data_3MIM # _entry.id 3MIM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.290 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3MIM RCSB RCSB058591 WWPDB D_1000058591 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2018-03-07 _pdbx_database_PDB_obs_spr.pdb_id 5YRS _pdbx_database_PDB_obs_spr.replace_pdb_id 3MIM _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2NPH 'in situ substrate product complex with tethered dimer' unspecified PDB 1LV1 'unliganded tethered dimer' unspecified PDB 1G6L 'unliganded tethered dimer' unspecified # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 3MIM _pdbx_database_status.recvd_initial_deposition_date 2010-04-11 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # _audit_author.name 'Das, A.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;X-ray snapshot of HIV-1 protease in action: observation of tetrahedral intermediate and short ionic hydrogen bond SIHB with catalytic aspartate. ; _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_volume 132 _citation.page_first 6366 _citation.page_last 6373 _citation.year 2010 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 0002-7863 _citation.journal_id_CSD 0004 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20397633 _citation.pdbx_database_id_DOI 10.1021/ja100002b # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Das, A.' 1 primary 'Mahale, S.' 2 primary 'Prashar, V.' 3 primary 'Bihani, S.' 4 primary 'Ferrer, J.L.' 5 primary 'Hosur, M.V.' 6 # _cell.entry_id 3MIM _cell.length_a 62.56 _cell.length_b 62.56 _cell.length_c 81.86 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3MIM _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Protease 10817.782 1 3.4.23.16 C95M ? ? 2 polymer man Protease 11102.976 1 3.4.23.16 C1095A ? ? 3 polymer syn 'peptide ET(PHD)YVD' 774.815 1 ? ? ? ? 4 water nat water 18.015 194 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Retropepsin, PR' 2 'Retropepsin, PR' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGMTLNF ; ;PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGMTLNF ; A ? 2 'polypeptide(L)' no no ;PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGATLNFGGSSG ; ;PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGATLNFGGSSG ; B ? 3 'polypeptide(L)' no yes 'ET(HPH)YVD' ETFYVD X ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 GLN n 1 3 VAL n 1 4 THR n 1 5 LEU n 1 6 TRP n 1 7 GLN n 1 8 ARG n 1 9 PRO n 1 10 LEU n 1 11 VAL n 1 12 THR n 1 13 ILE n 1 14 LYS n 1 15 ILE n 1 16 GLY n 1 17 GLY n 1 18 GLN n 1 19 LEU n 1 20 LYS n 1 21 GLU n 1 22 ALA n 1 23 LEU n 1 24 LEU n 1 25 ASP n 1 26 THR n 1 27 GLY n 1 28 ALA n 1 29 ASP n 1 30 ASP n 1 31 THR n 1 32 VAL n 1 33 LEU n 1 34 GLU n 1 35 GLU n 1 36 MET n 1 37 SER n 1 38 LEU n 1 39 PRO n 1 40 GLY n 1 41 ARG n 1 42 TRP n 1 43 LYS n 1 44 PRO n 1 45 LYS n 1 46 MET n 1 47 ILE n 1 48 GLY n 1 49 GLY n 1 50 ILE n 1 51 GLY n 1 52 GLY n 1 53 PHE n 1 54 ILE n 1 55 LYS n 1 56 VAL n 1 57 ARG n 1 58 GLN n 1 59 TYR n 1 60 ASP n 1 61 GLN n 1 62 ILE n 1 63 LEU n 1 64 ILE n 1 65 GLU n 1 66 ILE n 1 67 CYS n 1 68 GLY n 1 69 HIS n 1 70 LYS n 1 71 ALA n 1 72 ILE n 1 73 GLY n 1 74 THR n 1 75 VAL n 1 76 LEU n 1 77 VAL n 1 78 GLY n 1 79 PRO n 1 80 THR n 1 81 PRO n 1 82 VAL n 1 83 ASN n 1 84 ILE n 1 85 ILE n 1 