HEADER OXYGEN STORAGE, OXYGEN TRANSPORT 13-APR-10 3MJP TITLE CRYSTAL STRUCTURE DETERMINATION OF JAPANESE QUAIL (COTURNIX COTURNIX TITLE 2 JAPONICA) HEMOGLOBIN AT 2.76 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMOGLOBIN SUBUNIT ALPHA-A; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: HEMOGLOBIN ALPHA-A CHAIN, ALPHA-A-GLOBIN; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HEMOGLOBIN SUBUNIT BETA; COMPND 7 CHAIN: B, D; COMPND 8 SYNONYM: HEMOGLOBIN BETA CHAIN, BETA-GLOBIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COTURNIX JAPONICA; SOURCE 3 ORGANISM_COMMON: JAPANESE QUAIL; SOURCE 4 ORGANISM_TAXID: 93934; SOURCE 5 TISSUE: BLOOD; SOURCE 6 CELL: RBC; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: COTURNIX JAPONICA; SOURCE 9 ORGANISM_COMMON: JAPANESE QUAIL; SOURCE 10 ORGANISM_TAXID: 93934; SOURCE 11 TISSUE: BLOOD; SOURCE 12 CELL: RBC KEYWDS AVIAN HEMOGLOBIN, HIGH OXYGEN AFFINITY, OXYGEN BINDING, OXYGEN KEYWDS 2 TRANSPORT, OXYGEN STORAGE EXPDTA X-RAY DIFFRACTION AUTHOR M.THENMOZHI,P.SATHYA MOORTHY,M.BALASUBRAMANIAN,M.N.PONNUSWAMY REVDAT 3 20-MAR-24 3MJP 1 REMARK LINK REVDAT 2 20-JUN-18 3MJP 1 AUTHOR JRNL REVDAT 1 08-DEC-10 3MJP 0 JRNL AUTH M.THENMOZHI,P.SATHYA MOORTHY,M.BALASUBRAMANIAN, JRNL AUTH 2 M.N.PONNUSWAMY JRNL TITL CRYSTAL STRUCTURE DETERMINATION OF JAPANESE QUAIL (COTURNIX JRNL TITL 2 COTURNIX JAPONICA) HEMOGLOBIN AT 2.76 ANGSTROM RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.54 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 81.6 REMARK 3 NUMBER OF REFLECTIONS : 11729 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.268 REMARK 3 R VALUE (WORKING SET) : 0.265 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1308 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.76 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.83 REMARK 3 REFLECTION IN BIN (WORKING SET) : 886 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 82.79 REMARK 3 BIN R VALUE (WORKING SET) : 0.4420 REMARK 3 BIN FREE R VALUE SET COUNT : 86 REMARK 3 BIN FREE R VALUE : 0.4760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4450 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 178 REMARK 3 SOLVENT ATOMS : 33 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.05000 REMARK 3 B22 (A**2) : -0.05000 REMARK 3 B33 (A**2) : 0.09000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.08000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.553 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.314 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 15.210 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.837 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.811 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4759 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6510 ; 1.862 ; 2.051 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 570 ; 7.779 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 190 ;39.815 ;23.789 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 754 ;25.818 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;17.889 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 712 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3564 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2852 ; 0.605 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4572 ; 1.090 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1907 ; 1.856 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1938 ; 2.856 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3MJP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-APR-10. REMARK 100 THE DEPOSITION ID IS D_1000058629. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOMAR REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11820 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.300 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 81.6 REMARK 200 DATA REDUNDANCY : 2.880 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.14350 REMARK 200 FOR THE DATA SET : 3.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.76 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.83 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.22010 REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 32% PEG 3350, 33MM SODIUM POTASSIUM REMARK 280 PHOSPHATE BUFFER, PH 6.7, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 48.71700 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 2 87.99 -164.55 REMARK 500 SER A 3 -159.32 -89.07 REMARK 500 ILE A 13 -26.65 -36.71 REMARK 500 ALA A 15 4.97 -61.44 REMARK 500 ALA A 18 -94.60 -2.29 REMARK 500 HIS A 20 24.88 -146.63 REMARK 500 GLU A 23 -21.62 -153.90 REMARK 500 GLU A 27 -70.83 -56.10 REMARK 500 ALA A 28 -65.13 -26.42 REMARK 500 HIS A 58 -75.44 -75.37 REMARK 500 ALA A 64 -31.25 -32.45 REMARK 500 HIS A 72 26.27 -160.19 REMARK 500 ASP A 74 -20.30 -37.93 REMARK 500 ASP A 75 68.37 -150.99 REMARK 500 SER A 84 -6.88 -57.53 REMARK 500 ARG A 92 89.29 50.68 REMARK 500 VAL A 96 1.63 -55.56 REMARK 500 LEU A 100 -12.46 -43.88 REMARK 500 CYS A 104 -6.09 -46.84 REMARK 500 VAL A 108 -73.08 -93.46 REMARK 500 VAL A 109 -60.48 -25.14 REMARK 500 LEU A 117 48.09 -90.04 REMARK 500 THR A 118 164.20 -43.73 REMARK 500 LYS A 127 -30.52 172.77 REMARK 500 THR A 137 46.67 -98.97 REMARK 500 ASN B 19 78.32 -65.66 REMARK 500 SER B 49 -52.33 -146.27 REMARK 500 ILE B 54 -36.88 -29.15 REMARK 500 ARG B 61 -1.75 -58.31 REMARK 500 ALA B 62 -58.89 -120.27 REMARK 500 SER B 70 -77.60 -34.43 REMARK 500 PHE B 71 -24.91 -36.53 REMARK 500 ASP B 73 -34.34 -32.96 REMARK 500 ALA