data_3MKZ # _entry.id 3MKZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3MKZ pdb_00003mkz 10.2210/pdb3mkz/pdb NDB NA0509 ? ? RCSB RCSB058675 ? ? WWPDB D_1000058675 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3MKW 'SopB(155-272)-18mer,I23 crystal form' unspecified PDB 3MKY 'SopB(155-323)-18mer, I23 crystal form' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3MKZ _pdbx_database_status.recvd_initial_deposition_date 2010-04-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Schumacher, M.A.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Insight into F plasmid DNA segregation revealed by structures of SopB and SopB-DNA complexes.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 38 _citation.page_first 4514 _citation.page_last 4526 _citation.year 2010 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20236989 _citation.pdbx_database_id_DOI 10.1093/nar/gkq161 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Schumacher, M.A.' 1 ? primary 'Piro, K.M.' 2 ? primary 'Xu, W.' 3 ? # _cell.entry_id 3MKZ _cell.length_a 111.380 _cell.length_b 47.120 _cell.length_c 118.230 _cell.angle_alpha 90.00 _cell.angle_beta 115.97 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3MKZ _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein sopB' 13267.931 4 ? ? 'UNP residues 155 to 272' ? 2 polymer syn ;DNA (5'-D(*CP*TP*GP*GP*GP*AP*CP*CP*AP*TP*GP*GP*TP*CP*CP*CP*AP*G)-3') ; 5517.566 4 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 4 ? ? ? ? 4 water nat water 18.015 12 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Plasmid partition protein B' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSHYRPTSAYERGQRYASRLQNEFAGNISALADAENISRKIITRCINTAKLPKSVVALFSHPGELSARSGDALQKAFTDK EELLKQQASNLHEQKKAGVIFEADEVITLLTSVLKTSSASR ; ;GSHYRPTSAYERGQRYASRLQNEFAGNISALADAENISRKIITRCINTAKLPKSVVALFSHPGELSARSGDALQKAFTDK EELLKQQASNLHEQKKAGVIFEADEVITLLTSVLKTSSASR ; A,B,U,N ? 2 polydeoxyribonucleotide no no '(DC)(DT)(DG)(DG)(DG)(DA)(DC)(DC)(DA)(DT)(DG)(DG)(DT)(DC)(DC)(DC)(DA)(DG)' CTGGGACCATGGTCCCAG C,D,Y,Z ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 TYR n 1 5 ARG n 1 6 PRO n 1 7 THR n 1 8 SER n 1 9 ALA n 1 10 TYR n 1 11 GLU n 1 12 ARG n 1 13 GLY n 1 14 GLN n 1 15 ARG n 1 16 TYR n 1 17 ALA n 1 18 SER n 1 19 ARG n 1 20 LEU n 1 21 GLN n 1 22 ASN n 1 23 GLU n 1 24 PHE n 1 25 ALA n 1 26 GLY n 1 27 ASN n 1 28 ILE n 1 29 SER n 1 30 ALA n 1 31 LEU n 1 32 ALA n 1 33 ASP n 1 34 ALA n 1 35 GLU n 1 36 ASN n 1 37 ILE n 1 38 SER n 1 39 ARG n 1 40 LYS n 1 41 ILE n 1 42 ILE n 1 43 THR n 1 44 ARG n 1 45 CYS n 1 46 ILE n 1 47 ASN n 1 48 THR n 1 49 ALA n 1 50 LYS n 1 51 LEU n 1 52 PRO n 1 53 LYS n 1 54 SER n 1 55 VAL n 1 56 VAL n 1 57 ALA n 1 58 LEU n 1 59 PHE n 1 60 SER n 1 61 HIS n 1 62 PRO n 1 63 GLY n 1 64 GLU n 1 65 LEU n 1 66 SER n 1 67 ALA n 1 68 ARG n 1 69 SER n 1 70 GLY n 1 71 ASP n 1 72 ALA n 1 73 LEU n 1 74 GLN n 1 75 LYS n 1 76 ALA n 1 77 PHE n 1 78 THR n 1 79 ASP n 1 80 LYS n 1 81 GLU n 1 82 GLU n 1 83 LEU n 1 84 LEU n 1 85 LYS n 1 86 GLN n 1 87 GLN n 1 88 ALA n 1 89 SER n 1 90 ASN n 1 91 LEU n 1 92 HIS n 1 93 GLU n 1 94 GLN n 1 95 LYS n 1 96 LYS n 1 97 ALA n 1 98 GLY n 1 99 VAL n 1 100 ILE n 1 101 PHE n 1 102 GLU n 1 103 ALA n 1 104 ASP n 1 105 GLU n 1 106 VAL n 1 107 ILE n 1 108 THR n 1 109 LEU n 1 110 LEU n 1 111 THR n 1 112 SER n 1 113 VAL n 1 114 LEU n 1 115 LYS n 1 116 THR n 1 117 SER n 1 118 SER n 1 119 ALA n 1 120 SER n 1 121 ARG n 2 1 DC n 2 2 DT n 2 3 DG n 2 4 DG n 2 5 DG n 2 6 DA n 2 7 DC n 2 8 DC n 2 9 DA n 2 10 DT n 2 11 DG n 2 12 DG n 2 13 DT n 2 14 DC n 2 15 DC n 2 16 DC n 2 17 DA n 2 18 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'B, ECOK12F047, F plasmid, sopB' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K-12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details 'artificial gene of sopB' _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'The DNA was chemically synthesized.' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP SOPB_ECOLI P62558 1 ;YRPTSAYERGQRYASRLQNEFAGNISALADAENISRKIITRCINTAKLPKSVVALFSHPGELSARSGDALQKAFTDKEEL LKQQASNLHEQKKAGVIFEAEEVITLLTSVLKTSSASR ; 155 ? 2 PDB 3MKZ 3MKZ 2 CTGGGACCATGGTCCCAG 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3MKZ A 4 ? 121 ? P62558 155 ? 272 ? 155 272 2 1 3MKZ B 4 ? 121 ? P62558 155 ? 272 ? 155 272 3 1 3MKZ U 4 ? 121 ? P62558 155 ? 272 ? 155 272 4 1 3MKZ N 4 ? 121 ? P62558 155 ? 272 ? 155 272 5 2 3MKZ C 1 ? 18 ? 3MKZ 1 ? 18 ? 1 18 6 2 3MKZ D 1 ? 18 ? 3MKZ 1 ? 18 ? 1 18 7 2 3MKZ Y 1 ? 18 ? 3MKZ 1 ? 18 ? 1 18 8 2 3MKZ Z 1 ? 18 ? 3MKZ 1 ? 18 ? 1 18 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3MKZ GLY A 1 ? UNP P62558 ? ? 'expression tag' 152 1 1 3MKZ SER A 2 ? UNP P62558 ? ? 'expression tag' 153 2 1 3MKZ HIS A 3 ? UNP P62558 ? ? 'expression tag' 154 3 1 3MKZ ASP A 104 ? UNP P62558 GLU 255 conflict 255 4 2 3MKZ GLY B 1 ? UNP P62558 ? ? 'expression tag' 152 5 2 3MKZ SER B 2 ? UNP P62558 ? ? 'expression tag' 153 6 2 3MKZ HIS B 3 ? UNP P62558 ? ? 'expression tag' 154 7 2 3MKZ ASP B 104 ? UNP P62558 GLU 255 conflict 255 8 3 3MKZ GLY U 1 ? UNP P62558 ? ? 'expression tag' 152 9 3 3MKZ SER U 2 ? UNP P62558 ? ? 'expression tag' 153 10 3 3MKZ HIS U 3 ? UNP P62558 ? ? 'expression tag' 154 11 3 3MKZ ASP U 104 ? UNP P62558 GLU 255 conflict 255 12 4 3MKZ GLY N 1 ? UNP P62558 ? ? 'expression tag' 152 13 4 3MKZ SER N 2 ? UNP P62558 ? ? 'expression tag' 153 14 4 3MKZ HIS N 3 ? UNP P62558 ? ? 'expression tag' 154 15 4 3MKZ ASP N 104 ? UNP P62558 GLU 255 conflict 255 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3MKZ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.71 _exptl_crystal.density_percent_sol 66.86 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'PEG 400, Calcium chloride 200 mM, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2009-10-12 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator graphite _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.3.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 3MKZ _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 99 _reflns.d_resolution_high 2.98 _reflns.number_obs 22277 _reflns.number_all 22300 _reflns.percent_possible_obs 99 _reflns.pdbx_Rmerge_I_obs 0.067 _reflns.pdbx_Rsym_value 0.067 _reflns.pdbx_netI_over_sigmaI 7.3 _reflns.B_iso_Wilson_estimate 250.0 _reflns.pdbx_redundancy 2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 3MKZ _refine.ls_number_reflns_obs 22266 _refine.ls_number_reflns_all 22280 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 706163.06 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.07 _refine.ls_d_res_high 2.98 _refine.ls_percent_reflns_obs 96.2 _refine.ls_R_factor_obs 0.213 _refine.ls_R_factor_all 0.213 _refine.ls_R_factor_R_work 0.213 _refine.ls_R_factor_R_free 0.264 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.9 _refine.ls_number_reflns_R_free 2202 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 79.4 _refine.aniso_B[1][1] -24.71 _refine.aniso_B[2][2] 0.24 _refine.aniso_B[3][3] 24.47 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -3.21 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.35 _refine.solvent_model_param_bsol 49.4301 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model 'PDB entry 3MKW' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3MKZ _refine_analyze.Luzzati_coordinate_error_obs 0.37 _refine_analyze.Luzzati_sigma_a_obs 0.56 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.45 _refine_analyze.Luzzati_sigma_a_free 0.59 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3419 _refine_hist.pdbx_number_atoms_nucleic_acid 1464 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 12 _refine_hist.number_atoms_total 4899 _refine_hist.d_res_high 2.98 _refine_hist.d_res_low 50.07 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.011 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 19.8 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.28 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.98 _refine_ls_shell.d_res_low 3.17 _refine_ls_shell.number_reflns_R_work 3136 _refine_ls_shell.R_factor_R_work 0.337 _refine_ls_shell.percent_reflns_obs 90.1 _refine_ls_shell.R_factor_R_free 0.398 _refine_ls_shell.R_factor_R_free_error 0.023 _refine_ls_shell.percent_reflns_R_free 8.9 _refine_ls_shell.number_reflns_R_free 307 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param water.top 'X-RAY DIFFRACTION' 3 ion.param ion.top 'X-RAY DIFFRACTION' 4 dna-rna_rep.param dna-rna.top 'X-RAY DIFFRACTION' # _struct_ncs_dom.id 1 _struct_ncs_dom.details ? _struct_ncs_dom.pdbx_ens_id 1 # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 3MKZ _struct.title 'Structure of SopB(155-272)-18mer complex, P21 form' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3MKZ _struct_keywords.pdbx_keywords 'DNA-BINDING PROTEIN/DNA' _struct_keywords.text 'partition, SopB, F plasmid, centromere, DNA-BINDING PROTEIN-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 1 ? F N N 2 ? G N N 2 ? H N N 1 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 4 ? N N N 4 ? O N N 4 ? P N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 8 ? PHE A 24 ? SER A 159 PHE A 175 1 ? 