HEADER DE NOVO PROTEIN 16-APR-10 3MLG TITLE 2OUF-2X, A DESIGNED KNOTTED PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2X CHIMERA OF HELICOBACTER PYLORI PROTEIN HP0242; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI; SOURCE 3 ORGANISM_TAXID: 85962; SOURCE 4 STRAIN: ATCC 700392 / 26695; SOURCE 5 GENE: HP_0242; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS KNOT, DESIGNED PROTEIN, FUSION PROTEIN, CHIMERA PROTEIN, DE NOVO KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.P.KING,M.R.SAWAYA,A.W.JACOBITZ,T.O.YEATES REVDAT 6 06-SEP-23 3MLG 1 REMARK REVDAT 5 26-JUL-17 3MLG 1 COMPND SOURCE KEYWDS REMARK REVDAT 5 2 1 DBREF SEQADV REVDAT 4 09-APR-14 3MLG 1 SOURCE VERSN REVDAT 3 08-DEC-10 3MLG 1 JRNL REVDAT 2 08-SEP-10 3MLG 1 REMARK REVDAT 1 12-MAY-10 3MLG 0 JRNL AUTH N.P.KING,A.W.JACOBITZ,M.R.SAWAYA,L.GOLDSCHMIDT,T.O.YEATES JRNL TITL STRUCTURE AND FOLDING OF A DESIGNED KNOTTED PROTEIN. JRNL REF PROC.NATL.ACAD.SCI.USA V. 107 20732 2010 JRNL REFN ISSN 0027-8424 JRNL PMID 21068371 JRNL DOI 10.1073/PNAS.1007602107 REMARK 2 REMARK 2 RESOLUTION. 2.29 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.29 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 17260 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.250 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 873 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 9 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.29 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.43 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 1630 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2420 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1545 REMARK 3 BIN R VALUE (WORKING SET) : 0.2410 REMARK 3 BIN FREE R VALUE : 0.2680 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.21 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 85 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2520 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 50 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.26300 REMARK 3 B22 (A**2) : 4.69500 REMARK 3 B33 (A**2) : -6.95800 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.482 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.905 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.883 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2548 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3425 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 943 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 82 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 350 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2548 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 352 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3128 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.15 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.22 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 20.88 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|13 - A|181 } REMARK 3 ORIGIN FOR THE GROUP (A): -3.6624 -7.2311 11.4890 REMARK 3 T TENSOR REMARK 3 T11: -0.1464 T22: -0.1554 REMARK 3 T33: -0.3132 T12: 0.0391 REMARK 3 T13: 0.0066 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 5.4759 L22: 5.7519 REMARK 3 L33: 8.6876 L12: -1.6133 REMARK 3 L13: -0.6245 L23: -2.6954 REMARK 3 S TENSOR REMARK 3 S11: 0.1202 S12: 0.2502 S13: -0.1777 REMARK 3 S21: 0.3040 S22: 0.0092 S23: -0.0073 REMARK 3 S31: 0.3845 S32: 0.0956 S33: -0.1294 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|13 - B|181 } REMARK 3 ORIGIN FOR THE GROUP (A): -3.8991 7.1421 -18.0769 REMARK 3 T TENSOR REMARK 3 T11: -0.1686 T22: -0.1242 REMARK 3 T33: -0.3142 T12: -0.0936 REMARK 3 T13: -0.0164 T23: 0.0228 REMARK 3 L TENSOR REMARK 3 L11: 5.2623 L22: 5.7137 REMARK 3 L33: 7.7867 L12: 1.5189 REMARK 3 L13: 1.6134 L23: -1.0761 REMARK 3 S TENSOR REMARK 3 S11: 0.0633 S12: 0.0089 S13: 0.2750 REMARK 3 S21: -0.5520 S22: 0.0013 S23: 0.0045 REMARK 3 S31: -0.3276 S32: 0.6878 S33: -0.0646 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3MLG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-APR-10. REMARK 100 THE DEPOSITION ID IS D_1000058692. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97910 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17338 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.290 REMARK 200 RESOLUTION RANGE LOW (A) : 90.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.8 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 43.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.45100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: 2OUF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8% PEG 8000, 0.1 M NA+/K+ PHOSPHATE PH REMARK 280 6.2, 0.1 M SODIUM CHLORIDE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.47100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.28650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.69500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.28650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.47100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.69500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -22.47100 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 59.28650 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 ASP A 3 REMARK 465 TYR A 4 REMARK 465 SER A 5 REMARK 465 GLU A 6 REMARK 465 LEU A 7 REMARK 465 GLU A 8 REMARK 465 ILE A 9 REMARK 465 PHE A 10 REMARK 465 GLU A 11 REMARK 465 GLY A 12 REMARK 465 SER A 93 REMARK 465 GLY A 94 REMARK 465 SER A 95 REMARK 465 GLY A 96 REMARK 465 SER A 97 REMARK 465 GLY A 98 REMARK 465 SER A 99 REMARK 465 SER A 100 REMARK 465 LEU A 182 REMARK 465 GLU A 183 REMARK 465 HIS A 184 REMARK 465 HIS A 185 REMARK 465 HIS A 186 REMARK 465 HIS A 187 REMARK 465 HIS A 188 REMARK 465 HIS A 189 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 ASP B 3 REMARK 465 TYR B 4 REMARK 465 SER B 5 REMARK 465 GLU B 6 REMARK 465 LEU B 7 REMARK 465 GLU B 8 REMARK 465 ILE B 9 REMARK 465 PHE B 10 REMARK 465 GLU B 11 REMARK 465 GLY B 12 REMARK 465 SER B 93 REMARK 465 GLY B 94 REMARK 465 SER B 95 REMARK 465 GLY B 96 REMARK 465 SER B 97 REMARK 465 GLY B 98 REMARK 465 SER B 99 REMARK 465 SER B 100 