HEADER DE NOVO PROTEIN/DNA 12-APR-10 3MIS TITLE I-MSOI RE-DESIGNED FOR ALTERED DNA CLEAVAGE SPECIFICITY (-8G) COMPND MOL_ID: 1; COMPND 2 MOLECULE: MSO-8G; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (5'- COMPND 7 D(*GP*CP*AP*GP*GP*AP*CP*GP*TP*CP*GP*TP*GP*AP*GP*AP*CP*AP*GP*CP*TP*CP* COMPND 8 CP*G)-3'); COMPND 9 CHAIN: C; COMPND 10 ENGINEERED: YES; COMPND 11 OTHER_DETAILS: TOP STRAND OLIGONUCLEOTIDE TARGET; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (5'- COMPND 14 D(*CP*GP*GP*AP*GP*CP*TP*GP*TP*CP*TP*CP*AP*CP*GP*AP*CP*GP*TP*CP*CP*TP* COMPND 15 GP*C)-3'); COMPND 16 CHAIN: D; COMPND 17 ENGINEERED: YES; COMPND 18 OTHER_DETAILS: BOTTOM STRAND OLIGONUCLEOTIDE TARGET SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_COMMON: ARTIFICIAL GENE; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 STRAIN: OKE-1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET24D; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES KEYWDS PROTEIN-DNA COMPLEX, HOMING NUCLEASE, ROSETTA DESIGN, DE NOVO KEYWDS 2 PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR G.K.TAYLOR,B.L.STODDARD REVDAT 3 06-SEP-23 3MIS 1 REMARK LINK REVDAT 2 06-OCT-10 3MIS 1 JRNL REVDAT 1 19-MAY-10 3MIS 0 JRNL AUTH J.ASHWORTH,G.K.TAYLOR,J.J.HAVRANEK,S.A.QUADRI,B.L.STODDARD, JRNL AUTH 2 D.BAKER JRNL TITL COMPUTATIONAL REPROGRAMMING OF HOMING ENDONUCLEASE JRNL TITL 2 SPECIFICITY AT MULTIPLE ADJACENT BASE PAIRS. JRNL REF NUCLEIC ACIDS RES. V. 38 5601 2010 JRNL REFN ISSN 0305-1048 JRNL PMID 20435674 JRNL DOI 10.1093/NAR/GKQ283 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.25 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 18859 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.249 REMARK 3 R VALUE (WORKING SET) : 0.246 REMARK 3 FREE R VALUE : 0.308 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 980 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 23.2482 - 4.3913 0.00 2606 158 0.1758 0.2431 REMARK 3 2 4.3913 - 3.4893 0.00 2608 135 0.2217 0.2970 REMARK 3 3 3.4893 - 3.0494 0.00 2578 136 0.2584 0.3324 REMARK 3 4 3.0494 - 2.7710 0.00 2583 135 0.2996 0.3713 REMARK 3 5 2.7710 - 2.5727 0.00 2535 143 0.2959 0.3524 REMARK 3 6 2.5727 - 2.4212 0.00 2557 123 0.3054 0.3753 REMARK 3 7 2.4212 - 2.3000 0.00 2412 150 0.3046 0.3393 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.31 REMARK 3 B_SOL : 62.76 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.420 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3778 REMARK 3 ANGLE : 1.138 5304 REMARK 3 CHIRALITY : 0.061 586 REMARK 3 PLANARITY : 0.004 514 REMARK 3 DIHEDRAL : 21.646 1500 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): 4.7797 -12.9073 -8.0029 REMARK 3 T TENSOR REMARK 3 T11: 0.2123 T22: 0.2254 REMARK 3 T33: 0.4340 T12: 0.0434 REMARK 3 T13: -0.1057 T23: -0.0792 REMARK 3 L TENSOR REMARK 3 L11: 2.6711 L22: 3.5639 REMARK 3 L33: 8.2581 L12: -3.7839 REMARK 3 L13: 0.6752 L23: -4.0261 REMARK 3 S TENSOR REMARK 3 S11: 0.1581 S12: -0.1201 S13: 0.4156 REMARK 3 S21: -0.2392 S22: -0.2425 S23: -0.5596 REMARK 3 S31: 0.9353 S32: 1.0804 S33: 0.1500 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3MIS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-APR-10. REMARK 100 THE DEPOSITION ID IS D_1000058596. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 7.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : CONFOCAL VARIMAX OPTICS SYSTEMS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR REMARK 200 DATA SCALING SOFTWARE : CRYSTALCLEAR REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18927 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 23.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 200 DATA REDUNDANCY : 3.920 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.87 REMARK 200 R MERGE FOR SHELL (I) : 0.30700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 1M5X REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24% PEG 4000, 100MM TRIS, 20MM NACL, REMARK 280 5MM CACL2 , PH 7.3, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -91.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ILE B 61 O HOH B 176 2.08 REMARK 500 N GLN B 64 O HOH B 176 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG C -12 O4' - C1' - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 DA C -10 O4' - C1' - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 DA C 2 C3' - C2' - C1' ANGL. DEV. = -5.5 DEGREES REMARK 500 DA C 4 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 DG C 7 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC C 8 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DC C 10 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DA D -9 C3' - C2' - C1' ANGL. DEV. = -5.4 DEGREES REMARK 500 DA D -9 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 DG D -8 O4' - C1' - N9 ANGL. DEV. = 4.2 DEGREES REMARK 500 DG D -5 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DT D -4 O4' - C1' - N1 ANGL. DEV. = 4.3 DEGREES REMARK 500 DA D 1 O4' - C1' - N9 ANGL. DEV. = -5.0 DEGREES REMARK 500 DC D 2 C3' - C2' - C1' ANGL. DEV. = -5.6 DEGREES REMARK 500 DA D 4 O4' - C1' - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 DT D 7 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 36 -85.45 -75.91 REMARK 500 ASP A 37 -87.18 -74.81 REMARK 500 LYS A 39 41.10 -83.99 REMARK 500 ASP A 74 110.81 -167.74 REMARK 500 ARG A 102 -66.86 -120.54 REMARK 500 ASN A 142 33.46 -79.33 REMARK 500 ALA A 145 22.99 -79.33 REMARK 500 THR A 151 58.35 -163.52 REMARK 500 LYS A 162 3.08 -63.98 REMARK 500 LYS B 36 -100.48 -91.51 REMARK 500 ASP B 37 -84.41 -62.01 REMARK 500 LYS B 39 49.68 -92.68 REMARK 500 LEU B 65 31.16 -93.74 REMARK 500 ASP B 74 102.06 -169.37 REMARK 500 ASP B 77 35.10 -94.86 REMARK 500 ARG B 102 -64.54 -125.97 REMARK 500 ALA B 145 8.21 -65.74 REMARK 500 THR B 151 37.17 -152.28 REMARK 500 LYS B 162 38.83 -74.74 REMARK 500 ALA B 163 -3.96 -162.