HEADER HYDROLASE 26-APR-10 3MPF OBSLTE 20-DEC-17 3MPF 5QBV TITLE CRYSTAL STRUCTURE OF HUMAN CATHEPSIN-S C25S MUTANT WITH BOUND DRUG COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATHEPSIN S; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: ACTIVE SITE (UNP RESIDUES 115 TO 331); COMPND 5 EC: 3.4.22.27; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 GENE: CTSS; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: BACULOVIRUS KEYWDS CATS, CATHEPSIN S, PYRAZOLE, DIAZINONES, P3, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.K.AMERIKS REVDAT 3 20-DEC-17 3MPF 1 OBSLTE REVDAT 2 28-JUL-10 3MPF 1 JRNL REVDAT 1 30-JUN-10 3MPF 0 JRNL AUTH M.K.AMERIKS,S.D.BEMBENEK,M.T.BURDETT,I.C.CHOONG,J.P.EDWARDS, JRNL AUTH 2 D.GEBAUER,Y.GU,L.KARLSSON,H.E.PURKEY,B.L.STAKER,S.SUN, JRNL AUTH 3 R.L.THURMOND,J.ZHU JRNL TITL DIAZINONES AS P2 REPLACEMENTS FOR PYRAZOLE-BASED CATHEPSIN S JRNL TITL 2 INHIBITORS JRNL REF BIOORG.MED.CHEM.LETT. V. 20 4060 2010 JRNL REFN ISSN 0960-894X JRNL PMID 20541404 JRNL DOI 10.1016/J.BMCL.2010.05.086 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.28 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 46804 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2369 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.84 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2987 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.15 REMARK 3 BIN R VALUE (WORKING SET) : 0.2140 REMARK 3 BIN FREE R VALUE SET COUNT : 157 REMARK 3 BIN FREE R VALUE : 0.2140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3367 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 90 REMARK 3 SOLVENT ATOMS : 472 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.59000 REMARK 3 B22 (A**2) : -0.03000 REMARK 3 B33 (A**2) : -0.33000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.82000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.069 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.162 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3557 ; 0.005 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3002 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4826 ; 1.023 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7011 ; 0.713 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 434 ; 4.903 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 160 ;36.514 ;24.375 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 544 ;11.430 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;12.246 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 481 ; 0.059 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4040 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 758 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 669 ; 0.182 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3054 ; 0.164 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1755 ; 0.180 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1852 ; 0.077 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 338 ; 0.174 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 20 ; 0.178 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 72 ; 0.190 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 22 ; 0.095 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2267 ; 0.406 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 906 ; 0.062 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3419 ; 0.643 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1684 ; 0.903 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1407 ; 1.330 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : B A REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 B 1 B 217 4 REMARK 3 1 A 1 A 217 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 B (A): 3134 ; 0.270 ; 0.500 REMARK 3 MEDIUM THERMAL 1 B (A**2): 3134 ; 0.220 ; 2.