86 GLY n 1 87 ARG n 1 88 ASN n 1 89 LEU n 1 90 LEU n 1 91 THR n 1 92 GLN n 1 93 ILE n 1 94 GLY n 1 95 MET n 1 96 THR n 1 97 LEU n 1 98 ASN n 1 99 PHE n 2 1 PRO n 2 2 GLN n 2 3 VAL n 2 4 THR n 2 5 LEU n 2 6 TRP n 2 7 GLN n 2 8 ARG n 2 9 PRO n 2 10 LEU n 2 11 VAL n 2 12 THR n 2 13 ILE n 2 14 LYS n 2 15 ILE n 2 16 GLY n 2 17 GLY n 2 18 GLN n 2 19 LEU n 2 20 LYS n 2 21 GLU n 2 22 ALA n 2 23 LEU n 2 24 LEU n 2 25 ASP n 2 26 THR n 2 27 GLY n 2 28 ALA n 2 29 ASP n 2 30 ASP n 2 31 THR n 2 32 VAL n 2 33 LEU n 2 34 GLU n 2 35 GLU n 2 36 MET n 2 37 SER n 2 38 LEU n 2 39 PRO n 2 40 GLY n 2 41 ARG n 2 42 TRP n 2 43 LYS n 2 44 PRO n 2 45 LYS n 2 46 MET n 2 47 ILE n 2 48 GLY n 2 49 GLY n 2 50 ILE n 2 51 GLY n 2 52 GLY n 2 53 PHE n 2 54 ILE n 2 55 LYS n 2 56 VAL n 2 57 ARG n 2 58 GLN n 2 59 TYR n 2 60 ASP n 2 61 GLN n 2 62 ILE n 2 63 LEU n 2 64 ILE n 2 65 GLU n 2 66 ILE n 2 67 CYS n 2 68 GLY n 2 69 HIS n 2 70 LYS n 2 71 ALA n 2 72 ILE n 2 73 GLY n 2 74 THR n 2 75 VAL n 2 76 LEU n 2 77 VAL n 2 78 GLY n 2 79 PRO n 2 80 THR n 2 81 PRO n 2 82 VAL n 2 83 ASN n 2 84 ILE n 2 85 ILE n 2 86 GLY n 2 87 ARG n 2 88 ASN n 2 89 LEU n 2 90 LEU n 2 91 THR n 2 92 GLN n 2 93 ILE n 2 94 GLY n 2 95 ALA n 2 96 THR n 2 97 LEU n 2 98 ASN n 2 99 PHE n 2 100 GLY n 2 101 GLY n 2 102 SER n 2 103 SER n 2 104 GLY n 3 1 GLU n 3 2 THR n 3 3 HPH n 3 4 TYR n 3 5 VAL n 3 6 ASP n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? HIV-1 ? 'gag-pol, HIV-1 PR B' ? M:B_HXB2R ? ? ? ? 'Human immunodeficiency virus 1' 11706 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? 'BL21 DE3' ? ? ? ? ? ? ? 'pET 11a' ? ? ? ? ? ? 2 1 sample ? ? ? HIV-1 ? 'gag-pol, HIV-1 PR B' ? M:B_HXB2R ? ? ? ? 'Human immunodeficiency virus 1' 11706 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? 'BL21 DE3' ? ? ? ? ? ? ? 'pET 11a' ? ? ? ? ? ? # _pdbx_entity_src_syn.entity_id 3 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'This sequence corresponds to RT-RH cleavage site, naturally occuring in HIV-1 Gag-pol polyprotein.' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP POL_HV1H2 P04585 1 ;PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF ; 489 ? 2 UNP POL_HV1H2 P04585 2 ;PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF ; 489 ? 3 PDB 3MIM 3MIM 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3MIM A 1 ? 99 ? P04585 489 ? 587 ? 1 99 2 2 3MIM B 1 ? 99 ? P04585 489 ? 587 ? 1001 1099 3 3 3MIM X 1 ? 6 ? 3MIM 1 ? 6 ? 2 7 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3MIM MET A 95 ? UNP P04585 CYS 583 'ENGINEERED MUTATION' 95 1 2 3MIM ALA B 95 ? UNP P04585 CYS 583 'ENGINEERED MUTATION' 1095 2 2 3MIM GLY B 100 ? UNP P04585 ? ? 'EXPRESSION TAG' 1100 3 2 3MIM GLY B 101 ? UNP P04585 ? ? 'EXPRESSION TAG' 1101 4 2 3MIM SER B 102 ? UNP P04585 ? ? 'EXPRESSION TAG' 1102 5 2 3MIM SER B 103 ? UNP P04585 ? ? 'EXPRESSION TAG' 1103 6 2 3MIM GLY B 104 ? UNP P04585 ? ? 