HEADER HYDROLASE 28-APR-10 3MR1 TITLE CRYSTAL STRUCTURE OF METHIONINE AMINOPEPTIDASE FROM RICKETTSIA TITLE 2 PROWAZEKII COMPND MOL_ID: 1; COMPND 2 MOLECULE: METHIONINE AMINOPEPTIDASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 3-249; COMPND 5 SYNONYM: MAP, PEPTIDASE M; COMPND 6 EC: 3.4.11.18; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RICKETTSIA PROWAZEKII; SOURCE 3 ORGANISM_TAXID: 782; SOURCE 4 GENE: MAP, Q9ZCD3, RP824; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: AVA0421 KEYWDS NIAID, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, KEYWDS 2 SSGCID, PROTEASE, AMINOPEPTIDASE, METALLOENZYME, EPIDEMIC TYPHUS, KEYWDS 3 LICE-BORN PATHOGEN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 4 06-SEP-23 3MR1 1 REMARK SEQADV LINK REVDAT 3 15-FEB-17 3MR1 1 JRNL REVDAT 2 08-FEB-17 3MR1 1 JRNL VERSN REVDAT 1 26-MAY-10 3MR1 0 JRNL AUTH T.R.HELGREN,C.CHEN,P.WANGTRAKULDEE,T.E.EDWARDS,B.L.STAKER, JRNL AUTH 2 J.ABENDROTH,B.SANKARAN,N.A.HOUSLEY,P.J.MYLER,J.P.AUDIA, JRNL AUTH 3 J.R.HORN,T.J.HAGEN JRNL TITL RICKETTSIA PROWAZEKII METHIONINE AMINOPEPTIDASE AS A JRNL TITL 2 PROMISING TARGET FOR THE DEVELOPMENT OF ANTIBACTERIAL JRNL TITL 3 AGENTS. JRNL REF BIOORG.MED.CHEM. V. 25 813 2017 JRNL REFN ISSN 0968-0896 JRNL PMID 28089350 JRNL DOI 10.1016/J.BMC.2016.11.013 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 69661 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3700 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4412 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.89 REMARK 3 BIN R VALUE (WORKING SET) : 0.1950 REMARK 3 BIN FREE R VALUE SET COUNT : 211 REMARK 3 BIN FREE R VALUE : 0.2470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7691 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 1073 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.04000 REMARK 3 B22 (A**2) : -1.12000 REMARK 3 B33 (A**2) : 1.15000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.13000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.178 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.155 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.099 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.768 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7966 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10845 ; 1.410 ; 1.949 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1017 ; 6.233 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 338 ;31.865 ;24.379 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1319 ;13.119 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 29 ;23.233 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1236 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5997 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4966 ; 0.631 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8069 ; 1.108 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3000 ; 2.034 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2763 ; 3.247 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -10 A 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 5.4644 12.4094 10.9586 REMARK 3 T TENSOR REMARK 3 T11: 0.0127 T22: 0.0197 REMARK 3 T33: 0.0322 T12: -0.0017 REMARK 3 T13: 0.0044 T23: 0.0097 REMARK 3 L TENSOR REMARK 3 L11: 0.7273 L22: 1.0539 REMARK 3 L33: 0.7816 L12: -0.1753 REMARK 3 L13: 0.1739 L23: 0.1022 REMARK 3 S TENSOR REMARK 3 S11: -0.0420 S12: -0.0543 S13: 0.0158 REMARK 3 S21: 0.0528 S22: 0.0256 S23: -0.0235 REMARK 3 S31: -0.0334 S32: -0.0186 S33: 0.0164 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -10 B 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 