HEADER CAROTENOID BINDING PROTEIN 05-APR-10 3MG3 TITLE CRYSTAL STRUCTURE OF THE ORANGE CAROTENOID PROTEIN R155L MUTANT FROM TITLE 2 CYANOBACTERIA SYNECHOCYSTIS SP. PCC 6803 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ORANGE CAROTENOID-BINDING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: OCP; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNECHOCYSTIS SP.; SOURCE 3 ORGANISM_TAXID: 1148; SOURCE 4 STRAIN: PCC 6803; SOURCE 5 GENE: SLR1963; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CAROTENOID BINDING PROTEIN, ECHINONE, PHYCOBILISOME EXPDTA X-RAY DIFFRACTION AUTHOR A.WILSON,J.KINNEY,P.H.ZWART,C.PUNGINELLI,S.D'HAEN,F.PERREAU, AUTHOR 2 M.G.KLEIN,D.KIRILOVSKY,C.A.KERFELD REVDAT 5 06-SEP-23 3MG3 1 REMARK REVDAT 4 06-OCT-21 3MG3 1 REMARK SEQADV REVDAT 3 08-NOV-17 3MG3 1 REMARK REVDAT 2 11-AUG-10 3MG3 1 JRNL REVDAT 1 14-APR-10 3MG3 0 SPRSDE 14-APR-10 3MG3 3I1X JRNL AUTH A.WILSON,J.N.KINNEY,P.H.ZWART,C.PUNGINELLI,S.D'HAENE, JRNL AUTH 2 F.PERREAU,M.G.KLEIN,D.KIRILOVSKY,C.A.KERFELD JRNL TITL STRUCTURAL DETERMINANTS UNDERLYING PHOTOPROTECTION IN THE JRNL TITL 2 PHOTOACTIVE ORANGE CAROTENOID PROTEIN OF CYANOBACTERIA. JRNL REF J.BIOL.CHEM. V. 285 18364 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 20368334 JRNL DOI 10.1074/JBC.M110.115709 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.A.KERFELD,M.R.SAWAYA,V.BRAHMANDAM,D.CASCIO,K.K.HO, REMARK 1 AUTH 2 C.C.TREVITHICK-SUTTON,D.W.KROGMANN,T.O.YEATES REMARK 1 TITL THE CRYSTAL STRUCTURE OF A CYANOBACTERIAL WATER-SOLUBLE REMARK 1 TITL 2 CAROTENOID BINDING PROTEIN. REMARK 1 REF STRUCTURE V. 11 55 2003 REMARK 1 REFN ISSN 0969-2126 REMARK 1 PMID 12517340 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_222 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.34 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 71837 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.155 REMARK 3 R VALUE (WORKING SET) : 0.153 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 3614 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.3537 - 3.6671 1.00 6873 369 0.1557 0.1793 REMARK 3 2 3.6671 - 2.9109 1.00 6863 372 0.1442 0.1754 REMARK 3 3 2.9109 - 2.5430 1.00 6839 373 0.1503 0.1970 REMARK 3 4 2.5430 - 2.3105 0.99 6807 395 0.1468 0.1954 REMARK 3 5 2.3105 - 2.1449 0.99 6812 362 0.1386 0.1833 REMARK 3 6 2.1449 - 2.0185 0.99 6822 361 0.1456 0.1971 REMARK 3 7 2.0185 - 1.9174 0.99 6859 344 0.1499 0.1813 REMARK 3 8 1.9174 - 1.8339 0.99 6772 355 0.1561 0.2060 REMARK 3 9 1.8339 - 1.7633 0.98 6766 349 0.1784 0.2297 REMARK 3 10 1.7633 - 1.7025 0.98 6810 334 0.2002 0.2469 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.39 