17 HELX_P HELX_P2 2 ASN A 27 ? ALA A 34 ? ASN A 178 ALA A 185 1 ? 8 HELX_P HELX_P3 3 SER A 38 ? LYS A 50 ? SER A 189 LYS A 201 1 ? 13 HELX_P HELX_P4 4 PRO A 52 ? LEU A 58 ? PRO A 203 LEU A 209 1 ? 7 HELX_P HELX_P5 5 HIS A 61 ? LEU A 65 ? HIS A 212 LEU A 216 5 ? 5 HELX_P HELX_P6 6 SER A 66 ? PHE A 77 ? SER A 217 PHE A 228 1 ? 12 HELX_P HELX_P7 7 LYS A 80 ? ALA A 97 ? LYS A 231 ALA A 248 1 ? 18 HELX_P HELX_P8 8 GLU A 102 ? SER A 112 ? GLU A 253 SER A 263 1 ? 11 HELX_P HELX_P9 9 VAL A 113 ? LYS A 115 ? VAL A 264 LYS A 266 5 ? 3 HELX_P HELX_P10 10 SER B 8 ? PHE B 24 ? SER B 159 PHE B 175 1 ? 17 HELX_P HELX_P11 11 ASN B 27 ? GLU B 35 ? ASN B 178 GLU B 186 1 ? 9 HELX_P HELX_P12 12 SER B 38 ? LEU B 51 ? SER B 189 LEU B 202 1 ? 14 HELX_P HELX_P13 13 PRO B 52 ? LEU B 58 ? PRO B 203 LEU B 209 1 ? 7 HELX_P HELX_P14 14 HIS B 61 ? LEU B 65 ? HIS B 212 LEU B 216 5 ? 5 HELX_P HELX_P15 15 SER B 66 ? PHE B 77 ? SER B 217 PHE B 228 1 ? 12 HELX_P HELX_P16 16 LYS B 80 ? ALA B 97 ? LYS B 231 ALA B 248 1 ? 18 HELX_P HELX_P17 17 GLU B 102 ? SER B 112 ? GLU B 253 SER B 263 1 ? 11 HELX_P HELX_P18 18 VAL B 113 ? LYS B 115 ? VAL B 264 LYS B 266 5 ? 3 HELX_P HELX_P19 19 SER E 8 ? ALA E 25 ? SER U 159 ALA U 176 1 ? 18 HELX_P HELX_P20 20 ASN E 27 ? ALA E 34 ? ASN U 178 ALA U 185 1 ? 8 HELX_P HELX_P21 21 SER E 38 ? LYS E 50 ? SER U 189 LYS U 201 1 ? 13 HELX_P HELX_P22 22 PRO E 52 ? ALA E 57 ? PRO U 203 ALA U 208 1 ? 6 HELX_P HELX_P23 23 SER E 66 ? LYS E 75 ? SER U 217 LYS U 226 1 ? 10 HELX_P HELX_P24 24 LYS E 80 ? GLU E 93 ? LYS U 231 GLU U 244 1 ? 14 HELX_P HELX_P25 25 GLU E 93 ? GLY E 98 ? GLU U 244 GLY U 249 1 ? 6 HELX_P HELX_P26 26 GLU E 102 ? THR E 111 ? GLU U 253 THR U 262 1 ? 10 HELX_P HELX_P27 27 SER H 8 ? ALA H 25 ? SER N 159 ALA N 176 1 ? 18 HELX_P HELX_P28 28 ASN H 27 ? GLU H 35 ? ASN N 178 GLU N 186 1 ? 9 HELX_P HELX_P29 29 SER H 38 ? LYS H 50 ? SER N 189 LYS N 201 1 ? 13 HELX_P HELX_P30 30 PRO H 52 ? ALA H 57 ? PRO N 203 ALA N 208 1 ? 6 HELX_P HELX_P31 31 HIS H 61 ? LEU H 65 ? HIS N 212 LEU N 216 5 ? 5 HELX_P HELX_P32 32 SER H 66 ? ALA H 76 ? SER N 217 ALA N 227 1 ? 11 HELX_P HELX_P33 33 LYS H 80 ? ALA H 97 ? LYS N 231 ALA N 248 1 ? 18 HELX_P HELX_P34 34 GLU H 102 ? VAL H 113 ? GLU N 253 VAL N 264 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C DC 1 N3 ? ? ? 1_555 D DG 18 N1 ? ? C DC 1 D DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DC 1 N4 ? ? ? 1_555 D DG 18 O6 ? ? C DC 1 D DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DC 1 O2 ? ? ? 1_555 D DG 18 N2 ? ? C DC 1 D DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DT 2 N3 ? ? ? 1_555 D DA 17 N1 ? ? C DT 2 D DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DT 2 O4 ? ? ? 1_555 D DA 17 N6 ? ? C DT 2 D DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DG 3 N1 ? ? ? 1_555 D DC 16 N3 ? ? C DG 3 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DG 3 N2 ? ? ? 1_555 D DC 16 O2 ? ? C DG 3 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DG 3 O6 ? ? ? 1_555 D DC 16 N4 ? ? C DG 3 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DG 4 N1 ? ? ? 1_555 D DC 15 N3 ? ? C DG 4 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DG 4 N2 ? ? ? 1_555 D DC 15 O2 ? ? C DG 4 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DG 4 O6 ? ? ? 1_555 D DC 15 N4 ? ? C DG 4 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DG 5 N1 ? ? ? 1_555 D DC 14 N3 ? ? C DG 5 D DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DG 5 N2 ? ? ? 1_555 D DC 14 O2 ? ? C DG 5 D DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DG 5 O6 ? ? ? 1_555 D DC 14 N4 ? ? C DG 5 D DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DA 6 N1 ? ? ? 1_555 D DT 13 N3 ? ? C DA 6 D DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DA 6 N6 ? ? ? 1_555 D DT 13 O4 ? ? C DA 6 D DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DC 7 N3 ? ? ? 1_555 D DG 12 N1 ? ? C DC 7 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DC 7 N4 ? ? ? 1_555 D DG 12 O6 ? ? C DC 7 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DC 7 O2 ? ? ? 1_555 D DG 12 N2 ? ? C DC 7 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 11 N1 ? ? C DC 8 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 11 O6 ? ? C DC 8 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 11 N2 ? ? C DC 8 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DA 9 N1 ? ? ? 1_555 D DT 10 N3 ? ? C DA 9 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DA 9 N6 ? ? ? 1_555 D DT 10 O4 ? ? C DA 9 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DT 10 N3 ? ? ? 1_555 D DA 9 N1 ? ? C DT 10 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DT 10 O4 ? ? ? 1_555 D DA 9 N6 ? ? C DT 10 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DG 11 N1 ? ? ? 1_555 D DC 8 N3 ? ? C DG 11 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DG 11 N2 ? ? ? 1_555 D DC 8 O2 ? ? C DG 11 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DG 11 O6 ? ? ? 1_555 D DC 8 N4 ? ? C DG 11 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DG 12 N1 ? ? ? 1_555 D DC 7 N3 ? ? C DG 12 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DG 12 N2 ? ? ? 1_555 D DC 7 O2 ? ? C DG 12 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DG 12 O6 ? ? ? 1_555 D DC 7 N4 ? ? C DG 12 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DT 13 N3 ? ? ? 1_555 D DA 6 N1 ? ? C DT 13 D DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DT 13 O4 ? ? ? 1_555 D DA 6 N6 ? ? C DT 13 D DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DC 14 N3 ? ? ? 1_555 D DG 5 N1 ? ? C DC 14 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DC 14 N4 ? ? ? 1_555 D DG 5 O6 ? ? C DC 14 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DC 14 O2 ? ? ? 1_555 D DG 5 N2 ? ? C DC 14 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DC 15 N3 ? ? ? 1_555 D DG 4 N1 ? ? C DC 15 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DC 15 N4 ? ? ? 1_555 D DG 4 O6 ? ? C DC 15 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DC 15 O2 ? ? ? 1_555 D DG 4 N2 ? ? C DC 15 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DC 16 N3 ? ? ? 1_555 D DG 3 N1 ? ? C DC 16 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DC 16 N4 ? ? ? 1_555 D DG 3 O6 ? ? C DC 16 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DC 16 O2 ? ? ? 1_555 D DG 3 N2 ? ? C DC 16 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C DA 17 N1 ? ? ? 1_555 D DT 2 N3 ? ? C DA 17 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C DA 17 N6 ? ? ? 1_555 D DT 2 O4 ? ? C DA 17 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C DG 18 N1 ? ? ? 1_555 D DC 1 N3 ? ? C DG 18 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C DG 18 N2 ? ? ? 1_555 D DC 1 O2 ? ? C DG 18 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C DG 18 O6 ? ? ? 1_555 D DC 1 N4 ? ? C DG 18 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? F DC 1 N3 ? ? ? 1_555 G DG 18 N1 ? ? Y DC 1 Z DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? F DC 1 N4 ? ? ? 1_555 G DG 18 O6 ? ? Y DC 1 Z DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? F DC 1 O2 ? ? ? 1_555 G DG 18 N2 ? ? Y DC 1 Z DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? F DT 2 N3 ? ? ? 1_555 G DA 17 N1 ? ? Y DT 2 Z DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? F DT 2 O4 ? ? ? 1_555 G DA 17 N6 ? ? Y DT 2 Z DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? F DG 3 N1 ? ? ? 1_555 G DC 16 N3 ? ? Y DG 3 Z DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? F DG 3 N2 ? ? ? 1_555 G DC 16 O2 ? ? Y DG 3 Z DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? F DG 3 O6 ? ? ? 