'EXPRESSION TAG' 1104 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 HPH peptide-like n '(2S)-2-amino-3-phenylpropane-1,1-diol' '(2S)-2-amino-3-phenylpropane-1,1-diol' 'C9 H13 N O2' 167.205 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3MIM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.04 _exptl_crystal.density_percent_sol 39.63 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.2 _exptl_crystal_grow.pdbx_details '0.1M phosphate-0.2M citrate buffer, amm. sulphate, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'A horizontally diffracting Si (111) monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97945 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97945 # _reflns.entry_id 3MIM _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F -3 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 1.76 _reflns.number_obs 17226 _reflns.number_all 18068 _reflns.percent_possible_obs 95.3 _reflns.pdbx_Rmerge_I_obs 0.072 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 21.76 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.76 _reflns_shell.d_res_low 1.81 _reflns_shell.percent_possible_all 88.5 _reflns_shell.Rmerge_I_obs 0.465 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.98 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3MIM _refine.ls_number_reflns_obs 16819 _refine.ls_number_reflns_all 18068 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.5 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.0 _refine.ls_d_res_high 1.76 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2228 _refine.ls_R_factor_R_free 0.2500 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 843 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 1LV1 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1588 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 194 _refine_hist.number_atoms_total 1782 _refine_hist.d_res_high 1.76 _refine_hist.d_res_low 50.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.012 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.99 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 3MIM _struct.title 'X-ray Snapshot of HIV-1 Protease in Action: Observation of Tetrahedral Intermediate and Its SIHB with Catalytic Aspartate' _struct.pdbx_descriptor 'Protease (E.C.3.4.23.16), peptide ET(PHD)YVD' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3MIM _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;HIV-1 protease, Short ionic hydrogen bond, tethered dimer, tetrahedral intermediate, Reverse Transcriptase-RNAseH oligopeptide substrate, Reaction Mechanism, HYDROLASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 86 ? THR A 91 ? GLY A 86 THR A 91 1 ? 6 HELX_P HELX_P2 2 GLN A 92 ? GLY A 94 ? GLN A 92 GLY A 94 5 ? 3 HELX_P HELX_P3 3 GLY B 86 ? THR B 91 ? GLY B 1086 THR B 1091 1 ? 6 HELX_P HELX_P4 4 GLN B 92 ? GLY B 94 ? GLN B 1092 GLY B 1094 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? C THR 2 C A ? ? 1_555 C HPH 3 N A ? X THR 3 X HPH 4 1_555 ? ? ? ? ? ? ? 1.330 ? covale2 covale ? ? C THR 2 C B ? ? 1_555 C HPH 3 N B ? X THR 3 X HPH 4 1_555 ? ? ? ? ? ? ? 1.324 ? covale3 covale ? ? C HPH 3 C A ? ? 1_555 C TYR 4 N A ? X HPH 4 X TYR 5 1_555 ? ? ? ? ? ? ? 1.451 ? covale4 covale ? ? C HPH 3 C B ? ? 1_555 C TYR 4 N B ? X HPH 4 X TYR 5 1_555 ? ? ? ? ? ? ? 