B 74 -71.64 -74.08 REMARK 500 VAL B 75 -35.32 -22.60 REMARK 500 ASN B 80 32.85 -160.21 REMARK 500 LYS B 82 -68.70 -19.76 REMARK 500 LYS B 95 -76.32 -55.96 REMARK 500 HIS B 97 86.08 9.32 REMARK 500 THR B 119 -148.56 28.98 REMARK 500 LYS B 120 -7.66 -51.49 REMARK 500 CYS B 126 -85.60 -80.20 REMARK 500 GLN B 127 -49.58 -3.57 REMARK 500 LYS B 132 -36.54 -32.33 REMARK 500 LYS B 144 40.20 -81.41 REMARK 500 TYR B 145 -91.26 -125.39 REMARK 500 LYS C 7 8.34 -56.47 REMARK 500 ILE C 17 -110.09 -80.53 REMARK 500 ALA C 18 -42.04 61.92 REMARK 500 ALA C 21 -80.22 -24.74 REMARK 500 REMARK 500 THIS ENTRY HAS 95 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 150 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 87 NE2 REMARK 620 2 HEM A 150 NA 100.6 REMARK 620 3 HEM A 150 NB 91.7 92.3 REMARK 620 4 HEM A 150 NC 81.4 177.9 88.2 REMARK 620 5 HEM A 150 ND 90.7 84.5 176.3 95.0 REMARK 620 6 OXY A 151 O1 172.3 76.8 81.2 101.3 96.2 REMARK 620 7 OXY A 151 O2 151.1 108.2 90.4 69.8 88.9 33.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 150 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 92 NE2 REMARK 620 2 HEM B 150 NA 92.4 REMARK 620 3 HEM B 150 NB 92.4 94.5 REMARK 620 4 HEM B 150 NC 90.3 176.9 87.0 REMARK 620 5 HEM B 150 ND 91.8 86.3 175.8 92.0 REMARK 620 6 OXY B 151 O1 155.8 110.6 93.2 66.6 82.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM C 150 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 87 NE2 REMARK 620 2 HEM C 150 NA 85.3 REMARK 620 3 HEM C 150 NB 86.6 87.8 REMARK 620 4 HEM C 150 NC 93.7 178.9 91.6 REMARK 620 5 HEM C 150 ND 93.5 91.9 179.6 88.7 REMARK 620 6 OXY C 151 O2 164.0 78.8 94.5 102.2 85.3 REMARK 620 7 OXY C 151 O1 160.3 110.2 82.1 70.7 97.9 34.4 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 150 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OXY A 151 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM B 150 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OXY B 151 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM C 150 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OXY C 151 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM D 150 DBREF 3MJP A 1 141 UNP P24589 HBA_COTJA 2 142 DBREF 3MJP B 1 146 UNP P30893 HBB_COTJA 1 146 DBREF 3MJP C 1 141 UNP P24589 HBA_COTJA 2 142 DBREF 3MJP D 1 146 UNP P30893 HBB_COTJA 1 146 SEQRES 1 A 141 VAL LEU SER ALA ALA ASP LYS THR ASN VAL LYS GLY ILE SEQRES 2 A 141 PHE ALA LYS ILE ALA GLY HIS ALA GLU GLU TYR GLY ALA SEQRES 3 A 141 GLU ALA LEU ASP ARG MET PHE THR THR TYR PRO GLN THR SEQRES 4 A 141 LYS THR TYR PHE PRO HIS PHE ASP VAL SER HIS GLY SER SEQRES 5 A 141 ALA GLN ILE LYS GLY HIS GLY LYS LYS VAL ALA ALA ALA SEQRES 6 A 141 LEU VAL GLU ALA ALA ASN HIS ILE ASP ASP ILE ALA GLY SEQRES 7 A 141 THR LEU SER LYS