HEADER LIGASE/CELL CYCLE 15-APR-10 3MKS TITLE CRYSTAL STRUCTURE OF YEAST CDC4/SKP1 IN COMPLEX WITH AN ALLOSTERIC TITLE 2 INHIBITOR SCF-I2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUPPRESSOR OF KINETOCHORE PROTEIN 1; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: UNP RESIDUES 2-194 WITH 37-64 DELETED; COMPND 5 SYNONYM: CENTROMERE DNA-BINDING PROTEIN COMPLEX CBF3 SUBUNIT D, E3 COMPND 6 UBIQUITIN LIGASE COMPLEX SCF SUBUNIT SKP1; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: CELL DIVISION CONTROL PROTEIN 4; COMPND 10 CHAIN: B, D; COMPND 11 FRAGMENT: UNP RESIDUES 263-744 WITH 602-605 AND 609-624 DELETED; COMPND 12 SYNONYM: F-BOX PROTEIN CDC4, E3 UBIQUITIN LIGASE COMPLEX SCF SUBUNIT COMPND 13 CDC4; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BREWER'S YEAST,LAGER BEER YEAST,YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: SKP1, CBF3D, YDR328C, D9798.14; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)CODON PLUS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPROEX; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 13 ORGANISM_COMMON: BREWER'S YEAST,LAGER BEER YEAST,YEAST; SOURCE 14 ORGANISM_TAXID: 4932; SOURCE 15 GENE: CDC4, YFL009W; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)CODON PLUS; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PPROEX KEYWDS UBIQUITIN LIGASE, PROTEIN BINDING, SMALL MOLECULE COMPLEX, KEYWDS 2 LIGASE/CELL CYCLE, LIGASE-CELL CYCLE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.ORLICKY,F.SICHERI,M.TYERS,X.TANG REVDAT 3 06-SEP-23 3MKS 1 REMARK SEQADV REVDAT 2 17-JUL-19 3MKS 1 REMARK REVDAT 1 21-JUL-10 3MKS 0 JRNL AUTH S.ORLICKY,X.TANG,V.NEDUVA,N.ELOWE,E.D.BROWN,F.SICHERI, JRNL AUTH 2 M.TYERS JRNL TITL AN ALLOSTERIC INHIBITOR OF SUBSTRATE RECOGNITION BY THE JRNL TITL 2 SCF(CDC4) UBIQUITIN LIGASE. JRNL REF NAT.BIOTECHNOL. V. 28 733 2010 JRNL REFN ISSN 1087-0156 JRNL PMID 20581844 JRNL DOI 10.1038/NBT.1646 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 93.66 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 63268 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3375 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4731 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3010 REMARK 3 BIN FREE R VALUE SET COUNT : 241 REMARK 3 BIN FREE R VALUE : 0.4070 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9329 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 87 REMARK 3 SOLVENT ATOMS : 40 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.86000 REMARK 3 B22 (A**2) : 1.86000 REMARK 3 B33 (A**2) : -2.79000 REMARK 3 B12 (A**2) : 0.93000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.340 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.273 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.214 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 21.478 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.932 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.894 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 9605 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 13003 ; 1.968 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1145 ; 7.468 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 447 ;35.318 ;23.781 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1700 ;21.010 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 63 ;22.370 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1448 ; 0.126 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7133 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5735 ; 0.784 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 9306 ; 1.479 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3870 ; 2.422 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3697 ; 3.836 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 185 REMARK 3 ORIGIN FOR THE GROUP (A): 