1.421 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 8 ? C ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? parallel C 4 5 ? anti-parallel C 5 6 ? parallel C 6 7 ? anti-parallel C 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 2 ? THR A 4 ? GLN A 2 THR A 4 A 2 THR B 96 ? ASN B 98 ? THR B 1096 ASN B 1098 A 3 THR A 96 ? ASN A 98 ? THR A 96 ASN A 98 A 4 GLN B 2 ? THR B 4 ? GLN B 1002 THR B 1004 B 1 LYS A 43 ? GLY A 49 ? LYS A 43 GLY A 49 B 2 GLY A 52 ? ILE A 66 ? GLY A 52 ILE A 66 B 3 HIS A 69 ? VAL A 77 ? HIS A 69 VAL A 77 B 4 VAL A 32 ? LEU A 33 ? VAL A 32 LEU A 33 B 5 ILE A 84 ? ILE A 85 ? ILE A 84 ILE A 85 B 6 GLN A 18 ? LEU A 24 ? GLN A 18 LEU A 24 B 7 LEU A 10 ? ILE A 15 ? LEU A 10 ILE A 15 B 8 GLY A 52 ? ILE A 66 ? GLY A 52 ILE A 66 C 1 LYS B 43 ? GLY B 49 ? LYS B 1043 GLY B 1049 C 2 GLY B 52 ? ILE B 66 ? GLY B 1052 ILE B 1066 C 3 HIS B 69 ? VAL B 77 ? HIS B 1069 VAL B 1077 C 4 VAL B 32 ? LEU B 33 ? VAL B 1032 LEU B 1033 C 5 ILE B 84 ? ILE B 85 ? ILE B 1084 ILE B 1085 C 6 GLN B 18 ? LEU B 24 ? GLN B 1018 LEU B 1024 C 7 LEU B 10 ? ILE B 15 ? LEU B 1010 ILE B 1015 C 8 GLY B 52 ? ILE B 66 ? GLY B 1052 ILE B 1066 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 3 ? N VAL A 3 O LEU B 97 ? O LEU B 1097 A 2 3 O ASN B 98 ? O ASN B 1098 N THR A 96 ? N THR A 96 A 3 4 N LEU A 97 ? N LEU A 97 O VAL B 3 ? O VAL B 1003 B 1 2 N LYS A 45 ? N LYS A 45 O VAL A 56 ? O VAL A 56 B 2 3 N ILE A 66 ? N ILE A 66 O HIS A 69 ? O HIS A 69 B 3 4 O LEU A 76 ? O LEU A 76 N LEU A 33 ? N LEU A 33 B 4 5 N VAL A 32 ? N VAL A 32 O ILE A 84 ? O ILE A 84 B 5 6 O ILE A 85 ? O ILE A 85 N LEU A 23 ? N LEU A 23 B 6 7 O LYS A 20 ? O LYS A 20 N ILE A 13 ? N ILE A 13 B 7 8 N LYS A 14 ? N LYS A 14 O GLU A 65 ? O GLU A 65 C 1 2 N GLY B 49 ? N GLY B 1049 O GLY B 52 ? O GLY B 1052 C 2 3 N ILE B 66 ? N ILE B 1066 O HIS B 69 ? O HIS B 1069 C 3 4 O LEU B 76 ? O LEU B 1076 N LEU B 33 ? N LEU B 1033 C 4 5 N VAL B 32 ? N VAL B 1032 O ILE B 84 ? O ILE B 1084 C 5 6 O ILE B 85 ? O ILE B 1085 N LEU B 23 ? N LEU B 1023 C 6 7 O LYS B 20 ? O LYS B 1020 N ILE B 13 ? N ILE B 1013 C 7 8 N LYS B 14 ? N LYS B 1014 O GLU B 65 ? O GLU B 1065 # _database_PDB_matrix.entry_id 3MIM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3MIM _atom_sites.fract_transf_matrix[1][1] 0.015985 _atom_sites.fract_transf_matrix[1][2] 0.009229 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018457 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012216 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 TRP 6 6 6 TRP TRP A . n A 1 7 GLN 7 7 7 GLN GLN A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 MET 36 36 36 MET MET A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 TRP 42 42 42 TRP TRP A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 MET 46 46 46 MET MET A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 CYS 67 67 67 CYS CYS A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 HIS 69 69 69 HIS HIS A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 MET 95 95 95 MET MET A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 PHE 99 99 99 PHE PHE A . n B 2 1 PRO 1 1001 1001 PRO PRO B . n B 2 2 GLN 2 1002 1002 GLN GLN B . n B 2 3 VAL 3 1003 1003 VAL VAL B . n B 2 4 THR 4 1004 1004 THR THR B . n B 2 5 LEU 5 1005 1005 LEU LEU B . n B 2 6 TRP 6 1006 1006 TRP TRP B . n B 2 7 GLN 7 1007 1007 GLN GLN B . n B 2 8 ARG 8 1008 1008 ARG ARG B . n B 2 9 PRO 9 1009 1009 PRO PRO B . n B 2 10 LEU 10 1010 1010 LEU LEU B . n B 2 11 VAL 11 1011 1011 VAL VAL B . n B 2 12 THR 12 1012 1012 THR THR B . n B 2 13 ILE 13 1013 1013 ILE ILE B . n B 2 14 LYS 14 1014 1014 LYS LYS B . n B 2 15 ILE 15 1015 1015 ILE