REMARK 3 B_SOL : 45.92 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.66860 REMARK 3 B22 (A**2) : -0.66860 REMARK 3 B33 (A**2) : 1.33720 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 5048 REMARK 3 ANGLE : 1.432 6904 REMARK 3 CHIRALITY : 0.093 780 REMARK 3 PLANARITY : 0.014 910 REMARK 3 DIHEDRAL : 18.023 1924 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 4:72) REMARK 3 ORIGIN FOR THE GROUP (A): -21.4433 11.2423 -2.3099 REMARK 3 T TENSOR REMARK 3 T11: 0.0719 T22: 0.0229 REMARK 3 T33: 0.0567 T12: 0.0118 REMARK 3 T13: 0.0076 T23: -0.0270 REMARK 3 L TENSOR REMARK 3 L11: 0.3527 L22: 0.0439 REMARK 3 L33: 1.0019 L12: -0.0033 REMARK 3 L13: 0.2047 L23: 0.1956 REMARK 3 S TENSOR REMARK 3 S11: -0.1107 S12: 0.0276 S13: 0.0717 REMARK 3 S21: 0.1216 S22: 0.0445 S23: 0.0137 REMARK 3 S31: 0.1282 S32: 0.0481 S33: 0.0736 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 73:169) REMARK 3 ORIGIN FOR THE GROUP (A): -18.9009 6.0032 2.8715 REMARK 3 T TENSOR REMARK 3 T11: 0.1226 T22: 0.0316 REMARK 3 T33: 0.0423 T12: 0.0390 REMARK 3 T13: -0.0105 T23: -0.0169 REMARK 3 L TENSOR REMARK 3 L11: 1.6758 L22: 0.3545 REMARK 3 L33: 0.6027 L12: -0.7659 REMARK 3 L13: -0.4994 L23: 0.1615 REMARK 3 S TENSOR REMARK 3 S11: -0.1858 S12: -0.0236 S13: -0.0373 REMARK 3 S21: 0.1514 S22: 0.0990 S23: 0.0200 REMARK 3 S31: 0.2108 S32: 0.0438 S33: 0.0733 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 170:243) REMARK 3 ORIGIN FOR THE GROUP (A): -13.5467 21.2433 -21.1868 REMARK 3 T TENSOR REMARK 3 T11: 0.0204 T22: 0.1951 REMARK 3 T33: 0.0510 T12: 0.0063 REMARK 3 T13: 0.0130 T23: 0.0514 REMARK 3 L TENSOR REMARK 3 L11: 0.3503 L22: 0.5581 REMARK 3 L33: 0.6945 L12: -0.2310 REMARK 3 L13: -0.1983 L23: -0.2136 REMARK 3 S TENSOR REMARK 3 S11: -0.0369 S12: 0.1470 S13: 0.0546 REMARK 3 S21: -0.0491 S22: -0.0991 S23: -0.1276 REMARK 3 S31: 0.0304 S32: 0.3117 S33: 0.1145 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 244:320) REMARK 3 ORIGIN FOR THE GROUP (A): -23.9424 25.5305 -18.6306 REMARK 3 T TENSOR REMARK 3 T11: 0.0048 T22: 0.0673 REMARK 3 T33: 0.0353 T12: -0.0316 REMARK 3 T13: -0.0205 T23: 0.0433 REMARK 3 L TENSOR REMARK 3 L11: 0.0942 L22: 0.3280 REMARK 3 L33: 0.7206 L12: -0.1261 REMARK 3 L13: 0.2201 L23: -0.0935 REMARK 3 S TENSOR REMARK 3 S11: -0.0366 S12: 0.1226 S13: 0.0264 REMARK 3 S21: 0.0206 S22: -0.0611 S23: 0.0031 REMARK 3 S31: 0.0361 S32: 0.1203 S33: 0.0774 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN B AND RESID 5:72) REMARK 3 ORIGIN FOR THE GROUP (A): -21.8487 36.3391 11.4104 REMARK 3 T TENSOR REMARK 3 T11: 0.0735 T22: 0.0311 REMARK 3 T33: 0.0722 T12: -0.0104 REMARK 3 T13: -0.0005 T23: -0.0254 REMARK 3 L TENSOR REMARK 3 L11: 0.2058 L22: 0.0411 REMARK 3 L33: 0.9660 L12: 0.0217 REMARK 3 L13: -0.1330 L23: 0.1793 REMARK 3 S TENSOR REMARK 3 S11: -0.1077 S12: -0.0106 S13: -0.0778 REMARK 3 S21: -0.1022 S22: 0.0585 S23: -0.0031 REMARK 3 S31: -0.1077 S32: 0.0468 S33: 0.0584 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 73:169) REMARK 3 ORIGIN FOR THE GROUP (A): -18.9573 41.5910 6.2795 REMARK 3 T TENSOR REMARK 3 T11: 0.1239 T22: 0.0302 REMARK 3 T33: 0.0469 T12: -0.0425 REMARK 3 T13: 0.0132 T23: -0.0231 REMARK 3 L TENSOR REMARK 3 L11: 1.6735 L22: 0.3048 REMARK 3 L33: 0.6541 L12: 0.6632 REMARK 3 L13: 0.4281 L23: 0.0118 REMARK 3 S TENSOR REMARK 3 S11: -0.1797 S12: 0.0243 S13: 0.0202 REMARK 3 S21: -0.1249 S22: 0.0986 S23: 0.0024 REMARK 3 S31: -0.2257 S32: 0.0312 S33: 0.0727 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN B AND RESID 170:243) REMARK 3 ORIGIN FOR THE GROUP (A): -13.6064 26.3528 30.3996 REMARK 3 T TENSOR REMARK 3 T11: 0.0148 T22: 0.1686 REMARK 3 T33: 0.0382 T12: -0.0027 REMARK 3 T13: -0.0097 T23: 0.0440 REMARK 3 L TENSOR REMARK 3 L11: 0.3202 L22: 0.3575 REMARK 3 L33: 0.5856 L12: 0.2088 REMARK 3 L13: 0.1424 L23: -0.1793 REMARK 3 S TENSOR REMARK 3 S11: -0.0314 S12: -0.1483 S13: -0.0700 REMARK 3 S21: 0.0296 S22: -0.0817 S23: -0.0904 REMARK 3 S31: -0.0262 S32: 0.2586 S33: 0.0976 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 244:320) REMARK 3 ORIGIN FOR THE GROUP (A): -23.4777 22.2104 27.8956 REMARK 3 T TENSOR REMARK 3 T11: 0.0204 T22: 0.0637 REMARK 3 T33: 0.0396 T12: 0.0312 REMARK 3 T13: 0.0103 T23: 0.0368 REMARK 3 L TENSOR REMARK 3 L11: 0.1426 L22: 0.6586 REMARK 3 L33: 0.6713 L12: 0.1888 REMARK 3 L13: -0.2909 L23: -0.1785 REMARK 3 S TENSOR REMARK 3 S11: -0.0172 S12: -0.1125 S13: -0.0107 REMARK 3 S21: -0.0118 S22: -0.0560 S23: 0.0491 REMARK 3 S31: -0.0219 S32: 0.1237 S33: 0.0626 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3MG3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-APR-10. REMARK 100 THE DEPOSITION ID IS D_1000058501. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAY-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71874 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.55100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3I1V REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% PEG 3350, 100MM SODIUM ACETATE, 2% REMARK 280 GLYCEROL, PH 4.