15.7995 -25.6073 10.8440 REMARK 3 T TENSOR REMARK 3 T11: 0.0291 T22: 0.0134 REMARK 3 T33: 0.0461 T12: 0.0069 REMARK 3 T13: 0.0021 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 0.9354 L22: 1.1685 REMARK 3 L33: 0.9998 L12: -0.3750 REMARK 3 L13: -0.3000 L23: 0.0873 REMARK 3 S TENSOR REMARK 3 S11: -0.1033 S12: -0.0520 S13: -0.0091 REMARK 3 S21: 0.1376 S22: 0.0639 S23: -0.0333 REMARK 3 S31: 0.0865 S32: 0.0419 S33: 0.0394 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C -10 C 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 23.2602 -19.0615 69.3079 REMARK 3 T TENSOR REMARK 3 T11: 0.0074 T22: 0.0244 REMARK 3 T33: 0.0297 T12: -0.0026 REMARK 3 T13: 0.0012 T23: 0.0103 REMARK 3 L TENSOR REMARK 3 L11: 0.6580 L22: 0.8512 REMARK 3 L33: 0.7541 L12: -0.2204 REMARK 3 L13: 0.1498 L23: -0.0031 REMARK 3 S TENSOR REMARK 3 S11: -0.0186 S12: -0.0384 S13: 0.0442 REMARK 3 S21: 0.0413 S22: 0.0262 S23: -0.0313 REMARK 3 S31: -0.0242 S32: -0.0645 S33: -0.0077 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D -10 D 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 2.8434 -0.0866 47.5026 REMARK 3 T TENSOR REMARK 3 T11: 0.0375 T22: 0.0208 REMARK 3 T33: 0.0075 T12: -0.0046 REMARK 3 T13: -0.0056 T23: 0.0083 REMARK 3 L TENSOR REMARK 3 L11: 0.7294 L22: 0.8705 REMARK 3 L33: 1.1158 L12: 0.2583 REMARK 3 L13: -0.3306 L23: -0.1775 REMARK 3 S TENSOR REMARK 3 S11: -0.0741 S12: 0.0508 S13: 0.0116 REMARK 3 S21: -0.1015 S22: 0.0870 S23: 0.0424 REMARK 3 S31: 0.1473 S32: -0.0441 S33: -0.0129 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 3MR1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-MAY-10. REMARK 100 THE DEPOSITION ID IS D_1000058892. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-APR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73427 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 42.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 4.910 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.3200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.63 REMARK 200 R MERGE FOR SHELL (I) : 0.26000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1XNZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SPG BUFFER PH 8.0, 25% PEG 1500 REMARK 280 WITH 20% ETHYLENE GLYCOL AS CRYOPROTECTANT, 29 MG/ML PROTEIN, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 57.42500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 GLY B -3 REMARK 465 PRO B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 GLY C -3 REMARK 465 PRO C -2 REMARK 465 GLY C -1 REMARK 465 GLY D -3 REMARK 465 PRO D -2 REMARK 465 GLY D -1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 8 CG CD CE NZ REMARK 470 ARG A 121 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 177 CG CD CE NZ REMARK 470 ARG A 185 CG CD NE CZ NH1 NH2 REMARK 470 MET B 1 CG SD CE REMARK 470 LYS B 3 CG CD CE NZ REMARK 470 ARG B 121 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 177 CG CD CE NZ REMARK 470 ARG B 185 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 240 CG CD CE NZ REMARK 470 LYS C 8 CG CD CE NZ REMARK 470 ARG C 185 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 193 CG CD CE NZ REMARK 470 LYS C 240 CG CD CE NZ REMARK 470 SER D 0 OG REMARK 470 MET D 1 CG SD CE REMARK 470 LYS D 8 CG CD CE NZ REMARK 470 LYS D 177 CG CD CE NZ REMARK 470 ARG D 185 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 193 CG CD CE NZ REMARK 470 LYS D 240 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 108 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 ARG A 224 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 72 -109.06 56.27 REMARK 500 ASN A 158 24.93 80.60 REMARK 500 THR A 247 47.55 -94.40 REMARK 500 ASN B 72 -112.38 57.58 REMARK 500 TRP B 219 -45.36 -130.14 REMARK 500 THR B 247 49.25 -92.56 REMARK 500 ASN C 72 -108.98 52.41 REMARK 500 ASN D 72 -113.26 57.57 REMARK 500 GLU D 201 58.39 -141.89 REMARK 500 TRP D 219 -45.24 -132.20 REMARK 500 THR D 247 53.78 -92.