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 0.94 REMARK 3 ION PROBE RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3MPF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-APR-10. REMARK 100 THE DEPOSITION ID IS D_1000058834. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-SEP-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 4.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46805 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.17500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 1GLO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM SODIUM ACETATE PH 4.5, 200MM REMARK 280 AMMONIUM ACETATE, 25% PEG 8000. PROTEIN CONCENTRATION 7 MG/ML, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K, PH 4.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 86.19550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 17.15550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 86.19550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 17.15550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 465 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU B 218 REMARK 465 ALA B 219 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 60 CD CE NZ REMARK 470 LYS A 82 CE NZ REMARK 470 LYS A 98 CG CD CE NZ REMARK 470 LYS B 60 CD CE NZ REMARK 470 LYS B 98 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 58 -126.99 -115.00 REMARK 500 THR B 58 -128.74 -113.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE N2D A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE N2D B 901 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3MPE RELATED DB: PDB DBREF 3MPF A 1 217 UNP P25774 CATS_HUMAN 115 331 DBREF 3MPF B 1 217 UNP P25774 CATS_HUMAN 115 331 SEQADV 3MPF SER A 25 UNP P25774 CYS 139 ENGINEERED SEQADV 3MPF LEU A 218 UNP P25774 EXPRESSION TAG SEQADV 3MPF ALA A 219 UNP P25774 EXPRESSION TAG SEQADV 3MPF SER B 25 UNP P25774 CYS 139 ENGINEERED SEQADV 3MPF LEU B 218 UNP P25774 EXPRESSION TAG SEQADV 3MPF ALA B 219 UNP P25774 EXPRESSION TAG SEQRES 1 A 219 LEU PRO ASP SER VAL ASP TRP ARG GLU LYS GLY CYS VAL SEQRES 2 A 219 THR GLU VAL LYS TYR GLN GLY SER CYS GLY ALA SER TRP SEQRES 3 A 219 ALA PHE SER ALA VAL GLY ALA LEU GLU ALA GLN LEU LYS SEQRES 4 A 219 LEU LYS THR GLY LYS LEU VAL SER LEU SER ALA GLN ASN SEQRES 5 A 219 LEU VAL ASP CYS SER THR GLU LYS TYR GLY ASN LYS GLY SEQRES 6 A 219 CYS ASN GLY GLY PHE MET THR THR ALA PHE GLN TYR ILE SEQRES 7 A 219 ILE ASP ASN LYS GLY ILE ASP SER ASP ALA SER TYR PRO SEQRES 8 A 219 TYR LYS ALA MET ASP GLN LYS CYS GLN TYR ASP SER LYS SEQRES 9 A 219 TYR ARG ALA ALA THR CYS SER LYS TYR THR GLU LEU PRO SEQRES 10 A 219 TYR GLY ARG GLU ASP VAL LEU LYS GLU ALA VAL ALA ASN SEQRES 11 A 219 LYS GLY PRO VAL SER VAL GLY VAL ASP ALA ARG HIS PRO SEQRES 12 A 219 SER PHE PHE LEU TYR ARG SER GLY VAL TYR TYR GLU PRO SEQRES 13 A 219 SER CYS THR GLN ASN VAL ASN HIS GLY VAL LEU VAL VAL SEQRES 14 A 219 GLY TYR GLY ASP LEU ASN GLY LYS GLU TYR TRP LEU VAL SEQRES 15 A 219 LYS ASN SER TRP GLY HIS ASN PHE GLY GLU GLU GLY TYR SEQRES 16 A 219 ILE ARG MET ALA ARG ASN LYS GLY ASN HIS CYS GLY ILE SEQRES 17 A 219 ALA SER PHE PRO SER TYR PRO GLU ILE LEU ALA SEQRES 1 B 219 LEU PRO ASP SER VAL ASP TRP ARG GLU LYS GLY CYS VAL SEQRES 2 B 219 THR GLU VAL LYS TYR GLN GLY SER CYS GLY ALA SER TRP SEQRES 3 B 219 ALA PHE SER ALA VAL GLY ALA LEU GLU ALA GLN LEU LYS SEQRES 4 B 219 LEU LYS THR GLY LYS LEU VAL SER LEU SER ALA GLN ASN SEQRES 5 B 219 LEU VAL ASP CYS SER THR GLU LYS TYR GLY ASN LYS GLY SEQRES 6 B 219 CYS ASN GLY GLY PHE MET THR THR ALA PHE GLN TYR ILE SEQRES 7 B 219 ILE ASP ASN LYS GLY ILE ASP SER ASP ALA SER TYR PRO SEQRES 