HEADER IMMUNE SYSTEM 12-APR-10 3MJ7 TITLE CRYSTAL STRUCTURE OF THE COMPLEX OF JAML AND COXSACKIE AND ADENOVIRUS TITLE 2 RECEPTOR, CAR COMPND MOL_ID: 1; COMPND 2 MOLECULE: JUNCTIONAL ADHESION MOLECULE-LIKE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: EXTRACELLULAR DOMAIN (UNP RESIDUES 21-280); COMPND 5 SYNONYM: DENDRITIC CELL-SPECIFIC PROTEIN CREA7, MCREA7; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR HOMOLOG; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: EXTRACELLULAR DOMAIN (UNP RESIDUES 18-236); COMPND 12 SYNONYM: CAR, MCAR; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: AMICA1, GM638, JAML; SOURCE 6 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FRUIT FLY; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMT/BIP/V5-HIS A; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 13 ORGANISM_COMMON: MOUSE; SOURCE 14 ORGANISM_TAXID: 10090; SOURCE 15 GENE: CAR, CXADR; SOURCE 16 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 17 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PBAC6 KEYWDS IMMUNOGLOBULIN TANDEM DOMAIN, IMMUNE RECEPTOR COMPLEX, CELL ADHESION, KEYWDS 2 CELL JUNCTION, GLYCOPROTEIN, IMMUNOGLOBULIN DOMAIN, MEMBRANE, KEYWDS 3 TRANSMEMBRANE, COSTIMULATION, PHOSPHOPROTEIN, RECEPTOR, SECRETED, KEYWDS 4 TIGHT JUNCTION, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR P.VERDINO,I.A.WILSON REVDAT 2 29-JUL-20 3MJ7 1 COMPND REMARK SEQADV HETNAM REVDAT 2 2 1 LINK SITE ATOM REVDAT 1 22-SEP-10 3MJ7 0 JRNL AUTH P.VERDINO,D.A.WITHERDEN,W.L.HAVRAN,I.A.WILSON JRNL TITL THE MOLECULAR INTERACTION OF CAR AND JAML RECRUITS THE JRNL TITL 2 CENTRAL CELL SIGNAL TRANSDUCER PI3K. JRNL REF SCIENCE V. 329 1210 2010 JRNL REFN ISSN 0036-8075 JRNL PMID 20813955 JRNL DOI 10.1126/SCIENCE.1187996 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.A.WITHERDEN,P.VERDINO,S.E.RIEDER,O.GARIJO,R.E.MILLS, REMARK 1 AUTH 2 L.TEYTON,W.H.FISCHER,I.A.WILSON,W.L.HAVRAN REMARK 1 TITL THE JUNCTIONAL ADHESION MOLECULE JAML IS A COSTIMULATORY REMARK 1 TITL 2 RECEPTOR FOR EPITHELIAL GAMMADELTA T CELL ACTIVATION. REMARK 1 REF SCIENCE V. 329 1205 2010 REMARK 1 REFN ISSN 0036-8075 REMARK 1 PMID 20813954 REMARK 1 DOI 10.1126/SCIENCE.1192698 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.4.0069 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.92 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 13927 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.227 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 729 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1000 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.06 REMARK 3 BIN R VALUE (WORKING SET) : 0.3390 REMARK 3 BIN FREE R VALUE SET COUNT : 54 REMARK 3 BIN FREE R VALUE : 0.4400 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3338 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 102 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.89000 