ILE B . n B 2 16 GLY 16 1016 1016 GLY GLY B . n B 2 17 GLY 17 1017 1017 GLY GLY B . n B 2 18 GLN 18 1018 1018 GLN GLN B . n B 2 19 LEU 19 1019 1019 LEU LEU B . n B 2 20 LYS 20 1020 1020 LYS LYS B . n B 2 21 GLU 21 1021 1021 GLU GLU B . n B 2 22 ALA 22 1022 1022 ALA ALA B . n B 2 23 LEU 23 1023 1023 LEU LEU B . n B 2 24 LEU 24 1024 1024 LEU LEU B . n B 2 25 ASP 25 1025 1025 ASP ASP B . n B 2 26 THR 26 1026 1026 THR THR B . n B 2 27 GLY 27 1027 1027 GLY GLY B . n B 2 28 ALA 28 1028 1028 ALA ALA B . n B 2 29 ASP 29 1029 1029 ASP ASP B . n B 2 30 ASP 30 1030 1030 ASP ASP B . n B 2 31 THR 31 1031 1031 THR THR B . n B 2 32 VAL 32 1032 1032 VAL VAL B . n B 2 33 LEU 33 1033 1033 LEU LEU B . n B 2 34 GLU 34 1034 1034 GLU GLU B . n B 2 35 GLU 35 1035 1035 GLU GLU B . n B 2 36 MET 36 1036 1036 MET MET B . n B 2 37 SER 37 1037 1037 SER SER B . n B 2 38 LEU 38 1038 1038 LEU LEU B . n B 2 39 PRO 39 1039 1039 PRO PRO B . n B 2 40 GLY 40 1040 1040 GLY GLY B . n B 2 41 ARG 41 1041 1041 ARG ARG B . n B 2 42 TRP 42 1042 1042 TRP TRP B . n B 2 43 LYS 43 1043 1043 LYS LYS B . n B 2 44 PRO 44 1044 1044 PRO PRO B . n B 2 45 LYS 45 1045 1045 LYS LYS B . n B 2 46 MET 46 1046 1046 MET MET B . n B 2 47 ILE 47 1047 1047 ILE ILE B . n B 2 48 GLY 48 1048 1048 GLY GLY B . n B 2 49 GLY 49 1049 1049 GLY GLY B . n B 2 50 ILE 50 1050 1050 ILE ILE B . n B 2 51 GLY 51 1051 1051 GLY GLY B . n B 2 52 GLY 52 1052 1052 GLY GLY B . n B 2 53 PHE 53 1053 1053 PHE PHE B . n B 2 54 ILE 54 1054 1054 ILE ILE B . n B 2 55 LYS 55 1055 1055 LYS LYS B . n B 2 56 VAL 56 1056 1056 VAL VAL B . n B 2 57 ARG 57 1057 1057 ARG ARG B . n B 2 58 GLN 58 1058 1058 GLN GLN B . n B 2 59 TYR 59 1059 1059 TYR TYR B . n B 2 60 ASP 60 1060 1060 ASP ASP B . n B 2 61 GLN 61 1061 1061 GLN GLN B . n B 2 62 ILE 62 1062 1062 ILE ILE B . n B 2 63 LEU 63 1063 1063 LEU LEU B . n B 2 64 ILE 64 1064 1064 ILE ILE B . n B 2 65 GLU 65 1065 1065 GLU GLU B . n B 2 66 ILE 66 1066 1066 ILE ILE B . n B 2 67 CYS 67 1067 1067 CYS CYS B . n B 2 68 GLY 68 1068 1068 GLY GLY B . n B 2 69 HIS 69 1069 1069 HIS HIS B . n B 2 70 LYS 70 1070 1070 LYS LYS B . n B 2 71 ALA 71 1071 1071 ALA ALA B . n B 2 72 ILE 72 1072 1072 ILE ILE B . n B 2 73 GLY 73 1073 1073 GLY GLY B . n B 2 74 THR 74 1074 1074 THR THR B . n B 2 75 VAL 75 1075 1075 VAL VAL B . n B 2 76 LEU 76 1076 1076 LEU LEU B . n B 2 77 VAL 77 1077 1077 VAL VAL B . n B 2 78 GLY 78 1078 1078 GLY GLY B . n B 2 79 PRO 79 1079 1079 PRO PRO B . n B 2 80 THR 80 1080 1080 THR THR B . n B 2 81 PRO 81 1081 1081 PRO PRO B . n B 2 82 VAL 82 1082 1082 VAL VAL B . n B 2 83 ASN 83 1083 1083 ASN ASN B . n B 2 84 ILE 84 1084 1084 ILE ILE B . n B 2 85 ILE 85 1085 1085 ILE ILE B . n B 2 86 GLY 86 1086 1086 GLY GLY B . n B 2 87 ARG 87 1087 1087 ARG ARG B . n B 2 88 ASN 88 1088 1088 ASN ASN B . n B 2 89 LEU 89 1089 1089 LEU LEU B . n B 2 90 LEU 90 1090 1090 LEU LEU B . n B 2 91 THR 91 1091 1091 THR THR B . n B 2 92 GLN 92 1092 1092 GLN GLN B . n B 2 93 ILE 93 1093 1093 ILE ILE B . n B 2 94 GLY 94 1094 1094 GLY GLY B . n B 2 95 ALA 95 1095 1095 ALA ALA B . n B 2 96 THR 96 1096 1096 THR THR B . n B 2 97 LEU 97 1097 1097 LEU LEU B . n B 2 98 ASN 98 1098 1098 ASN ASN B . n B 2 99 PHE 99 1099 1099 PHE PHE B . n B 2 100 GLY 100 1100 1100 GLY GLY B . n B 2 101 GLY 101 1101 1101 GLY GLY B . n B 2 102 SER 102 1102 1102 SER SER B . n B 2 103 SER 103 1103 1103 SER SER B . n B 2 104 GLY 104 1104 ? ? ? B . n C 3 1 GLU 1 2 2 GLU GLU X . n C 3 2 THR 2 3 3 THR THR X . n C 3 3 HPH 3 4 4 HPH PHD X . n C 3 4 TYR 4 5 5 TYR TYR X . n C 3 5 VAL 5 6 6 VAL VAL X . n C 3 6 ASP 6 7 7 ASP ASP X . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 HOH 1 100 100 HOH HOH A . D 4 HOH 2 101 1 HOH HOH A . D 4 HOH 3 102 4 HOH HOH A . D 4 HOH 4 103 5 HOH HOH A . D 4 HOH 5 104 7 HOH HOH A . D 4 HOH 6 105 8 HOH HOH A . D 4 HOH 7 106 16 HOH HOH A . D 4 HOH 8 107 18 HOH HOH A . D 4 HOH 9 108 22 HOH HOH A . D 4 HOH 10 109 24 HOH HOH A . D 4 HOH 11 110 25 HOH HOH A . D 4 HOH 12 111 26 HOH HOH A . D 4 HOH 13 112 29 HOH HOH A . D 4 HOH 14 113 30 HOH HOH A . D 4 HOH 15 114 32 HOH HOH A . D 4 HOH 16 115 34 HOH HOH A . D 4 HOH 17 116 35 HOH HOH A . D 4 HOH 18 117 40 HOH HOH A . D 4 HOH 19 118 43 HOH HOH A . D 4 HOH 20 119 44 HOH HOH A . D 4 HOH 21 120 47 HOH HOH A . D 4 HOH 22 121 48 HOH HOH A . D 4 HOH 23 122 122 HOH HOH A . D 4 HOH 24 123 123 HOH HOH A . D 4 HOH 25 124 50 HOH HOH A . D 4 HOH 26 125 94 HOH HOH A . D 4 HOH 27 126 52 HOH HOH A . D 4 HOH 28 127 127 HOH HOH A . D 4 HOH 29 128 56 HOH HOH A . D 4 HOH 30 129 58 HOH HOH A . D 4 HOH 31 130 59 HOH HOH A . D 4 HOH 32 131 60 HOH HOH A . D 4 HOH 33 132 61 HOH HOH A . D 4 HOH 34 133 133 HOH HOH A . D 4 HOH 35 134 62 HOH HOH A . D 4 HOH 36 135 64 HOH HOH A . D 4 HOH 37 136 136 HOH HOH A . D 4 HOH 38 137 137 HOH HOH A . D 4 HOH 39 138 138 HOH HOH A . D 4 HOH 40 139 67 HOH HOH A . D 4 HOH 41 140 71 HOH HOH A . D 4 HOH 42 141 141 HOH HOH A . D 4 HOH 43 142 89 HOH HOH A . D 4 HOH 44 143 143 HOH HOH A . D 4 HOH 45 144 97 HOH HOH A . D 4 HOH 46 145 102 HOH HOH A . D 4 HOH 47 146 146 HOH HOH A . D 4 HOH 48 147 2 HOH HOH A . D 4 HOH 49 148 119 HOH HOH A . D 4 HOH 50 149 149 HOH HOH A . D 4 HOH 51 150 142 HOH HOH A . D 4 HOH 52 151 151 HOH HOH A . D 4 HOH 53 152 152 HOH HOH A . D 4 HOH 54 153 153 HOH HOH A . D 4 HOH 55 154 7 HOH HOH A . D 4 HOH 56 155 155 HOH HOH A . D 4 HOH 57 156 156 HOH HOH A . D 4 HOH 58 157 157 HOH HOH A . D 4 HOH 59 158 158 HOH HOH A . D 4 HOH 60 159 8 HOH HOH A . D 4 HOH 61 160 160 HOH HOH A . D 4 HOH 62 161 9 HOH HOH A . D 4 HOH 63 162 10 HOH HOH A . D 4 HOH 64 163 75 HOH HOH A . D 4 HOH 65 164 12 HOH HOH A . D 4 HOH 66 165 14 HOH HOH A . D 4 HOH 67 166 15 HOH HOH A . D 4 HOH 68 167 16 HOH HOH A . D 4 HOH 69 168 17 HOH HOH A . D 4 HOH 70 169 22 HOH HOH A . D 4 HOH 71 170 23 HOH HOH A . D 4 HOH 72 171 24 HOH HOH A . D 4 HOH 73 172 29 HOH HOH A . D 4 HOH 74 173 43 HOH HOH A . D 4 HOH 75 174 44 HOH HOH A . D 4 HOH 76 176 49 HOH HOH A . D 4 HOH 77 177 52 HOH HOH A . D 4 HOH 78 178 71 HOH HOH A . D 4 HOH 79 180 73 HOH HOH A . D 4 HOH 80 182 75 HOH HOH A . D 4 HOH 81 183 76 HOH HOH A . D 4 HOH 82 184 77 HOH HOH A . D 4 HOH 83 185 78 HOH HOH A . D 4 HOH 84 186 79 HOH HOH A . D 4 HOH 85 187 80 HOH HOH A . D 4 HOH 86 188 81 HOH HOH A . D 4 HOH 87 189 82 HOH HOH A . D 4 HOH 88 190 84 HOH HOH A . D 4 HOH 89 191 85 HOH HOH A . E 4 HOH 1 3 3 HOH HOH B . E 4 HOH 2 6 6 HOH HOH B . E 4 HOH 3 10 10 HOH HOH B . E 4 HOH 4 11 11 HOH HOH B . E 4 HOH 5 12 12 HOH HOH B . E 4 HOH 6 13 13 HOH HOH B . E 4 HOH 7 14 14 HOH HOH B . E 4 HOH 8 15 15 HOH HOH B . E 4 HOH 