113.4496 -29.4947 -58.3148 REMARK 3 T TENSOR REMARK 3 T11: 0.4125 T22: 0.0807 REMARK 3 T33: 0.1738 T12: -0.0359 REMARK 3 T13: -0.1688 T23: -0.0440 REMARK 3 L TENSOR REMARK 3 L11: 2.1411 L22: 9.1106 REMARK 3 L33: 6.8485 L12: -1.0844 REMARK 3 L13: -0.8484 L23: 5.6650 REMARK 3 S TENSOR REMARK 3 S11: 0.1236 S12: -0.0570 S13: 0.1844 REMARK 3 S21: 0.4072 S22: -0.0836 S23: 0.0387 REMARK 3 S31: 0.2446 S32: 0.1441 S33: -0.0400 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 270 B 744 REMARK 3 ORIGIN FOR THE GROUP (A): 118.9011 17.1824 -62.3966 REMARK 3 T TENSOR REMARK 3 T11: 0.0473 T22: 0.2060 REMARK 3 T33: 0.1839 T12: -0.0268 REMARK 3 T13: 0.0606 T23: -0.0142 REMARK 3 L TENSOR REMARK 3 L11: 0.9292 L22: 2.6324 REMARK 3 L33: 1.5379 L12: -0.2855 REMARK 3 L13: 0.1937 L23: 0.2845 REMARK 3 S TENSOR REMARK 3 S11: 0.1217 S12: 0.1678 S13: 0.1622 REMARK 3 S21: -0.1278 S22: -0.0482 S23: -0.4416 REMARK 3 S31: -0.1759 S32: 0.3553 S33: -0.0734 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 4 C 186 REMARK 3 ORIGIN FOR THE GROUP (A): 139.3187 13.3690 -30.3781 REMARK 3 T TENSOR REMARK 3 T11: 0.0554 T22: 0.2103 REMARK 3 T33: 0.0404 T12: 0.0036 REMARK 3 T13: 0.0144 T23: 0.0290 REMARK 3 L TENSOR REMARK 3 L11: 2.7313 L22: 4.3555 REMARK 3 L33: 5.5958 L12: 2.4580 REMARK 3 L13: 2.4498 L23: 2.7480 REMARK 3 S TENSOR REMARK 3 S11: -0.1702 S12: 0.3812 S13: 0.0062 REMARK 3 S21: -0.4570 S22: 0.2319 S23: -0.1098 REMARK 3 S31: -0.1945 S32: 0.1945 S33: -0.0616 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 269 D 744 REMARK 3 ORIGIN FOR THE GROUP (A): 182.4517 27.7759 -35.5226 REMARK 3 T TENSOR REMARK 3 T11: 0.0563 T22: 0.0852 REMARK 3 T33: 0.0511 T12: 0.0009 REMARK 3 T13: -0.0267 T23: 0.0186 REMARK 3 L TENSOR REMARK 3 L11: 2.7421 L22: 0.0788 REMARK 3 L33: 1.2295 L12: -0.2725 REMARK 3 L13: -0.9887 L23: 0.1804 REMARK 3 S TENSOR REMARK 3 S11: -0.0002 S12: -0.3559 S13: 0.0649 REMARK 3 S21: 0.0182 S22: 0.0084 S23: -0.0488 REMARK 3 S31: -0.0824 S32: 0.1768 S33: -0.0082 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3MKS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-APR-10. REMARK 100 THE DEPOSITION ID IS D_1000058668. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-APR-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : SI(111) DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR, BENT CYLINDRICAL REMARK 200 SI MIRROR (RH COATING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66846 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 93.660 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.43500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1NEX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 M AMMONIUM SULFATE, 100MM TRIS PH REMARK 280 8.5, 15% GLYCEROL, 1MM SCF-I2, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 110.39600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 55.19800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -88.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -84.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 ALA A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 THR A 3 REMARK 465 LEU A 61 REMARK 465 ASN A 62 REMARK 465 ASP A 63 REMARK 465 MET A 64 REMARK 465 GLY A 65 REMARK 465 ASP A 66 REMARK 465 ASP A 67 REMARK 465 ASP A 68 REMARK 465 ASP A 69 REMARK 465 GLU A 70 REMARK 465 ASP A 71 REMARK 465 ASP A 72 REMARK 465 ASP A 73 REMARK 465 GLU A 105 REMARK 465 ASP A 106 REMARK 465 ASP A 107 REMARK 465 ASP A 108 REMARK 465 ASP A 109 REMARK 465 SER A 110 REMARK 465 ARG A 111 REMARK 465 ARG A 186 REMARK 465 GLU A 187 REMARK 465 ASN A 188 REMARK 465 GLU A 189 REMARK 465 TRP A 190 REMARK 465 ALA A 191 REMARK 465 GLU A 192 REMARK 465 ASP A 193 REMARK 465 ARG A 194 REMARK 465 GLY B 261 REMARK 465 ALA B 262 REMARK 465 GLY B 263 REMARK 465 THR B 264 REMARK 465 LEU B 265 REMARK 465 ILE B 266 REMARK 