LEU SER ASP LEU HIS ALA GLN LYS LEU SEQRES 8 A 141 ARG VAL ASP PRO VAL ASN PHE LYS LEU LEU GLY GLN CYS SEQRES 9 A 141 PHE LEU VAL VAL VAL ALA ILE HIS HIS PRO ALA ALA LEU SEQRES 10 A 141 THR PRO GLU VAL HIS ALA SER LEU ASP LYS PHE LEU CYS SEQRES 11 A 141 ALA VAL GLY THR VAL LEU THR ALA LYS TYR ARG SEQRES 1 B 146 VAL HIS TRP SER ALA GLU GLU LYS GLN LEU ILE THR GLY SEQRES 2 B 146 LEU TRP GLY LYS VAL ASN VAL ALA GLU CYS GLY ALA GLU SEQRES 3 B 146 ALA LEU ALA ARG LEU LEU ILE VAL TYR PRO TRP THR GLN SEQRES 4 B 146 ARG PHE PHE ALA SER PHE GLY ASN LEU SER SER PRO THR SEQRES 5 B 146 ALA ILE LEU GLY ASN PRO MET VAL ARG ALA HIS GLY LYS SEQRES 6 B 146 LYS VAL LEU THR SER PHE GLY ASP ALA VAL LYS ASN LEU SEQRES 7 B 146 ASP ASN ILE LYS ASN THR PHE SER GLN LEU SER GLU LEU SEQRES 8 B 146 HIS CYS ASP LYS LEU HIS VAL ASP PRO GLU ASN PHE ARG SEQRES 9 B 146 LEU LEU GLY ASP ILE LEU ILE ILE VAL LEU ALA ALA HIS SEQRES 10 B 146 PHE THR LYS ASP PHE THR PRO GLU CYS GLN ALA ALA TRP SEQRES 11 B 146 GLN LYS LEU VAL ARG VAL VAL ALA HIS ALA LEU ALA ARG SEQRES 12 B 146 LYS TYR HIS SEQRES 1 C 141 VAL LEU SER ALA ALA ASP LYS THR ASN VAL LYS GLY ILE SEQRES 2 C 141 PHE ALA LYS ILE ALA GLY HIS ALA GLU GLU TYR GLY ALA SEQRES 3 C 141 GLU ALA LEU ASP ARG MET PHE THR THR TYR PRO GLN THR SEQRES 4 C 141 LYS THR TYR PHE PRO HIS PHE ASP VAL SER HIS GLY SER SEQRES 5 C 141 ALA GLN ILE LYS GLY HIS GLY LYS LYS VAL ALA ALA ALA SEQRES 6 C 141 LEU VAL GLU ALA ALA ASN HIS ILE ASP ASP ILE ALA GLY SEQRES 7 C 141 THR LEU SER LYS LEU SER ASP LEU HIS ALA GLN LYS LEU SEQRES 8 C 141 ARG VAL ASP PRO VAL ASN PHE LYS LEU LEU GLY GLN CYS SEQRES 9 C 141 PHE LEU VAL VAL VAL ALA ILE HIS HIS PRO ALA ALA LEU SEQRES 10 C 141 THR PRO GLU VAL HIS ALA SER LEU ASP LYS PHE LEU CYS SEQRES 11 C 141 ALA VAL GLY THR VAL LEU THR ALA LYS TYR ARG SEQRES 1 D 146 VAL HIS TRP SER ALA GLU GLU LYS GLN LEU ILE THR GLY SEQRES 2 D 146 LEU TRP GLY LYS VAL ASN VAL ALA GLU CYS GLY ALA GLU SEQRES 3 D 146 ALA LEU ALA ARG LEU LEU ILE VAL TYR PRO TRP THR GLN SEQRES 4 D 146 ARG PHE PHE ALA SER PHE GLY ASN LEU SER SER PRO THR SEQRES 5 D 146 ALA ILE LEU GLY ASN PRO MET VAL ARG ALA HIS GLY LYS SEQRES 6 D 146 LYS VAL LEU THR SER PHE GLY ASP ALA VAL LYS ASN LEU SEQRES 7 D 146 ASP ASN ILE LYS ASN THR PHE SER GLN LEU SER GLU LEU SEQRES 8 D 146 HIS CYS ASP LYS LEU HIS VAL ASP PRO GLU ASN PHE ARG SEQRES 9 D 146 LEU LEU GLY ASP ILE LEU ILE ILE VAL LEU ALA ALA HIS SEQRES 10 D 146 PHE THR LYS ASP PHE THR PRO GLU CYS GLN ALA ALA TRP SEQRES 11 D 146 GLN LYS LEU VAL ARG VAL VAL ALA HIS ALA LEU ALA ARG SEQRES 12 D 146 LYS TYR HIS HET HEM A 150 43 HET OXY A 151 2 HET HEM B 150 43 HET OXY B 151 2 HET HEM C 150 43 HET OXY C 151 2 HET HEM D 150 43 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM OXY OXYGEN