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 251 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 72 O REMARK 620 2 VAL A 74 O 99.4 REMARK 620 3 SER A 229 O 89.4 128.0 REMARK 620 4 HOH A 306 O 165.6 90.5 76.3 REMARK 620 5 HOH A 726 O 123.4 115.2 101.1 59.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 250 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 94 OD1 REMARK 620 2 ASP A 94 OD2 55.1 REMARK 620 3 ASP A 105 OD1 104.9 160.0 REMARK 620 4 GLU A 233 OE1 92.9 98.6 82.4 REMARK 620 5 PO4 A 252 O1 152.1 97.0 103.0 91.1 REMARK 620 6 HOH A 728 O 91.1 90.1 89.1 171.2 89.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 249 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 105 OD2 REMARK 620 2 HIS A 168 NE2 91.2 REMARK 620 3 GLU A 201 OE1 154.9 85.4 REMARK 620 4 GLU A 233 OE2 82.2 124.8 79.4 REMARK 620 5 PO4 A 252 O1 92.8 136.4 106.8 98.8 REMARK 620 6 PO4 A 252 O4 106.6 77.3 96.9 156.7 60.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 251 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 72 O REMARK 620 2 VAL B 74 O 99.6 REMARK 620 3 SER B 229 O 86.3 131.6 REMARK 620 4 HOH B 309 O 120.9 123.4 91.5 REMARK 620 5 HOH B 450 O 161.7 94.8 75.7 57.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 250 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 94 OD1 REMARK 620 2 ASP B 94 OD2 54.1 REMARK 620 3 ASP B 105 OD1 103.2 157.1 REMARK 620 4 GLU B 233 OE1 94.6 98.8 85.0 REMARK 620 5 PO4 B 252 O2 149.8 95.7 107.0 88.9 REMARK 620 6 HOH B 786 O 89.1 86.9 89.9 174.2 90.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 249 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 105 OD2 REMARK 620 2 HIS B 168 NE2 90.6 REMARK 620 3 GLU B 201 OE1 153.8 88.1 REMARK 620 4 GLU B 233 OE2 81.3 123.0 77.6 REMARK 620 5 PO4 B 252 O2 92.8 138.9 105.2 98.0 REMARK 620 6 PO4 B 252 O3 109.4 79.5 96.1 155.8 60.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 251 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN C 72 O REMARK 620 2 VAL C 74 O 99.9 REMARK 620 3 SER C 229 O 88.2 127.4 REMARK 620 4 HOH C 266 O 164.2 91.9 76.1 REMARK 620 5 HOH C 277 O 116.1 124.9 95.4 63.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C 250 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 94 OD1 REMARK 620 2 ASP C 94 OD2 52.1 REMARK 620 3 ASP C 105 OD1 111.7 163.0 REMARK 620 4 GLU C 233 OE1 95.7 97.8 88.5 REMARK 620 5 PO4 C 252 O1 143.4 91.3 104.7 88.6 REMARK 620 6 HOH C 712 O 88.4 87.0 87.4 175.0 89.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C 249 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 105 OD2 REMARK 620 2 HIS C 168 NE2 90.6 REMARK 620 3 GLU C 201 OE1 157.2 84.7 REMARK 620 4 GLU C 233 OE2 85.0 126.2 79.9 REMARK 620 5 PO4 C 252 O1 94.6 138.0 103.8 95.8 REMARK 620 6 PO4 C 252 O4 100.8 76.4 99.8 157.0 61.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA D 251 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN D 72 O REMARK 620 2 VAL D 74 O 95.9 REMARK 620 3 SER D 229 O 90.5 130.5 REMARK 620 4 HOH D 280 O 124.2 118.1 97.3 REMARK 620 5 HOH D 318 O 167.8 93.5 77.5 56.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN D 250 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 94 OD1 REMARK 620 2 ASP D 94 OD2 55.8 REMARK 620 3 ASP D 105 OD1 102.9 158.8 REMARK 620 4 GLU D 233 OE1 98.1 97.9 83.9 REMARK 620 5 PO4 D 252 O3 153.1 97.3 103.9 86.2 REMARK 620 6 HOH D 929 O 87.6 90.3 88.9 171.7 91.