRO PRO A . n A 1 99 GLU 99 99 99 GLU GLU A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 HIS 101 101 101 HIS HIS A . n A 1 102 PRO 102 102 102 PRO PRO A . n A 1 103 THR 103 103 103 THR THR A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 THR 106 106 106 THR THR A . n A 1 107 GLU 107 107 107 GLU GLU A . n A 1 108 ALA 108 108 108 ALA ALA A . n A 1 109 PRO 109 109 109 PRO PRO A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 ASN 111 111 111 ASN ASN A . n A 1 112 PRO 112 112 112 PRO PRO A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 ASN 115 115 115 ASN ASN A . n A 1 116 ARG 116 116 116 ARG ARG A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 LYS 118 118 118 LYS LYS A . n A 1 119 MET 119 119 119 MET MET A . n A 1 120 THR 120 120 120 THR THR A . n A 1 121 GLN 121 121 121 GLN GLN A . n A 1 122 ILE 122 122 122 ILE ILE A . n A 1 123 MET 123 123 123 MET MET A . n A 1 124 PHE 124 124 124 PHE PHE A . n A 1 125 GLU 125 125 125 GLU GLU A . n A 1 126 THR 126 126 126 THR THR A . n A 1 127 PHE 127 127 127 PHE PHE A . n A 1 128 ASN 128 128 128 ASN ASN A . n A 1 129 VAL 129 129 129 VAL VAL A . n A 1 130 PRO 130 130 130 PRO PRO A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 MET 132 132 132 MET MET A . n A 1 133 TYR 133 133 133 TYR TYR A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 ALA 135 135 135 ALA ALA A . n A 1 136 ILE 136 136 136 ILE ILE A . n A 1 137 GLN 137 137 137 GLN GLN A . n A 1 138 ALA 138 138 138 ALA ALA A . n A 1 139 VAL 139 139 139 VAL VAL A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 SER 141 141 141 SER SER A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 TYR 143 143 143 TYR TYR A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 SER 145 145 145 SER SER A . n A 1 146 GLY 146 146 146 GLY GLY A . n A 1 147 ARG 147 147 147 ARG ARG A . n A 1 148 THR 148 148 148 THR THR A . n A 1 149 THR 149 149 149 THR THR A . n A 1 150 GLY 150 150 150 GLY GLY A . n A 1 151 ILE 151 151 151 ILE ILE A . n A 1 152 VAL 152 152 152 VAL VAL A . n A 1 153 LEU 153 153 153 LEU LEU A . n A 1 154 ASP 154 154 154 ASP ASP A . n A 1 155 SER 155 155 155 SER SER A . n A 1 156 GLY 156 156 156 GLY GLY A . n A 1 157 ASP 157 157 157 ASP ASP A . n A 1 158 GLY 158 158 158 GLY GLY A . n A 1 159 VAL 159 159 159 VAL VAL A . n A 1 160 THR 160 160 160 THR THR A . n A 1 161 HIS 161 161 161 HIS HIS A . n A 1 162 ASN 162 162 162 ASN ASN A . n A 1 163 VAL 163 163 163 VAL VAL A . n A 1 164 PRO 164 164 164 PRO PRO A . n A 1 165 ILE 165 165 165 ILE ILE A . n A 1 166 TYR 166 166 166 TYR TYR A . n A 1 167 GLU 167 167 167 GLU GLU A . n A 1 168 GLY 168 168 168 GLY GLY A . n A 1 169 TYR 169 169 169 TYR TYR A . n A 1 170 ALA 170 170 170 ALA ALA A . n A 1 171 LEU 171 171 171 LEU LEU A . n A 1 172 PRO 172 172 172 PRO PRO A . n A 1 173 HIS 173 173 173 HIS HIS A . n A 1 174 ALA 174 174 174 ALA ALA A . n A 1 175 ILE 175 175 175 ILE ILE A . n A 1 176 MET 176 176 176 MET MET A . n A 1 177 ARG 177 177 177 ARG ARG A . n A 1 178 LEU 178 178 178 LEU LEU A . n A 1 179 ASP 179 179 179 ASP ASP A . n A 1 180 LEU 180 180 180 LEU LEU A . n A 1 181 ALA 181 181 181 ALA ALA A . n A 1 182 GLY 182 182 182 GLY GLY A . n A 1 183 ARG 183 183 183 ARG ARG A . n A 1 184 ASP 184 184 184 ASP ASP A . n A 1 185 LEU 185 185 185 LEU LEU A . n A 1 186 THR 186 186 186 THR THR A . n A 1 187 ASP 187 187 187 ASP ASP A . n A 1 188 TYR 188 188 188 TYR TYR A . n A 1 189 LEU 189 189 