1_555 G DC 16 N4 ? ? Y DG 3 Z DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? F DG 4 N1 ? ? ? 1_555 G DC 15 N3 ? ? Y DG 4 Z DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? F DG 4 N2 ? ? ? 1_555 G DC 15 O2 ? ? Y DG 4 Z DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? F DG 4 O6 ? ? ? 1_555 G DC 15 N4 ? ? Y DG 4 Z DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? F DG 5 N1 ? ? ? 1_555 G DC 14 N3 ? ? Y DG 5 Z DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? F DG 5 N2 ? ? ? 1_555 G DC 14 O2 ? ? Y DG 5 Z DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? F DG 5 O6 ? ? ? 1_555 G DC 14 N4 ? ? Y DG 5 Z DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? F DA 6 N1 ? ? ? 1_555 G DT 13 N3 ? ? Y DA 6 Z DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? F DA 6 N6 ? ? ? 1_555 G DT 13 O4 ? ? Y DA 6 Z DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? F DC 7 N3 ? ? ? 1_555 G DG 12 N1 ? ? Y DC 7 Z DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? F DC 7 N4 ? ? ? 1_555 G DG 12 O6 ? ? Y DC 7 Z DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? F DC 7 O2 ? ? ? 1_555 G DG 12 N2 ? ? Y DC 7 Z DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? F DC 8 N3 ? ? ? 1_555 G DG 11 N1 ? ? Y DC 8 Z DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? F DC 8 N4 ? ? ? 1_555 G DG 11 O6 ? ? Y DC 8 Z DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? F DC 8 O2 ? ? ? 1_555 G DG 11 N2 ? ? Y DC 8 Z DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? F DA 9 N1 ? ? ? 1_555 G DT 10 N3 ? ? Y DA 9 Z DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? F DA 9 N6 ? ? ? 1_555 G DT 10 O4 ? ? Y DA 9 Z DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? F DT 10 N3 ? ? ? 1_555 G DA 9 N1 ? ? Y DT 10 Z DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? F DT 10 O4 ? ? ? 1_555 G DA 9 N6 ? ? Y DT 10 Z DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? F DG 11 N1 ? ? ? 1_555 G DC 8 N3 ? ? Y DG 11 Z DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? F DG 11 N2 ? ? ? 1_555 G DC 8 O2 ? ? Y DG 11 Z DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? F DG 11 O6 ? ? ? 1_555 G DC 8 N4 ? ? Y DG 11 Z DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? F DG 12 N1 ? ? ? 1_555 G DC 7 N3 ? ? Y DG 12 Z DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? F DG 12 N2 ? ? ? 1_555 G DC 7 O2 ? ? Y DG 12 Z DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? F DG 12 O6 ? ? ? 1_555 G DC 7 N4 ? ? Y DG 12 Z DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? F DT 13 N3 ? ? ? 1_555 G DA 6 N1 ? ? Y DT 13 Z DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? F DT 13 O4 ? ? ? 1_555 G DA 6 N6 ? ? Y DT 13 Z DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? F DC 14 N3 ? ? ? 1_555 G DG 5 N1 ? ? Y DC 14 Z DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? F DC 14 N4 ? ? ? 1_555 G DG 5 O6 ? ? Y DC 14 Z DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? F DC 14 O2 ? ? ? 1_555 G DG 5 N2 ? ? Y DC 14 Z DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? F DC 15 N3 ? ? ? 1_555 G DG 4 N1 ? ? Y DC 15 Z DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? F DC 15 N4 ? ? ? 1_555 G DG 4 O6 ? ? Y DC 15 Z DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? F DC 15 O2 ? ? ? 1_555 G DG 4 N2 ? ? Y DC 15 Z DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? F DC 16 N3 ? ? ? 1_555 G DG 3 N1 ? ? Y DC 16 Z DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? F DC 16 N4 ? ? ? 1_555 G DG 3 O6 ? ? Y DC 16 Z DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? F DC 16 O2 ? ? ? 1_555 G DG 3 N2 ? ? Y DC 16 Z DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? F DA 17 N1 ? ? ? 1_555 G DT 2 N3 ? ? Y DA 17 Z DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? F DA 17 N6 ? ? ? 1_555 G DT 2 O4 ? ? Y DA 17 Z DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? F DG 18 N1 ? ? ? 1_555 G DC 1 N3 ? ? Y DG 18 Z DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? F DG 18 N2 ? ? ? 1_555 G DC 1 O2 ? ? Y DG 18 Z DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? F DG 18 O6 ? ? ? 1_555 G DC 1 N4 ? ? Y DG 18 Z DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CA 1 ? 2 'BINDING SITE FOR RESIDUE CA A 1' AC2 Software Z CA 19 ? 1 'BINDING SITE FOR RESIDUE CA Z 19' AC3 Software Z CA 20 ? 1 'BINDING SITE FOR RESIDUE CA Z 20' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 ASP A 33 ? ASP A 184 . ? 1_555 ? 2 AC1 2 ASN A 36 ? ASN A 187 . ? 1_555 ? 3 AC2 1 DG G 3 ? DG Z 3 . ? 1_555 ? 4 AC3 1 DT G 13 ? DT Z 13 . ? 1_555 ? # _database_PDB_matrix.entry_id 3MKZ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3MKZ _atom_sites.fract_transf_matrix[1][1] 0.008978 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004373 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021222 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009408 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 152 ? ? ? A . n A 1 2 SER 2 153 ? ? ? A . n A 1 3 HIS 3 154 ? ? ? A . n A 1 4 TYR 4 155 ? ? ? A . n A 1 5 ARG 5 156 ? ? ? A . n A 1 6 PRO 6 157 157 PRO PRO A . n A 1 7 THR 7 158 158 THR THR A . n A 1 8 SER 8 159 159 SER SER A . n A 1 9 ALA 9 160 160 ALA ALA A . n A 1 10 TYR 10 161 161 TYR TYR A . n A 1 11 GLU 11 162 162 GLU GLU A . n A 1 12 ARG 12 163 163 ARG ARG A . n A 1 13 GLY 13 164 164 GLY GLY A . n A 1 14 GLN 14 165 165 GLN GLN A . n A 1 15 ARG 15 166 166 ARG ARG A . n A 1 16 TYR 16 167 167 TYR TYR A . n A 1 17 ALA 17 168 168 ALA ALA A . n A 1 18 SER 18 169 169 SER SER A . n A 1 19 ARG 19 170 170 ARG ARG A . n A 1 20 LEU 20 171 171 LEU LEU A . n A 1 21 GLN 21 172 172 GLN GLN A . n A 1 22 ASN 22 173 173 ASN ASN A . n A 1 23 GLU 23 174 174 GLU GLU A . n A 1 24 PHE 24 175 175 PHE PHE A . n A 1 25 ALA 25 176 176 ALA ALA A . n A 1 26 GLY 26 177 177 GLY GLY A . n A 1 27 ASN 27 178 178 ASN ASN A . n A 1 28 ILE 28 179 179 ILE ILE A . n A 1 29 SER 29 180 180 SER SER A . n A 1 30 ALA 30 181 181 ALA ALA A . n A 1 31 LEU 31 182 182 LEU LEU A . n A 1 32 ALA 32 183 183 ALA ALA A . n A 1 33 ASP 33 184 184 ASP ASP A . n A 1 34 ALA 34 185 185 ALA ALA A . n A 1 35 GLU 35 186 186 GLU GLU A . n A 1 36 ASN 36 187 187 ASN ASN A . n A 1 37 ILE 37 188 188 ILE ILE A . n A 1 38 SER 38 189 189 SER SER A . n A 1 39 ARG 39 190 190 ARG ARG A . n A 1 40 LYS 40 191 191 LYS LYS A . n A 1 41 ILE 41 192 192 ILE ILE A . n A 1 42 ILE 42 193 193 ILE ILE A . n A 1 43 THR 43 194 194 THR THR A . n A 1 44 ARG 44 195 195 ARG ARG A . n A 1 45 CYS 45 196 196 CYS CYS A . n A 1 46 ILE 46 197 197 ILE ILE A . n A 1 47 ASN 47 198 198 ASN ASN A . n A 1 48 THR 48 199 199 THR THR A . n A 1 49 ALA 49 200 200 ALA ALA A . n A 1 50 LYS 50 201 201 LYS LYS A . n A 1 51 LEU 51 202 202 LEU LEU A . n A 1 52 PRO 52 203 203 PRO PRO A . n A 1 53 LYS 53 204 204 LYS LYS A . n A 1 54 SER 54 205 205 SER SER A . n A 1 55 VAL 55 206 206 VAL VAL A . n A 1 56 VAL 56 207 207 VAL VAL A . n A 1 57 ALA 57 208 208 ALA ALA A . n A 1 58 LEU 58 209 209 LEU LEU A . n A 1 59 PHE 59 210 210 PHE PHE A . n A 1 60 SER 60 211 211 SER SER A . n A 1 61 HIS 61 212 212 HIS HIS A . n A 1 62 PRO 62 213 213 PRO PRO A . n A 1 63 GLY 63 214 214 GLY GLY A . n A 1 64 GLU 64 215 215 GLU GLU A . n A 1 65 LEU 65 216 216 LEU LEU A . n A 1 66 SER 66 217 217 SER SER A . n A 1 67 ALA 67 218 218 ALA ALA A . n A 1 68 ARG 68 219 219 ARG ARG A . n A 1 69 SER 69 220 220 SER SER A . n A 1 70 GLY 70 221 221 GLY GLY A . n A 1 71 ASP 71 222 222 ASP ASP A . n A 1 72 ALA 72 223 223 ALA ALA A . n A 1 73 LEU 73 224 224 LEU LEU A . n A 1 74 GLN 74 225 225 GLN GLN A . n A 1 75 LYS 75 226 226 LYS LYS A . n A 1 76 ALA 76 227 227 ALA ALA A . n A 1 77 PHE 77 228 228 PHE PHE A . n A 1 78 THR 78 229 229 THR THR A . n A 1 79 ASP 79 230 230 ASP ASP A . n A 1 80 LYS 80 231 231 LYS LYS A . n A 1 81 GLU 81 232 232 GLU GLU A . n A 1 82 GLU 82 233 233 GLU GLU A . n A 1 83 LEU 83 234 234 LEU LEU A . n A 1 84 LEU 84 235 235 LEU LEU A . n A 1 85 LYS 85 236 236 LYS LYS A . n A 1 86 GLN 86 237 237 GLN GLN A . n A 1 87 GLN 87 238 238 GLN GLN A . n A 1 88 ALA 88 239 239 ALA ALA A . n A 1 89 SER 89 240 240 SER SER A . n A 1 90 ASN 90 241 241 ASN ASN A . n A 1 91 LEU 91 242 242 LEU LEU A . n A 1 92 HIS 92 243 243 HIS HIS A . n A 1 93 GLU 93 244 244 GLU GLU A . n A 1 94 GLN 94 245 245 GLN GLN A . n A 1 