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 2 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 22 OD2 REMARK 620 2 ASP A 22 OD1 48.8 REMARK 620 3 HOH B 4 O 114.5 66.3 REMARK 620 4 GLY B 21 O 88.1 93.4 87.6 REMARK 620 5 DG C 3 OP2 89.5 137.5 149.8 74.5 REMARK 620 6 DC D 2 OP1 89.6 75.4 81.5 166.8 118.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 3 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 21 O REMARK 620 2 HOH B 5 O 88.4 REMARK 620 3 ASP B 22 OD1 92.8 74.0 REMARK 620 4 ASP B 22 OD2 83.6 120.8 48.1 REMARK 620 5 DA C 2 OP1 163.4 81.1 72.0 90.9 REMARK 620 6 DG D 3 OP2 76.0 141.6 140.4 92.5 120.0 REMARK 620 7 HOH D 48 O 102.9 63.0 133.3 172.9 83.7 86.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 13 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 22 OD2 REMARK 620 2 ASP B 22 OD2 107.1 REMARK 620 3 DA C 2 O3' 139.0 88.7 REMARK 620 4 DG C 3 OP2 88.5 99.0 51.2 REMARK 620 5 DC D 2 O3' 87.9 142.5 102.3 115.9 REMARK 620 6 DG D 3 OP2 104.3 90.9 113.2 160.8 51.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 13 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2KO2 RELATED DB: PDB REMARK 900 RELATED ID: 2MIP RELATED DB: PDB DBREF 3MIS A 6 166 PDB 3MIS 3MIS 6 166 DBREF 3MIS B 6 166 PDB 3MIS 3MIS 6 166 DBREF 3MIS C -12 12 PDB 3MIS 3MIS -12 12 DBREF 3MIS D -12 12 PDB 3MIS 3MIS -12 12 SEQRES 1 A 161 THR LEU GLN PRO THR GLU ALA ALA TYR ILE ALA GLY PHE SEQRES 2 A 161 LEU ASP GLY ASP GLY SER ILE TYR ALA LYS LEU GLU PRO SEQRES 3 A 161 ARG PRO ASP TYR LYS ASP ILE LYS TYR GLN VAL ARG LEU SEQRES 4 A 161 ALA ILE SER PHE ILE GLN ARG LYS ASP LYS PHE PRO TYR SEQRES 5 A 161 LEU GLN ASP ILE TYR ASP GLN LEU GLY LYS ARG GLY ASN SEQRES 6 A 161 LEU ARG LYS ASP ARG GLY ASP GLY ILE ALA ASP TYR THR SEQRES 7 A 161 ILE TYR GLY SER THR HIS LEU SER ILE ILE LEU PRO ASP SEQRES 8 A 161 LEU VAL PRO TYR LEU ARG ILE LYS LYS LYS GLN ALA ASN SEQRES 9 A 161 ARG ILE LEU HIS ILE ILE ASN LEU TYR PRO GLN ALA GLN SEQRES 10 A 161 LYS ASN PRO SER LYS PHE LEU ASP LEU VAL LYS ILE VAL SEQRES 11 A 161 ASP ASP VAL GLN ASN LEU ASN LYS ARG ALA ASP GLU LEU SEQRES 12 A 161 LYS SER THR ASN TYR ASP ARG LEU LEU GLU GLU PHE LEU SEQRES 13 A 161 LYS ALA GLY LYS ILE SEQRES 1 B 161 THR LEU GLN PRO THR GLU ALA ALA TYR ILE ALA GLY PHE SEQRES 2 B 161 LEU ASP GLY ASP GLY SER ILE TYR ALA LYS LEU GLU PRO SEQRES 3 B 161 ARG PRO ASP TYR LYS ASP ILE LYS TYR GLN VAL ARG LEU SEQRES 4 B 161 ALA ILE SER PHE ILE GLN ARG LYS ASP LYS PHE PRO TYR SEQRES 5 B 161 LEU GLN ASP ILE TYR ASP GLN LEU GLY LYS ARG GLY ASN SEQRES 6 B 161 LEU ARG LYS ASP ARG GLY ASP GLY ILE ALA ASP TYR THR SEQRES 7 B 161 ILE TYR GLY SER THR HIS LEU SER ILE ILE