REMARK 3 B22 (A**2) : 0.89000 REMARK 3 B33 (A**2) : -1.33000 REMARK 3 B12 (A**2) : 0.44000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 2.932 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.391 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.359 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 40.735 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.925 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.888 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3513 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2421 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4758 ; 1.261 ; 1.997 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5877 ; 1.000 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 413 ; 6.498 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 160 ;36.710 ;24.688 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 626 ;17.209 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;14.946 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 551 ; 0.060 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3758 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 660 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 89 ; 0.148 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 14 ; 0.132 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 45 ; 0.165 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.245 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2078 ; 0.980 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 844 ; 0.149 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3384 ; 1.976 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1435 ; 3.471 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1374 ; 5.724 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 11 A 121 REMARK 3 RESIDUE RANGE : A 401 A 501 REMARK 3 ORIGIN FOR THE GROUP (A): 15.4786 -23.3421 -3.5617 REMARK 3 T TENSOR REMARK 3 T11: -0.3588 T22: -0.1463 REMARK 3 T33: -0.3376 T12: -0.1023 REMARK 3 T13: -0.0560 T23: 0.0585 REMARK 3 L TENSOR REMARK 3 L11: 4.4564 L22: 4.8715 REMARK 3 L33: 6.1221 L12: 0.9923 REMARK 3 L13: -2.2903 L23: -0.6554 REMARK 3 S TENSOR REMARK 3 S11: 0.0547 S12: -0.3424 S13: 0.2055 REMARK 3 S21: -0.0650 S22: 0.1763 S23: 0.2132 REMARK 3 S31: -0.3231 S32: -0.7405 S33: -0.2310 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 122 A 239 REMARK 3 ORIGIN FOR THE GROUP (A): 36.9490 -5.0550 -10.6205 REMARK 3 T TENSOR REMARK 3 T11: 0.1437 T22: -0.2791 REMARK 3 T33: -0.2486 T12: -0.2865 REMARK 3 T13: -0.1061 T23: -0.0062 REMARK 3 L TENSOR REMARK 3 L11: 6.6756 L22: 3.3248 REMARK 3 L33: 5.6604 L12: 2.4503 REMARK 3 L13: -2.6630 L23: -1.2769 REMARK 3 S TENSOR REMARK 3 S11: 0.4787 S12: -0.6063 S13: 0.4532 REMARK 3 S21: 0.3139 S22: -0.3405 S23: -0.1205 REMARK 3 S31: -1.0413 S32: 0.4492 S33: -0.1382 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 120 REMARK 3 