REMARK 465 LEU B 182 REMARK 465 GLU B 183 REMARK 465 HIS B 184 REMARK 465 HIS B 185 REMARK 465 HIS B 186 REMARK 465 HIS B 187 REMARK 465 HIS B 188 REMARK 465 HIS B 189 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 15 CB CG CD1 CD2 REMARK 470 LYS A 62 CG CD CE NZ REMARK 470 ARG A 65 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 66 CG1 CG2 CD1 REMARK 470 GLU A 68 CG CD OE1 OE2 REMARK 470 GLU A 69 OE1 OE2 REMARK 470 GLN A 72 CB CG CD OE1 NE2 REMARK 470 LYS A 73 CD CE NZ REMARK 470 LYS A 116 CG CD CE NZ REMARK 470 LYS A 145 CD CE NZ REMARK 470 ARG A 154 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 157 CG CD OE1 OE2 REMARK 470 GLU A 158 OE1 OE2 REMARK 470 LYS A 162 CD CE NZ REMARK 470 LEU A 179 CG CD1 CD2 REMARK 470 LYS B 27 CG CD CE NZ REMARK 470 LYS B 50 CG CD CE NZ REMARK 470 LYS B 56 CD CE NZ REMARK 470 GLU B 58 CG CD OE1 OE2 REMARK 470 LYS B 62 CG CD CE NZ REMARK 470 ARG B 65 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 66 CG1 CG2 CD1 REMARK 470 GLU B 68 CG CD OE1 OE2 REMARK 470 GLU B 69 OE1 OE2 REMARK 470 LYS B 73 CD CE NZ REMARK 470 LYS B 116 CG CD CE NZ REMARK 470 LYS B 121 CG CD CE NZ REMARK 470 LYS B 145 CD CE NZ REMARK 470 ARG B 154 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 157 CG CD OE1 OE2 REMARK 470 GLU B 158 CG CD OE1 OE2 REMARK 470 LYS B 162 CD CE NZ REMARK 470 LEU B 179 CG CD1 CD2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3MLI RELATED DB: PDB REMARK 900 2OUF-DS, A DISULFIDE-LINKED MUTANT OF HELICOBACTER PYLORI PROTEIN REMARK 900 HP0242. REMARK 900 RELATED ID: 2OUF RELATED DB: PDB REMARK 900 HELICOBACTER PYLORI PROTEIN HP0242, THE MONOMER USED TO DESIGN THE REMARK 900 KNOTTED PROTEIN 2OUF-2X. DBREF 3MLG A 1 92 UNP O25025 O25025_HELPY 1 92 DBREF 3MLG A 101 181 UNP O25025 O25025_HELPY 12 92 DBREF 3MLG B 1 92 UNP O25025 O25025_HELPY 1 92 DBREF 3MLG B 101 181 UNP O25025 O25025_HELPY 12 92 SEQADV 3MLG SER A 93 UNP O25025 LINKER SEQADV 3MLG GLY A 94 UNP O25025 LINKER SEQADV 3MLG SER A 95 UNP O25025 LINKER SEQADV 3MLG GLY A 96 UNP O25025 LINKER SEQADV 3MLG SER A 97 UNP O25025 LINKER SEQADV 3MLG GLY A 98 UNP O25025 LINKER SEQADV 3MLG SER A 99 UNP O25025 LINKER SEQADV 3MLG SER A 100 UNP O25025 LINKER SEQADV 3MLG LEU A 182 UNP O25025 EXPRESSION TAG SEQADV 3MLG GLU A 183 UNP O25025 EXPRESSION TAG SEQADV 3MLG HIS A 184 UNP O25025 EXPRESSION TAG SEQADV 3MLG HIS A 185 UNP O25025 EXPRESSION TAG SEQADV 3MLG HIS A 186 UNP O25025 EXPRESSION TAG SEQADV 3MLG HIS A 187 UNP O25025 EXPRESSION TAG SEQADV 3MLG HIS A 188 UNP O25025 EXPRESSION TAG SEQADV 3MLG HIS A 189 UNP O25025 EXPRESSION TAG SEQADV 3MLG SER B 93 UNP O25025 LINKER SEQADV 3MLG GLY B 94 UNP O25025 LINKER SEQADV 3MLG SER B 95 UNP O25025 LINKER SEQADV 3MLG GLY B 96 UNP O25025 LINKER SEQADV 3MLG SER B 97 UNP O25025 LINKER SEQADV 3MLG GLY B 98 UNP O25025 LINKER SEQADV 3MLG SER B 99 UNP O25025 LINKER SEQADV 3MLG SER B 100 UNP O25025 LINKER SEQADV 3MLG LEU B 182 UNP O25025 EXPRESSION TAG SEQADV 3MLG GLU B 183 UNP O25025 EXPRESSION TAG SEQADV 3MLG HIS B 184 UNP O25025 EXPRESSION TAG SEQADV 3MLG HIS B 185 UNP