MOLECULE HETSYN HEM HEME FORMUL 5 HEM 4(C34 H32 FE N4 O4) FORMUL 6 OXY 3(O2) FORMUL 12 HOH *33(H2 O) HELIX 1 1 SER A 3 ALA A 18 1 16 HELIX 2 2 HIS A 20 PHE A 33 1 14 HELIX 3 3 GLN A 38 PHE A 43 5 6 HELIX 4 4 SER A 52 ALA A 65 1 14 HELIX 5 5 ALA A 69 ASP A 74 5 6 HELIX 6 6 ASP A 75 LEU A 80 1 6 HELIX 7 7 LYS A 82 HIS A 87 1 6 HELIX 8 8 PRO A 95 GLN A 103 1 9 HELIX 9 9 PHE A 105 HIS A 113 1 9 HELIX 10 10 THR A 118 LEU A 129 1 12 HELIX 11 11 CYS A 130 THR A 137 1 8 HELIX 12 12 GLU B 6 GLY B 16 1 11 HELIX 13 13 ASN B 19 TYR B 35 1 17 HELIX 14 14 PRO B 36 GLY B 46 5 11 HELIX 15 15 THR B 52 ASN B 57 1 6 HELIX 16 16 MET B 59 LYS B 76 1 18 HELIX 17 17 ASN B 80 ASP B 94 1 15 HELIX 18 18 PRO B 100 ALA B 116 1 17 HELIX 19 19 HIS B 117 PHE B 122 5 6 HELIX 20 20 THR B 123 LEU B 141 1 19 HELIX 21 21 ALA C 5 ILE C 17 1 13 HELIX 22 22 HIS C 20 ARG C 31 1 12 HELIX 23 23 TYR C 36 PHE C 43 5 8 HELIX 24 24 SER C 52 HIS C 72 1 21 HELIX 25 25 ASP C 75 LEU C 80 1 6 HELIX 26 26 LYS C 82 LYS C 90 1 9 HELIX 27 27 ASP C 94 VAL C 96 5 3 HELIX 28 28 ASN C 97 HIS C 113 1 17 HELIX 29 29 THR C 118 THR C 137 1 20 HELIX 30 30 SER D 4 GLY D 16 1 13 HELIX 31 31 ASN D 19 TYR D 35 1 17 HELIX 32 32 PRO D 36 ARG D 40 5 5 HELIX 33 33 PHE D 42 GLY D 46 5 5 HELIX 34 34 SER D 50 ASN D 57 1 8 HELIX 35 35 ASN D 57 ASN D 77 1 21 HELIX 36 36 ASN D 80 CYS D 93 1 14 HELIX 37 37 PRO D 100 THR D 119 1 20 HELIX 38 38 LYS D 120 PHE D 122 5 3 HELIX 39 39 THR D 123 LEU D 141 1 19 LINK NE2 HIS A 87 FE HEM A 150 1555 1555 2.40 LINK FE HEM A 150 O1 OXY A 151 1555 1555 1.94 LINK FE HEM A 150 O2 OXY A 151 1555 1555 2.20 LINK NE2 HIS B 92 FE HEM B 150 1555 1555 1.89 LINK FE HEM B 150 O1 OXY B 151 1555 1555 2.53 LINK NE2 HIS C 87 FE HEM C 150 1555 1555 2.14 LINK FE HEM C 150 O2 OXY C 151 1555 1555 1.83 LINK FE HEM C 150 O1 OXY C 151 1555 1555 2.12 SITE 1 AC1 14 TYR A 42 PHE A 43 HIS A 45 PHE A 46 SITE 2 AC1 14 LYS A 61 LEU A 66 LEU A 83 LEU A 86 SITE 3 AC1 14 HIS A 87 VAL A 93 ASN A 97 LEU A 101 SITE 4 AC1 14 LEU A 136 OXY A 151 SITE 1 AC2 3 HIS A 58 VAL A 62 HEM A 150 SITE 1 AC3 9 PHE B 41 PHE B 42 LYS B 66 SER B 70 SITE 2 AC3 9 PHE B 71 HIS B 92 ASN B 102 LEU B 141 SITE 3 AC3 9 OXY B 151 SITE 1 AC4 4 PHE B 42 HIS B 63 VAL B 67 HEM B 150 SITE 1 AC5 12 TYR C 42 PHE C 43 HIS C 45 HIS C 58 SITE 2 AC5 12 LYS C 61 VAL C 62 HIS C 87 VAL C 93 SITE 3 AC5 12 ASN C 97 PHE C 98 VAL C 132 OXY C 151 SITE 1 AC6 2 HIS C 58 HEM C 150 SITE 1 AC7 10 PHE D 41 PHE D 42 HIS D 63 SER D 70 SITE 2 AC7 10 LEU D 88 HIS D 92 LEU D 96 VAL D 98 SITE 3 AC7 10 ASN D 102 LEU D 141 CRYST1 62.090 97.434 61.705 90.00 123.10 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016106 0.000000 0.010498 0.00000 SCALE2 0.000000 0.010263 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019345 0.00000