465 LYS B 267 REMARK 465 ASP B 268 REMARK 465 ASN B 269 REMARK 465 GLU B 497 REMARK 465 SER B 498 REMARK 465 SER B 499 REMARK 465 VAL B 500 REMARK 465 PRO B 501 REMARK 465 ASP B 502 REMARK 465 HIS B 503 REMARK 465 GLY B 504 REMARK 465 GLU B 505 REMARK 465 GLU B 506 REMARK 465 HIS B 507 REMARK 465 GLY C -2 REMARK 465 ALA C -1 REMARK 465 HIS C 0 REMARK 465 MET C 1 REMARK 465 VAL C 2 REMARK 465 THR C 3 REMARK 465 ASP C 63 REMARK 465 MET C 64 REMARK 465 GLY C 65 REMARK 465 ASP C 66 REMARK 465 ASP C 67 REMARK 465 ASP C 68 REMARK 465 ASP C 69 REMARK 465 GLU C 70 REMARK 465 ASP C 71 REMARK 465 ASP C 72 REMARK 465 ASP C 73 REMARK 465 GLU C 74 REMARK 465 ASP C 104 REMARK 465 GLU C 105 REMARK 465 ASP C 106 REMARK 465 ASP C 107 REMARK 465 ASP C 108 REMARK 465 ASP C 109 REMARK 465 SER C 110 REMARK 465 ARG C 111 REMARK 465 LYS C 112 REMARK 465 SER C 113 REMARK 465 ALA C 114 REMARK 465 GLU C 187 REMARK 465 ASN C 188 REMARK 465 GLU C 189 REMARK 465 TRP C 190 REMARK 465 ALA C 191 REMARK 465 GLU C 192 REMARK 465 ASP C 193 REMARK 465 ARG C 194 REMARK 465 GLY D 261 REMARK 465 ALA D 262 REMARK 465 GLY D 263 REMARK 465 THR D 264 REMARK 465 LEU D 265 REMARK 465 ILE D 266 REMARK 465 LYS D 267 REMARK 465 ASP D 268 REMARK 465 SER D 498 REMARK 465 SER D 499 REMARK 465 VAL D 500 REMARK 465 PRO D 501 REMARK 465 ASP D 502 REMARK 465 HIS D 503 REMARK 465 GLY D 504 REMARK 465 GLU D 505 REMARK 465 GLU D 506 REMARK 465 HIS D 507 REMARK 465 ASP D 508 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU C 156 CG GLU C 156 CD 0.132 REMARK 500 PHE D 721 CZ PHE D 721 CE2 0.119 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP B 273 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG B 378 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ASP B 408 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 PRO B 510 C - N - CA ANGL. DEV. = -11.5 DEGREES REMARK 500 LEU C 141 CA - CB - CG ANGL. DEV. = 15.0 DEGREES REMARK 500 ARG C 167 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 PRO D 343 C - N - CA ANGL. DEV. = -9.2 DEGREES REMARK 500 LEU D 356 CB - CG - CD1 ANGL. DEV. = -11.8 DEGREES REMARK 500 ASP D 408 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 VAL D 536 CB - CA - C ANGL. DEV. = -11.9 DEGREES REMARK 500 ASP D 571 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP D 571 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 MET D 590 CG - SD - CE ANGL. DEV. = 10.2 DEGREES REMARK 500 LEU D 673 CA - CB - CG ANGL. DEV. = -14.5 DEGREES REMARK 500 VAL D 681 CB - CA - C ANGL. DEV. = -13.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 75 111.33 77.40 REMARK 500 VAL A 79 75.95 -118.57 REMARK 500 ASP A 99 53.93 -110.60 REMARK 500 PRO A 103 -159.85 -48.86 REMARK 500 ALA A 114 106.98 -55.57 REMARK 500 ILE A 143 79.13 -107.89 REMARK 500 ASN A 174 97.30 -64.52 REMARK 500 PRO A 178 -36.59 -39.88 REMARK 500 ALA A 182 -4.88 -58.39 REMARK 500 ALA A 183 -3.19 -55.89 REMARK 500 LYS B 271 -168.42 -124.31 REMARK 500 VAL B 301 -41.15 -136.84 REMARK 500 ASP B 401 3.64 -69.80 REMARK 500 LYS B 402 -7.21 87.68 REMARK 500 HIS B 462 112.62 158.30 REMARK 500 LEU B 469 148.77 -174.00 REMARK 500 TYR B 474 128.24 -179.94 REMARK 500 ASN B 476 30.59 12.19 REMARK 500 ARG B 485 7.30 -58.38 REMARK 500 ASN B 487 -13.06 86.56 REMARK 500 VAL B 523 -71.15 -86.71 REMARK 500 ASN B 550 -4.91 73.86 REMARK 500 ASP B 571 174.69 179.23 REMARK 500 THR B 592 -12.33 106.51 REMARK 500 ASN B 605 -19.44 104.79 REMARK 500 MET B 625 -61.91 -100.95 REMARK 500 THR B 632 31.79 -94.23 REMARK 500 ASN B 660 -61.05 -107.91 REMARK 500 PHE B 666 149.91 -176.11 REMARK 500 LYS B 711 -40.52 -23.09 REMARK 500 LEU C 33 -80.95 -138.79 REMARK 500 ARG C 98 -32.39 -31.75 REMARK 500 VAL C 116 170.17 54.72 REMARK 500 SER C 118 -47.66 -131.36 REMARK 500 ASN C 142 63.74 60.35 REMARK 500 LEU D 270 31.71 -77.03 REMARK 500 LYS D 329 39.04 -94.95 REMARK 500 LYS D 402 11.49 81.47 REMARK 500 LYS D 475 44.71 39.14 REMARK 500 ASN D 487 -24.38 97.27 REMARK 500 LYS D 496 -74.21 -105.70 REMARK 500 ASN D 550 20.62 81.66 REMARK 500 ASP D 591 -6.78 -58.99 REMARK 500 THR D 592 10.18 91.15 REMARK 500 GLN D 629 148.17 -173.70 REMARK 500 HIS D 631 -32.47 103.95 REMARK 500 ALA D 650 20.16 -78.16 REMARK 500 LEU D 673 41.52 -80.03 REMARK 500 THR D 678 147.01 -170.54 REMARK 500 SER D 690 -169.02 -160.