189 LEU LEU A . n A 1 190 MET 190 190 190 MET MET A . n A 1 191 LYS 191 191 191 LYS LYS A . n A 1 192 ILE 192 192 192 ILE ILE A . n A 1 193 LEU 193 193 193 LEU LEU A . n A 1 194 THR 194 194 194 THR THR A . n A 1 195 GLU 195 195 195 GLU GLU A . n A 1 196 ARG 196 196 196 ARG ARG A . n A 1 197 GLY 197 197 197 GLY GLY A . n A 1 198 TYR 198 198 198 TYR TYR A . n A 1 199 SER 199 199 199 SER SER A . n A 1 200 PHE 200 200 200 PHE PHE A . n A 1 201 VAL 201 201 201 VAL VAL A . n A 1 202 THR 202 202 202 THR THR A . n A 1 203 THR 203 203 203 THR THR A . n A 1 204 ALA 204 204 204 ALA ALA A . n A 1 205 GLU 205 205 205 GLU GLU A . n A 1 206 ARG 206 206 206 ARG ARG A . n A 1 207 GLU 207 207 207 GLU GLU A . n A 1 208 ILE 208 208 208 ILE ILE A . n A 1 209 VAL 209 209 209 VAL VAL A . n A 1 210 ARG 210 210 210 ARG ARG A . n A 1 211 ASP 211 211 211 ASP ASP A . n A 1 212 ILE 212 212 212 ILE ILE A . n A 1 213 LYS 213 213 213 LYS LYS A . n A 1 214 GLU 214 214 214 GLU GLU A . n A 1 215 LYS 215 215 215 LYS LYS A . n A 1 216 LEU 216 216 216 LEU LEU A . n A 1 217 CYS 217 217 217 CYS CYS A . n A 1 218 TYR 218 218 218 TYR TYR A . n A 1 219 VAL 219 219 219 VAL VAL A . n A 1 220 ALA 220 220 220 ALA ALA A . n A 1 221 LEU 221 221 221 LEU LEU A . n A 1 222 ASP 222 222 222 ASP ASP A . n A 1 223 PHE 223 223 223 PHE PHE A . n A 1 224 GLU 224 224 224 GLU GLU A . n A 1 225 ASN 225 225 225 ASN ASN A . n A 1 226 GLU 226 226 226 GLU GLU A . n A 1 227 MET 227 227 227 MET MET A . n A 1 228 ALA 228 228 228 ALA ALA A . n A 1 229 THR 229 229 229 THR THR A . n A 1 230 ALA 230 230 230 ALA ALA A . n A 1 231 ALA 231 231 231 ALA ALA A . n A 1 232 SER 232 232 232 SER SER A . n A 1 233 SER 233 233 233 SER SER A . n A 1 234 SER 234 234 234 SER SER A . n A 1 235 SER 235 235 235 SER SER A . n A 1 236 LEU 236 236 236 LEU LEU A . n A 1 237 GLU 237 237 237 GLU GLU A . n A 1 238 LYS 238 238 238 LYS LYS A . n A 1 239 SER 239 239 239 SER SER A . n A 1 240 TYR 240 240 240 TYR TYR A . n A 1 241 GLU 241 241 241 GLU GLU A . n A 1 242 LEU 242 242 242 LEU LEU A . n A 1 243 PRO 243 243 243 PRO PRO A . n A 1 244 ASP 244 244 244 ASP ASP A . n A 1 245 GLY 245 245 245 GLY GLY A . n A 1 246 GLN 246 246 246 GLN GLN A . n A 1 247 VAL 247 247 247 VAL VAL A . n A 1 248 ILE 248 248 248 ILE ILE A . n A 1 249 THR 249 249 249 THR THR A . n A 1 250 ILE 250 250 250 ILE ILE A . n A 1 251 GLY 251 251 251 GLY GLY A . n A 1 252 ASN 252 252 252 ASN ASN A . n A 1 253 GLU 253 253 253 GLU GLU A . n A 1 254 ARG 254 254 254 ARG ARG A . n A 1 255 PHE 255 255 255 PHE PHE A . n A 1 256 ARG 256 256 256 ARG ARG A . n A 1 257 CYS 257 257 257 CYS CYS A . n A 1 258 PRO 258 258 258 PRO PRO A . n A 1 259 GLU 259 259 259 GLU GLU A . n A 1 260 THR 260 260 260 THR THR A . n A 1 261 LEU 261 261 261 LEU LEU A . n A 1 262 PHE 262 262 262 PHE PHE A . n A 1 263 GLN 263 263 263 GLN GLN A . n A 1 264 PRO 264 264 264 PRO PRO A . n A 1 265 SER 265 265 265 SER SER A . n A 1 266 PHE 266 266 266 PHE PHE A . n A 1 267 ILE 267 267 267 ILE ILE A . n A 1 268 GLY 268 268 268 GLY GLY A . n A 1 269 MET 269 269 269 MET MET A . n A 1 270 GLU 270 270 270 GLU GLU A . n A 1 271 SER 271 271 271 SER SER A . n A 1 272 ALA 272 272 272 ALA ALA A . n A 1 273 GLY 273 273 273 GLY GLY A . n A 1 274 ILE 274 274 274 ILE ILE A . n A 1 275 HIS 275 275 275 HIS HIS A . n A 1 276 GLU 276 276 276 GLU GLU A . n A 1 277 THR 277 277 277 THR THR A . n A 1 278 THR 278 278 278 THR THR A . n A 1 