LEU PRO ASP SEQRES 8 B 161 LEU VAL PRO TYR LEU ARG ILE LYS LYS LYS GLN ALA ASN SEQRES 9 B 161 ARG ILE LEU HIS ILE ILE ASN LEU TYR PRO GLN ALA GLN SEQRES 10 B 161 LYS ASN PRO SER LYS PHE LEU ASP LEU VAL LYS ILE VAL SEQRES 11 B 161 ASP ASP VAL GLN ASN LEU ASN LYS ARG ALA ASP GLU LEU SEQRES 12 B 161 LYS SER THR ASN TYR ASP ARG LEU LEU GLU GLU PHE LEU SEQRES 13 B 161 LYS ALA GLY LYS ILE SEQRES 1 C 24 DG DC DA DG DG DA DC DG DT DC DG DT DG SEQRES 2 C 24 DA DG DA DC DA DG DC DT DC DC DG SEQRES 1 D 24 DC DG DG DA DG DC DT DG DT DC DT DC DA SEQRES 2 D 24 DC DG DA DC DG DT DC DC DT DG DC HET CA A 2 1 HET CA B 3 1 HET CA C 13 1 HETNAM CA CALCIUM ION FORMUL 5 CA 3(CA 2+) FORMUL 8 HOH *93(H2 O) HELIX 1 1 GLN A 8 ASP A 22 1 15 HELIX 2 2 LYS A 54 GLY A 66 1 13 HELIX 3 3 GLY A 86 VAL A 98 1 13 HELIX 4 4 PRO A 99 LEU A 101 5 3 HELIX 5 5 LYS A 104 GLN A 122 1 19 HELIX 6 6 ASN A 124 ASN A 142 1 19 HELIX 7 7 TYR A 153 LYS A 162 1 10 HELIX 8 8 GLN B 8 ASP B 22 1 15 HELIX 9 9 LYS B 54 GLN B 64 1 11 HELIX 10 10 GLY B 86 VAL B 98 1 13 HELIX 11 11 LYS B 104 TYR B 118 1 15 HELIX 12 12 PRO B 119 GLN B 122 5 4 HELIX 13 13 ASN B 124 ASN B 142 1 19 HELIX 14 14 THR B 151 LYS B 162 1 12 SHEET 1 A 4 GLY A 23 PRO A 31 0 SHEET 2 A 4 TYR A 40 ARG A 51 -1 O ARG A 43 N LYS A 28 SHEET 3 A 4 ILE A 79 TYR A 85 -1 O ILE A 84 N ILE A 46 SHEET 4 A 4 ASN A 70 ARG A 72 -1 N ARG A 72 O ASP A 81 SHEET 1 B 4 GLY B 23 PRO B 31 0 SHEET 2 B 4 TYR B 40 ARG B 51 -1 O ARG B 43 N LYS B 28 SHEET 3 B 4 ILE B 79 TYR B 85 -1 O ALA B 80 N GLN B 50 SHEET 4 B 4 ASN B 70 ARG B 72 -1 N ARG B 72 O ASP B 81 LINK CA CA A 2 OD2 ASP A 22 1555 1555 2.63 LINK CA CA A 2 OD1 ASP A 22 1555 1555 2.64 LINK CA CA A 2 O HOH B 4 1555 1555 2.73 LINK CA CA A 2 O GLY B 21 1555 1555 2.44 LINK CA CA A 2 OP2 DG C 3 1555 1555 2.29 LINK CA CA A 2 OP1 DC D 2 1555 1555 2.38 LINK O GLY A 21 CA CA B 3 1555 1555 2.51 LINK OD2 ASP A 22 CA CA C 13 1555 1555 2.56 LINK CA CA B 3 O HOH B 5 1555 1555 2.82 LINK CA CA B 3 OD1 ASP B 22 1555 1555 2.61 LINK CA CA B 3 OD2 ASP B 22 1555 1555 2.76 LINK CA CA B 3 OP1 DA C 2 1555 1555 2.41 LINK CA CA B 3 OP2 DG D 3 1555 1555 2.24 LINK CA CA B 3 O HOH D 48 1555 1555 2.50 LINK OD2 ASP B 22 CA CA C 13 1555 1555 2.56 LINK O3' DA C 2 CA CA C 13 1555 1555 3.15 LINK OP2 DG C 3 CA CA C 13 1555 1555 2.41 LINK CA CA C 13 O3' DC D 2 1555 1555 2.95 LINK CA CA C 13 OP2 DG D 3 1555 1555 2.54 SITE 1 AC1 6 ASP A 22 HOH B 4 GLY B 21 DG C 3 SITE 2 AC1 6 CA C 13 DC D 2 SITE 1 AC2 7 GLY A 21 HOH B 5 ASP B 22 DA C 2 SITE 2 AC2 7 CA C 13 DG D 3 HOH D 48 SITE 1 AC3 8 CA A 2 ASP A 22 CA B 3 ASP B 22 SITE 2 AC3 8 DA C 2 DG C 3 DC D 2 DG D 3 CRYST1 42.589 42.632 71.577 72.86 72.83 71.17 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023480 -0.008006 -0.005630 0.00000 SCALE2 0.000000 0.024783 -0.005604 0.00000 SCALE3 0.000000 0.000000 0.014992 0.00000