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TYR D 509 PRO D 510 -132.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C1C D 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 8 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 9 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 10 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 11 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 745 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1NEX RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE UNIPROT ENTRY FOR CDC4_YEAST INDICATES THAT K460E EXISTS AS A REMARK 999 CONFLICT AND IS PRESENT IN THIS ENTRY DBREF 3MKS A 2 194 UNP P52286 SKP1_YEAST 2 194 DBREF 3MKS B 263 744 UNP P07834 CDC4_YEAST 263 744 DBREF 3MKS C 2 194 UNP P52286 SKP1_YEAST 2 194 DBREF 3MKS D 263 744 UNP P07834 CDC4_YEAST 263 744 SEQADV 3MKS GLY A -2 UNP P52286 EXPRESSION TAG SEQADV 3MKS ALA A -1 UNP P52286 EXPRESSION TAG SEQADV 3MKS HIS A 0 UNP P52286 EXPRESSION TAG SEQADV 3MKS MET A 1 UNP P52286 EXPRESSION TAG SEQADV 3MKS A UNP P52286 HIS 37 DELETION SEQADV 3MKS A UNP P52286 ASP 38 DELETION SEQADV 3MKS A UNP P52286 SER 39 DELETION SEQADV 3MKS A UNP P52286 ASN 40 DELETION SEQADV 3MKS A UNP P52286 LEU 41 DELETION SEQADV 3MKS A UNP P52286 GLN 42 DELETION SEQADV 3MKS A UNP P52286 ASN 43 DELETION SEQADV 3MKS A UNP P52286 ASN 44 DELETION SEQADV 3MKS A UNP P52286 SER 45 DELETION SEQADV 3MKS A UNP P52286 ASP 46 DELETION SEQADV 3MKS A UNP P52286 SER 47 DELETION SEQADV 3MKS A UNP P52286 GLU 48 DELETION SEQADV 3MKS A UNP P52286 SER 49 DELETION SEQADV 3MKS A UNP P52286 ASP 50 DELETION SEQADV 3MKS A UNP P52286 SER 51 DELETION SEQADV 3MKS A UNP P52286 ASP 52 DELETION SEQADV 3MKS A UNP P52286 SER 53 DELETION SEQADV 3MKS A UNP P52286 GLU 54 DELETION SEQADV 3MKS A UNP P52286 THR 55 DELETION SEQADV 3MKS A UNP P52286 ASN 56 DELETION SEQADV 3MKS A UNP P52286 HIS 57 DELETION SEQADV 3MKS A UNP P52286 LYS 58 DELETION SEQADV 3MKS A UNP P52286 SER 59 DELETION SEQADV 3MKS A UNP P52286 LYS 60 DELETION SEQADV 3MKS A UNP P52286 ASP 61 DELETION SEQADV 3MKS A UNP P52286 ASN 62 DELETION SEQADV 3MKS A UNP P52286 ASN 63 DELETION SEQADV 3MKS A UNP P52286 ASN 64 DELETION SEQADV 3MKS GLY B 261 UNP P07834 EXPRESSION TAG SEQADV 3MKS ALA B 262 UNP P07834 EXPRESSION TAG SEQADV 3MKS GLU B 460 UNP P07834 LYS 460 SEE REMARK 999 SEQADV 3MKS B UNP P07834 ASN 601 DELETION SEQADV 3MKS B UNP P07834 ILE 602 DELETION SEQADV 3MKS B UNP P07834 TRP 603 DELETION SEQADV 3MKS B UNP P07834 ASN 604 DELETION SEQADV 3MKS B UNP P07834 CYS 608 DELETION SEQADV 3MKS B UNP P07834 SER 609 DELETION SEQADV 3MKS B UNP P07834 TYR 610 DELETION SEQADV 3MKS B UNP P07834 ALA 611 DELETION SEQADV 3MKS B UNP P07834 THR 612 DELETION SEQADV 3MKS B UNP P07834 ASN 613 DELETION SEQADV 3MKS B UNP P07834 SER 614 DELETION SEQADV 3MKS B UNP P07834 ALA 615 DELETION SEQADV 3MKS B UNP P07834 SER 616 DELETION SEQADV 3MKS B UNP P07834 PRO 617 DELETION SEQADV 3MKS B UNP P07834 CYS 618 DELETION SEQADV 3MKS B UNP P07834 ALA 619 DELETION SEQADV 3MKS B UNP P07834 LYS 620 DELETION SEQADV 3MKS B UNP P07834 ILE 621 DELETION SEQADV 3MKS B UNP P07834 GLY 623 DELETION SEQADV 3MKS B UNP P07834 ALA 624 DELETION SEQADV 3MKS GLY C -2 UNP P52286 EXPRESSION TAG SEQADV 3MKS ALA C -1 UNP P52286 EXPRESSION TAG SEQADV 3MKS HIS C 0 UNP P52286 EXPRESSION TAG SEQADV 3MKS MET C 1 UNP P52286 EXPRESSION