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN D 249 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 105 OD2 REMARK 620 2 HIS D 168 NE2 90.3 REMARK 620 3 GLU D 201 OE1 155.4 87.6 REMARK 620 4 GLU D 233 OE2 81.9 125.1 79.3 REMARK 620 5 PO4 D 252 O3 95.4 137.1 102.8 97.8 REMARK 620 6 PO4 D 252 O2 112.6 79.7 91.2 152.4 58.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 249 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 250 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 251 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 252 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 249 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 250 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 251 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 252 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN C 249 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN C 250 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA C 251 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 C 252 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN D 249 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN D 250 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA D 251 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 D 252 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL D 253 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL D 254 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: RIPRA.00039.A RELATED DB: TARGETDB REMARK 900 RELATED ID: 3MX6 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF METHIONINE AMINOPEPTIDASE FROM RICKETTSIA REMARK 900 PROWAZEKII BOUND TO METHIONINE DBREF 3MR1 A 2 248 UNP Q9ZCD3 AMPM_RICPR 3 249 DBREF 3MR1 B 2 248 UNP Q9ZCD3 AMPM_RICPR 3 249 DBREF 3MR1 C 2 248 UNP Q9ZCD3 AMPM_RICPR 3 249 DBREF 3MR1 D 2 248 UNP Q9ZCD3 AMPM_RICPR 3 249 SEQADV 3MR1 GLY A -3 UNP Q9ZCD3 EXPRESSION TAG SEQADV 3MR1 PRO A -2 UNP Q9ZCD3 EXPRESSION TAG SEQADV 3MR1 GLY A -1 UNP Q9ZCD3 EXPRESSION TAG SEQADV 3MR1 SER A 0 UNP Q9ZCD3 EXPRESSION TAG SEQADV 3MR1 MET A 1 UNP Q9ZCD3 EXPRESSION TAG SEQADV 3MR1 GLY B -3 UNP Q9ZCD3 EXPRESSION TAG SEQADV 3MR1 PRO B -2 UNP Q9ZCD3 EXPRESSION TAG SEQADV 3MR1 GLY B -1 UNP Q9ZCD3 EXPRESSION TAG SEQADV 3MR1 SER B 0 UNP Q9ZCD3 EXPRESSION TAG SEQADV 3MR1 MET B 1 UNP Q9ZCD3 EXPRESSION TAG SEQADV 3MR1 GLY C -3 UNP Q9ZCD3 EXPRESSION TAG SEQADV 3MR1 PRO C -2 UNP Q9ZCD3 EXPRESSION TAG SEQADV 3MR1 GLY C -1 UNP Q9ZCD3 EXPRESSION TAG SEQADV 3MR1 SER C 0 UNP Q9ZCD3 EXPRESSION TAG SEQADV 3MR1 MET C 1 UNP Q9ZCD3 EXPRESSION TAG SEQADV 3MR1 GLY D -3 UNP Q9ZCD3 EXPRESSION TAG SEQADV 3MR1 PRO D -2 UNP Q9ZCD3 EXPRESSION TAG SEQADV 3MR1 GLY D -1 UNP Q9ZCD3 EXPRESSION TAG SEQADV 3MR1 SER D 0 UNP Q9ZCD3 EXPRESSION TAG SEQADV 3MR1 MET D 1 UNP Q9ZCD3 EXPRESSION TAG SEQRES 1 A 252 GLY PRO GLY SER MET ILE LYS ILE HIS THR GLU LYS ASP SEQRES 2 A 252 PHE ILE LYS MET ARG ALA ALA GLY LYS LEU ALA ALA GLU SEQRES 3 A 252 THR LEU ASP PHE ILE THR ASP HIS VAL LYS PRO ASN VAL SEQRES 4 A 252 THR THR ASN SER LEU ASN ASP LEU CYS HIS ASN PHE ILE SEQRES 5 A 252 THR SER HIS ASN ALA ILE PRO ALA PRO LEU ASN TYR LYS SEQRES 6 A 252 GLY PHE PRO LYS SER ILE CYS THR SER ILE ASN HIS VAL SEQRES 7 A 252 VAL CYS HIS GLY ILE PRO ASN ASP LYS PRO LEU LYS ASN SEQRES 8 A 252 GLY ASP ILE VAL ASN ILE ASP VAL THR VAL ILE LEU ASP SEQRES 9 A 252 GLY TRP TYR GLY ASP THR SER ARG MET TYR TYR VAL GLY SEQRES 10 A 252 ASP VAL ALA ILE LYS PRO LYS ARG