RESIDUE RANGE : B 301 B 302 REMARK 3 ORIGIN FOR THE GROUP (A): -2.0593 -37.8049 2.9744 REMARK 3 T TENSOR REMARK 3 T11: -0.4082 T22: 0.5348 REMARK 3 T33: -0.0574 T12: -0.2309 REMARK 3 T13: -0.0351 T23: 0.2841 REMARK 3 L TENSOR REMARK 3 L11: 4.2735 L22: 2.4418 REMARK 3 L33: 4.0191 L12: 0.9609 REMARK 3 L13: 1.3823 L23: -0.5280 REMARK 3 S TENSOR REMARK 3 S11: -0.0286 S12: -0.4694 S13: -0.0179 REMARK 3 S21: -0.2213 S22: 0.3641 S23: 0.5213 REMARK 3 S31: 0.2309 S32: -1.2365 S33: -0.3355 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 121 B 210 REMARK 3 ORIGIN FOR THE GROUP (A): -29.4149 -52.2047 -24.7645 REMARK 3 T TENSOR REMARK 3 T11: 0.1038 T22: 0.2935 REMARK 3 T33: 0.4264 T12: 0.1346 REMARK 3 T13: -0.0775 T23: -0.1252 REMARK 3 L TENSOR REMARK 3 L11: 7.9554 L22: 1.6137 REMARK 3 L33: 11.1319 L12: 1.6962 REMARK 3 L13: 4.8985 L23: -1.9125 REMARK 3 S TENSOR REMARK 3 S11: 0.0291 S12: -0.2623 S13: -0.0977 REMARK 3 S21: -0.3065 S22: -0.7984 S23: 0.3141 REMARK 3 S31: -0.4603 S32: -0.2748 S33: 0.7693 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3MJ7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-APR-10. REMARK 100 THE DEPOSITION ID IS D_1000058611. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-07 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03317 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL CRYO-COOLED REMARK 200 SI(111) REMARK 200 OPTICS : SI(111) DOUBLE CRYSTAL REMARK 200 MONOCHROMETER. ADJUSTABLE REMARK 200 FOCUSING MIRRORS IN K-B GEOMETRY REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14679 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : 0.09100 REMARK 200 FOR THE DATA SET : 12.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.52900 REMARK 200 R SYM FOR SHELL (I) : 0.52900 REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.25 M LI-SULFATE, 0.1 M MES, 24% PEG REMARK 280 3350, PH 6.00, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 1 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -Y,-X,-Z+2/3 REMARK 290 5555 -X+Y,Y,-Z+1/3 REMARK 290 6555 X,X-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.39000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 84.78000 REMARK 290 SMTRY1 4 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 84.78000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 42.39000 REMARK 290 SMTRY1 6 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A -1 REMARK 465 SER A 0 REMARK 465 GLN A 1 REMARK 465 GLY A 2 REMARK 465 LEU A 3 REMARK 465 PRO A 4 REMARK 465 GLY A 5 REMARK 465 LEU A 6 REMARK 465 THR A 7 REMARK 465 VAL A 8 REMARK 465 SER A 9 REMARK 465 SER A 10 REMARK 465 ARG A 240 REMARK 465 THR A 241 REMARK 465 ILE A 242 REMARK 465 SER A 243 REMARK 465 PRO A 244 REMARK 465 THR A 245 REMARK 465 PRO A 246 REMARK 465 PRO A 247 REMARK 465 THR A 248 REMARK 465 ASP A 249 REMARK 465 LYS A 250 REMARK 465 GLY A 251 REMARK 465 GLN A 252 REMARK 465 GLN