95 LYS 95 246 246 LYS LYS A . n A 1 96 LYS 96 247 247 LYS LYS A . n A 1 97 ALA 97 248 248 ALA ALA A . n A 1 98 GLY 98 249 249 GLY GLY A . n A 1 99 VAL 99 250 250 VAL VAL A . n A 1 100 ILE 100 251 251 ILE ILE A . n A 1 101 PHE 101 252 252 PHE PHE A . n A 1 102 GLU 102 253 253 GLU GLU A . n A 1 103 ALA 103 254 254 ALA ALA A . n A 1 104 ASP 104 255 255 ASP ASP A . n A 1 105 GLU 105 256 256 GLU GLU A . n A 1 106 VAL 106 257 257 VAL VAL A . n A 1 107 ILE 107 258 258 ILE ILE A . n A 1 108 THR 108 259 259 THR THR A . n A 1 109 LEU 109 260 260 LEU LEU A . n A 1 110 LEU 110 261 261 LEU LEU A . n A 1 111 THR 111 262 262 THR THR A . n A 1 112 SER 112 263 263 SER SER A . n A 1 113 VAL 113 264 264 VAL VAL A . n A 1 114 LEU 114 265 265 LEU LEU A . n A 1 115 LYS 115 266 266 LYS LYS A . n A 1 116 THR 116 267 267 THR THR A . n A 1 117 SER 117 268 268 SER SER A . n A 1 118 SER 118 269 ? ? ? A . n A 1 119 ALA 119 270 ? ? ? A . n A 1 120 SER 120 271 ? ? ? A . n A 1 121 ARG 121 272 ? ? ? A . n B 1 1 GLY 1 152 ? ? ? B . n B 1 2 SER 2 153 ? ? ? B . n B 1 3 HIS 3 154 ? ? ? B . n B 1 4 TYR 4 155 ? ? ? B . n B 1 5 ARG 5 156 ? ? ? B . n B 1 6 PRO 6 157 157 PRO PRO B . n B 1 7 THR 7 158 158 THR THR B . n B 1 8 SER 8 159 159 SER SER B . n B 1 9 ALA 9 160 160 ALA ALA B . n B 1 10 TYR 10 161 161 TYR TYR B . n B 1 11 GLU 11 162 162 GLU GLU B . n B 1 12 ARG 12 163 163 ARG ARG B . n B 1 13 GLY 13 164 164 GLY GLY B . n B 1 14 GLN 14 165 165 GLN GLN B . n B 1 15 ARG 15 166 166 ARG ARG B . n B 1 16 TYR 16 167 167 TYR TYR B . n B 1 17 ALA 17 168 168 ALA ALA B . n B 1 18 SER 18 169 169 SER SER B . n B 1 19 ARG 19 170 170 ARG ARG B . n B 1 20 LEU 20 171 171 LEU LEU B . n B 1 21 GLN 21 172 172 GLN GLN B . n B 1 22 ASN 22 173 173 ASN ASN B . n B 1 23 GLU 23 174 174 GLU GLU B . n B 1 24 PHE 24 175 175 PHE PHE B . n B 1 25 ALA 25 176 176 ALA ALA B . n B 1 26 GLY 26 177 177 GLY GLY B . n B 1 27 ASN 27 178 178 ASN ASN B . n B 1 28 ILE 28 179 179 ILE ILE B . n B 1 29 SER 29 180 180 SER SER B . n B 1 30 ALA 30 181 181 ALA ALA B . n B 1 31 LEU 31 182 182 LEU LEU B . n B 1 32 ALA 32 183 183 ALA ALA B . n B 1 33 ASP 33 184 184 ASP ASP B . n B 1 34 ALA 34 185 185 ALA ALA B . n B 1 35 GLU 35 186 186 GLU GLU B . n B 1 36 ASN 36 187 187 ASN ASN B . n B 1 37 ILE 37 188 188 ILE ILE B . n B 1 38 SER 38 189 189 SER SER B . n B 1 39 ARG 39 190 190 ARG ARG B . n B 1 40 LYS 40 191 191 LYS LYS B . n B 1 41 ILE 41 192 192 ILE ILE B . n B 1 42 ILE 42 193 193 ILE ILE B . n B 1 43 THR 43 194 194 THR THR B . n B 1 44 ARG 44 195 195 ARG ARG B . n B 1 45 CYS 45 196 196 CYS CYS B . n B 1 46 ILE 46 197 197 ILE ILE B . n B 1 47 ASN 47 198 198 ASN ASN B . n B 1 48 THR 48 199 199 THR THR B . n B 1 49 ALA 49 200 200 ALA ALA B . n B 1 50 LYS 50 201 201 LYS LYS B . n B 1 51 LEU 51 202 202 LEU LEU B . n B 1 52 PRO 52 203 203 PRO PRO B . n B 1 53 LYS 53 204 204 LYS LYS B . n B 1 54 SER 54 205 205 SER SER B . n B 1 55 VAL 55 206 206 VAL VAL B . n B 1 56 VAL 56 207 207 VAL VAL B . n B 1 57 ALA 57 208 208 ALA ALA B . n B 1 58 LEU 58 209 209 LEU LEU B . n B 1 59 PHE 59 210 210 PHE PHE B . n B 1 60 SER 60 211 211 SER SER B . n B 1 61 HIS 61 212 212 HIS HIS B . n B 1 62 PRO 62 213 213 PRO PRO B . n B 1 63 GLY 63 214 214 GLY GLY B . n B 1 64 GLU 64 215 215 GLU GLU B . n B 1 65 LEU 65 216 216 LEU LEU B . n B 1 66 SER 66 217 217 SER SER B . n B 1 67 ALA 67 218 218 ALA ALA B . n B 1 68 ARG 68 219 219 ARG ARG B . n B 1 69 SER 69 220 220 SER SER B . n B 1 70 GLY 70 221 221 GLY GLY B . n B 1 71 ASP 71 222 222 ASP ASP B . n B 1 72 ALA 72 223 223 ALA ALA B . n B 1 73 LEU 73 224 224 LEU LEU B . n B 1 74 GLN 74 225 225 GLN GLN B . n B 1 75 LYS 75 226 226 LYS LYS B . n B 1 76 ALA 76 227 227 ALA ALA B . n B 1 77 PHE 77 228 228 PHE PHE B . n B 1 78 THR 78 229 229 THR THR B . n B 1 79 ASP 79 230 230 ASP ASP B . n B 1 80 LYS 80 231 231 LYS LYS B . n B 1 81 GLU 81 232 232 GLU GLU B . n B 1 82 GLU 82 233 233 GLU GLU B . n B 1 83 LEU 83 234 234 LEU LEU B . n B 1 84 LEU 84 235 235 LEU LEU B . n B 1 85 LYS 85 236 236 LYS LYS B . n B 1 86 GLN 86 237 237 GLN GLN B . n B 1 87 GLN 87 238 238 GLN GLN B . n B 1 88 ALA 88 239 239 ALA ALA B . n B 1 89 SER 89 240 240 SER SER B . n B 1 90 ASN 90 241 241 ASN ASN B . n B 1 91 LEU 91 242 242 LEU LEU B . n B 1 92 HIS 92 243 243 HIS HIS B . n B 1 93 GLU 93 244 244 GLU GLU B . n B 1 94 GLN 94 245 245 GLN GLN B . n B 1 95 LYS 95 246 246 LYS LYS B . n B 1 96 LYS 96 247 247 LYS LYS B . n B 1 97 ALA 97 248 248 ALA ALA B . n B 1 98 GLY 98 249 249 GLY GLY B . n B 1 99 VAL 99 250 250 VAL VAL B . n B 1 100 ILE 100 251 251 ILE ILE B . n B 1 101 PHE 101 252 252 PHE PHE B . n B 1 102 GLU 102 253 253 GLU GLU B . n B 1 103 ALA 103 254 254 ALA ALA B . n B 1 104 ASP 104 255 255 ASP ASP B . n B 1 105 GLU 105 256 256 GLU GLU B . n B 1 106 VAL 106 257 257 VAL VAL B . n B 1 107 ILE 107 258 258 ILE ILE B . n B 1 108 THR 108 259 259 THR THR B . n B 1 109 LEU 109 260 260 LEU LEU B . n B 1 110 LEU 110 261 261 LEU LEU B . n B 1 111 THR 111 262 262 THR THR B . n B 1 112 SER 112 263 263 SER SER B . n B 1 113 VAL 113 264 264 VAL VAL B . n B 1 114 LEU 114 265 265 LEU LEU B . n B 1 115 LYS 115 266 266 LYS LYS B . n B 1 116 THR 116 267 267 THR THR B . n B 1 117 SER 117 268 ? ? ? B . n B 1 118 SER 118 269 ? ? ? B . n B 1 119 ALA 119 270 ? ? ? B . n B 1 120 SER 120 271 ? ? ? B . n B 1 121 ARG 121 272 ? ? ? B . n C 2 1 DC 1 1 1 DC DC C . n C 2 2 DT 2 2 2 DT DT C . n C 2 3 DG 3 3 3 DG DG C . n C 2 4 DG 4 4 4 DG DG C . n C 2 5 DG 5 5 5 DG DG C . n C 2 6 DA 6 6 6 DA DA C . n C 2 7 DC 7 7 7 DC DC C . n C 2 8 DC 8 8 8 DC DC C . n C 2 9 DA 9 9 9 DA DA C . n C 2 10 DT 10 10 10 DT DT C . n C 2 11 DG 11 11 11 DG DG C . n C 2 12 DG 12 12 12 DG DG C . n C 2 13 DT 13 13 13 DT DT C . n C 2 14 DC 14 14 14 DC DC C . n C 2 15 DC 15 15 15 DC DC C . n C 2 16 DC 16 16 16 DC DC C . n C 2 17 DA 17 17 17 DA DA C . n C 2 18 DG 18 18 18 DG DG C . n D 2 1 DC 1 1 1 DC DC D . n D 2 2 DT 2 2 2 DT DT D . n D 2 3 DG 3 3 3 DG DG D . n D 2 4 DG 4 4 4 DG DG D . n D 2 5 DG 5 5 5 DG DG D . n D 2 6 DA 6 6 6 DA DA D . n D 2 7 DC 7 7 7 DC DC D . n D 2 8 DC 8 8 8 DC DC D . n D 2 9 DA 9 9 9 DA DA D . n D 2 10 DT 10 10 10 DT DT D . n D 2 11 DG 11 11 11 DG DG D . n D 2 12 DG 12 12 12 DG DG D . n D 2 13 DT 13 13 13 DT DT D . n D 2 14 DC 14 14 14 DC DC D . n D 2 15 DC 15 15 15 DC DC D . n D 2 16 DC 16 16 16 DC DC D . n D 2 17 DA 17 17 17 DA DA D . n D 2 18 DG 18 18 18 DG DG D . n E 1 1 GLY 1 152 ? ? ? U . n E 1 2 SER 2 153 ? ? ? U . n E 1 3 HIS 3 154 ? ? ? U . n E 1 4 TYR 4 155 ? ? ? U . n E 1 5 ARG 5 156 ? ? ? U . n E 1 6 PRO 6 157 157 PRO PRO U . n E 1 7 THR 7 158 158 THR THR U . n E 1 8 SER 8 159 159 SER SER U . n E 1 9 ALA 9 160 160 ALA ALA U . n E 1 10 TYR 10 161 161 TYR TYR U . n E 1 11 GLU 11 162 162 GLU GLU U . n E 1 12 ARG 12 163 163 ARG ARG U . n E 1 13 GLY 13 164 164 GLY GLY U . n E 1 14 GLN 14 165 165 GLN GLN U . n E 1 15 ARG 15 166 166 ARG ARG U . n E 1 16 TYR 16 167 167 TYR TYR U . n E 1 17 ALA 17 168 168 ALA ALA U . n E 1 18 SER 18 169 169 SER SER U . n E 1 19 ARG 19 170 170 ARG ARG U . n E 1 20 LEU 20 171 171 LEU LEU U . n E 1 21 GLN 21 172 172 GLN GLN U . n E 1 22 ASN 22 173 173 ASN ASN U . n E 1 23 GLU 23 174 174 GLU GLU U . n E 1 24 PHE 24 175 175 PHE PHE U . n E 1 25 ALA 25 176 176 ALA ALA U . n E 1 26 GLY 26 177 177 GLY GLY U . n E 1 27 ASN 27 178 178 ASN ASN U . n E 1 28 ILE 28 179 179 ILE ILE U . n E 1 29 SER 29 180 180 SER SER U . n E 1 30 ALA 30 181 181 ALA ALA U . n E 1 31 LEU 31 182 182 LEU LEU U . n E 1 32 ALA 32 183 183 ALA ALA U . n E 1 33 ASP 33 184 184 ASP ASP U . n E 1 34 ALA 34 185 185 ALA ALA U . n E 1 35 GLU 35 186 186 GLU GLU U . n E 1 36 ASN 36 187 187 ASN ASN U . n E 1 37 ILE 37 188 188 ILE ILE U . n E 1 38 SER 38 189 189 SER SER U . n E 1 39 ARG 39 190 190 ARG ARG U . n E 1 40 LYS 40 191 191 LYS LYS U . n E 1 41 ILE 41 192 192 ILE ILE U . n E 1 42 ILE 42 193 193 ILE ILE U . n E 1 43 THR 43 194 194 THR THR U . n E 1 44 ARG 44 195 195 ARG ARG U . n E 1 45 CYS 45 196 196 CYS CYS U . n E 1 46 ILE 46 197 197 ILE ILE U . n E 1 47 ASN 47 198 198 ASN ASN U . n E 1 48 THR 48 199 199 THR THR U . n E 1 49 ALA 49 200 200 ALA ALA U . n E 1 50 LYS 50 201 201 LYS LYS U . n E 1 51 LEU 51 202 202 LEU LEU U . n E 1 52 PRO 52 203 203 PRO PRO U . n E 1 53 LYS 53 204 204 LYS LYS U . n E 1 54 SER 54 205 205 SER SER U . n E 1 55 VAL 55 206 206 VAL VAL U . n E 1 56 VAL 56 