LEU ILE GLN VAL THR SEQRES 11 A 252 TYR ASP ALA MET MET LYS GLY ILE GLU VAL VAL ARG PRO SEQRES 12 A 252 GLY ALA LYS LEU GLY ASP ILE GLY TYR ALA ILE GLN SER SEQRES 13 A 252 TYR ALA GLU LYS HIS ASN TYR SER VAL VAL ARG ASP TYR SEQRES 14 A 252 THR GLY HIS GLY ILE GLY ARG VAL PHE HIS ASP LYS PRO SEQRES 15 A 252 SER ILE LEU ASN TYR GLY ARG ASN GLY THR GLY LEU THR SEQRES 16 A 252 LEU LYS GLU GLY MET PHE PHE THR VAL GLU PRO MET ILE SEQRES 17 A 252 ASN ALA GLY ASN TYR ASP THR ILE LEU SER LYS LEU ASP SEQRES 18 A 252 GLY TRP THR VAL THR THR ARG ASP LYS SER LEU SER ALA SEQRES 19 A 252 GLN PHE GLU HIS THR ILE GLY VAL THR LYS ASP GLY PHE SEQRES 20 A 252 GLU ILE PHE THR LEU SEQRES 1 B 252 GLY PRO GLY SER MET ILE LYS ILE HIS THR GLU LYS ASP SEQRES 2 B 252 PHE ILE LYS MET ARG ALA ALA GLY LYS LEU ALA ALA GLU SEQRES 3 B 252 THR LEU ASP PHE ILE THR ASP HIS VAL LYS PRO ASN VAL SEQRES 4 B 252 THR THR ASN SER LEU ASN ASP LEU CYS HIS ASN PHE ILE SEQRES 5 B 252 THR SER HIS ASN ALA ILE PRO ALA PRO LEU ASN TYR LYS SEQRES 6 B 252 GLY PHE PRO LYS SER ILE CYS THR SER ILE ASN HIS VAL SEQRES 7 B 252 VAL CYS HIS GLY ILE PRO ASN ASP LYS PRO LEU LYS ASN SEQRES 8 B 252 GLY ASP ILE VAL ASN ILE ASP VAL THR VAL ILE LEU ASP SEQRES 9 B 252 GLY TRP TYR GLY ASP THR SER ARG MET TYR TYR VAL GLY SEQRES 10 B 252 ASP VAL ALA ILE LYS PRO LYS ARG LEU ILE GLN VAL THR SEQRES 11 B 252 TYR ASP ALA MET MET LYS GLY ILE GLU VAL VAL ARG PRO SEQRES 12 B 252 GLY ALA LYS LEU GLY ASP ILE GLY TYR ALA ILE GLN SER SEQRES 13 B 252 TYR ALA GLU LYS HIS ASN TYR SER VAL VAL ARG ASP TYR SEQRES 14 B 252 THR GLY HIS GLY ILE GLY ARG VAL PHE HIS ASP LYS PRO SEQRES 15 B 252 SER ILE LEU ASN TYR GLY ARG ASN GLY THR GLY LEU THR SEQRES 16 B 252 LEU LYS GLU GLY MET PHE PHE THR VAL GLU PRO MET ILE SEQRES 17 B 252 ASN ALA GLY ASN TYR ASP THR ILE LEU SER LYS LEU ASP SEQRES 18 B 252 GLY TRP THR VAL THR THR ARG ASP LYS SER LEU SER ALA SEQRES 19 B 252 GLN PHE GLU HIS THR ILE GLY VAL THR LYS ASP GLY PHE SEQRES 20 B 252 GLU ILE PHE THR LEU SEQRES 1 C 252 GLY PRO GLY SER MET ILE LYS ILE HIS THR GLU LYS ASP SEQRES 2 C 252 PHE ILE LYS MET ARG ALA ALA GLY LYS LEU ALA ALA GLU SEQRES 3 C 252 THR LEU ASP PHE ILE THR ASP HIS VAL LYS PRO ASN VAL SEQRES 4 C 252 THR THR ASN SER LEU ASN ASP LEU CYS HIS ASN PHE ILE SEQRES 5 C 252 THR SER HIS ASN ALA ILE PRO ALA PRO LEU ASN TYR LYS SEQRES 6 C 252 GLY PHE PRO LYS SER ILE CYS THR SER ILE ASN HIS VAL SEQRES 7 C 252 VAL CYS HIS GLY ILE PRO ASN ASP LYS PRO LEU LYS ASN SEQRES 8 C 252 GLY ASP ILE VAL ASN ILE ASP VAL THR VAL ILE LEU ASP SEQRES 9 C 252 GLY TRP TYR GLY ASP THR SER ARG MET TYR TYR VAL GLY SEQRES 10 C 252 ASP VAL ALA ILE LYS PRO LYS ARG LEU ILE GLN VAL THR SEQRES 11 C 252 TYR ASP ALA MET MET LYS GLY ILE GLU VAL VAL ARG PRO SEQRES 12 C 252 GLY ALA LYS LEU GLY ASP ILE GLY TYR ALA ILE GLN SER SEQRES 13 C 252 TYR ALA GLU LYS HIS ASN TYR SER VAL VAL ARG ASP TYR SEQRES 14 C 252 THR GLY HIS GLY ILE GLY ARG VAL PHE HIS ASP LYS PRO SEQRES 15 C 252 SER ILE LEU ASN TYR GLY ARG ASN GLY THR GLY LEU THR SEQRES 16 C 252 LEU LYS GLU GLY MET PHE PHE THR VAL GLU PRO MET ILE SEQRES 17 C 252 ASN ALA GLY ASN TYR ASP THR ILE LEU SER LYS LEU ASP SEQRES 18 C 252 GLY TRP THR VAL THR THR ARG ASP LYS SER LEU SER ALA SEQRES 19 C 252 GLN PHE GLU HIS THR ILE GLY VAL THR LYS ASP GLY PHE SEQRES 20 C 252 GLU ILE PHE THR LEU SEQRES 1 D 252 GLY PRO GLY SER MET ILE LYS ILE HIS THR GLU LYS ASP SEQRES 2 D 252 PHE ILE LYS MET ARG ALA ALA GLY LYS LEU ALA ALA GLU SEQRES 3 D 252 THR LEU ASP PHE ILE THR ASP HIS VAL LYS PRO ASN VAL SEQRES 4 D 252 THR THR ASN SER LEU ASN ASP LEU CYS HIS ASN PHE ILE SEQRES 5 D 252 THR