A 253 REMARK 465 GLY A 254 REMARK 465 ILE A 255 REMARK 465 LEU A 256 REMARK 465 ASN A 257 REMARK 465 GLY A 258 REMARK 465 ASN A 259 REMARK 465 GLN A 260 REMARK 465 HIS A 261 REMARK 465 HIS A 262 REMARK 465 HIS A 263 REMARK 465 HIS A 264 REMARK 465 HIS A 265 REMARK 465 HIS A 266 REMARK 465 SER B -1 REMARK 465 GLY B 0 REMARK 465 LEU B 1 REMARK 465 SER B 2 REMARK 465 GLY B 131 REMARK 465 SER B 132 REMARK 465 GLU B 133 REMARK 465 GLU B 134 REMARK 465 ILE B 135 REMARK 465 LEU B 159 REMARK 465 SER B 160 REMARK 465 ASP B 161 REMARK 465 SER B 162 REMARK 465 GLN B 163 REMARK 465 THR B 164 REMARK 465 ALA B 183 REMARK 465 SER B 184 REMARK 465 SER B 185 REMARK 465 GLU B 186 REMARK 465 TYR B 187 REMARK 465 SER B 188 REMARK 465 GLY B 189 REMARK 465 THR B 190 REMARK 465 VAL B 211 REMARK 465 PRO B 212 REMARK 465 PRO B 213 REMARK 465 SER B 214 REMARK 465 ASN B 215 REMARK 465 ARG B 216 REMARK 465 ALA B 217 REMARK 465 HIS B 218 REMARK 465 HIS B 219 REMARK 465 HIS B 220 REMARK 465 HIS B 221 REMARK 465 HIS B 222 REMARK 465 HIS B 223 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 25 84.52 -154.40 REMARK 500 HIS A 79 54.21 -107.54 REMARK 500 SER A 156 138.27 177.42 REMARK 500 GLU A 162 -178.86 -66.58 REMARK 500 ARG A 174 -93.09 -69.55 REMARK 500 SER A 180 -60.24 -28.85 REMARK 500 PRO B 6 -172.23 -69.27 REMARK 500 GLU B 16 -163.74 -117.48 REMARK 500 SER B 43 17.51 47.38 REMARK 500 TYR B 65 73.59 57.30 REMARK 500 LYS B 69 108.58 -54.26 REMARK 500 SER B 81 -4.37 -57.69 REMARK 500 LYS B 146 127.20 -173.48 REMARK 500 MET B 173 -28.75 -38.43 REMARK 500 SER B 179 91.54 -68.28 REMARK 500 ASN B 197 -158.30 -124.05 REMARK 500 ASP B 202 148.45 -172.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3MJ6 RELATED DB: PDB REMARK 900 RELATED ID: 3MJ8 RELATED DB: PDB REMARK 900 RELATED ID: 3MJ9 RELATED DB: PDB DBREF 3MJ7 A 1 260 UNP Q80UL9 JAML1_MOUSE 21 280 DBREF 3MJ7 B -1 217 UNP P97792 CXAR_MOUSE 18 236 SEQADV 3MJ7 ARG A -1 UNP Q80UL9 EXPRESSION TAG SEQADV 3MJ7 SER A 0 UNP Q80UL9 EXPRESSION TAG SEQADV 3MJ7 ARG A 124 UNP Q80UL9 LYS 144 ENGINEERED MUTATION SEQADV 3MJ7 GLN A 211 UNP Q80UL9 ARG 231 ENGINEERED MUTATION SEQADV 3MJ7 HIS A 261 UNP Q80UL9 EXPRESSION TAG SEQADV 3MJ7 HIS A 262 UNP Q80UL9 EXPRESSION TAG SEQADV 3MJ7 HIS A 263 UNP Q80UL9 EXPRESSION TAG SEQADV 3MJ7 HIS A 264 UNP Q80UL9 EXPRESSION TAG SEQADV 3MJ7 HIS A 265 UNP Q80UL9 EXPRESSION TAG SEQADV 3MJ7 HIS A 266 UNP Q80UL9 EXPRESSION TAG SEQADV 3MJ7 HIS B 218 UNP P97792 EXPRESSION TAG SEQADV 3MJ7 HIS B 219 UNP P97792 EXPRESSION TAG SEQADV 3MJ7 HIS B 220 UNP P97792 EXPRESSION TAG SEQADV 3MJ7 HIS B 221 UNP P97792 EXPRESSION TAG SEQADV 3MJ7 HIS B 222 UNP P97792 EXPRESSION TAG SEQADV 3MJ7 HIS B 223 UNP P97792 EXPRESSION TAG SEQRES 1 A 268 ARG SER GLN GLY LEU PRO GLY LEU THR VAL SER SER PRO SEQRES 2 A 268 GLN LEU ARG VAL HIS VAL GLY GLU SER VAL LEU MET GLY SEQRES 3 A 268 CYS VAL VAL GLN ARG THR GLU GLU LYS