207 207 VAL VAL U . n E 1 57 ALA 57 208 208 ALA ALA U . n E 1 58 LEU 58 209 209 LEU LEU U . n E 1 59 PHE 59 210 210 PHE PHE U . n E 1 60 SER 60 211 211 SER SER U . n E 1 61 HIS 61 212 212 HIS HIS U . n E 1 62 PRO 62 213 213 PRO PRO U . n E 1 63 GLY 63 214 214 GLY GLY U . n E 1 64 GLU 64 215 215 GLU GLU U . n E 1 65 LEU 65 216 216 LEU LEU U . n E 1 66 SER 66 217 217 SER SER U . n E 1 67 ALA 67 218 218 ALA ALA U . n E 1 68 ARG 68 219 219 ARG ARG U . n E 1 69 SER 69 220 220 SER SER U . n E 1 70 GLY 70 221 221 GLY GLY U . n E 1 71 ASP 71 222 222 ASP ASP U . n E 1 72 ALA 72 223 223 ALA ALA U . n E 1 73 LEU 73 224 224 LEU LEU U . n E 1 74 GLN 74 225 225 GLN GLN U . n E 1 75 LYS 75 226 226 LYS LYS U . n E 1 76 ALA 76 227 227 ALA ALA U . n E 1 77 PHE 77 228 228 PHE PHE U . n E 1 78 THR 78 229 229 THR THR U . n E 1 79 ASP 79 230 230 ASP ASP U . n E 1 80 LYS 80 231 231 LYS LYS U . n E 1 81 GLU 81 232 232 GLU GLU U . n E 1 82 GLU 82 233 233 GLU GLU U . n E 1 83 LEU 83 234 234 LEU LEU U . n E 1 84 LEU 84 235 235 LEU LEU U . n E 1 85 LYS 85 236 236 LYS LYS U . n E 1 86 GLN 86 237 237 GLN GLN U . n E 1 87 GLN 87 238 238 GLN GLN U . n E 1 88 ALA 88 239 239 ALA ALA U . n E 1 89 SER 89 240 240 SER SER U . n E 1 90 ASN 90 241 241 ASN ASN U . n E 1 91 LEU 91 242 242 LEU LEU U . n E 1 92 HIS 92 243 243 HIS HIS U . n E 1 93 GLU 93 244 244 GLU GLU U . n E 1 94 GLN 94 245 245 GLN GLN U . n E 1 95 LYS 95 246 246 LYS LYS U . n E 1 96 LYS 96 247 247 LYS LYS U . n E 1 97 ALA 97 248 248 ALA ALA U . n E 1 98 GLY 98 249 249 GLY GLY U . n E 1 99 VAL 99 250 250 VAL VAL U . n E 1 100 ILE 100 251 251 ILE ILE U . n E 1 101 PHE 101 252 252 PHE PHE U . n E 1 102 GLU 102 253 253 GLU GLU U . n E 1 103 ALA 103 254 254 ALA ALA U . n E 1 104 ASP 104 255 255 ASP ASP U . n E 1 105 GLU 105 256 256 GLU GLU U . n E 1 106 VAL 106 257 257 VAL VAL U . n E 1 107 ILE 107 258 258 ILE ILE U . n E 1 108 THR 108 259 259 THR THR U . n E 1 109 LEU 109 260 260 LEU LEU U . n E 1 110 LEU 110 261 261 LEU LEU U . n E 1 111 THR 111 262 262 THR THR U . n E 1 112 SER 112 263 263 SER SER U . n E 1 113 VAL 113 264 264 VAL VAL U . n E 1 114 LEU 114 265 265 LEU LEU U . n E 1 115 LYS 115 266 266 LYS LYS U . n E 1 116 THR 116 267 267 THR THR U . n E 1 117 SER 117 268 ? ? ? U . n E 1 118 SER 118 269 ? ? ? U . n E 1 119 ALA 119 270 ? ? ? U . n E 1 120 SER 120 271 ? ? ? U . n E 1 121 ARG 121 272 ? ? ? U . n F 2 1 DC 1 1 1 DC DC Y . n F 2 2 DT 2 2 2 DT DT Y . n F 2 3 DG 3 3 3 DG DG Y . n F 2 4 DG 4 4 4 DG DG Y . n F 2 5 DG 5 5 5 DG DG Y . n F 2 6 DA 6 6 6 DA DA Y . n F 2 7 DC 7 7 7 DC DC Y . n F 2 8 DC 8 8 8 DC DC Y . n F 2 9 DA 9 9 9 DA DA Y . n F 2 10 DT 10 10 10 DT DT Y . n F 2 11 DG 11 11 11 DG DG Y . n F 2 12 DG 12 12 12 DG DG Y . n F 2 13 DT 13 13 13 DT DT Y . n F 2 14 DC 14 14 14 DC DC Y . n F 2 15 DC 15 15 15 DC DC Y . n F 2 16 DC 16 16 16 DC DC Y . n F 2 17 DA 17 17 17 DA DA Y . n F 2 18 DG 18 18 18 DG DG Y . n G 2 1 DC 1 1 1 DC DC Z . n G 2 2 DT 2 2 2 DT DT Z . n G 2 3 DG 3 3 3 DG DG Z . n G 2 4 DG 4 4 4 DG DG Z . n G 2 5 DG 5 5 5 DG DG Z . n G 2 6 DA 6 6 6 DA DA Z . n G 2 7 DC 7 7 7 DC DC Z . n G 2 8 DC 8 8 8 DC DC Z . n G 2 9 DA 9 9 9 DA DA Z . n G 2 10 DT 10 10 10 DT DT Z . n G 2 11 DG 11 11 11 DG DG Z . n G 2 12 DG 12 12 12 DG DG Z . n G 2 13 DT 13 13 13 DT DT Z . n G 2 14 DC 14 14 14 DC DC Z . n G 2 15 DC 15 15 15 DC DC Z . n G 2 16 DC 16 16 16 DC DC Z . n G 2 17 DA 17 17 17 DA DA Z . n G 2 18 DG 18 18 18 DG DG Z . n H 1 1 GLY 1 152 ? ? ? N . n H 1 2 SER 2 153 ? ? ? N . n H 1 3 HIS 3 154 ? ? ? N . n H 1 4 TYR 4 155 ? ? ? N . n H 1 5 ARG 5 156 ? ? ? N . n H 1 6 PRO 6 157 157 PRO PRO N . n H 1 7 THR 7 158 158 THR THR N . n H 1 8 SER 8 159 159 SER SER N . n H 1 9 ALA 9 160 160 ALA ALA N . n H 1 10 TYR 10 161 161 TYR TYR N . n H 1 11 GLU 11 162 162 GLU GLU N . n H 1 12 ARG 12 163 163 ARG ARG N . n H 1 13 GLY 13 164 164 GLY GLY N . n H 1 14 GLN 14 165 165 GLN GLN N . n H 1 15 ARG 15 166 166 ARG ARG N . n H 1 16 TYR 16 167 167 TYR TYR N . n H 1 17 ALA 17 168 168 ALA ALA N . n H 1 18 SER 18 169 169 SER SER N . n H 1 19 ARG 19 170 170 ARG ARG N . n H 1 20 LEU 20 171 171 LEU LEU N . n H 1 21 GLN 21 172 172 GLN GLN N . n H 1 22 ASN 22 173 173 ASN ASN N . n H 1 23 GLU 23 174 174 GLU GLU N . n H 1 24 PHE 24 175 175 PHE PHE N . n H 1 25 ALA 25 176 176 ALA ALA N . n H 1 26 GLY 26 177 177 GLY GLY N . n H 1 27 ASN 27 178 178 ASN ASN N . n H 1 28 ILE 28 179 179 ILE ILE N . n H 1 29 SER 29 180 180 SER SER N . n H 1 30 ALA 30 181 181 ALA ALA N . n H 1 31 LEU 31 182 182 LEU LEU N . n H 1 32 ALA 32 183 183 ALA ALA N . n H 1 33 ASP 33 184 184 ASP ASP N . n H 1 34 ALA 34 185 185 ALA ALA N . n H 1 35 GLU 35 186 186 GLU GLU N . n H 1 36 ASN 36 187 187 ASN ASN N . n H 1 37 ILE 37 188 188 ILE ILE N . n H 1 38 SER 38 189 189 SER SER N . n H 1 39 ARG 39 190 190 ARG ARG N . n H 1 40 LYS 40 191 191 LYS LYS N . n H 1 41 ILE 41 192 192 ILE ILE N . n H 1 42 ILE 42 193 193 ILE ILE N . n H 1 43 THR 43 194 194 THR THR N . n H 1 44 ARG 44 195 195 ARG ARG N . n H 1 45 CYS 45 196 196 CYS CYS N . n H 1 46 ILE 46 197 197 ILE ILE N . n H 1 47 ASN 47 198 198 ASN ASN N . n H 1 48 THR 48 199 199 THR THR N . n H 1 49 ALA 49 200 200 ALA ALA N . n H 1 50 LYS 50 201 201 LYS LYS N . n H 1 51 LEU 51 202 202 LEU LEU N . n H 1 52 PRO 52 203 203 PRO PRO N . n H 1 53 LYS 53 204 204 LYS LYS N . n H 1 54 SER 54 205 205 SER SER N . n H 1 55 VAL 55 206 206 VAL VAL N . n H 1 56 VAL 56 207 207 VAL VAL N . n H 1 57 ALA 57 208 208 ALA ALA N . n H 1 58 LEU 58 209 209 LEU LEU N . n H 1 59 PHE 59 210 210 PHE PHE N . n H 1 60 SER 60 211 211 SER SER N . n H 1 61 HIS 61 212 212 HIS HIS N . n H 1 62 PRO 62 213 213 PRO PRO N . n H 1 63 GLY 63 214 214 GLY GLY N . n H 1 64 GLU 64 215 215 GLU GLU N . n H 1 65 LEU 65 216 216 LEU LEU N . n H 1 66 SER 66 217 217 SER SER N . n H 1 67 ALA 67 218 218 ALA ALA N . n H 1 68 ARG 68 219 219 ARG ARG N . n H 1 69 SER 69 220 220 SER SER N . n H 1 70 GLY 70 221 221 GLY GLY N . n H 1 71 ASP 71 222 222 ASP ASP N . n H 1 72 ALA 72 223 223 ALA ALA N . n H 1 73 LEU 73 224 224 LEU LEU N . n H 1 74 GLN 74 225 225 GLN GLN N . n H 1 75 LYS 75 226 226 LYS LYS N . n H 1 76 ALA 76 227 227 ALA ALA N . n H 1 77 PHE 77 228 228 PHE PHE N . n H 1 78 THR 78 229 229 THR THR N . n H 1 79 ASP 79 230 230 ASP ASP N . n H 1 80 LYS 80 231 231 LYS LYS N . n H 1 81 GLU 81 232 232 GLU GLU N . n H 1 82 GLU 82 233 233 GLU GLU N . n H 1 83 LEU 83 234 234 LEU LEU N . n H 1 84 LEU 84 235 235 LEU LEU N . n H 1 85 LYS 85 236 236 LYS LYS N . n H 1 86 GLN 86 237 237 GLN GLN N . n H 1 87 GLN 87 238 238 GLN GLN N . n H 1 88 ALA 88 239 239 ALA ALA N . n H 1 89 SER 89 240 240 SER SER N . n H 1 90 ASN 90 241 241 ASN ASN N . n H 1 91 LEU 91 242 242 LEU LEU N . n H 1 92 HIS 92 243 243 HIS HIS N . n H 1 93 GLU 93 244 244 GLU GLU N . n H 1 94 GLN 94 245 245 GLN GLN N . n H 1 95 LYS 95 246 246 LYS LYS N . n H 1 96 LYS 96 247 247 LYS LYS N . n H 1 97 ALA 97 248 248 ALA ALA N . n H 1 98 GLY 98 249 249 GLY GLY N . n H 1 99 VAL 99 250 250 VAL VAL N . n H 1 100 ILE 100 251 251 ILE ILE N . n H 1 101 PHE 101 252 252 PHE PHE N . n H 1 102 GLU 102 253 253 GLU GLU N . n H 1 103 ALA 103 254 254 ALA ALA N . n H 1 104 ASP 104 255 255 ASP ASP N . n H 1 105 GLU 105 256 256 GLU GLU N . n H 1 106 VAL 106 257 257 VAL VAL N . n H 1 107 ILE 107 258 258 ILE ILE N . n H 1 108 THR 108 259 259 THR THR N . n H 1 109 LEU 109 260 260 LEU LEU N . n H 1 110 LEU 110 261 261 LEU LEU N . n H 1 111 THR 111 262 262 THR THR N . n H 1 112 SER 112 263 263 SER SER N . n H 1 113 VAL 113 264 264 VAL VAL N . n H 1 114 LEU 114 265 265 LEU LEU N . n H 1 115 LYS 115 266 266 LYS LYS N . n H 1 116 THR 116 267 ? ? ? N . n H 1 117 SER 117 268 ? ? ? N . n H 1 118 SER 118 269 ? ? ? N . n H 1 119 ALA 119 270 ? ? ? N . n H 1 120 SER 120 271 ? ? ? N . n H 1 121 ARG 121 272 ? ? ? N . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 CA 1 1 1 CA CA A . J 3 CA 1 2 2 CA CA U . K 3 CA 1 19 3 CA CA Z . L 3 CA 1 20 4 CA CA Z . M 4 HOH 1 823 823 HOH TIP A . M 4 HOH 2 824 824 HOH TIP A . M 4 HOH 3 827 827 HOH TIP A . N 4 HOH 1 830 830 HOH TIP C . N 4 HOH 2 831 831 HOH TIP C . N 4 HOH 3 832 832 HOH TIP C . N 4 HOH 4 833 833 HOH TIP C . N 4 HOH 5 834 834 HOH TIP C . O 4 HOH 1 825 825 HOH TIP D . O 4 HOH 2 826 826 HOH TIP D . O 4 HOH 3 828 828 HOH TIP D . P 4 HOH 1 829 829 HOH TIP N . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA tetrameric 4 2 author_and_software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,H,I,M,N,O,P 2 1 E,F,G,J,K,L 2 2 B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4750 ? 1 MORE -41 ? 1 'SSA (A^2)' 16980 ? 2 'ABSA (A^2)' 4920 ? 2 MORE -57 ? 2 'SSA (A^2)' 16980 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 1_554 x,y,z-1 1.0000000000 0.0000000000 0.0000000000 51.7729736626 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 -106.2915429285 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-05-05 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2020-01-29 4 'Structure model' 1 3 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_struct_assembly 2 3 'Structure model' pdbx_struct_assembly_gen 3 3 'Structure model' pdbx_struct_assembly_prop 4 3 'Structure model' struct_ref_seq_dif 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' database_2 8 4 'Structure model' pdbx_initial_refinement_model 9 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_struct_assembly_prop.biol_id' 2 3 'Structure model' '_struct_ref_seq_dif.details' 3 4 'Structure model' '_database_2.pdbx_DOI' 4 4 'Structure model' '_database_2.pdbx_database_accession' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 MOLREP phasing . ? 2 CNS refinement 1.2 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 NZ _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 LYS _pdbx_validate_symm_contact.auth_seq_id_1 191 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O6 _pdbx_validate_symm_contact.auth_asym_id_2 Y _pdbx_validate_symm_contact.auth_comp_id_2 DG _pdbx_validate_symm_contact.auth_seq_id_2 5 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 1_556 _pdbx_validate_symm_contact.dist 2.09 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A LEU 171 ? ? CB A LEU 171 ? ? CG A LEU 171 ? ? 129.73 115.30 14.43 2.30 N 2 1 "O4'" C DA 17 ? ? "C1'" C DA 17 ? ? N9 C DA 17 ? ? 110.70 108.30 2.40 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 174 ? ? -149.41 -16.85 2 1 ALA A 176 ? ? 58.41 17.17 3 1 ASN A 187 ? ? 34.78 60.19 4 1 LEU A 209 ? ? -34.11 -33.58 5 1 LYS A 231 ? ? -161.88 17.59 6 1 ALA A 248 ? ? -68.21 14.41 7 1 THR A 267 ? ? -49.05 -90.92 8 1 LYS B 231 ? ? -166.33 23.06 9 1 VAL B 250 ? ? -35.52 136.94 10 1 ALA B 254 ? ? -24.92 -58.44 11 1 VAL B 264 ? ? -50.99 -4.49 12 1 LYS B 266 ? ? -78.67 -142.05 13 1 THR U 158 ? ? -38.95 130.65 14 1 ASN U 173 ? ? -89.91 43.27 15 1 GLU U 174 ? ? -162.47 -26.74 16 1 GLU U 186 ? ? -150.68 18.39 17 1 ASN U 187 ? ? 42.29 16.57 18 1 SER U 211 ? ? -39.92 -28.41 19 1 PRO U 213 ? ? -59.06 94.23 20 1 GLN U 225 ? ? -58.59 -5.25 21 1 ASP U 230 ? ? 70.58 30.15 22 1 LYS U 231 ? ? -153.00 11.22 23 1 VAL U 250 ? ? -27.16 105.47 24 1 LEU U 260 ? ? -92.62 -71.90 25 1 LEU U 261 ? ? -39.43 -30.63 26 1 VAL U 264 ? ? -59.93 0.62 27 1 LYS U 266 ? ? -49.99 173.06 28 1 THR N 158 ? ? 31.36 -101.95 29 1 SER N 159 ? ? -32.22 128.39 30 1 GLN N 172 ? ? -57.62 -88.59 31 1 GLU N 174 ? ? 172.37 -32.56 32 1 ALA N 176 ? ? 51.75 10.18 33 1 GLU N 186 ? ? -115.96 76.22 34 1 ASN N 187 ? ? -22.64 89.19 35 1 HIS N 212 ? ? 173.06 133.58 36 1 PHE N 228 ? ? -148.62 21.16 37 1 LYS N 231 ? ? -179.90 15.44 38 1 VAL N 250 ? ? -19.33 125.31 39 1 ALA N 254 ? ? -21.52 -80.06 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC C 1 ? ? 0.068 'SIDE CHAIN' 2 1 DC C 8 ? ? 0.090 'SIDE CHAIN' 3 1 DA C 17 ? ? 0.105 'SIDE CHAIN' 4 1 DC D 1 ? ? 0.074 'SIDE CHAIN' 5 1 DC D 8 ? ? 0.088 'SIDE CHAIN' 6 1 DC Y 1 ? ? 0.073 'SIDE CHAIN' 7 1 DC Y 7 ? ? 0.064 'SIDE CHAIN' 8 1 DC Y 8 ? ? 0.081 'SIDE CHAIN' 9 1 DG Y 12 ? ? 0.058 'SIDE CHAIN' 10 1 DA Y 17 ? ? 0.055 'SIDE CHAIN' 11 1 DC Z 1 ? ? 0.062 'SIDE CHAIN' 12 1 DA Z 17 ? ? 0.060 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 152 ? A GLY 1 2 1 Y 1 A SER 153 ? A SER 2 3 1 Y 1 A HIS 154 ? A HIS 3 4 1 Y 1 A TYR 155 ? A TYR 4 5 1 Y 1 A ARG 156 ? A ARG 5 6 1 Y 1 A SER 269 ? A SER 118 7 1 Y 1 A ALA 270 ? A ALA 119 8 1 Y 1 A SER 271 ? A SER 120 9 1 Y 1 A ARG 272 ? A ARG 121 10 1 Y 1 B GLY 152 ? B GLY 1 11 1 Y 1 B SER 153 ? B SER 2 12 1 Y 1 B HIS 154 ? B HIS 3 13 1 Y 1 B TYR 155 ? B TYR 4 14 1 Y 1 B ARG 156 ? B ARG 5 15 1 Y 1 B SER 268 ? B SER 117 16 1 Y 1 B SER 269 ? B SER 118 17 1 Y 1 B ALA 270 ? B ALA 119 18 1 Y 1 B SER 271 ? B SER 120 19 1 Y 1 B ARG 272 ? B ARG 121 20 1 Y 1 U GLY 152 ? E GLY 1 21 1 Y 1 U SER 153 ? E SER 2 22 1 Y 1 U HIS 154 ? E HIS 3 23 1 Y 1 U TYR 155 ? E TYR 4 24 1 Y 1 U ARG 156 ? E ARG 5 25 1 Y 1 U SER 268 ? E SER 117 26 1 Y 1 U SER 269 ? E SER 118 27 1 Y 1 U ALA 270 ? E ALA 119 28 1 Y 1 U SER 271 ? E SER 120 29 1 Y 1 U ARG 272 ? E ARG 121 30 1 Y 1 N GLY 152 ? H GLY 1 31 1 Y 1 N SER 153 ? H SER 2 32 1 Y 1 N HIS 154 ? H HIS 3 33 1 Y 1 N TYR 155 ? H TYR 4 34 1 Y 1 N ARG 156 ? H ARG 5 35 1 Y 1 N THR 267 ? H THR 116 36 1 Y 1 N SER 268 ? H SER 117 37 1 Y 1 N SER 269 ? H SER 118 38 1 Y 1 N ALA 270 ? H ALA 119 39 1 Y 1 N SER 271 ? H SER 120 40 1 Y 1 N ARG 272 ? H ARG 121 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 DA OP3 O N N 89 DA P P N N 90 DA OP1 O N N 91 DA OP2 O N N 92 DA "O5'" O N N 93 DA "C5'" C N N 94 DA "C4'" C N R 95 DA "O4'" O N N 96 DA "C3'" C N S 97 DA "O3'" O N N 98 DA "C2'" C N N 99 DA "C1'" C N R 100 DA N9 N Y N 101 DA C8 C Y N 102 DA N7 N Y N 103 DA C5 C Y N 104 DA C6 C Y N 105 DA N6 N N N 106 DA N1 N Y N 107 DA C2 C Y N 108 DA N3 N Y N 109 DA C4 C Y N 110 DA HOP3 H N N 111 DA HOP2 H N N 112 DA "H5'" H N N 113 DA "H5''" H N N 114 DA "H4'" H N N 115 DA "H3'" H N N 116 DA "HO3'" H N N 117 DA "H2'" H N N 118 DA "H2''" H N N 119 DA "H1'" H N N 120 DA H8 H N N 121 DA H61 H N N 122 DA H62 H N N 123 DA H2 H N N 124 DC OP3 O N N 125 DC P P N N 126 DC OP1 O N N 127 DC OP2 O N N 128 DC "O5'" O N N 129 DC "C5'" C N N 130 DC "C4'" C N R 131 DC "O4'" O N N 132 DC "C3'" C N S 133 DC "O3'" O N N 134 DC "C2'" C N N 135 DC "C1'" C N R 136 DC N1 N N N 137 DC C2 C N N 138 DC O2 O N N 139 DC N3 N N N 140 DC C4 C N N 141 DC N4 N N N 142 DC C5 C N N 143 DC C6 C N N 144 DC HOP3 H N N 145 DC HOP2 H N N 146 DC "H5'" H N N 147 DC "H5''" H N N 148 DC "H4'" H N N 149 DC "H3'" H N N 150 DC "HO3'" H N N 151 DC "H2'" H N N 152 DC "H2''" H N N 153 DC "H1'" H N N 154 DC H41 H N N 155 DC H42 H N N 156 DC H5 H N N 157 DC H6 H N N 158 DG OP3 O N N 159 DG P P N N 160 DG OP1 O N N 161 DG OP2 O N N 162 DG "O5'" O N N 163 DG "C5'" C N N 164 DG "C4'" C N R 165 DG "O4'" O N N 166 DG "C3'" C N S 167 DG "O3'" O N N 168 DG "C2'" C N N 169 DG "C1'" C N R 170 DG N9 N Y N 171 DG C8 C Y N 172 DG N7 N Y N 173 DG C5 C Y N 174 DG C6 C N N 175 DG O6 O N N 176 DG N1 N N N 177 DG C2 C N N 178 DG N2 N N N 179 DG N3 N N N 180 DG C4 C Y N 181 DG HOP3 H N N 182 DG HOP2 H N N 183 DG "H5'" H N N 184 DG "H5''" H N N 185 DG "H4'" H N N 186 DG "H3'" H N N 187 DG "HO3'" H N N 188 DG "H2'" H N N 189 DG "H2''" H N N 190 DG "H1'" H N N 191 DG H8 H N N 192 DG H1 H N N 193 DG H21 H N N 194 DG H22 H N N 195 DT OP3 O N N 196 DT P P N N 197 DT OP1 O N N 198 DT OP2 O N N 199 DT "O5'" O N N 200 DT "C5'" C N N 201 DT "C4'" C N R 202 DT "O4'" O N N 203 DT "C3'" C N S 204 DT "O3'" O N N 205 DT "C2'" C N N 206 DT "C1'" C N R 207 DT N1 N N N 208 DT C2 C N N 209 DT O2 O N N 210 DT N3 N N N 211 DT C4 C N N 212 DT O4 O N N 213 DT C5 C N N 214 DT C7 C N N 215 DT C6 C N N 216 DT HOP3 H N N 217 DT HOP2 H N N 218 DT "H5'" H N N 219 DT "H5''" H N N 220 DT "H4'" H N N 221 DT "H3'" H N N 222 DT "HO3'" H N N 223 DT "H2'" H N N 224 DT "H2''" H N N 225 DT "H1'" H N N 226 DT H3 H N N 227 DT H71 H N N 228 DT H72 H N N 229 DT H73 H N N 230 DT H6 H N N 231 GLN N N N N 232 GLN CA C N S 233 GLN C C N N 234 GLN O O N N 235 GLN CB C N N 236 GLN CG C N N 237 GLN CD C N N 238 GLN OE1 O N N 239 GLN NE2 N N N 240 GLN OXT O N N 241 GLN H H N N 242 GLN H2 H N N 243 GLN HA H N N 244 GLN HB2 H N N 245 GLN HB3 H N N 246 GLN HG2 H N N 247 GLN HG3 H N N 248 GLN HE21 H N N 249 GLN HE22 H N N 250 GLN HXT H N N 251 GLU N N N N 252 GLU CA C N S 253 GLU C C N N 254 GLU O O N N 255 GLU CB C N N 256 GLU CG C N N 257 GLU CD C N N 258 GLU OE1 O N N 259 GLU OE2 O N N 260 GLU OXT O N N 261 GLU H H N N 262 GLU H2 H N N 263 GLU HA H N N 264 GLU HB2 H N N 265 GLU HB3 H N N 266 GLU HG2 H N N 267 GLU HG3 H N N 268 GLU HE2 H N N 269 GLU HXT H N N 270 GLY N N N N 271 GLY CA C N N 272 GLY C C N N 273 GLY O O N N 274 GLY OXT O N N 275 GLY H H N N 276 GLY H2 H N N 277 GLY HA2 H N N 278 GLY HA3 H N N 279 GLY HXT