279 TYR 279 279 279 TYR TYR A . n A 1 280 ASN 280 280 280 ASN ASN A . n A 1 281 SER 281 281 281 SER SER A . n A 1 282 ILE 282 282 282 ILE ILE A . n A 1 283 MET 283 283 283 MET MET A . n A 1 284 LYS 284 284 284 LYS LYS A . n A 1 285 CYS 285 285 285 CYS CYS A . n A 1 286 ASP 286 286 286 ASP ASP A . n A 1 287 ILE 287 287 287 ILE ILE A . n A 1 288 ASP 288 288 288 ASP ASP A . n A 1 289 ILE 289 289 289 ILE ILE A . n A 1 290 ARG 290 290 290 ARG ARG A . n A 1 291 LYS 291 291 291 LYS LYS A . n A 1 292 ASP 292 292 292 ASP ASP A . n A 1 293 LEU 293 293 293 LEU LEU A . n A 1 294 TYR 294 294 294 TYR TYR A . n A 1 295 ALA 295 295 295 ALA ALA A . n A 1 296 ASN 296 296 296 ASN ASN A . n A 1 297 ASN 297 297 297 ASN ASN A . n A 1 298 VAL 298 298 298 VAL VAL A . n A 1 299 MET 299 299 299 MET MET A . n A 1 300 SER 300 300 300 SER SER A . n A 1 301 GLY 301 301 301 GLY GLY A . n A 1 302 GLY 302 302 302 GLY GLY A . n A 1 303 THR 303 303 303 THR THR A . n A 1 304 THR 304 304 304 THR THR A . n A 1 305 MET 305 305 305 MET MET A . n A 1 306 TYR 306 306 306 TYR TYR A . n A 1 307 PRO 307 307 307 PRO PRO A . n A 1 308 GLY 308 308 308 GLY GLY A . n A 1 309 ILE 309 309 309 ILE ILE A . n A 1 310 ALA 310 310 310 ALA ALA A . n A 1 311 ASP 311 311 311 ASP ASP A . n A 1 312 ARG 312 312 312 ARG ARG A . n A 1 313 MET 313 313 313 MET MET A . n A 1 314 GLN 314 314 314 GLN GLN A . n A 1 315 LYS 315 315 315 LYS LYS A . n A 1 316 GLU 316 316 316 GLU GLU A . n A 1 317 ILE 317 317 317 ILE ILE A . n A 1 318 THR 318 318 318 THR THR A . n A 1 319 ALA 319 319 319 ALA ALA A . n A 1 320 LEU 320 320 320 LEU LEU A . n A 1 321 ALA 321 321 321 ALA ALA A . n A 1 322 PRO 322 322 322 PRO PRO A . n A 1 323 SER 323 323 323 SER SER A . n A 1 324 THR 324 324 324 THR THR A . n A 1 325 MET 325 325 325 MET MET A . n A 1 326 LYS 326 326 326 LYS LYS A . n A 1 327 ILE 327 327 327 ILE ILE A . n A 1 328 LYS 328 328 328 LYS LYS A . n A 1 329 ILE 329 329 329 ILE ILE A . n A 1 330 ILE 330 330 330 ILE ILE A . n A 1 331 ALA 331 331 331 ALA ALA A . n A 1 332 PRO 332 332 332 PRO PRO A . n A 1 333 PRO 333 333 333 PRO PRO A . n A 1 334 GLU 334 334 334 GLU GLU A . n A 1 335 ARG 335 335 335 ARG ARG A . n A 1 336 LYS 336 336 336 LYS LYS A . n A 1 337 TYR 337 337 337 TYR TYR A . n A 1 338 SER 338 338 338 SER SER A . n A 1 339 VAL 339 339 339 VAL VAL A . n A 1 340 TRP 340 340 340 TRP TRP A . n A 1 341 ILE 341 341 341 ILE ILE A . n A 1 342 GLY 342 342 342 GLY GLY A . n A 1 343 GLY 343 343 343 GLY GLY A . n A 1 344 SER 344 344 344 SER SER A . n A 1 345 ILE 345 345 345 ILE ILE A . n A 1 346 LEU 346 346 346 LEU LEU A . n A 1 347 ALA 347 347 347 ALA ALA A . n A 1 348 SER 348 348 348 SER SER A . n A 1 349 LEU 349 349 349 LEU LEU A . n A 1 350 SER 350 350 350 SER SER A . n A 1 351 THR 351 351 351 THR THR A . n A 1 352 PHE 352 352 352 PHE PHE A . n A 1 353 GLN 353 353 353 GLN GLN A . n A 1 354 GLN 354 354 354 GLN GLN A . n A 1 355 MET 355 355 355 MET MET A . n A 1 356 TRP 356 356 356 TRP TRP A . n A 1 357 ILE 357 357 357 ILE ILE A . n A 1 358 THR 358 358 358 THR THR A . n A 1 359 LYS 359 359 359 LYS LYS A . n A 1 360 GLN 360 360 360 GLN GLN A . n A 1 361 GLU 361 361 361 GLU GLU A . n A 1 362 TYR 362 362 362 TYR TYR A . n A 1 363 ASP 363 363 363 ASP ASP A . n A 1 364 GLU 364 364 364 GLU GLU A . n A 1 365 ALA 365 365 365 ALA ALA A . n A 1 366 GLY 366 366 366 GLY GLY A . n A 1 367 PRO 367 367 367 PRO PRO A . n A 1 368 SER 368 368 368 