SER HIS ASN ALA ILE PRO ALA PRO LEU ASN TYR LYS SEQRES 6 D 252 GLY PHE PRO LYS SER ILE CYS THR SER ILE ASN HIS VAL SEQRES 7 D 252 VAL CYS HIS GLY ILE PRO ASN ASP LYS PRO LEU LYS ASN SEQRES 8 D 252 GLY ASP ILE VAL ASN ILE ASP VAL THR VAL ILE LEU ASP SEQRES 9 D 252 GLY TRP TYR GLY ASP THR SER ARG MET TYR TYR VAL GLY SEQRES 10 D 252 ASP VAL ALA ILE LYS PRO LYS ARG LEU ILE GLN VAL THR SEQRES 11 D 252 TYR ASP ALA MET MET LYS GLY ILE GLU VAL VAL ARG PRO SEQRES 12 D 252 GLY ALA LYS LEU GLY ASP ILE GLY TYR ALA ILE GLN SER SEQRES 13 D 252 TYR ALA GLU LYS HIS ASN TYR SER VAL VAL ARG ASP TYR SEQRES 14 D 252 THR GLY HIS GLY ILE GLY ARG VAL PHE HIS ASP LYS PRO SEQRES 15 D 252 SER ILE LEU ASN TYR GLY ARG ASN GLY THR GLY LEU THR SEQRES 16 D 252 LEU LYS GLU GLY MET PHE PHE THR VAL GLU PRO MET ILE SEQRES 17 D 252 ASN ALA GLY ASN TYR ASP THR ILE LEU SER LYS LEU ASP SEQRES 18 D 252 GLY TRP THR VAL THR THR ARG ASP LYS SER LEU SER ALA SEQRES 19 D 252 GLN PHE GLU HIS THR ILE GLY VAL THR LYS ASP GLY PHE SEQRES 20 D 252 GLU ILE PHE THR LEU HET MN A 249 1 HET MN A 250 1 HET NA A 251 1 HET PO4 A 252 5 HET MN B 249 1 HET MN B 250 1 HET NA B 251 1 HET PO4 B 252 5 HET MN C 249 1 HET MN C 250 1 HET NA C 251 1 HET PO4 C 252 5 HET MN D 249 1 HET MN D 250 1 HET NA D 251 1 HET PO4 D 252 5 HET CL D 253 1 HET CL D 254 1 HETNAM MN MANGANESE (II) ION HETNAM NA SODIUM ION HETNAM PO4 PHOSPHATE ION HETNAM CL CHLORIDE ION FORMUL 5 MN 8(MN 2+) FORMUL 7 NA 4(NA 1+) FORMUL 8 PO4 4(O4 P 3-) FORMUL 21 CL 2(CL 1-) FORMUL 23 HOH *1073(H2 O) HELIX 1 1 THR A 6 THR A 28 1 23 HELIX 2 2 ASP A 29 VAL A 31 5 3 HELIX 3 3 THR A 36 SER A 50 1 15 HELIX 4 4 ASN A 59 PHE A 63 5 5 HELIX 5 5 ALA A 116 VAL A 136 1 21 HELIX 6 6 LYS A 142 HIS A 157 1 16 HELIX 7 7 THR B 6 THR B 28 1 23 HELIX 8 8 ASP B 29 VAL B 31 5 3 HELIX 9 9 THR B 36 SER B 50 1 15 HELIX 10 10 ASN B 59 PHE B 63 5 5 HELIX 11 11 ALA B 116 VAL B 136 1 21 HELIX 12 12 LYS B 142 HIS B 157 1 16 HELIX 13 13 THR C 6 THR C 28 1 23 HELIX 14 14 ASP C 29 VAL C 31 5 3 HELIX 15 15 THR C 36 HIS C 51 1 16 HELIX 16 16 ASN C 59 PHE C 63 5 5 HELIX 17 17 ALA C 116 VAL C 136 1 21 HELIX 18 18 LYS C 142 HIS C 157 1 16 HELIX 19 19 THR D 6 THR D 28 1 23 HELIX 20 20 ASP D 29 VAL D 31 5 3 HELIX 21 21 THR D 36 SER D 50 1 15 HELIX 22 22 ASN D 59 PHE D 63 5 5 HELIX 23 23 ALA D 116 VAL D 136 1 21 HELIX 24 24 LYS D 142 HIS D 157 1 16 SHEET 1 A 3 ILE A 54 PRO A 55 0 SHEET 2 A 3 ILE A 90 LEU A 99 -1 O ILE A 98 N ILE A 54 SHEET 3 A 3 CYS A 68 ILE A 71 -1 N SER A 70 O ASN A 92 SHEET 1 B 3 ILE A 54 PRO A 55 0 SHEET 2 B 3 ILE A 90 LEU A 99 -1 O ILE A 98 N ILE A 54 SHEET 3 B 3 TRP A 102 TYR A 111 -1 O TRP A 102 N LEU A 99 SHEET 1 C 3 VAL A 74 CYS A 76 0 SHEET 2 C 3 VAL A 221 THR A 223 -1 O VAL A 221 N VAL A 75 SHEET 3 C 3 THR A 211 LEU A 213 -1 N ILE A 212 O THR A 222 SHEET 1 D 3 SER A 160 VAL A 161 0 SHEET 2 D 3 MET A 203 ASN A 205 -1 O ASN A 205 N SER A 160 SHEET 3 D 3 SER A 229 GLN A 231 -1 O ALA A 230 N ILE A 204 SHEET 1 E 2 GLY A 167 GLY A 169 0 SHEET 2 E 2 ASP A 176 ILE A 180 -1 O ILE A 180 N GLY A 167 SHEET 1 F 3 PHE A 197 VAL A 200 0 SHEET 2 F 3 HIS A 234 THR A 239 -1 O ILE A 236 N PHE A 198 SHEET 3 F 3 GLY A 242 ILE A 245 -1 O GLU A 244 N GLY A 237 SHEET 1 G 3 ILE B 54 PRO B 55 0 SHEET 2 G 3 ILE B 90 LEU B 99 -1 O ILE B 98 N ILE B 54 SHEET 3 G 3 CYS B 68 ILE B 71 -1 N SER B 70 O ASN B 92 SHEET 1 H 3 ILE B 54 PRO B 55 0 SHEET 2 H 3 ILE B 90 LEU B 99 -1 O ILE B 98 N ILE B 54 SHEET 3 H 3 TRP B 102 TYR B 111 -1 O THR B 106 N VAL B 95 SHEET 1 I 3 VAL B 74 CYS B 76 0 SHEET 2 I 3 VAL B 221 THR B 223 -1 O VAL B 221 N VAL B 75 SHEET 3 I 3 THR B 211 LEU B 213 -1 