H N N 280 HIS N N N N 281 HIS CA C N S 282 HIS C C N N 283 HIS O O N N 284 HIS CB C N N 285 HIS CG C Y N 286 HIS ND1 N Y N 287 HIS CD2 C Y N 288 HIS CE1 C Y N 289 HIS NE2 N Y N 290 HIS OXT O N N 291 HIS H H N N 292 HIS H2 H N N 293 HIS HA H N N 294 HIS HB2 H N N 295 HIS HB3 H N N 296 HIS HD1 H N N 297 HIS HD2 H N N 298 HIS HE1 H N N 299 HIS HE2 H N N 300 HIS HXT H N N 301 HOH O O N N 302 HOH H1 H N N 303 HOH H2 H N N 304 ILE N N N N 305 ILE CA C N S 306 ILE C C N N 307 ILE O O N N 308 ILE CB C N S 309 ILE CG1 C N N 310 ILE CG2 C N N 311 ILE CD1 C N N 312 ILE OXT O N N 313 ILE H H N N 314 ILE H2 H N N 315 ILE HA H N N 316 ILE HB H N N 317 ILE HG12 H N N 318 ILE HG13 H N N 319 ILE HG21 H N N 320 ILE HG22 H N N 321 ILE HG23 H N N 322 ILE HD11 H N N 323 ILE HD12 H N N 324 ILE HD13 H N N 325 ILE HXT H N N 326 LEU N N N N 327 LEU CA C N S 328 LEU C C N N 329 LEU O O N N 330 LEU CB C N N 331 LEU CG C N N 332 LEU CD1 C N N 333 LEU CD2 C N N 334 LEU OXT O N N 335 LEU H H N N 336 LEU H2 H N N 337 LEU HA H N N 338 LEU HB2 H N N 339 LEU HB3 H N N 340 LEU HG H N N 341 LEU HD11 H N N 342 LEU HD12 H N N 343 LEU HD13 H N N 344 LEU HD21 H N N 345 LEU HD22 H N N 346 LEU HD23 H N N 347 LEU HXT H N N 348 LYS N N N N 349 LYS CA C N S 350 LYS C C N N 351 LYS O O N N 352 LYS CB C N N 353 LYS CG C N N 354 LYS CD C N N 355 LYS CE C N N 356 LYS NZ N N N 357 LYS OXT O N N 358 LYS H H N N 359 LYS H2 H N N 360 LYS HA H N N 361 LYS HB2 H N N 362 LYS HB3 H N N 363 LYS HG2 H N N 364 LYS HG3 H N N 365 LYS HD2 H N N 366 LYS HD3 H N N 367 LYS HE2 H N N 368 LYS HE3 H N N 369 LYS HZ1 H N N 370 LYS HZ2 H N N 371 LYS HZ3 H N N 372 LYS HXT H N N 373 PHE N N N N 374 PHE CA C N S 375 PHE C C N N 376 PHE O O N N 377 PHE CB C N N 378 PHE CG C Y N 379 PHE CD1 C Y N 380 PHE CD2 C Y N 381 PHE CE1 C Y N 382 PHE CE2 C Y N 383 PHE CZ C Y N 384 PHE OXT O N N 385 PHE H H N N 386 PHE H2 H N N 387 PHE HA H N N 388 PHE HB2 H N N 389 PHE HB3 H N N 390 PHE HD1 H N N 391 PHE HD2 H N N 392 PHE HE1 H N N 393 PHE HE2 H N N 394 PHE HZ H N N 395 PHE HXT H N N 396 PRO N N N N 397 PRO CA C N S 398 PRO C C N N 399 PRO O O N N 400 PRO CB C N N 401 PRO CG C N N 402 PRO CD C N N 403 PRO OXT O N N 404 PRO H H N N 405 PRO HA H N N 406 PRO HB2 H N N 407 PRO HB3 H N N 408 PRO HG2 H N N 409 PRO HG3 H N N 410 PRO HD2 H N N 411 PRO HD3 H N N 412 PRO HXT H N N 413 SER N N N N 414 SER CA C N S 415 SER C C N N 416 SER O O N N 417 SER CB C N N 418 SER OG O N N 419 SER OXT O N N 420 SER H H N N 421 SER H2 H N N 422 SER HA H N N 423 SER HB2 H N N 424 SER HB3 H N N 425 SER HG H N N 426 SER HXT H N N 427 THR N N N N 428 THR CA C N S 429 THR C C N N 430 THR O O N N 431 THR CB C N R 432 THR OG1 O N N 433 THR CG2 C N N 434 THR OXT O N N 435 THR H H N N 436 THR H2 H N N 437 THR HA H N N 438 THR HB H N N 439 THR HG1 H N N 440 THR HG21 H N N 441 THR HG22 H N N 442 THR HG23 H N N 443 THR HXT H N N 444 TYR N N N N 445 TYR CA C N S 446 TYR C C N N 447 TYR O O N N 448 TYR CB C N N 449 TYR CG C Y N 450 TYR CD1 C Y N 451 TYR CD2 C Y N 452 TYR CE1 C Y N 453 TYR CE2 C Y N 454 TYR CZ C Y N 455 TYR OH O N N 456 TYR OXT O N N 457 TYR H H N N 458 TYR H2 H N N 459 TYR HA H N N 460 TYR HB2 H N N 461 TYR HB3 H N N 462 TYR HD1 H N N 463 TYR HD2 H N N 464 TYR HE1 H N N 465 TYR HE2 H N N 466 TYR HH H N N 467 TYR HXT H N N 468 VAL N N N N 469 VAL CA C N S 470 VAL C C N N 471 VAL O O N N 472 VAL CB C N N 473 VAL CG1 C N N 474 VAL CG2 C N N 475 VAL OXT O N N 476 VAL H H N N 477 VAL H2 H N N 478 VAL HA H N N 479 VAL HB H N N 480 VAL HG11 H N N 481 VAL HG12 H N N 482 VAL HG13 H N N 483 VAL HG21 H N N 484 VAL HG22 H N N 485 VAL HG23 H N N 486 VAL HXT H N N 487 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 PHE N CA sing N N 367 PHE N H sing N N 368 PHE N H2 sing N N 369 PHE CA C sing N N 370 PHE CA CB sing N N 371 PHE CA HA sing N N 372 PHE C O doub N N 373 PHE C OXT sing N N 374 PHE CB CG sing N N 375 PHE CB HB2 sing N N 376 PHE CB HB3 sing N N 377 PHE CG CD1 doub Y N 378 PHE CG CD2 sing Y N 379 PHE CD1 CE1 sing Y N 380 PHE CD1 HD1 sing N N 381 PHE CD2 CE2 doub Y N 382 PHE CD2 HD2 sing N N 383 PHE CE1 CZ doub Y N 384 PHE CE1 HE1 sing N N 385 PHE CE2 CZ sing Y N 386 PHE CE2 HE2 sing N N 387 PHE CZ HZ sing N N 388 PHE OXT HXT sing N N 389 PRO N CA sing N N 390 PRO N CD sing N N 391 PRO N H sing N N 392 PRO CA C sing N N 393 PRO CA CB sing N N 394 PRO CA HA sing N N 395 PRO C O doub N N 396 PRO C OXT sing N N 397 PRO CB CG sing N N 398 PRO CB HB2 sing N N 399 PRO CB HB3 sing N N 400 PRO CG CD sing N N 401 PRO CG HG2 sing N N 402 PRO CG HG3 sing N N 403 PRO CD HD2 sing N N 404 PRO CD HD3 sing N N 405 PRO OXT HXT sing N N 406 SER N CA sing N N 407 SER N H sing N N 408 SER N H2 sing N N 409 SER CA C sing N N 410 SER CA CB sing N N 411 SER CA HA sing N N 412 SER C O doub N N 413 SER C OXT sing N N 414 SER CB OG sing N N 415 SER CB HB2 sing N N 416 SER CB HB3 sing N N 417 SER OG HG sing N N 418 SER OXT HXT sing N N 419 THR N CA sing N N 420 THR N H sing N N 421 THR N H2 sing N N 422 THR CA C sing N N 423 THR CA CB sing N N 424 THR CA HA sing N N 425 THR C O doub N N 426 THR C OXT sing N N 427 THR CB OG1 sing N N 428 THR CB CG2 sing N N 429 THR CB HB sing N N 430 THR OG1 HG1 sing N N 431 THR CG2 HG21 sing N N 432 THR CG2 HG22 sing N N 433 THR CG2 HG23 sing N N 434 THR OXT HXT sing N N 435 TYR N CA sing N N 436 TYR N H sing N N 437 TYR N H2 sing N N 438 TYR CA C sing N N 439 TYR CA CB sing N N 440 TYR CA HA sing N N 441 TYR C O doub N N 442 TYR C OXT sing N N 443 TYR CB CG sing N N 444 TYR CB HB2 sing N N 445 TYR CB HB3 sing N N 446 TYR CG CD1 doub Y N 447 TYR CG CD2 sing Y N 448 TYR CD1 CE1 sing Y N 449 TYR CD1 HD1 sing N N 450 TYR CD2 CE2 doub Y N 451 TYR CD2 HD2 sing N N 452 TYR CE1 CZ doub Y N 453 TYR CE1 HE1 sing N N 454 TYR CE2 CZ sing Y N 455 TYR CE2 HE2 sing N N 456 TYR CZ OH sing N N 457 TYR OH HH sing N N 458 TYR OXT HXT sing N N 459 VAL N CA sing N N 460 VAL N H sing N N 461 VAL N H2 sing N N 462 VAL CA C sing N N 463 VAL CA CB sing N N 464 VAL CA HA sing N N 465 VAL C O doub N N 466 VAL C OXT sing N N 467 VAL CB CG1 sing N N 468 VAL CB CG2 sing N N 469 VAL CB HB sing N N 470 VAL CG1 HG11 sing N N 471 VAL CG1 HG12 sing N N 472 VAL CG1 HG13 sing N N 473 VAL CG2 HG21 sing N N 474 VAL CG2 HG22 sing N N 475 VAL CG2 HG23 sing N N 476 VAL OXT HXT sing N N 477 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3MKZ 'double helix' 3MKZ 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DC 1 1_555 D DG 18 1_555 -0.117 -0.425 0.207 -19.117 -4.899 -5.373 1 C_DC1:DG18_D C 1 ? D 18 ? 19 1 1 C DT 2 1_555 D DA 17 1_555 -1.476 -0.189 -0.186 -16.844 -0.901 -8.114 2 C_DT2:DA17_D C 2 ? D 17 ? 20 1 1 C DG 3 1_555 D DC 16 1_555 -1.024 -0.285 0.137 10.344 2.427 -3.427 3 C_DG3:DC16_D C 3 ? D 16 ? 19 1 1 C DG 4 1_555 D DC 15 1_555 0.130 -0.100 0.107 3.450 -5.810 1.285 4 C_DG4:DC15_D C 4 ? D 15 ? 19 1 1 C DG 5 1_555 D DC 14 1_555 -0.813 -0.571 -0.230 4.415 -6.919 -4.188 5 C_DG5:DC14_D C 5 ? D 14 ? 19 1 1 C DA 6 1_555 D DT 13 1_555 -0.099 0.082 0.081 6.021 -8.612 -12.368 6 C_DA6:DT13_D C 6 ? D 13 ? 20 1 1 C DC 7 1_555 D DG 12 1_555 0.560 -0.128 -0.127 8.134 -2.759 2.726 7 C_DC7:DG12_D C 7 ? D 12 ? 19 1 1 C DC 8 1_555 D DG 11 1_555 0.897 0.027 0.047 -7.310 -3.585 4.554 8 C_DC8:DG11_D C 8 ? D 11 ? 19 1 1 C DA 9 1_555 D DT 10 1_555 0.452 0.105 0.131 5.469 -5.868 3.157 9 C_DA9:DT10_D C 9 ? D 10 ? 20 1 1 C DT 10 1_555 D DA 9 1_555 -0.032 -0.038 0.056 -6.041 -5.801 -1.438 10 C_DT10:DA9_D C 10 ? D 9 ? 20 1 1 C DG 11 1_555 D DC 8 1_555 0.285 -0.276 0.240 11.789 -4.330 -3.893 11 C_DG11:DC8_D C 11 ? D 8 ? 19 1 1 C DG 12 1_555 D DC 7 1_555 -0.705 -0.073 -0.040 -2.784 -1.476 10.542 12 C_DG12:DC7_D C 12 ? D 7 ? 19 1 1 C DT 13 1_555 D DA 6 1_555 0.082 -0.081 0.044 1.673 -3.026 -5.496 13 C_DT13:DA6_D C 13 ? D 6 ? 20 1 1 C DC 14 1_555 D DG 5 1_555 0.146 -0.294 -0.527 7.714 -6.338 -3.848 14 C_DC14:DG5_D C 14 ? D 5 ? 19 1 1 C DC 15 1_555 D DG 4 1_555 0.270 -0.240 -0.094 1.335 -6.697 1.147 15 C_DC15:DG4_D C 15 ? D 4 ? 19 1 1 C DC 16 1_555 D DG 3 1_555 0.091 -0.359 0.159 -7.226 -3.132 -6.746 16 C_DC16:DG3_D C 16 ? D 3 ? 19 1 1 C DA 17 1_555 D DT 2 1_555 0.091 0.015 0.232 17.816 -1.396 7.550 17 C_DA17:DT2_D C 17 ? D 2 ? 20 1 1 C DG 18 1_555 D DC 1 1_555 0.013 0.266 1.031 40.182 0.213 0.160 18 C_DG18:DC1_D C 18 ? D 1 ? 19 1 1 F DC 1 1_555 G DG 18 1_555 -0.006 0.006 0.412 -22.104 -7.393 0.641 19 Y_DC1:DG18_Z Y 1 ? Z 18 ? 