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.71400 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.85700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: DIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 PHE A 3 REMARK 465 ALA A 165 REMARK 465 GLY A 166 REMARK 465 LYS A 167 REMARK 465 ASP A 168 REMARK 465 GLY A 169 REMARK 465 LEU A 313 REMARK 465 ASN A 314 REMARK 465 PHE A 315 REMARK 465 ALA A 316 REMARK 465 VAL A 317 REMARK 465 HIS A 318 REMARK 465 HIS A 319 REMARK 465 HIS A 320 REMARK 465 HIS A 321 REMARK 465 HIS A 322 REMARK 465 HIS A 323 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 ALA B 165 REMARK 465 GLY B 166 REMARK 465 LYS B 167 REMARK 465 ASP B 168 REMARK 465 GLY B 169 REMARK 465 LEU B 312 REMARK 465 LEU B 313 REMARK 465 ASN B 314 REMARK 465 PHE B 315 REMARK 465 ALA B 316 REMARK 465 VAL B 317 REMARK 465 HIS B 318 REMARK 465 HIS B 319 REMARK 465 HIS B 320 REMARK 465 HIS B 321 REMARK 465 HIS B 322 REMARK 465 HIS B 323 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 4 OG1 CG2 REMARK 470 LYS A 69 CE NZ REMARK 470 LYS A 170 CG CD CE NZ REMARK 470 ARG A 171 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 170 CG CD CE NZ REMARK 470 LYS B 310 CE NZ REMARK 470 GLU B 311 O CD OE1 OE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LEU A 16 CG CD1 CD2 REMARK 480 ARG A 254 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1614 O HOH A 1621 2.11 REMARK 500 O HOH B 1101 O HOH B 1619 2.14 REMARK 500 O HOH B 1326 O HOH B 1619 2.18 REMARK 500 O HOH B 1329 O HOH B 1483 2.18 REMARK 500 O HOH B 1387 O HOH B 1423 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1558 O HOH A 1563 2564 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 12 53.62 39.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 WATER MOLECULES 1001-1648 IN THE COORDINATES CORRESPOND TO WATER REMARK 600 MOLECULES 1-648 IN THE RELEVANT PUBLICATION. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ECH A 351 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ECH B 351 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 324 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 325 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 324 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 325 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 326 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 326 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 327 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1M98 RELATED DB: PDB REMARK 900 ORANGE CAROTENOID BINDING PROTEIN FROM ARTHIROSPIRA REMARK 900 RELATED ID: 3MG1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ORANGE CAROTENOID BINDING PROTEIN FROM REMARK 900 SYNECHOCYSTIS SP. PCC 6803 REMARK 900 RELATED ID: 3MG2 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF Y44S MUTANT OF SYNECHOCYSTIS ORANGE CAROTENOID REMARK 900 BINDING PROTEIN DBREF 3MG3 A 1 316 UNP