SER SER A . n A 1 369 ILE 369 369 369 ILE ILE A . n A 1 370 VAL 370 370 370 VAL VAL A . n A 1 371 HIS 371 371 371 HIS HIS A . n A 1 372 ARG 372 372 372 ARG ARG A . n A 1 373 LYS 373 373 373 LYS LYS A . n A 1 374 CYS 374 374 374 CYS CYS A . n A 1 375 PHE 375 375 375 PHE PHE A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id ADP _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 376 _pdbx_nonpoly_scheme.auth_seq_num 376 _pdbx_nonpoly_scheme.pdb_mon_id ADP _pdbx_nonpoly_scheme.auth_mon_id ADP _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id HIC _pdbx_struct_mod_residue.label_seq_id 73 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id HIC _pdbx_struct_mod_residue.auth_seq_id 73 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id HIS _pdbx_struct_mod_residue.details 4-METHYL-HISTIDINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'representative helical assembly' ? pentameric 5 2 'helical asymmetric unit' ? monomeric 1 3 'helical asymmetric unit, std helical frame' ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-5)' A,B 2 3 A,B 3 H A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] H 'transform to helical frame' ? ? 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 1 'helical symmetry operation' ? ? 0.89346547 0.44913188 0.00000000 0.00000 -0.44913188 0.89346547 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 -55.20000 2 'helical symmetry operation' ? ? -0.97300192 -0.23079702 0.00000000 0.00000 0.23079702 -0.97300192 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 -27.60000 3 'helical symmetry operation' ? ? 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 4 'helical symmetry operation' ? ? -0.97300192 0.23079702 0.00000000 0.00000 -0.23079702 -0.97300192 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 27.60000 5 'helical symmetry operation' ? ? 0.89346547 -0.44913188 0.00000000 0.00000 0.44913188 0.89346547 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 55.20000 # _pdbx_helical_symmetry.entry_id 3MFP _pdbx_helical_symmetry.number_of_operations 5 _pdbx_helical_symmetry.rotation_per_n_subunits -166.656000 _pdbx_helical_symmetry.rise_per_n_subunits 27.600000 _pdbx_helical_symmetry.n_subunits_divisor 1 _pdbx_helical_symmetry.dyad_axis no _pdbx_helical_symmetry.circular_symmetry 1 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-09-29 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2014-02-19 4 'Structure model' 1 3 2019-12-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' em_image_scans 3 4 'Structure model' em_single_particle_entity 4 4 'Structure model' em_software 5 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_em_software.fitting_id' 2 4 'Structure model' '_em_software.image_processing_id' 3 4 'Structure model' '_em_software.name' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 3MFP _em_3d_fitting.ref_protocol 'FLEXIBLE FIT' _em_3d_fitting.ref_space REAL _em_3d_fitting.overall_b_value ? _em_3d_fitting.target_criteria 'Cross-correlation coefficient' _em_3d_fitting.details 'REFINEMENT PROTOCOL--flexible fitting' _em_3d_fitting.method ? # _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.id 1 _em_3d_fitting_list.pdb_entry_id 1J6Z _em_3d_fitting_list.pdb_chain_id ? _em_3d_fitting_list.details ? # _em_3d_reconstruction.entry_id 3MFP _em_3d_reconstruction.id 1 _em_3d_reconstruction.symmetry_type HELICAL _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size 