TAG SEQADV 3MKS C UNP P52286 HIS 37 DELETION SEQADV 3MKS C UNP P52286 ASP 38 DELETION SEQADV 3MKS C UNP P52286 SER 39 DELETION SEQADV 3MKS C UNP P52286 ASN 40 DELETION SEQADV 3MKS C UNP P52286 LEU 41 DELETION SEQADV 3MKS C UNP P52286 GLN 42 DELETION SEQADV 3MKS C UNP P52286 ASN 43 DELETION SEQADV 3MKS C UNP P52286 ASN 44 DELETION SEQADV 3MKS C UNP P52286 SER 45 DELETION SEQADV 3MKS C UNP P52286 ASP 46 DELETION SEQADV 3MKS C UNP P52286 SER 47 DELETION SEQADV 3MKS C UNP P52286 GLU 48 DELETION SEQADV 3MKS C UNP P52286 SER 49 DELETION SEQADV 3MKS C UNP P52286 ASP 50 DELETION SEQADV 3MKS C UNP P52286 SER 51 DELETION SEQADV 3MKS C UNP P52286 ASP 52 DELETION SEQADV 3MKS C UNP P52286 SER 53 DELETION SEQADV 3MKS C UNP P52286 GLU 54 DELETION SEQADV 3MKS C UNP P52286 THR 55 DELETION SEQADV 3MKS C UNP P52286 ASN 56 DELETION SEQADV 3MKS C UNP P52286 HIS 57 DELETION SEQADV 3MKS C UNP P52286 LYS 58 DELETION SEQADV 3MKS C UNP P52286 SER 59 DELETION SEQADV 3MKS C UNP P52286 LYS 60 DELETION SEQADV 3MKS C UNP P52286 ASP 61 DELETION SEQADV 3MKS C UNP P52286 ASN 62 DELETION SEQADV 3MKS C UNP P52286 ASN 63 DELETION SEQADV 3MKS C UNP P52286 ASN 64 DELETION SEQADV 3MKS GLY D 261 UNP P07834 EXPRESSION TAG SEQADV 3MKS ALA D 262 UNP P07834 EXPRESSION TAG SEQADV 3MKS GLU D 460 UNP P07834 LYS 460 SEE REMARK 999 SEQADV 3MKS D UNP P07834 ASN 601 DELETION SEQADV 3MKS D UNP P07834 ILE 602 DELETION SEQADV 3MKS D UNP P07834 TRP 603 DELETION SEQADV 3MKS D UNP P07834 ASN 604 DELETION SEQADV 3MKS D UNP P07834 CYS 608 DELETION SEQADV 3MKS D UNP P07834 SER 609 DELETION SEQADV 3MKS D UNP P07834 TYR 610 DELETION SEQADV 3MKS D UNP P07834 ALA 611 DELETION SEQADV 3MKS D UNP P07834 THR 612 DELETION SEQADV 3MKS D UNP P07834 ASN 613 DELETION SEQADV 3MKS D UNP P07834 SER 614 DELETION SEQADV 3MKS D UNP P07834 ALA 615 DELETION SEQADV 3MKS D UNP P07834 SER 616 DELETION SEQADV 3MKS D UNP P07834 PRO 617 DELETION SEQADV 3MKS D UNP P07834 CYS 618 DELETION SEQADV 3MKS D UNP P07834 ALA 619 DELETION SEQADV 3MKS D UNP P07834 LYS 620 DELETION SEQADV 3MKS D UNP P07834 ILE 621 DELETION SEQADV 3MKS D UNP P07834 GLY 623 DELETION SEQADV 3MKS D UNP P07834 ALA 624 DELETION SEQRES 1 A 169 GLY ALA HIS MET VAL THR SER ASN VAL VAL LEU VAL SER SEQRES 2 A 169 GLY GLU GLY GLU ARG PHE THR VAL ASP LYS LYS ILE ALA SEQRES 3 A 169 GLU ARG SER LEU LEU LEU LYS ASN TYR LEU ASN ASP MET SEQRES 4 A 169 GLY ASP ASP ASP ASP GLU ASP ASP ASP GLU ILE VAL MET SEQRES 5 A 169 PRO VAL PRO ASN VAL ARG SER SER VAL LEU GLN LYS VAL SEQRES 6 A 169 ILE GLU TRP ALA GLU HIS HIS ARG ASP SER ASN PHE PRO SEQRES 7 A 169 ASP GLU ASP ASP ASP ASP SER ARG LYS SER ALA PRO VAL SEQRES 8 A 169 ASP SER TRP ASP ARG GLU PHE LEU LYS VAL ASP GLN GLU SEQRES 9 A 169 MET LEU TYR GLU ILE ILE LEU ALA ALA ASN TYR LEU ASN SEQRES 10 A 169 ILE LYS PRO LEU LEU ASP ALA GLY CYS LYS VAL VAL ALA SEQRES 11 A 169 GLU MET ILE ARG GLY ARG SER PRO GLU GLU ILE ARG ARG SEQRES 12 A 169 THR PHE ASN ILE VAL ASN ASP PHE THR PRO GLU GLU GLU SEQRES 13 A 169 ALA ALA ILE ARG ARG GLU ASN GLU TRP ALA GLU ASP ARG SEQRES 1 B 464 GLY ALA GLY THR LEU ILE LYS ASP ASN LEU LYS ARG ASP SEQRES 2 B 464 LEU ILE THR SER LEU PRO PHE GLU ILE SER LEU LYS ILE SEQRES 3 B 464 PHE ASN TYR LEU GLN PHE GLU ASP ILE ILE ASN SER LEU SEQRES 4 B 464 GLY VAL SER GLN ASN TRP ASN LYS ILE ILE ARG LYS SER SEQRES 5 B 464 THR SER LEU TRP LYS LYS LEU LEU ILE SER GLU ASN PHE SEQRES 6 B 464 VAL SER PRO LYS GLY PHE ASN SER LEU ASN LEU LYS LEU SEQRES 7 B 464 SER GLN LYS TYR PRO LYS LEU SER GLN GLN ASP ARG LEU SEQRES 8 B 464 ARG LEU SER PHE LEU GLU ASN ILE PHE ILE LEU LYS ASN SEQRES 9 B 464 TRP TYR ASN PRO LYS PHE VAL PRO GLN ARG THR THR LEU SEQRES 10 B 464 ARG GLY HIS MET THR SER VAL ILE THR CYS LEU GLN PHE SEQRES 11 B 464 GLU ASP ASN TYR VAL ILE THR GLY ALA ASP ASP LYS MET SEQRES 12 B 464 ILE ARG VAL TYR ASP SER ILE ASN LYS LYS PHE