19 1 1 F DT 2 1_555 G DA 17 1_555 -0.236 0.020 0.512 -21.239 1.066 2.673 20 Y_DT2:DA17_Z Y 2 ? Z 17 ? 20 1 1 F DG 3 1_555 G DC 16 1_555 -0.854 -0.307 -0.109 0.693 1.831 -4.066 21 Y_DG3:DC16_Z Y 3 ? Z 16 ? 19 1 1 F DG 4 1_555 G DC 15 1_555 -0.201 -0.059 0.068 0.683 -5.706 0.386 22 Y_DG4:DC15_Z Y 4 ? Z 15 ? 19 1 1 F DG 5 1_555 G DC 14 1_555 -0.796 -0.262 -0.026 0.580 -4.355 2.650 23 Y_DG5:DC14_Z Y 5 ? Z 14 ? 19 1 1 F DA 6 1_555 G DT 13 1_555 0.492 -0.129 0.078 -0.726 -6.393 -8.214 24 Y_DA6:DT13_Z Y 6 ? Z 13 ? 20 1 1 F DC 7 1_555 G DG 12 1_555 -0.188 -0.360 -0.188 3.507 -3.109 -0.221 25 Y_DC7:DG12_Z Y 7 ? Z 12 ? 19 1 1 F DC 8 1_555 G DG 11 1_555 0.861 -0.219 0.031 -10.632 -2.340 6.549 26 Y_DC8:DG11_Z Y 8 ? Z 11 ? 19 1 1 F DA 9 1_555 G DT 10 1_555 -0.296 -0.097 -0.063 6.075 -8.671 -2.590 27 Y_DA9:DT10_Z Y 9 ? Z 10 ? 20 1 1 F DT 10 1_555 G DA 9 1_555 -0.193 0.070 -0.135 -5.880 -9.627 4.665 28 Y_DT10:DA9_Z Y 10 ? Z 9 ? 20 1 1 F DG 11 1_555 G DC 8 1_555 -0.125 -0.323 0.134 7.998 -1.711 -2.544 29 Y_DG11:DC8_Z Y 11 ? Z 8 ? 19 1 1 F DG 12 1_555 G DC 7 1_555 -0.629 -0.184 -0.096 -8.529 -4.459 7.696 30 Y_DG12:DC7_Z Y 12 ? Z 7 ? 19 1 1 F DT 13 1_555 G DA 6 1_555 -0.184 -0.004 -0.119 -2.555 -7.766 -3.889 31 Y_DT13:DA6_Z Y 13 ? Z 6 ? 20 1 1 F DC 14 1_555 G DG 5 1_555 -0.086 -0.248 -0.088 1.180 -8.556 0.987 32 Y_DC14:DG5_Z Y 14 ? Z 5 ? 19 1 1 F DC 15 1_555 G DG 4 1_555 0.257 -0.067 0.060 -5.446 -2.414 4.847 33 Y_DC15:DG4_Z Y 15 ? Z 4 ? 19 1 1 F DC 16 1_555 G DG 3 1_555 0.427 -0.256 0.221 -6.421 0.724 -2.381 34 Y_DC16:DG3_Z Y 16 ? Z 3 ? 19 1 1 F DA 17 1_555 G DT 2 1_555 1.018 -0.007 0.199 16.853 1.619 5.461 35 Y_DA17:DT2_Z Y 17 ? Z 2 ? 20 1 1 F DG 18 1_555 G DC 1 1_555 -0.550 -0.110 0.560 25.054 -5.060 7.554 36 Y_DG18:DC1_Z Y 18 ? Z 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DC 1 1_555 D DG 18 1_555 C DT 2 1_555 D DA 17 1_555 0.603 -0.757 3.347 6.316 3.845 29.847 -2.204 0.137 3.282 7.324 -12.032 30.729 1 CC_DC1DT2:DA17DG18_DD C 1 ? D 18 ? C 2 ? D 17 ? 1 C DT 2 1_555 D DA 17 1_555 C DG 3 1_555 D DC 16 1_555 -0.296 0.778 2.916 -4.038 2.115 28.873 1.125 -0.207 2.976 4.209 8.035 29.223 2 CC_DT2DG3:DC16DA17_DD C 2 ? D 17 ? C 3 ? D 16 ? 1 C DG 3 1_555 D DC 16 1_555 C DG 4 1_555 D DC 15 1_555 0.236 -0.260 3.452 0.951 3.188 45.434 -0.631 -0.217 3.431 4.120 -1.229 45.549 3 CC_DG3DG4:DC15DC16_DD C 3 ? D 16 ? C 4 ? D 15 ? 1 C DG 4 1_555 D DC 15 1_555 C DG 5 1_555 D DC 14 1_555 0.105 -0.220 3.299 2.982 2.337 28.599 -0.966 0.459 3.264 4.704 -6.003 28.844 4 CC_DG4DG5:DC14DC15_DD C 4 ? D 15 ? C 5 ? D 14 ? 1 C DG 5 1_555 D DC 14 1_555 C DA 6 1_555 D DT 13 1_555 -0.318 -0.169 3.271 -1.721 0.937 36.066 -0.405 0.269 3.277 1.512 2.777 36.118 5 CC_DG5DA6:DT13DC14_DD C 5 ? D 14 ? C 6 ? D 13 ? 1 C DA 6 1_555 D DT 13 1_555 C DC 7 1_555 D DG 12 1_555 1.246 -0.860 3.251 0.815 4.212 37.043 -1.894 -1.842 3.163 6.603 -1.277 37.282 6 CC_DA6DC7:DG12DT13_DD C 6 ? D 13 ? C 7 ? D 12 ? 1 C DC 7 1_555 D DG 12 1_555 C DC 8 1_555 D DG 11 1_555 -0.486 -0.967 3.672 0.232 4.838 29.671 -2.955 0.989 3.471 9.368 -0.450 30.055 7 CC_DC7DC8:DG11DG12_DD C 7 ? D 12 ? C 8 ? D 11 ? 1 C DC 8 1_555 D DG 11 1_555 C DA 9 1_555 D DT 10 1_555 -0.295 0.618 3.042 2.095 9.806 31.677 -0.492 0.853 3.066 17.426 -3.722 33.188 8 CC_DC8DA9:DT10DG11_DD C 8 ? D 11 ? C 9 ? D 10 ? 1 C DA 9 1_555 D DT 10 1_555 C DT 10 1_555 D DA 9 1_555 0.069 -0.918 3.555 -0.853 -5.738 31.584 -0.514 -0.295 3.657 -10.432 1.551 32.099 9 CC_DA9DT10:DA9DT10_DD C 9 ? D 10 ? C 10 ? D 9 ? 1 C DT 10 1_555 D DA 9 1_555 C DG 11 1_555 D DC 8 1_555 0.002 0.591 2.904 -1.943 5.316 37.894 0.302 -0.223 2.954 8.130 2.971 38.299 10 CC_DT10DG11:DC8DA9_DD C 10 ? D 9 ? C 11 ? D 8 ? 1 C DG 11 1_555 D DC 8 1_555 C DG 12 1_555 D DC 7 1_555 1.123 -1.104 3.549 -0.050 7.381 24.048 -4.785 -2.595 3.076 17.203 0.116 25.140 11 CC_DG11DG12:DC7DC8_DD C 11 ? D 8 ? C 12 ? D 7 ? 1 C DG 12 1_555 D DC 7 1_555 C DT 13 1_555 D DA 6 1_555 -1.222 -0.936 3.282 1.201 1.171 36.342 -1.661 2.123 3.211 1.877 -1.924 36.379 12 CC_DG12DT13:DA6DC7_DD C 12 ? D 7 ? C 13 ? D 6 ? 1 C DT 13 1_555 D DA 6 1_555 C DC 14 1_555 D DG 5 1_555 0.419 0.029 3.124 5.928 0.832 33.594 -0.079 0.195 3.150 1.426 -10.157 34.108 13 CC_DT13DC14:DG5DA6_DD C 13 ? D 6 ? C 14 ? D 5 ? 1 C DC 14 1_555 D DG 5 1_555 C DC 15 1_555 D DG 4 1_555 -0.081 0.020 3.561 -3.577 5.625 34.024 -0.909 -0.465 3.510 9.499 6.041 34.652 14 CC_DC14DC15:DG4DG5_DD C 14 ? D 5 ? C 15 ? D 4 ? 1 C DC 15 1_555 D DG 4 1_555 C DC 16 1_555 D DG 3 1_555 -0.188 -0.046 3.594 0.052 -1.230 37.111 0.109 0.304 3.593 -1.932 -0.082 37.130 15 CC_DC15DC16:DG3DG4_DD C 15 ? D 4 ? C 16 ? D 3 ? 1 C DC 16 1_555 D DG 3 1_555 C DA 17 1_555 D DT 2 1_555 1.460 0.530 2.839 -0.424 10.027 22.409 -1.543 -3.554 2.786 24.296 1.027 24.528 16 CC_DC16DA17:DT2DG3_DD C 16 ? D 3 ? C 17 ? D 2 ? 1 C DA 17 1_555 D DT 2 1_555 C DG 18 1_555 D DC 1 1_555 -0.584 -0.297 2.880 -8.084 -0.322 37.900 -0.412 -0.011 2.941 -0.489 12.276 38.723 17 CC_DA17DG18:DC1DT2_DD C 17 ? D 2 ? C 18 ? D 1 ? 1 F DC 1 1_555 G DG 18 1_555 F DT 2 1_555 G DA 17 1_555 0.736 -0.386 3.335 2.985 1.744 36.790 -0.850 -0.749 3.361 2.756 -4.717 36.947 18 YY_DC1DT2:DA17DG18_ZZ Y 1 ? Z 18 ? Y 2 ? Z 17 ? 1 F DT 2 1_555 G DA 17 1_555 F DG 3 1_555 G DC 16 1_555 -0.772 0.090 2.922 5.472 8.269 20.768 -2.311 3.615 2.493 21.433 -14.181 22.991 19 YY_DT2DG3:DC16DA17_ZZ Y 2 ? Z 17 ? Y 3 ? Z 16 ? 1 F DG 3 1_555 G DC 16 1_555 F DG 4 1_555 G DC 15 1_555 0.136 -0.204 3.293 -2.342 2.070 39.864 -0.538 -0.469 3.266 3.031 3.429 39.982 20 YY_DG3DG4:DC15DC16_ZZ Y 3 ? Z 16 ? Y 4 ? Z 15 ? 1 F DG 4 1_555 G DC 15 1_555 F DG 5 1_555 G DC 14 1_555 -0.096 -0.088 3.371 -0.749 1.633 32.832 -0.443 0.038 3.364 2.886 1.325 32.880 21 YY_DG4DG5:DC14DC15_ZZ Y 4 ? Z 15 ? Y 5 ? Z 14 ? 1 F DG 5 1_555 G DC 14 1_555 F DA 6 1_555 G DT 13 1_555 -0.486 -0.248 3.374 -0.990 1.176 40.557 -0.492 0.587 3.376 1.696 1.428 40.585 22 YY_DG5DA6:DT13DC14_ZZ Y 5 ? Z 14 ? Y 6 ? Z 13 ? 1 F DA 6 1_555 G DT 13 1_555 F DC 7 1_555 G DG 12 1_555 0.745 -0.917 3.182 -0.978 3.729 30.460 -2.430 -1.590 3.026 7.061 1.853 30.698 23 YY_DA6DC7:DG12DT13_ZZ Y 6 ? Z 13 ? Y 7 ? Z 12 ? 1 F DC 7 1_555 G DG 12 1_555 F DC 8 1_555 G DG 11 1_555 -0.295 -0.694 3.567 -0.673 7.455 33.365 -2.442 0.388 3.344 12.785 1.154 34.172 24 YY_DC7DC8:DG11DG12_ZZ Y 7 ? Z 12 ? Y 8 ? Z 11 ? 1 F DC 8 1_555 G DG 11 1_555 F DA 9 1_555 G DT 10 1_555 -0.744 0.659 3.022 2.109 7.719 28.768 -0.235 1.859 3.031 15.169 -4.145 29.838 25 YY_DC8DA9:DT10DG11_ZZ Y 8 ? Z 11 ? Y 9 ? Z 10 ? 1 F DA 9 1_555 G DT 10 1_555 F DT 10 1_555 G DA 9 1_555 0.199 -0.865 3.552 1.216 -7.757 35.356 -0.174 -0.129 3.659 -12.581 -1.973 36.190 26 YY_DA9DT10:DA9DT10_ZZ Y 9 ? Z 10 ? Y 10 ? Z 9 ? 1 F DT 10 1_555 G DA 9 1_555 F DG 11 1_555 G DC 8 1_555 -0.036 0.917 3.054 -2.850 7.936 35.828 0.410 -0.318 3.172 12.685 4.555 36.776 27 YY_DT10DG11:DC8DA9_ZZ Y 10 ? Z 9 ? Y 11 ? Z 8 ? 1 F DG 11 1_555 G DC 8 1_555 F DG 12 1_555 G DC 7 1_555 1.128 -1.315 3.625 1.278 6.796 27.629 -4.337 -1.982 3.263 13.955 -2.625 28.465 28 YY_DG11DG12:DC7DC8_ZZ Y 11 ? Z 8 ? Y 12 ? Z 7 ? 1 F DG 12 1_555 G DC 7 1_555 F DT 13 1_555 G DA 6 1_555 -0.900 -0.774 3.158 1.854 1.214 34.188 -1.496 1.806 3.078 2.062 -3.149 34.257 29 YY_DG12DT13:DA6DC7_ZZ Y 12 ? Z 7 ? Y 13 ? Z 6 ? 1 F DT 13 1_555 G DA 6 1_555 F DC 14 1_555 G DG 5 1_555 0.529 -0.045 3.258 2.063 3.115 34.844 -0.543 -0.568 3.267 5.183 -3.433 35.038 30 YY_DT13DC14:DG5DA6_ZZ Y 13 ? Z 6 ? Y 14 ? Z 5 ? 1 F DC 14 1_555 G DG 5 1_555 F DC 15 1_555 G DG 4 1_555 0.106 -0.170 3.411 -1.199 4.250 35.280 -0.924 -0.355 3.363 6.978 1.969 35.547 31 YY_DC14DC15:DG4DG5_ZZ Y 14 ? Z 5 ? Y 15 ? Z 4 ? 1 F DC 15 1_555 G DG 4 1_555 F DC 16 1_555 G DG 3 1_555 -0.259 -0.237 3.365 -0.101 1.889 39.549 -0.577 0.370 3.351 2.789 0.149 39.593 32 YY_DC15DC16:DG3DG4_ZZ Y 15 ? Z 4 ? Y 16 ? Z 3 ? 1 F DC 16 1_555 G DG 3 1_555 F DA 17 1_555 G DT 2 1_555 0.729 0.681 2.872 -0.296 6.434 29.297 0.123 -1.465 2.944 12.530 0.577 29.981 33 YY_DC16DA17:DT2DG3_ZZ Y 16 ? Z 3 ? Y 17 ? Z 2 ? 1 F DA 17 1_555 G DT 2 1_555 F DG 18 1_555 G DC 1 1_555 -0.668 -0.383 3.200 -5.423 0.872 29.553 -0.917 0.182 3.256 1.691 10.517 30.048 34 YY_DA17DG18:DC1DT2_ZZ Y 17 ? Z 2 ? Y 18 ? Z 1 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CALCIUM ION' CA 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3MKW _pdbx_initial_refinement_model.details 'PDB entry 3MKW' #