1.742 _em_3d_reconstruction.resolution 6.6 _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution_method ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles ? _em_3d_reconstruction.algorithm ? # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.pH 7.5 _em_buffer.details ? # _em_entity_assembly.id 1 _em_entity_assembly.name F-actin _em_entity_assembly.type COMPLEX _em_entity_assembly.parent_id 0 _em_entity_assembly.synonym ? _em_entity_assembly.details ? _em_entity_assembly.oligomeric_details ? # _em_imaging.entry_id 3MFP _em_imaging.id 1 _em_imaging.microscope_model 'JEOL 3200FSC' _em_imaging.date 2009-03-21 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.specimen_id 1 _em_imaging.temperature 50 _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_defocus_max 2500 _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_cs 1.6 _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_magnification 100000 _em_imaging.calibrated_magnification 172414 _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.accelerating_voltage 200 _em_imaging.details ? _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.citation_id ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? # _em_vitrification.entry_id 3MFP _em_vitrification.id 1 _em_vitrification.instrument 'FEI VITROBOT MARK I' _em_vitrification.cryogen_name ETHANE _em_vitrification.specimen_id 1 _em_vitrification.humidity ? _em_vitrification.chamber_temperature ? _em_vitrification.details ? _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 3MFP _em_experiment.id 1 _em_experiment.reconstruction_method HELICAL _em_experiment.aggregation_state FILAMENT _em_experiment.entity_assembly_id 1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 2 ? ? 178.95 -154.56 2 1 ASP A 3 ? ? -66.64 -133.71 3 1 GLU A 4 ? ? 40.47 -159.85 4 1 THR A 5 ? ? 179.61 156.18 5 1 LEU A 8 ? ? -58.79 101.60 6 1 GLN A 41 ? ? 21.83 97.31 7 1 VAL A 43 ? ? 52.17 -129.50 8 1 MET A 44 ? ? 137.98 -120.53 9 1 VAL A 45 ? ? -150.18 63.89 10 1 MET A 47 ? ? -144.04 -143.78 11 1 VAL A 54 ? ? 61.51 -82.08 12 1 ALA A 58 ? ? -40.72 -73.77 13 1 GLN A 59 ? ? -31.84 -71.10 14 1 ALA A 181 ? ? -161.41 -147.76 15 1 VAL A 201 ? ? -135.48 -33.07 16 1 ASP A 222 ? ? -163.78 118.74 17 1 GLU A 237 ? ? -73.67 38.14 18 1 GLU A 334 ? ? -104.87 78.10 19 1 ALA A 365 ? ? -107.64 41.35 20 1 SER A 368 ? ? -38.30 -39.79 21 1 VAL A 370 ? ? -64.72 9.69 22 1 LYS A 373 ? ? 71.92 38.61 23 1 CYS A 374 ? ? 172.15 -152.86 # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.film_or_detector_model 'TVIPS TEMCAM-F415 (4k x 4k)' _em_image_recording.avg_electron_dose_per_image 20 _em_image_recording.details '16 mega pixels slow-scan CCD camera' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.detector_mode ? _em_image_recording.average_exposure_time ? _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.id _em_software.name _em_software.version _em_software.category _em_software.details _em_software.image_processing_id _em_software.fitting_id 1 Flex-EM ? 'MODEL FITTING' ? ? 1 2 SPIDER ? RECONSTRUCTION ? 1 ? # _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.concentration ? _em_specimen.vitrification_applied YES _em_specimen.staining_applied NO _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.details ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name "ADENOSINE-5'-DIPHOSPHATE" _pdbx_entity_nonpoly.comp_id ADP #