LEU LEU SEQRES 13 B 464 GLN LEU SER GLY HIS ASP GLY GLY VAL TRP ALA LEU LYS SEQRES 14 B 464 TYR ALA HIS GLY GLY ILE LEU VAL SER GLY SER THR ASP SEQRES 15 B 464 ARG THR VAL ARG VAL TRP ASP ILE LYS LYS GLY CYS CYS SEQRES 16 B 464 THR HIS VAL PHE GLU GLY HIS ASN SER THR VAL ARG CYS SEQRES 17 B 464 LEU ASP ILE VAL GLU TYR LYS ASN ILE LYS TYR ILE VAL SEQRES 18 B 464 THR GLY SER ARG ASP ASN THR LEU HIS VAL TRP LYS LEU SEQRES 19 B 464 PRO LYS GLU SER SER VAL PRO ASP HIS GLY GLU GLU HIS SEQRES 20 B 464 ASP TYR PRO LEU VAL PHE HIS THR PRO GLU GLU ASN PRO SEQRES 21 B 464 TYR PHE VAL GLY VAL LEU ARG GLY HIS MET ALA SER VAL SEQRES 22 B 464 ARG THR VAL SER GLY HIS GLY ASN ILE VAL VAL SER GLY SEQRES 23 B 464 SER TYR ASP ASN THR LEU ILE VAL TRP ASP VAL ALA GLN SEQRES 24 B 464 MET LYS CYS LEU TYR ILE LEU SER GLY HIS THR ASP ARG SEQRES 25 B 464 ILE TYR SER THR ILE TYR ASP HIS GLU ARG LYS ARG CYS SEQRES 26 B 464 ILE SER ALA SER MET ASP THR THR ILE ARG ILE TRP ASP SEQRES 27 B 464 LEU GLU ASN GLY GLU LEU MET TYR THR LEU GLN GLY HIS SEQRES 28 B 464 THR ALA LEU VAL GLY LEU LEU ARG LEU SER ASP LYS PHE SEQRES 29 B 464 LEU VAL SER ALA ALA ALA ASP GLY SER ILE ARG GLY TRP SEQRES 30 B 464 ASP ALA ASN ASP TYR SER ARG LYS PHE SER TYR HIS HIS SEQRES 31 B 464 THR ASN LEU SER ALA ILE THR THR PHE TYR VAL SER ASP SEQRES 32 B 464 ASN ILE LEU VAL SER GLY SER GLU ASN GLN PHE ASN ILE SEQRES 33 B 464 TYR ASN LEU ARG SER GLY LYS LEU VAL HIS ALA ASN ILE SEQRES 34 B 464 LEU LYS ASP ALA ASP GLN ILE TRP SER VAL ASN PHE LYS SEQRES 35 B 464 GLY LYS THR LEU VAL ALA ALA VAL GLU LYS ASP GLY GLN SEQRES 36 B 464 SER PHE LEU GLU ILE LEU ASP PHE SER SEQRES 1 C 169 GLY ALA HIS MET VAL THR SER ASN VAL VAL LEU VAL SER SEQRES 2 C 169 GLY GLU GLY GLU ARG PHE THR VAL ASP LYS LYS ILE ALA SEQRES 3 C 169 GLU ARG SER LEU LEU LEU LYS ASN TYR LEU ASN ASP MET SEQRES 4 C 169 GLY ASP ASP ASP ASP GLU ASP ASP ASP GLU ILE VAL MET SEQRES 5 C 169 PRO VAL PRO ASN VAL ARG SER SER VAL LEU GLN LYS VAL SEQRES 6 C 169 ILE GLU TRP ALA GLU HIS HIS ARG ASP SER ASN PHE PRO SEQRES 7 C 169 ASP GLU ASP ASP ASP ASP SER ARG LYS SER ALA PRO VAL SEQRES 8 C 169 ASP SER TRP ASP ARG GLU PHE LEU LYS VAL ASP GLN GLU SEQRES 9 C 169 MET LEU TYR GLU ILE ILE LEU ALA ALA ASN TYR LEU ASN SEQRES 10 C 169 ILE LYS PRO LEU LEU ASP ALA GLY CYS LYS VAL VAL ALA SEQRES 11 C 169 GLU MET ILE ARG GLY ARG SER PRO GLU GLU ILE ARG ARG SEQRES 12 C 169 THR PHE ASN ILE VAL ASN ASP PHE THR PRO GLU GLU GLU SEQRES 13 C 169 ALA ALA ILE ARG ARG GLU ASN GLU TRP ALA GLU ASP ARG SEQRES 1 D 464 GLY ALA GLY THR LEU ILE LYS ASP ASN LEU LYS ARG ASP SEQRES 2 D 464 LEU ILE THR SER LEU PRO PHE GLU ILE SER LEU LYS ILE SEQRES 3 D 464 PHE ASN TYR LEU GLN PHE GLU ASP ILE ILE ASN SER LEU SEQRES 4 D 464 GLY VAL SER GLN ASN TRP ASN LYS ILE ILE ARG LYS SER SEQRES 5 D 464 THR SER LEU TRP LYS LYS LEU LEU ILE SER GLU ASN PHE SEQRES 6 D 464 VAL SER PRO LYS GLY PHE ASN SER LEU ASN LEU LYS LEU SEQRES 7 D 464 SER GLN LYS TYR PRO LYS LEU SER GLN GLN ASP ARG LEU SEQRES 8 D 464 ARG LEU SER PHE LEU GLU ASN ILE PHE ILE LEU LYS ASN SEQRES 9 D 464 TRP TYR ASN PRO LYS PHE VAL PRO GLN ARG THR THR LEU SEQRES 10 D 464 ARG GLY HIS MET THR SER VAL ILE THR CYS LEU GLN PHE SEQRES 11 D 464 GLU ASP ASN TYR VAL ILE THR GLY ALA ASP ASP LYS MET SEQRES 12 D 464 ILE ARG VAL TYR ASP SER ILE ASN LYS LYS PHE LEU LEU SEQRES 13 D 464 GLN LEU SER GLY HIS ASP GLY GLY VAL TRP ALA LEU LYS SEQRES 14 D 464 TYR ALA HIS GLY GLY ILE LEU VAL SER GLY SER THR ASP SEQRES 15 D 464 ARG THR VAL ARG VAL TRP ASP ILE LYS LYS GLY CYS CYS SEQRES 16 D 464 THR HIS VAL PHE GLU GLY HIS ASN SER THR VAL ARG CYS SEQRES 17 D 464 LEU ASP ILE VAL GLU TYR LYS ASN ILE LYS TYR ILE VAL SEQRES 18 D 464 THR GLY SER ARG ASP ASN THR LEU HIS VAL TRP LYS LEU SEQRES 19 D 464 PRO LYS GLU SER SER VAL PRO ASP HIS GLY GLU GLU HIS SEQRES 20 D 464 ASP TYR PRO LEU VAL