P74102 OCP_SYNY3 1 316 DBREF 3MG3 B 1 316 UNP P74102 OCP_SYNY3 1 316 SEQADV 3MG3 LEU A 155 UNP P74102 ARG 155 ENGINEERED MUTATION SEQADV 3MG3 VAL A 317 UNP P74102 EXPRESSION TAG SEQADV 3MG3 HIS A 318 UNP P74102 EXPRESSION TAG SEQADV 3MG3 HIS A 319 UNP P74102 EXPRESSION TAG SEQADV 3MG3 HIS A 320 UNP P74102 EXPRESSION TAG SEQADV 3MG3 HIS A 321 UNP P74102 EXPRESSION TAG SEQADV 3MG3 HIS A 322 UNP P74102 EXPRESSION TAG SEQADV 3MG3 HIS A 323 UNP P74102 EXPRESSION TAG SEQADV 3MG3 LEU B 155 UNP P74102 ARG 155 ENGINEERED MUTATION SEQADV 3MG3 VAL B 317 UNP P74102 EXPRESSION TAG SEQADV 3MG3 HIS B 318 UNP P74102 EXPRESSION TAG SEQADV 3MG3 HIS B 319 UNP P74102 EXPRESSION TAG SEQADV 3MG3 HIS B 320 UNP P74102 EXPRESSION TAG SEQADV 3MG3 HIS B 321 UNP P74102 EXPRESSION TAG SEQADV 3MG3 HIS B 322 UNP P74102 EXPRESSION TAG SEQADV 3MG3 HIS B 323 UNP P74102 EXPRESSION TAG SEQRES 1 A 323 MET PRO PHE THR ILE ASP SER ALA ARG GLY ILE PHE PRO SEQRES 2 A 323 ASN THR LEU ALA ALA ASP VAL VAL PRO ALA THR ILE ALA SEQRES 3 A 323 ARG PHE SER GLN LEU ASN ALA GLU ASP GLN LEU ALA LEU SEQRES 4 A 323 ILE TRP PHE ALA TYR LEU GLU MET GLY LYS THR LEU THR SEQRES 5 A 323 ILE ALA ALA PRO GLY ALA ALA SER MET GLN LEU ALA GLU SEQRES 6 A 323 ASN ALA LEU LYS GLU ILE GLN ALA MET GLY PRO LEU GLN SEQRES 7 A 323 GLN THR GLN ALA MET CYS ASP LEU ALA ASN ARG ALA ASP SEQRES 8 A 323 THR PRO LEU CYS ARG THR TYR ALA SER TRP SER PRO ASN SEQRES 9 A 323 ILE LYS LEU GLY PHE TRP TYR ARG LEU GLY GLU LEU MET SEQRES 10 A 323 GLU GLN GLY PHE VAL ALA PRO ILE PRO ALA GLY TYR GLN SEQRES 11 A 323 LEU SER ALA ASN ALA ASN ALA VAL LEU ALA THR ILE GLN SEQRES 12 A 323 GLY LEU GLU SER GLY GLN GLN ILE THR VAL LEU LEU ASN SEQRES 13 A 323 ALA VAL VAL ASP MET GLY PHE THR ALA GLY LYS ASP GLY SEQRES 14 A 323 LYS ARG ILE ALA GLU PRO VAL VAL PRO PRO GLN ASP THR SEQRES 15 A 323 ALA SER ARG THR LYS VAL SER ILE GLU GLY VAL THR ASN SEQRES 16 A 323 ALA THR VAL LEU ASN TYR MET ASP ASN LEU ASN ALA ASN SEQRES 17 A 323 ASP PHE ASP THR LEU ILE GLU LEU PHE THR SER ASP GLY SEQRES 18 A 323 ALA LEU GLN PRO PRO PHE GLN ARG PRO ILE VAL GLY LYS SEQRES 19 A 323 GLU ASN VAL LEU ARG PHE PHE ARG GLU GLU CYS GLN ASN SEQRES 20 A 323 LEU LYS LEU ILE PRO GLU ARG GLY VAL THR GLU PRO ALA SEQRES 21 A 323 GLU ASP GLY PHE THR GLN ILE LYS VAL THR GLY LYS VAL SEQRES 22 A 323 GLN THR PRO TRP PHE GLY GLY ASN VAL GLY MET ASN ILE SEQRES 23 A 323 ALA TRP ARG PHE LEU LEU ASN PRO GLU GLY LYS ILE PHE SEQRES 24 A 323 PHE VAL ALA ILE ASP LEU LEU ALA SER PRO LYS GLU LEU SEQRES 25 A 323 LEU ASN PHE ALA VAL HIS HIS HIS HIS HIS HIS SEQRES 1 B 323 MET PRO PHE THR ILE ASP SER ALA ARG GLY ILE PHE PRO SEQRES 2 B 323 ASN