N ILE B 212 O THR B 222 SHEET 1 J 3 SER B 160 VAL B 161 0 SHEET 2 J 3 MET B 203 ASN B 205 -1 O ASN B 205 N SER B 160 SHEET 3 J 3 SER B 229 GLN B 231 -1 O ALA B 230 N ILE B 204 SHEET 1 K 2 GLY B 167 GLY B 169 0 SHEET 2 K 2 ASP B 176 ILE B 180 -1 O ILE B 180 N GLY B 167 SHEET 1 L 3 PHE B 197 VAL B 200 0 SHEET 2 L 3 HIS B 234 VAL B 238 -1 O ILE B 236 N PHE B 198 SHEET 3 L 3 PHE B 243 ILE B 245 -1 O GLU B 244 N GLY B 237 SHEET 1 M 3 ILE C 54 PRO C 55 0 SHEET 2 M 3 ILE C 90 LEU C 99 -1 O ILE C 98 N ILE C 54 SHEET 3 M 3 CYS C 68 ILE C 71 -1 N SER C 70 O ASN C 92 SHEET 1 N 3 ILE C 54 PRO C 55 0 SHEET 2 N 3 ILE C 90 LEU C 99 -1 O ILE C 98 N ILE C 54 SHEET 3 N 3 TRP C 102 TYR C 111 -1 O THR C 106 N VAL C 95 SHEET 1 O 3 VAL C 74 CYS C 76 0 SHEET 2 O 3 VAL C 221 THR C 223 -1 O VAL C 221 N VAL C 75 SHEET 3 O 3 THR C 211 LEU C 213 -1 N ILE C 212 O THR C 222 SHEET 1 P 3 SER C 160 VAL C 161 0 SHEET 2 P 3 MET C 203 ASN C 205 -1 O ASN C 205 N SER C 160 SHEET 3 P 3 SER C 229 GLN C 231 -1 O ALA C 230 N ILE C 204 SHEET 1 Q 2 GLY C 167 GLY C 169 0 SHEET 2 Q 2 ASP C 176 ILE C 180 -1 O ASP C 176 N GLY C 169 SHEET 1 R 3 PHE C 197 VAL C 200 0 SHEET 2 R 3 HIS C 234 VAL C 238 -1 O ILE C 236 N PHE C 198 SHEET 3 R 3 PHE C 243 ILE C 245 -1 O GLU C 244 N GLY C 237 SHEET 1 S 3 ILE D 54 PRO D 55 0 SHEET 2 S 3 ILE D 90 LEU D 99 -1 O ILE D 98 N ILE D 54 SHEET 3 S 3 CYS D 68 ILE D 71 -1 N SER D 70 O ASN D 92 SHEET 1 T 3 ILE D 54 PRO D 55 0 SHEET 2 T 3 ILE D 90 LEU D 99 -1 O ILE D 98 N ILE D 54 SHEET 3 T 3 TRP D 102 TYR D 111 -1 O THR D 106 N VAL D 95 SHEET 1 U 3 VAL D 74 CYS D 76 0 SHEET 2 U 3 VAL D 221 THR D 223 -1 O VAL D 221 N VAL D 75 SHEET 3 U 3 THR D 211 LEU D 213 -1 N ILE D 212 O THR D 222 SHEET 1 V 3 SER D 160 VAL D 161 0 SHEET 2 V 3 MET D 203 ASN D 205 -1 O ASN D 205 N SER D 160 SHEET 3 V 3 SER D 229 GLN D 231 -1 O ALA D 230 N ILE D 204 SHEET 1 W 2 GLY D 167 GLY D 169 0 SHEET 2 W 2 ASP D 176 ILE D 180 -1 O ASP D 176 N GLY D 169 SHEET 1 X 3 PHE D 197 VAL D 200 0 SHEET 2 X 3 HIS D 234 VAL D 238 -1 O ILE D 236 N PHE D 198 SHEET 3 X 3 PHE D 243 ILE D 245 -1 O GLU D 244 N GLY D 237 LINK O ASN A 72 NA NA A 251 1555 1555 2.33 LINK O VAL A 74 NA NA A 251 1555 1555 2.33 LINK OD1 ASP A 94 MN MN A 250 1555 1555 2.18 LINK OD2 ASP A 94 MN MN A 250 1555 1555 2.47 LINK OD2 ASP A 105 MN MN A 249 1555 1555 2.13 LINK OD1 ASP A 105 MN MN A 250 1555 1555 2.09 LINK NE2 HIS A 168 MN MN A 249 1555 1555 2.23 LINK OE1 GLU A 201 MN MN A 249 1555 1555 2.23 LINK O SER A 229 NA NA A 251 1555 1555 2.32 LINK OE2 GLU A 233 MN MN A 249 1555 1555 2.19 LINK OE1 GLU A 233 MN MN A 250 1555 1555 2.22 LINK MN MN A 249 O1 PO4 A 252 1555 1555 2.10 LINK MN MN A 249 O4 PO4 A 252 1555 1555 2.72 LINK MN MN A 250 O1 PO4 A 252 1555 1555 2.09 LINK MN MN A 250 O HOH A 728 1555 1555 2.13 LINK NA NA A 251 O HOH A 306 1555 1555 3.14 LINK NA NA A 251 O HOH A 726 1555 1555 2.24 LINK O ASN B 72 NA NA B 251 1555 1555 2.48 LINK O VAL B 74 NA NA B 251 1555 1555 2.24 LINK OD1 ASP B 94 MN MN B 250 1555 1555 2.20 LINK OD2 ASP B 94 MN MN B 250 1555 1555 2.53 LINK OD2 ASP B 105 MN MN B 249 1555 1555 2.27 LINK OD1 ASP B 105 MN MN B 250 1555 1555 2.15 LINK NE2 HIS B 168 MN MN B 249 1555 1555 2.21 LINK OE1 GLU B 201 MN MN B 249 1555 1555 2.19 LINK O SER B 229 NA NA B 251 1555 1555 2.36 LINK OE2 GLU B 233 MN MN B 249 1555 1555 2.15 LINK OE1 GLU B 233 MN MN B 250 1555 1555 2.17 LINK MN MN B 249 O2 PO4 B 252 1555 1555 2.11 LINK MN MN B 249 O3 PO4 B 252 1555 1555 2.61 LINK MN MN B 250 O2 PO4 B 252 1555 1555 1.99 LINK MN MN B 250 O HOH B 786 1555 1555 2.26 LINK NA NA B 251 O HOH B 309 1555 1555 2.17 LINK NA NA B 251 O HOH