PHE HIS THR PRO GLU GLU ASN PRO SEQRES 21 D 464 TYR PHE VAL GLY VAL LEU ARG GLY HIS MET ALA SER VAL SEQRES 22 D 464 ARG THR VAL SER GLY HIS GLY ASN ILE VAL VAL SER GLY SEQRES 23 D 464 SER TYR ASP ASN THR LEU ILE VAL TRP ASP VAL ALA GLN SEQRES 24 D 464 MET LYS CYS LEU TYR ILE LEU SER GLY HIS THR ASP ARG SEQRES 25 D 464 ILE TYR SER THR ILE TYR ASP HIS GLU ARG LYS ARG CYS SEQRES 26 D 464 ILE SER ALA SER MET ASP THR THR ILE ARG ILE TRP ASP SEQRES 27 D 464 LEU GLU ASN GLY GLU LEU MET TYR THR LEU GLN GLY HIS SEQRES 28 D 464 THR ALA LEU VAL GLY LEU LEU ARG LEU SER ASP LYS PHE SEQRES 29 D 464 LEU VAL SER ALA ALA ALA ASP GLY SER ILE ARG GLY TRP SEQRES 30 D 464 ASP ALA ASN ASP TYR SER ARG LYS PHE SER TYR HIS HIS SEQRES 31 D 464 THR ASN LEU SER ALA ILE THR THR PHE TYR VAL SER ASP SEQRES 32 D 464 ASN ILE LEU VAL SER GLY SER GLU ASN GLN PHE ASN ILE SEQRES 33 D 464 TYR ASN LEU ARG SER GLY LYS LEU VAL HIS ALA ASN ILE SEQRES 34 D 464 LEU LYS ASP ALA ASP GLN ILE TRP SER VAL ASN PHE LYS SEQRES 35 D 464 GLY LYS THR LEU VAL ALA ALA VAL GLU LYS ASP GLY GLN SEQRES 36 D 464 SER PHE LEU GLU ILE LEU ASP PHE SER HET SO4 B 1 5 HET SO4 B 3 5 HET SO4 B 4 5 HET SO4 B 6 5 HET SO4 B 7 5 HET C1C D 1 26 HET SO4 D 2 5 HET SO4 D 5 5 HET SO4 D 8 5 HET SO4 D 9 5 HET SO4 D 10 5 HET SO4 D 11 5 HET GOL D 745 6 HETNAM SO4 SULFATE ION HETNAM C1C 1,1'-BINAPHTHALENE-2,2'-DICARBOXYLIC ACID HETNAM GOL GLYCEROL HETSYN C1C 1-(2-CARBOXYNAPHTH-1YL)-2-NAPHTHOIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 SO4 11(O4 S 2-) FORMUL 10 C1C C22 H14 O4 FORMUL 17 GOL C3 H8 O3 FORMUL 18 HOH *40(H2 O) HELIX 1 1 LYS A 20 GLU A 24 1 5 HELIX 2 2 SER A 26 ASN A 31 1 6 HELIX 3 3 ARG A 83 HIS A 97 1 15 HELIX 4 4 ASP A 117 LEU A 124 1 8 HELIX 5 5 ASP A 127 ASN A 142 1 16 HELIX 6 6 ILE A 143 ARG A 159 1 17 HELIX 7 7 SER A 162 ASN A 171 1 10 HELIX 8 8 THR A 177 ALA A 182 1 6 HELIX 9 9 ASP B 273 LEU B 278 1 6 HELIX 10 10 PRO B 279 ASN B 288 1 10 HELIX 11 11 GLN B 291 GLY B 300 1 10 HELIX 12 12 SER B 302 LYS B 311 1 10 HELIX 13 13 SER B 312 GLU B 323 1 12 HELIX 14 14 GLY B 330 TYR B 342 1 13 HELIX 15 15 SER B 346 ASN B 367 1 22 HELIX 16 16 THR B 515 ASN B 519 5 5 HELIX 17 17 LYS C 20 GLU C 24 1 5 HELIX 18 18 SER C 26 TYR C 32 1 7 HELIX 19 19 ARG C 83 HIS C 97 1 15 HELIX 20 20 TRP C 119 LEU C 124 1 6 HELIX 21 21 ASP C 127 ASN C 142 1 16 HELIX 22 22 ILE C 143 ARG C 159 1 17 HELIX 23 23 SER C 162 ASN C 171 1 10 HELIX 24 24 THR C 177 ARG C 186 1 10 HELIX 25 25 ASP D 273 LEU D 278 1 6 HELIX 26 26 PRO D 279 TYR D 289 1 11 HELIX 27 27 GLN D 291 GLY D 300 1 10 HELIX 28 28 SER D 302 SER D 312 1 11 HELIX 29 29 SER D 312 GLU D 323 1 12 HELIX 30 30 SER D 327 LYS D 329 5 3 HELIX 31 31 GLY D 330 TYR D 342 1 13 HELIX 32 32 SER D 346 ASN D 367 1 22 HELIX 33 33 THR D 515 ASN D 519 5 5 SHEET 1 A 3 ARG A 15 ASP A 19 0 SHEET 2 A 3 ASN A 5 VAL A 9 -1 N VAL A 6 O VAL A 18 SHEET 3 A 3 VAL A 76 PRO A 78 1 O MET A 77 N VAL A 9 SHEET 1 B 4 GLN B 373 ARG B 378 0 SHEET 2 B 4 GLN B 735 ASP B 742 -1 O LEU B 738 N LEU B 377 SHEET 3 B 4 THR B 725 LYS B 732 -1 N LEU B 726 O LEU B 741 SHEET 4 B 4 GLN B 715 LYS B 722 -1 N ASN B 720 O VAL B 727 SHEET 1 C 4 ILE B 385 GLU B 391 0 SHEET 2 C 4 TYR B 394 ALA B 399 -1 O ILE B 396 N GLN B 389 SHEET 3 C 4 ILE B 404 ASP B 408 -1 O TYR B 407 N VAL B 395 SHEET 4 C 4 LYS B 413 LEU B 418 -1 O LYS B 413 N ASP B 408 SHEET 1 D 5 VAL B 425 ALA B 431 0 SHEET 2 D 5 ILE B 435 SER B 440 -1 O ILE B 435 N ALA B 431 SHEET 3 D 5 VAL B 445 ASP B 449 -1 O TRP B 448 N LEU B 436 SHEET 4 D 5 CYS B 454 PHE B 459 -1 O THR B 456 N VAL B 447 SHEET 5 D 5 LEU B 511 PHE B 513 1 O PHE B 513 N VAL B 458 SHEET 1 E 4 VAL B 466 TYR B 474 0 SHEET 2 E 4 ILE B 477 SER B 484 -1 O VAL B 481 N ASP B 470 SHEET 3 E 4 THR B 488 LYS B 493 -1 O TRP B 492 N ILE B 480 SHEET 4 E 4 PHE B 522 ARG B 527 -1 O LEU B 526 N LEU B 489 SHEET 1 F 4 VAL B 533 HIS