HIS VAL ASP ARG SEQRES 4 A 268 VAL ASP TRP LEU PHE SER LYS ASP LYS ASP ASP ALA SER SEQRES 5 A 268 GLU TYR VAL LEU PHE TYR TYR SER ASN LEU SER VAL PRO SEQRES 6 A 268 THR GLY ARG PHE GLN ASN ARG SER HIS LEU VAL GLY ASP SEQRES 7 A 268 THR PHE HIS ASN ASP GLY SER LEU LEU LEU GLN ASP VAL SEQRES 8 A 268 GLN LYS ALA ASP GLU GLY ILE TYR THR CYS GLU ILE ARG SEQRES 9 A 268 LEU LYS ASN GLU SER MET VAL MET LYS LYS PRO VAL GLU SEQRES 10 A 268 LEU TRP VAL LEU PRO GLU GLU PRO ARG ASP LEU ARG VAL SEQRES 11 A 268 ARG VAL GLY ASP THR THR GLN MET ARG CYS SER ILE GLN SEQRES 12 A 268 SER THR GLU GLU LYS ARG VAL THR LYS VAL ASN TRP MET SEQRES 13 A 268 PHE SER SER GLY SER HIS THR GLU GLU GLU THR VAL LEU SEQRES 14 A 268 SER TYR ASP SER ASN MET ARG SER GLY LYS PHE GLN SER SEQRES 15 A 268 LEU GLY ARG PHE ARG ASN ARG VAL ASP LEU THR GLY ASP SEQRES 16 A 268 ILE SER ARG ASN ASP GLY SER ILE LYS LEU GLN THR VAL SEQRES 17 A 268 LYS GLU SER ASP GLN GLY ILE TYR THR CYS SER ILE TYR SEQRES 18 A 268 VAL GLY LYS LEU GLU SER ARG LYS THR ILE VAL LEU HIS SEQRES 19 A 268 VAL VAL GLN ASP GLU PHE GLN ARG THR ILE SER PRO THR SEQRES 20 A 268 PRO PRO THR ASP LYS GLY GLN GLN GLY ILE LEU ASN GLY SEQRES 21 A 268 ASN GLN HIS HIS HIS HIS HIS HIS SEQRES 1 B 225 SER GLY LEU SER ILE THR THR PRO GLU GLN ARG ILE GLU SEQRES 2 B 225 LYS ALA LYS GLY GLU THR ALA TYR LEU PRO CYS LYS PHE SEQRES 3 B 225 THR LEU SER PRO GLU ASP GLN GLY PRO LEU ASP ILE GLU SEQRES 4 B 225 TRP LEU ILE SER PRO SER ASP ASN GLN ILE VAL ASP GLN SEQRES 5 B 225 VAL ILE ILE LEU TYR SER GLY ASP LYS ILE TYR ASP ASN SEQRES 6 B 225 TYR TYR PRO ASP LEU LYS GLY ARG VAL HIS PHE THR SER SEQRES 7 B 225 ASN ASP VAL LYS SER GLY ASP ALA SER ILE ASN VAL THR SEQRES 8 B 225 ASN LEU GLN LEU SER ASP ILE GLY THR TYR GLN CYS LYS SEQRES 9 B 225 VAL LYS LYS ALA PRO GLY VAL ALA ASN LYS LYS PHE LEU SEQRES 10 B 225 LEU THR VAL LEU VAL LYS PRO SER GLY THR ARG CYS PHE SEQRES 11 B 225 VAL ASP GLY SER GLU GLU ILE GLY ASN ASP PHE LYS LEU SEQRES 12 B 225 LYS CYS GLU PRO LYS GLU GLY SER LEU PRO LEU GLN PHE SEQRES 13 B 225 GLU TRP GLN LYS LEU SER ASP SER GLN THR MET PRO THR SEQRES 14 B 225 PRO TRP LEU ALA GLU MET THR SER PRO VAL ILE SER VAL SEQRES 15 B 225 LYS ASN ALA SER SER GLU TYR SER GLY THR TYR SER CYS SEQRES 16 B 225 THR VAL GLN ASN ARG VAL GLY SER ASP GLN CYS MET LEU SEQRES 17 B 225 ARG LEU ASP VAL VAL PRO PRO SER ASN ARG ALA HIS HIS SEQRES 18 B 225 HIS HIS HIS HIS MODRES 3MJ7 ASN A 69 ASN GLYCOSYLATION SITE MODRES 3MJ7 ASN B 87 ASN GLYCOSYLATION SITE MODRES 3MJ7 ASN A 105 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET FUC C 5 10 HET NAG D 1 14 HET NAG D 2 14 HET NAG A 501 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE FORMUL 3 NAG 5(C8 H15 N O6) FORMUL 3 BMA C6 H12 O6 FORMUL 3 MAN C6 H12 O6 FORMUL 3 FUC C6 H12 O5 HELIX 1 1 GLY A 65 GLN A 68 5 4 HELIX 2 2 GLN A 90 GLU A 94 5 5 HELIX 3 3 ASP A 193 ASN A 197 5 5 HELIX 4 4 LYS A 207 GLN A 211 5 5 HELIX 5 5 TYR B 65 LYS B 69 5 5 HELIX 6 6 ASP B 78 GLY B 82 5 5 HELIX 7 7 GLN B 92 ASP B 95 5 4 HELIX 8 8 PRO B 166 MET B 173 5 8 SHEET 1 A 7 GLN A 12 HIS A 16 0 SHEET 2 A 7 MET A 108 LEU A 119 1 O LEU A 119 N VAL A 15 SHEET 3 A 7 VAL B 48 SER B 56 -1 O ASP B 49 N VAL A 109 SHEET 4 A 7 ASP B 35 PRO B 42 -1 N ILE B 40 O GLN B 50 SHEET 5 A 7 GLY B 97 LYS B 105 -1 O LYS B 104 N ASP B 35 SHEET 6 A 7 GLY B 108 LEU B 119 -1 O PHE B 114 N TYR B 99 SHEET 7 A 7 GLN B 8 ALA B 13 1 N GLN B 8 O LEU B 115 SHEET 1 B 7 LEU A 60 PRO A 63 0 SHEET 2 B 7 GLU A 51 TYR A 57 -1 N PHE A 55 O VAL A 62 SHEET 3 B 7 VAL A 35 SER A 43 -1 N TRP A 40 O VAL A 53 SHEET 4 B 7 GLY A 95 LEU A 103 -1 O ILE A 96 N SER A 43 SHEET 5 B 7 MET A 108 LEU A 119 -1 O MET A 110 N ILE A 101 SHEET 6 B 7 VAL B 48 SER B 56 -1 O ASP B 49 N VAL A 109 SHEET 7 B 7 LYS B 59 TYR B 61 -1 O LYS B 59 N SER B 56 SHEET 1 C 4 SER A 71 LEU A 73 0 SHEET 2 C 4 LEU A 84 LEU A 86 -1 O LEU A 85 N HIS A 72 SHEET 3 C 4 VAL A 21 MET A 23 -1 N VAL A 21 O LEU A 86 SHEET 4 C 4 GLN A 141 SER A 142 1 O GLN A 141 N LEU A 22 SHEET 1 D 6 ASP A 125 ARG A 129 0 SHEET 2 D 6 LEU A 223 VAL A 234 1 O HIS A 232 N LEU A 126 SHEET 3 D 6 GLY A 212 VAL A 220 -1 N TYR A 214 O ILE A 229 SHEET 4 D 6 LYS A 150 SER A 156 -1 N LYS A 150 O TYR A 219 SHEET 5 D 6 GLU A 164 ASP A 170 -1 O LEU A 167 N TRP A 153 SHEET 6 D 6 PHE A 178 GLN A 179 -1 O PHE A 178 N SER A 168 SHEET 1 E 3 THR A 134 MET A 136 0 SHEET 2 E 3 ILE A 201 LEU A 203 -1 O ILE A 201 N MET A 136 SHEET 3 E 3 VAL A 188 LEU A 190 -1 N ASP A 189 O LYS A 202 SHEET 1 F 3 ALA B 18 LEU B 20 0 SHEET 2 F 3 ILE B 86 VAL B 88 -1 O VAL B 88 N ALA B 18 SHEET 3 F 3 VAL B 72 PHE B 74 -1 N HIS B 73 O ASN B 87 SHEET 1 G 3 ARG B 126 VAL B 129 0 SHEET 2 G 3 LEU B 141 GLU B 144 -1 O GLU B 144 N ARG B 126 SHEET 3 G 3 VAL B 177 ILE B 178 -1 O ILE B 178 N LEU B 141 SHEET 1 H 2 GLN B 153 GLN B 157 0 SHEET 2 H 2 SER B 192 GLN B 196 -1 O GLN B 196 N GLN B 153 SSBOND 1 CYS A 25 CYS A 99 1555 1555 2.04 SSBOND 2 CYS A 138 CYS A 216 1555 1555 2.09 SSBOND 3 CYS B 22 CYS B 101 1555 1555 2.05 SSBOND 4 CYS B 127 CYS B 204 1555 1555 2.05 SSBOND 5 CYS B 143 CYS B 193 1555 1555 2.04 LINK ND2 ASN A 69 C1 NAG C 1 1555 1555 1.43 LINK ND2 ASN A 105 C1 NAG A 501 1555 1555 1.44 LINK ND2 ASN B 87 C1 NAG D 1 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O6 NAG C 1 C1 FUC C 5 1555 1555 1.45 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.43 LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.45 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.43 CISPEP 1 ALA B 106 PRO B 107 0 4.23 CISPEP 2 LYS B 146 GLU B 147 0 3.84 CISPEP 3 LEU B 150 PRO B 151 0 -0.61 CRYST1 89.865 89.865 127.170 90.00 90.00 120.00 P 31 1 2 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011128 0.006425 0.000000 0.00000 SCALE2 0.000000 0.012849 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007863 0.00000