B 450 1555 1555 3.04 LINK O ASN C 72 NA NA C 251 1555 1555 2.37 LINK O VAL C 74 NA NA C 251 1555 1555 2.31 LINK OD1 ASP C 94 MN MN C 250 1555 1555 2.15 LINK OD2 ASP C 94 MN MN C 250 1555 1555 2.73 LINK OD2 ASP C 105 MN MN C 249 1555 1555 2.14 LINK OD1 ASP C 105 MN MN C 250 1555 1555 2.08 LINK NE2 HIS C 168 MN MN C 249 1555 1555 2.21 LINK OE1 GLU C 201 MN MN C 249 1555 1555 2.37 LINK O SER C 229 NA NA C 251 1555 1555 2.35 LINK OE2 GLU C 233 MN MN C 249 1555 1555 2.10 LINK OE1 GLU C 233 MN MN C 250 1555 1555 2.16 LINK MN MN C 249 O1 PO4 C 252 1555 1555 2.21 LINK MN MN C 249 O4 PO4 C 252 1555 1555 2.55 LINK MN MN C 250 O1 PO4 C 252 1555 1555 1.96 LINK MN MN C 250 O HOH C 712 1555 1555 2.24 LINK NA NA C 251 O HOH C 266 1555 1555 3.06 LINK NA NA C 251 O HOH C 277 1555 1555 2.26 LINK O ASN D 72 NA NA D 251 1555 1555 2.37 LINK O VAL D 74 NA NA D 251 1555 1555 2.27 LINK OD1 ASP D 94 MN MN D 250 1555 1555 2.18 LINK OD2 ASP D 94 MN MN D 250 1555 1555 2.44 LINK OD2 ASP D 105 MN MN D 249 1555 1555 2.18 LINK OD1 ASP D 105 MN MN D 250 1555 1555 2.12 LINK NE2 HIS D 168 MN MN D 249 1555 1555 2.15 LINK OE1 GLU D 201 MN MN D 249 1555 1555 2.14 LINK O SER D 229 NA NA D 251 1555 1555 2.30 LINK OE2 GLU D 233 MN MN D 249 1555 1555 2.09 LINK OE1 GLU D 233 MN MN D 250 1555 1555 2.15 LINK MN MN D 249 O3 PO4 D 252 1555 1555 2.08 LINK MN MN D 249 O2 PO4 D 252 1555 1555 2.74 LINK MN MN D 250 O3 PO4 D 252 1555 1555 2.14 LINK MN MN D 250 O HOH D 929 1555 1555 2.20 LINK NA NA D 251 O HOH D 280 1555 1555 2.29 LINK NA NA D 251 O HOH D 318 1555 1555 3.12 CISPEP 1 LYS A 177 PRO A 178 0 0.76 CISPEP 2 LYS B 177 PRO B 178 0 -5.23 CISPEP 3 LYS C 177 PRO C 178 0 2.16 CISPEP 4 LYS D 177 PRO D 178 0 1.69 SITE 1 AC1 6 ASP A 105 HIS A 168 GLU A 201 GLU A 233 SITE 2 AC1 6 MN A 250 PO4 A 252 SITE 1 AC2 6 ASP A 94 ASP A 105 GLU A 233 MN A 249 SITE 2 AC2 6 PO4 A 252 HOH A 728 SITE 1 AC3 4 ASN A 72 VAL A 74 SER A 229 HOH A 726 SITE 1 AC4 13 HIS A 77 ASP A 94 ASP A 105 HIS A 168 SITE 2 AC4 13 HIS A 175 GLU A 201 GLU A 233 MN A 249 SITE 3 AC4 13 MN A 250 HOH A 728 HOH A 742 HOH A 744 SITE 4 AC4 13 HOH A 760 SITE 1 AC5 6 ASP B 105 HIS B 168 GLU B 201 GLU B 233 SITE 2 AC5 6 MN B 250 PO4 B 252 SITE 1 AC6 6 ASP B 94 ASP B 105 GLU B 233 MN B 249 SITE 2 AC6 6 PO4 B 252 HOH B 786 SITE 1 AC7 5 ASN B 72 VAL B 74 SER B 229 HOH B 309 SITE 2 AC7 5 HOH B 450 SITE 1 AC8 14 HIS B 77 ASP B 94 ASP B 105 HIS B 168 SITE 2 AC8 14 HIS B 175 GLU B 201 GLU B 233 MN B 249 SITE 3 AC8 14 MN B 250 HOH B 785 HOH B 786 HOH B 787 SITE 4 AC8 14 HOH B 788 HOH B 799 SITE 1 AC9 6 ASP C 105 HIS C 168 GLU C 201 GLU C 233 SITE 2 AC9 6 MN C 250 PO4 C 252 SITE 1 BC1 6 ASP C 94 ASP C 105 GLU C 233 MN C 249 SITE 2 BC1 6 PO4 C 252 HOH C 712 SITE 1 BC2 5 ASN C 72 VAL C 74 SER C 229 HOH C 266 SITE 2 BC2 5 HOH C 277 SITE 1 BC3 11 HIS C 77 ASP C 94 ASP C 105 HIS C 168 SITE 2 BC3 11 HIS C 175 GLU C 201 GLU C 233 MN C 249 SITE 3 BC3 11 MN C 250 HOH C 626 HOH C 712 SITE 1 BC4 6 ASP D 105 HIS D 168 GLU D 201 GLU D 233 SITE 2 BC4 6 MN D 250 PO4 D 252 SITE 1 BC5 6 ASP D 94 ASP D 105 GLU D 233 MN D 249 SITE 2 BC5 6 PO4 D 252 HOH D 929 SITE 1 BC6 4 ASN D 72 VAL D 74 SER D 229 HOH D 280 SITE 1 BC7 11 HIS D 77 ASP D 94 ASP D 105 HIS D 168 SITE 2 BC7 11 PHE D 174 HIS D 175 GLU D 201 GLU D 233 SITE 3 BC7 11 MN D 249 MN D 250 HOH D 929 SITE 1 BC8 3 TYR D 60 PHE D 174 HIS D 175 SITE 1 BC9 3 LYS D 3 HIS D 5 ARG D 172 CRYST1 42.480 114.850 115.800 90.00 92.66 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023540 0.000000 0.001094 0.00000 SCALE2 0.000000 0.008707 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008645 0.00000