THR LEU ALA ALA ASP VAL VAL PRO ALA THR ILE ALA SEQRES 3 B 323 ARG PHE SER GLN LEU ASN ALA GLU ASP GLN LEU ALA LEU SEQRES 4 B 323 ILE TRP PHE ALA TYR LEU GLU MET GLY LYS THR LEU THR SEQRES 5 B 323 ILE ALA ALA PRO GLY ALA ALA SER MET GLN LEU ALA GLU SEQRES 6 B 323 ASN ALA LEU LYS GLU ILE GLN ALA MET GLY PRO LEU GLN SEQRES 7 B 323 GLN THR GLN ALA MET CYS ASP LEU ALA ASN ARG ALA ASP SEQRES 8 B 323 THR PRO LEU CYS ARG THR TYR ALA SER TRP SER PRO ASN SEQRES 9 B 323 ILE LYS LEU GLY PHE TRP TYR ARG LEU GLY GLU LEU MET SEQRES 10 B 323 GLU GLN GLY PHE VAL ALA PRO ILE PRO ALA GLY TYR GLN SEQRES 11 B 323 LEU SER ALA ASN ALA ASN ALA VAL LEU ALA THR ILE GLN SEQRES 12 B 323 GLY LEU GLU SER GLY GLN GLN ILE THR VAL LEU LEU ASN SEQRES 13 B 323 ALA VAL VAL ASP MET GLY PHE THR ALA GLY LYS ASP GLY SEQRES 14 B 323 LYS ARG ILE ALA GLU PRO VAL VAL PRO PRO GLN ASP THR SEQRES 15 B 323 ALA SER ARG THR LYS VAL SER ILE GLU GLY VAL THR ASN SEQRES 16 B 323 ALA THR VAL LEU ASN TYR MET ASP ASN LEU ASN ALA ASN SEQRES 17 B 323 ASP PHE ASP THR LEU ILE GLU LEU PHE THR SER ASP GLY SEQRES 18 B 323 ALA LEU GLN PRO PRO PHE GLN ARG PRO ILE VAL GLY LYS SEQRES 19 B 323 GLU ASN VAL LEU ARG PHE PHE ARG GLU GLU CYS GLN ASN SEQRES 20 B 323 LEU LYS LEU ILE PRO GLU ARG GLY VAL THR GLU PRO ALA SEQRES 21 B 323 GLU ASP GLY PHE THR GLN ILE LYS VAL THR GLY LYS VAL SEQRES 22 B 323 GLN THR PRO TRP PHE GLY GLY ASN VAL GLY MET ASN ILE SEQRES 23 B 323 ALA TRP ARG PHE LEU LEU ASN PRO GLU GLY LYS ILE PHE SEQRES 24 B 323 PHE VAL ALA ILE ASP LEU LEU ALA SER PRO LYS GLU LEU SEQRES 25 B 323 LEU ASN PHE ALA VAL HIS HIS HIS HIS HIS HIS HET ECH A 351 95 HET GOL A 324 14 HET GOL A 325 14 HET GOL A 326 12 HET ECH B 351 95 HET GOL B 324 14 HET GOL B 325 14 HET GOL B 326 12 HET GOL B 327 12 HETNAM ECH BETA,BETA-CAROTEN-4-ONE HETNAM GOL GLYCEROL HETSYN ECH ECHINENONE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 ECH 2(C40 H54 O) FORMUL 4 GOL 7(C3 H8 O3) FORMUL 12 HOH *648(H2 O) HELIX 1 1 THR A 4 ARG A 9 1 6 HELIX 2 2 ASP A 19 LEU A 31 1 13 HELIX 3 3 ASN A 32 GLY A 48 1 17 HELIX 4 4 GLY A 57 MET A 74 1 18 HELIX 5 5 GLY A 75 ARG A 89 1 15 HELIX 6 6 THR A 92 TRP A 101 1 10 HELIX 7 7 SER A 102 GLN A 119 1 18 HELIX 8 8 SER A 132 GLY A 144 1 13 HELIX 9 9 GLU A 146 ASP A 160 1 15 HELIX 10 10 ASP A 181 ARG A 185 5 5 HELIX 11 11 ASN A 195 ALA A 207 1 13 HELIX 12 12 ASP A 209 GLU A 215 1 7 HELIX 13 13 GLY A 233 CYS A 245 1 13 HELIX 14 14 GLU A 261 GLY A 263 5 3 HELIX 15 15 PHE A 278 VAL A 282 5 5 HELIX 16 16 SER A 308 LEU A 312 5 5 HELIX 17 17 THR B 4 ARG B 9 1 6 HELIX 18 18 ASP B 19 LEU B 31 1 13 HELIX 19 19 ASN B 32 GLY B 48 1 17 HELIX 20 20 GLY B 57 MET B 74 