O25025 EXPRESSION TAG SEQADV 3MLG HIS B 186 UNP O25025 EXPRESSION TAG SEQADV 3MLG HIS B 187 UNP O25025 EXPRESSION TAG SEQADV 3MLG HIS B 188 UNP O25025 EXPRESSION TAG SEQADV 3MLG HIS B 189 UNP O25025 EXPRESSION TAG SEQRES 1 A 189 MET ARG ASP TYR SER GLU LEU GLU ILE PHE GLU GLY ASN SEQRES 2 A 189 PRO LEU ASP LYS TRP ASN ASP ILE ILE PHE HIS ALA SER SEQRES 3 A 189 LYS LYS LEU SER LYS LYS GLU LEU GLU ARG LEU LEU GLU SEQRES 4 A 189 LEU LEU ALA LEU LEU GLU THR PHE ILE GLU LYS GLU ASP SEQRES 5 A 189 LEU GLU GLU LYS PHE GLU SER PHE ALA LYS ALA LEU ARG SEQRES 6 A 189 ILE ASP GLU GLU LEU GLN GLN LYS ILE GLU SER ARG LYS SEQRES 7 A 189 THR ASP ILE VAL ILE GLN SER MET ALA ASN ILE LEU SER SEQRES 8 A 189 GLY SER GLY SER GLY SER GLY SER SER GLY ASN PRO LEU SEQRES 9 A 189 ASP LYS TRP ASN ASP ILE ILE PHE HIS ALA SER LYS LYS SEQRES 10 A 189 LEU SER LYS LYS GLU LEU GLU ARG LEU LEU GLU LEU LEU SEQRES 11 A 189 ALA LEU LEU GLU THR PHE ILE GLU LYS GLU ASP LEU GLU SEQRES 12 A 189 GLU LYS PHE GLU SER PHE ALA LYS ALA LEU ARG ILE ASP SEQRES 13 A 189 GLU GLU LEU GLN GLN LYS ILE GLU SER ARG LYS THR ASP SEQRES 14 A 189 ILE VAL ILE GLN SER MET ALA ASN ILE LEU SER GLY LEU SEQRES 15 A 189 GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 189 MET ARG ASP TYR SER GLU LEU GLU ILE PHE GLU GLY ASN SEQRES 2 B 189 PRO LEU ASP LYS TRP ASN ASP ILE ILE PHE HIS ALA SER SEQRES 3 B 189 LYS LYS LEU SER LYS LYS GLU LEU GLU ARG LEU LEU GLU SEQRES 4 B 189 LEU LEU ALA LEU LEU GLU THR PHE ILE GLU LYS GLU ASP SEQRES 5 B 189 LEU GLU GLU LYS PHE GLU SER PHE ALA LYS ALA LEU ARG SEQRES 6 B 189 ILE ASP GLU GLU LEU GLN GLN LYS ILE GLU SER ARG LYS SEQRES 7 B 189 THR ASP ILE VAL ILE GLN SER MET ALA ASN ILE LEU SER SEQRES 8 B 189 GLY SER GLY SER GLY SER GLY SER SER GLY ASN PRO LEU SEQRES 9 B 189 ASP LYS TRP ASN ASP ILE ILE PHE HIS ALA SER LYS LYS SEQRES 10 B 189 LEU SER LYS LYS GLU LEU GLU ARG LEU LEU GLU LEU LEU SEQRES 11 B 189 ALA LEU LEU GLU THR PHE ILE GLU LYS GLU ASP LEU GLU SEQRES 12 B 189 GLU LYS PHE GLU SER PHE ALA LYS ALA LEU ARG ILE ASP SEQRES 13 B 189 GLU GLU LEU GLN GLN LYS ILE GLU SER ARG LYS THR ASP SEQRES 14 B 189 ILE VAL ILE GLN SER MET ALA ASN ILE LEU SER GLY LEU SEQRES 15 B 189 GLU HIS HIS HIS HIS HIS HIS FORMUL 3 HOH *50(H2 O) HELIX 1 1 ASN A 13 ALA A 25 1 13 HELIX 2 2 SER A 26 GLU A 51 1 26 HELIX 3 3 LEU A 53 LYS A 62 1 10 HELIX 4 4 ALA A 63 ILE A 66 5 4 HELIX 5 5 ASP A 67 GLY A 92 1 26 HELIX 6 6 GLY A 101 ALA A 114 1 14 HELIX 7 7 SER A 115 GLU A 140 1 26 HELIX 8 8 LEU A 142 LYS A 151 1 10 HELIX 9 9 ASP A 156 GLY A 181 1 26 HELIX 10 10 ASN B 13 ALA B 25 1 13 HELIX 11 11 SER B 26 GLU B 51 1 26 HELIX 12 12 LEU B 53 LYS B 62 1 10 HELIX 13 13 ALA B 63 ILE B 66 5 4 HELIX 14 14 ASP B 67 GLY B 92 1 26 HELIX 15 15 GLY B 101 ALA B 114 1 14 HELIX 16 16 SER B 115 GLU B 140 1 26 HELIX 17 17 LEU B 142 ALA B 152 1 11 HELIX 18 18 ASP B 156 GLY B 181 1 26 CRYST1 44.942 75.390 118.573 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022251 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013264 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008434 0.00000