9 17 17 HOH HOH B . E 4 HOH 10 19 19 HOH HOH B . E 4 HOH 11 20 20 HOH HOH B . E 4 HOH 12 21 21 HOH HOH B . E 4 HOH 13 23 23 HOH HOH B . E 4 HOH 14 25 25 HOH HOH B . E 4 HOH 15 26 26 HOH HOH B . E 4 HOH 16 27 27 HOH HOH B . E 4 HOH 17 28 28 HOH HOH B . E 4 HOH 18 30 30 HOH HOH B . E 4 HOH 19 31 31 HOH HOH B . E 4 HOH 20 32 32 HOH HOH B . E 4 HOH 21 33 33 HOH HOH B . E 4 HOH 22 34 34 HOH HOH B . E 4 HOH 23 36 36 HOH HOH B . E 4 HOH 24 37 37 HOH HOH B . E 4 HOH 25 39 39 HOH HOH B . E 4 HOH 26 40 40 HOH HOH B . E 4 HOH 27 42 42 HOH HOH B . E 4 HOH 28 45 45 HOH HOH B . E 4 HOH 29 46 46 HOH HOH B . E 4 HOH 30 47 47 HOH HOH B . E 4 HOH 31 49 49 HOH HOH B . E 4 HOH 32 50 50 HOH HOH B . E 4 HOH 33 51 51 HOH HOH B . E 4 HOH 34 53 53 HOH HOH B . E 4 HOH 35 55 55 HOH HOH B . E 4 HOH 36 57 57 HOH HOH B . E 4 HOH 37 58 58 HOH HOH B . E 4 HOH 38 59 59 HOH HOH B . E 4 HOH 39 60 60 HOH HOH B . E 4 HOH 40 61 61 HOH HOH B . E 4 HOH 41 62 62 HOH HOH B . E 4 HOH 42 63 63 HOH HOH B . E 4 HOH 43 65 65 HOH HOH B . E 4 HOH 44 66 66 HOH HOH B . E 4 HOH 45 70 70 HOH HOH B . E 4 HOH 46 72 72 HOH HOH B . E 4 HOH 47 90 90 HOH HOH B . E 4 HOH 48 91 91 HOH HOH B . E 4 HOH 49 92 92 HOH HOH B . E 4 HOH 50 93 93 HOH HOH B . E 4 HOH 51 95 95 HOH HOH B . E 4 HOH 52 96 96 HOH HOH B . E 4 HOH 53 101 101 HOH HOH B . E 4 HOH 54 105 105 HOH HOH B . E 4 HOH 55 106 106 HOH HOH B . E 4 HOH 56 107 107 HOH HOH B . E 4 HOH 57 109 109 HOH HOH B . E 4 HOH 58 111 111 HOH HOH B . E 4 HOH 59 113 113 HOH HOH B . E 4 HOH 60 114 114 HOH HOH B . E 4 HOH 61 115 115 HOH HOH B . E 4 HOH 62 116 116 HOH HOH B . E 4 HOH 63 120 120 HOH HOH B . E 4 HOH 64 124 124 HOH HOH B . E 4 HOH 65 125 125 HOH HOH B . E 4 HOH 66 126 126 HOH HOH B . E 4 HOH 67 128 128 HOH HOH B . E 4 HOH 68 129 129 HOH HOH B . E 4 HOH 69 130 130 HOH HOH B . E 4 HOH 70 134 134 HOH HOH B . E 4 HOH 71 135 135 HOH HOH B . E 4 HOH 72 139 139 HOH HOH B . E 4 HOH 73 140 140 HOH HOH B . E 4 HOH 74 145 1 HOH HOH B . E 4 HOH 75 148 4 HOH HOH B . E 4 HOH 76 150 6 HOH HOH B . E 4 HOH 77 154 154 HOH HOH B . E 4 HOH 78 161 161 HOH HOH B . E 4 HOH 79 163 11 HOH HOH B . E 4 HOH 80 175 48 HOH HOH B . E 4 HOH 81 179 72 HOH HOH B . E 4 HOH 82 181 74 HOH HOH B . E 4 HOH 83 1105 19 HOH HOH B . E 4 HOH 84 1106 21 HOH HOH B . E 4 HOH 85 1107 27 HOH HOH B . E 4 HOH 86 1108 28 HOH HOH B . E 4 HOH 87 1109 36 HOH HOH B . E 4 HOH 88 1110 39 HOH HOH B . E 4 HOH 89 1111 42 HOH HOH B . E 4 HOH 90 1112 45 HOH HOH B . E 4 HOH 91 1113 65 HOH HOH B . E 4 HOH 92 1114 66 HOH HOH B . E 4 HOH 93 1115 70 HOH HOH B . F 4 HOH 1 8 2 HOH HOH X . F 4 HOH 2 20 20 HOH HOH X . F 4 HOH 3 69 69 HOH HOH X . F 4 HOH 4 73 73 HOH HOH X . F 4 HOH 5 76 76 HOH HOH X . F 4 HOH 6 77 77 HOH HOH X . F 4 HOH 7 78 78 HOH HOH X . F 4 HOH 8 79 79 HOH HOH X . F 4 HOH 9 80 80 HOH HOH X . F 4 HOH 10 81 81 HOH HOH X . F 4 HOH 11 83 83 HOH HOH X . F 4 HOH 12 88 88 HOH HOH X . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id C _pdbx_struct_mod_residue.label_comp_id HPH _pdbx_struct_mod_residue.label_seq_id 3 _pdbx_struct_mod_residue.auth_asym_id X _pdbx_struct_mod_residue.auth_comp_id HPH _pdbx_struct_mod_residue.auth_seq_id 4 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id PHE _pdbx_struct_mod_residue.details '(2S)-2-AMINO-3-PHENYLPROPANE-1,1-DIOL' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5290 ? 