1 18 HELIX 21 21 GLY B 75 ARG B 89 1 15 HELIX 22 22 THR B 92 TRP B 101 1 10 HELIX 23 23 SER B 102 GLN B 119 1 18 HELIX 24 24 SER B 132 GLY B 144 1 13 HELIX 25 25 GLU B 146 ASP B 160 1 15 HELIX 26 26 ASP B 181 ARG B 185 5 5 HELIX 27 27 ASN B 195 ALA B 207 1 13 HELIX 28 28 ASP B 209 GLU B 215 1 7 HELIX 29 29 GLY B 233 CYS B 245 1 13 HELIX 30 30 GLU B 261 GLY B 263 5 3 HELIX 31 31 PHE B 278 VAL B 282 5 5 SHEET 1 A 6 ILE A 231 VAL A 232 0 SHEET 2 A 6 PHE A 217 GLN A 224 -1 N LEU A 223 O ILE A 231 SHEET 3 A 6 ILE A 298 LEU A 305 1 O ILE A 303 N GLN A 224 SHEET 4 A 6 MET A 284 LEU A 292 -1 N ALA A 287 O ASP A 304 SHEET 5 A 6 THR A 265 GLN A 274 -1 N ILE A 267 O PHE A 290 SHEET 6 A 6 LYS A 249 PRO A 259 -1 N GLU A 258 O GLN A 266 SHEET 1 B 6 ILE B 231 VAL B 232 0 SHEET 2 B 6 PHE B 217 GLN B 224 -1 N LEU B 223 O ILE B 231 SHEET 3 B 6 ILE B 298 LEU B 305 1 O ILE B 303 N GLN B 224 SHEET 4 B 6 MET B 284 LEU B 292 -1 N ALA B 287 O ASP B 304 SHEET 5 B 6 THR B 265 GLN B 274 -1 N ILE B 267 O PHE B 290 SHEET 6 B 6 LYS B 249 PRO B 259 -1 N GLU B 258 O GLN B 266 SITE 1 AC1 16 ILE A 40 TYR A 44 TRP A 110 TYR A 111 SITE 2 AC1 16 GLY A 114 ILE A 151 THR A 152 VAL A 158 SITE 3 AC1 16 TYR A 201 LEU A 205 CYS A 245 VAL A 273 SITE 4 AC1 16 MET A 284 TRP A 288 ILE A 303 GOL A 326 SITE 1 AC2 17 ILE B 40 TYR B 44 LEU B 107 TRP B 110 SITE 2 AC2 17 TYR B 111 GLY B 114 ILE B 151 THR B 152 SITE 3 AC2 17 VAL B 158 TYR B 201 LEU B 205 CYS B 245 SITE 4 AC2 17 VAL B 273 MET B 284 TRP B 288 ILE B 303 SITE 5 AC2 17 GOL B 326 SITE 1 AC3 10 ALA A 55 PRO A 56 GLY A 57 GLU A 174 SITE 2 AC3 10 PRO A 276 TRP A 277 HOH A1011 HOH A1088 SITE 3 AC3 10 HOH A1174 HOH A1376 SITE 1 AC4 6 ASN A 104 GLU A 244 TRP A 277 GOL A 326 SITE 2 AC4 6 HOH A1012 HOH A1019 SITE 1 AC5 10 ALA B 55 PRO B 56 GLY B 57 GLU B 174 SITE 2 AC5 10 PRO B 276 TRP B 277 HOH B1010 HOH B1059 SITE 3 AC5 10 HOH B1077 HOH B1171 SITE 1 AC6 6 ASN B 104 GLU B 244 TRP B 277 GOL B 326 SITE 2 AC6 6 HOH B1009 HOH B1023 SITE 1 AC7 9 PRO A 225 PRO A 226 GLN A 228 PHE A 240 SITE 2 AC7 9 GOL A 325 ECH A 351 HOH A1184 HOH A1462 SITE 3 AC7 9 HOH A1646 SITE 1 AC8 9 ASN B 156 PRO B 225 PRO B 226 GLN B 228 SITE 2 AC8 9 PHE B 240 GOL B 325 ECH B 351 HOH B1226 SITE 3 AC8 9 HOH B1485 SITE 1 AC9 13 SER A 132 ASN A 134 ARG B 9 GLY B 10 SITE 2 AC9 13 ILE B 11 PHE B 12 PRO B 13 THR B 15 SITE 3 AC9 13 ARG B 289 HOH B1035 HOH B1097 HOH B1134 SITE 4 AC9 13 HOH B1469 CRYST1 82.683 82.683 86.571 90.00 90.00 120.00 P 32 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012094 0.006983 0.000000 0.00000 SCALE2 0.000000 0.013965 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011551 0.00000