8 B 219 TYR LYS ALA MET ASP GLN LYS CYS GLN TYR ASP SER LYS SEQRES 9 B 219 TYR ARG ALA ALA THR CYS SER LYS TYR THR GLU LEU PRO SEQRES 10 B 219 TYR GLY ARG GLU ASP VAL LEU LYS GLU ALA VAL ALA ASN SEQRES 11 B 219 LYS GLY PRO VAL SER VAL GLY VAL ASP ALA ARG HIS PRO SEQRES 12 B 219 SER PHE PHE LEU TYR ARG SER GLY VAL TYR TYR GLU PRO SEQRES 13 B 219 SER CYS THR GLN ASN VAL ASN HIS GLY VAL LEU VAL VAL SEQRES 14 B 219 GLY TYR GLY ASP LEU ASN GLY LYS GLU TYR TRP LEU VAL SEQRES 15 B 219 LYS ASN SER TRP GLY HIS ASN PHE GLY GLU GLU GLY TYR SEQRES 16 B 219 ILE ARG MET ALA ARG ASN LYS GLY ASN HIS CYS GLY ILE SEQRES 17 B 219 ALA SER PHE PRO SER TYR PRO GLU ILE LEU ALA HET N2D A 901 45 HET N2D B 901 45 HETNAM N2D N-[2-CHLORO-5-(1-{3-[4-(6-CHLORO-3-METHYL-2-OXO-2,3- HETNAM 2 N2D DIHYDRO-1H-BENZIMIDAZOL-1-YL)PIPERIDIN-1-YL]PROPYL}-6- HETNAM 3 N2D OXO-1,6-DIHYDROPYRIDAZIN-3-YL)BENZYL]BENZAMIDE FORMUL 3 N2D 2(C34 H34 CL2 N6 O3) FORMUL 5 HOH *472(H2 O) HELIX 1 1 ARG A 8 GLY A 11 5 4 HELIX 2 2 ALA A 24 GLY A 43 1 20 HELIX 3 3 SER A 49 SER A 57 1 9 HELIX 4 4 THR A 58 GLY A 62 5 5 HELIX 5 5 LYS A 64 GLY A 68 5 5 HELIX 6 6 PHE A 70 LYS A 82 1 13 HELIX 7 7 ASP A 102 LYS A 104 5 3 HELIX 8 8 ARG A 120 LYS A 131 1 12 HELIX 9 9 HIS A 142 LEU A 147 1 6 HELIX 10 10 ASN A 204 ILE A 208 5 5 HELIX 11 11 ARG B 8 GLY B 11 5 4 HELIX 12 12 ALA B 24 GLY B 43 1 20 HELIX 13 13 SER B 49 SER B 57 1 9 HELIX 14 14 THR B 58 GLY B 62 5 5 HELIX 15 15 LYS B 64 GLY B 68 5 5 HELIX 16 16 PHE B 70 LYS B 82 1 13 HELIX 17 17 ASP B 102 LYS B 104 5 3 HELIX 18 18 ARG B 120 LYS B 131 1 12 HELIX 19 19 HIS B 142 LEU B 147 1 6 HELIX 20 20 ASN B 204 ILE B 208 5 5 SHEET 1 A 3 VAL A 5 ASP A 6 0 SHEET 2 A 3 HIS A 164 LEU A 174 -1 O TYR A 171 N VAL A 5 SHEET 3 A 3 VAL A 134 VAL A 138 -1 N VAL A 136 O VAL A 166 SHEET 1 B 5 VAL A 5 ASP A 6 0 SHEET 2 B 5 HIS A 164 LEU A 174 -1 O TYR A 171 N VAL A 5 SHEET 3 B 5 LYS A 177 LYS A 183 -1 O LYS A 183 N LEU A 167 SHEET 4 B 5 TYR A 195 ALA A 199 -1 O MET A 198 N TRP A 180 SHEET 5 B 5 VAL A 152 TYR A 153 1 N TYR A 153 O ARG A 197 SHEET 1 C 2 ILE A 84 ASP A 85 0 SHEET 2 C 2 ARG A 106 ALA A 108 -1 O ALA A 107 N ILE A 84 SHEET 1 D 2 LYS A 112 GLU A 115 0 SHEET 2 D 2 SER A 213 GLU A 216 -1 O TYR A 214 N THR A 114 SHEET 1 E 3 VAL B 5 ASP B 6 0 SHEET 2 E 3 HIS B 164 LEU B 174 -1 O TYR B 171 N VAL B 5 SHEET 3 E 3 VAL B 134 VAL B 138 -1 N VAL B 136 O VAL B 166 SHEET 1 F 5 VAL B 5 ASP B 6 0 SHEET 2 F 5 HIS B 164 LEU B 174 -1 O TYR B 171 N VAL B 5 SHEET 3 F 5 LYS B 177 LYS B 183 -1 O LYS B 183 N LEU B 167 SHEET 4 F 5 TYR B 195 ALA B 199 -1 O MET B 198 N TRP B 180 SHEET 5 F 5 VAL B 152 TYR B 153 1 N TYR B 153 O ARG B 197 SHEET 1 G 2 ILE B 84 ASP B 85 0 SHEET 2 G 2 ARG B 106 ALA B 108 -1 O ALA B 107 N ILE B 84 SHEET 1 H 2 LYS B 112 GLU B 115 0 SHEET 2 H 2 SER B 213 GLU B 216 -1 O TYR B 214 N THR B 114 SSBOND 1 CYS A 22 CYS A 66 1555 1555 2.04 SSBOND 2 CYS A 56 CYS A 99 1555 1555 2.05 SSBOND 3 CYS A 158 CYS A 206 1555 1555 2.03 SSBOND 4 CYS B 22 CYS B 66 1555 1555 2.04 SSBOND 5 CYS B 56 CYS B 99 1555 1555 2.05 SSBOND 6 CYS B 158 CYS B 206 1555 1555 2.03 SITE 1 AC1 17 ASP A 6 ARG A 8 GLU A 9 LYS A 60 SITE 2 AC1 17 GLY A 62 ASN A 67 GLY A 68 GLY A 69 SITE 3 AC1 17 PHE A 70 MET A 71 THR A 73 VAL A 162 SITE 4 AC1 17 GLY A 165 GLU A 193 PHE A 211 HOH A 367 SITE 5 AC1 17 HOH A 423 SITE 1 AC2 15 ASP B 6 ARG B 8 GLU B 9 LYS B 60 SITE 2 AC2 15 GLY B 62 ASN B 67 GLY B 68 GLY B 69 SITE 3 AC2 15 PHE B 70 MET B 71 THR B 73 GLY B 165 SITE 4 AC2 15 GLU B 193 PHE B 211 HOH B 299 CRYST1 172.391 34.311 104.021 90.00 125.27 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005801 0.000000 0.004103 0.00000 SCALE2 0.000000 0.029145 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011775 0.00000