B 539 0 SHEET 2 F 4 ILE B 542 SER B 547 -1 O GLY B 546 N THR B 535 SHEET 3 F 4 LEU B 552 ASP B 556 -1 O TRP B 555 N VAL B 543 SHEET 4 F 4 LYS B 561 LEU B 566 -1 O LEU B 563 N VAL B 554 SHEET 1 G 4 ILE B 573 ASP B 579 0 SHEET 2 G 4 ARG B 584 SER B 589 -1 O ARG B 584 N ASP B 579 SHEET 3 G 4 ILE B 594 ASP B 598 -1 O TRP B 597 N CYS B 585 SHEET 4 G 4 GLU B 607 LEU B 628 -1 O TYR B 626 N ILE B 596 SHEET 1 H 4 VAL B 635 LEU B 640 0 SHEET 2 H 4 PHE B 644 ALA B 649 -1 O VAL B 646 N ARG B 639 SHEET 3 H 4 SER B 653 ASP B 658 -1 O TRP B 657 N LEU B 645 SHEET 4 H 4 ARG B 664 HIS B 669 -1 O PHE B 666 N GLY B 656 SHEET 1 I 4 ILE B 676 VAL B 681 0 SHEET 2 I 4 ILE B 685 SER B 690 -1 O GLY B 689 N THR B 678 SHEET 3 I 4 GLN B 693 ASN B 698 -1 O TYR B 697 N LEU B 686 SHEET 4 I 4 LYS B 703 HIS B 706 -1 O VAL B 705 N ILE B 696 SHEET 1 J 3 ARG C 15 ASP C 19 0 SHEET 2 J 3 ASN C 5 SER C 10 -1 N LEU C 8 O PHE C 16 SHEET 3 J 3 VAL C 76 VAL C 79 1 O MET C 77 N VAL C 7 SHEET 1 K 4 GLN D 373 ARG D 378 0 SHEET 2 K 4 SER D 736 ASP D 742 -1 O ILE D 740 N THR D 375 SHEET 3 K 4 THR D 725 GLU D 731 -1 N LEU D 726 O LEU D 741 SHEET 4 K 4 GLN D 715 LYS D 722 -1 N ASN D 720 O VAL D 727 SHEET 1 L 4 ILE D 385 GLU D 391 0 SHEET 2 L 4 TYR D 394 ALA D 399 -1 O ILE D 396 N GLN D 389 SHEET 3 L 4 ILE D 404 ASP D 408 -1 O TYR D 407 N VAL D 395 SHEET 4 L 4 LYS D 413 LEU D 418 -1 O LYS D 413 N ASP D 408 SHEET 1 M 5 VAL D 425 ALA D 431 0 SHEET 2 M 5 ILE D 435 SER D 440 -1 O ILE D 435 N ALA D 431 SHEET 3 M 5 VAL D 445 ASP D 449 -1 O TRP D 448 N LEU D 436 SHEET 4 M 5 CYS D 454 PHE D 459 -1 O THR D 456 N VAL D 447 SHEET 5 M 5 LEU D 511 PHE D 513 1 O LEU D 511 N THR D 456 SHEET 1 N 4 VAL D 466 TYR D 474 0 SHEET 2 N 4 ILE D 477 SER D 484 -1 O TYR D 479 N VAL D 472 SHEET 3 N 4 LEU D 489 LYS D 493 -1 O TRP D 492 N ILE D 480 SHEET 4 N 4 PHE D 522 LEU D 526 -1 O LEU D 526 N LEU D 489 SHEET 1 O 4 VAL D 533 HIS D 539 0 SHEET 2 O 4 ILE D 542 SER D 547 -1 O VAL D 544 N SER D 537 SHEET 3 O 4 LEU D 552 ASP D 556 -1 O TRP D 555 N VAL D 543 SHEET 4 O 4 LYS D 561 LEU D 566 -1 O LEU D 563 N VAL D 554 SHEET 1 P 4 ILE D 573 ASP D 579 0 SHEET 2 P 4 ARG D 584 SER D 589 -1 O ARG D 584 N ASP D 579 SHEET 3 P 4 ILE D 594 ASP D 598 -1 O ARG D 595 N SER D 587 SHEET 4 P 4 GLU D 607 LEU D 628 -1 O LEU D 628 N ILE D 594 SHEET 1 Q 4 LEU D 634 LEU D 640 0 SHEET 2 Q 4 PHE D 644 ALA D 649 -1 O VAL D 646 N ARG D 639 SHEET 3 Q 4 SER D 653 ASP D 658 -1 O TRP D 657 N LEU D 645 SHEET 4 Q 4 ARG D 664 HIS D 669 -1 O LYS D 665 N GLY D 656 SHEET 1 R 4 ILE D 676 VAL D 681 0 SHEET 2 R 4 ILE D 685 SER D 690 -1 O GLY D 689 N THR D 678 SHEET 3 R 4 GLN D 693 ASN D 698 -1 O ASN D 695 N SER D 688 SHEET 4 R 4 LYS D 703 HIS D 706 -1 O VAL D 705 N ILE D 696 CISPEP 1 TYR C 32 LEU C 33 0 -11.68 CISPEP 2 LEU C 33 ASN C 34 0 9.03 CISPEP 3 GLN D 629 GLY D 630 0 26.90 SITE 1 AC1 4 PHE B 280 LYS B 311 SER B 312 SER B 314 SITE 1 AC2 1 PHE B 280 SITE 1 AC3 4 HOH B 29 GLN B 389 ARG B 639 ASN B 720 SITE 1 AC4 4 HIS B 706 ALA B 707 ASN B 708 ILE B 709 SITE 1 AC5 5 TRP B 365 SER B 682 ILE B 685 PHE B 721 SITE 2 AC5 5 GLY B 723 SITE 1 AC6 9 GLN D 629 GLY D 630 THR D 632 ARG D 655 SITE 2 AC6 9 GLY D 656 TRP D 657 ARG D 664 PHE D 666 SITE 3 AC6 9 SER D 667 SITE 1 AC7 4 LYS D 665 LEU D 699 ARG D 700 GLY D 702 SITE 1 AC8 5 ILE D 471 VAL D 472 GLU D 473 HIS D 539 SITE 2 AC8 5 GLY D 540 SITE 1 AC9 3 ARG D 467 ARG D 485 TYR D 548 SITE 1 BC1 2 GLN D 340 HIS D 432 SITE 1 BC2 2 PRO D 279 PHE D 280 SITE 1 BC3 5 LEU D 284 LYS D 311 SER D 312 THR D 313 SITE 2 BC3 5 SER D 314 SITE 1 BC4 5 HOH D 38 GLN D 389 ARG D 639 TYR D 680 SITE 2 BC4 5 ASN D 720 CRYST1 108.281 108.281 165.594 90.00 90.00 120.00 P 32 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009235 0.005332 0.000000 0.00000 SCALE2 0.000000 0.010664 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006039 0.00000