1 MORE -32 ? 1 'SSA (A^2)' 9420 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-04-13 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 1 3 2018-03-07 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 4 'Structure model' repository Obsolete ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' Advisory 4 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' pdbx_database_PDB_obs_spr 3 4 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_pdbx_database_status.status_code' 3 4 'Structure model' '_pdbx_database_status.status_code_sf' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345 'data collection' CCD ? 1 CNS refinement . ? 2 XDS 'data reduction' . ? 3 XDS 'data scaling' . ? 4 CNS phasing . ? 5 # _pdbx_entry_details.entry_id 3MIM _pdbx_entry_details.sequence_details ;THE AUTHOR STATES THAT RESIDUE HPH X 4 IS L-PHENYLALANINE AND HYDRATED L-PHE RESIDUE HAVING TETRAHEDRAL CARBON CA AND THE O AND OXT ARE THE TWO HYDROXYL GROUPS ATTACHED TO THE CA IN CASE OF HPH. THUS THE BOND CONNECTING CA (HPH) TO N (TYR) IS NOT A PLANAR PEPTIDYL BOND. ; _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OXT X ASP 7 ? B O X HOH 20 ? ? 1.48 2 1 O A HOH 137 ? ? O A HOH 182 ? ? 1.51 3 1 O A HOH 133 ? ? O A HOH 184 ? ? 1.56 4 1 O A HOH 188 ? ? O A HOH 189 ? ? 1.58 5 1 O A HOH 112 ? ? O A HOH 160 ? ? 1.59 6 1 O A HOH 121 ? ? O A HOH 183 ? ? 1.59 7 1 O A HOH 155 ? ? O A HOH 190 ? ? 1.61 8 1 O A HOH 150 ? ? O A HOH 154 ? ? 1.65 9 1 O B HOH 175 ? ? O B HOH 181 ? ? 1.66 10 1 O B HOH 57 ? ? O B HOH 179 ? ? 1.70 11 1 O A HOH 162 ? ? O B HOH 57 ? ? 1.73 12 1 OXT X ASP 7 ? B O X HOH 83 ? ? 1.77 13 1 O X HOH 20 ? ? O X HOH 83 ? ? 1.79 14 1 O A HOH 162 ? ? O B HOH 179 ? ? 1.87 15 1 OE1 A GLU 35 ? ? O A HOH 189 ? ? 2.03 16 1 N A GLY 48 ? ? O X HOH 20 ? ? 2.05 17 1 C X ASP 7 ? B O X HOH 83 ? ? 2.08 18 1 O B SER 1102 ? ? O B HOH 33 ? ? 2.16 19 1 OD2 A ASP 25 ? ? O X HPH 4 ? B 2.18 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O B HOH 49 ? ? 1_555 O B HOH 135 ? ? 6_555 1.62 2 1 O B HOH 53 ? ? 1_555 O B HOH 61 ? ? 5_554 1.70 3 1 O B HOH 53 ? ? 1_555 O B HOH 92 ? ? 2_665 1.70 4 1 O B HOH 61 ? ? 1_555 O B HOH 92 ? ? 4_565 1.74 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 O X HPH 4 ? A C X HPH 4 ? A N X TYR 5 ? A 94.03 122.70 -28.67 1.60 Y 2 1 O X HPH 4 ? B C X HPH 4 ? B N X TYR 5 ? B 89.91 122.70 -32.79 1.60 Y 3 1 C X HPH 4 ? B N X TYR 5 ? B CA X TYR 5 ? B 145.21 121.70 23.51 2.50 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 79 ? ? -65.64 46.29 2 1 PRO B 1079 ? ? -66.34 46.16 3 1 SER B 1102 ? ? 75.60 -66.51 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 HPH X 4 ? A TYR X 5 ? A 106.73 2 1 HPH X 4 ? B TYR X 5 ? B 108.31 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 THR X 3 ? A -12.66 2 1 THR X 3 ? B -11.40 3 1 HPH X 4 ? A -40.96 4 1 HPH X 4 ? B -30.68 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id B _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLY _pdbx_unobs_or_zero_occ_residues.auth_seq_id 1104 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id B _pdbx_unobs_or_zero_occ_residues.label_comp_id GLY _pdbx_unobs_or_zero_occ_residues.label_seq_id 104 # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #