HEADER HYDROLASE 29-APR-10 3MRU TITLE CRYSTAL STRUCTURE OF AMINOACYLHISTIDINE DIPEPTIDASE FROM VIBRIO TITLE 2 ALGINOLYTICUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINOACYL-HISTIDINE DIPEPTIDASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: XAA-HIS DIPEPTIDASE; COMPND 5 EC: 3.4.13.3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO ALGINOLYTICUS; SOURCE 3 ORGANISM_TAXID: 663; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS METALLOPROTEASE, HOMODIMER, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.-Y.CHANG,Y.-C.HSIEH,T.-K.WU,C.-J.CHEN REVDAT 5 01-NOV-23 3MRU 1 REMARK LINK REVDAT 4 15-DEC-10 3MRU 1 JRNL REVDAT 3 22-SEP-10 3MRU 1 AUTHOR JRNL REVDAT 2 08-SEP-10 3MRU 1 JRNL REVDAT 1 01-SEP-10 3MRU 0 JRNL AUTH C.-Y.CHANG,Y.-C.HSIEH,T.-Y.WANG,Y.-C.CHEN,Y.-K.WANG, JRNL AUTH 2 T.-W.CHIANG,Y.-J.CHEN,C.-H.CHANG,C.-J.CHEN,T.-K.WU JRNL TITL CRYSTAL STRUCTURE AND MUTATIONAL ANALYSIS OF JRNL TITL 2 AMINOACYLHISTIDINE DIPEPTIDASE FROM VIBRIO ALGINOLYTICUS JRNL TITL 3 REVEAL A NEW ARCHITECTURE OF M20 METALLOPEPTIDASES JRNL REF J.BIOL.CHEM. V. 285 39500 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 20819954 JRNL DOI 10.1074/JBC.M110.139683 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.21 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 21843 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2174 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7526 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 86.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.60800 REMARK 3 B22 (A**2) : 2.60800 REMARK 3 B33 (A**2) : -5.21600 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 75.71 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : CNS_TOPPAR:PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CNS_TOPPAR:ION.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFMAC WAS ALSO USED IN REFINEMENT. REMARK 4 REMARK 4 3MRU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-MAY-10. REMARK 100 THE DEPOSITION ID IS D_1000058920. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-AUG-06; 29-APR-06 REMARK 200 TEMPERATURE (KELVIN) : 110.0; 110.0 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SPRING-8; NSRRC REMARK 200 BEAMLINE : BL12B2; BL13B1 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1; 1 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4R; ADSC QUANTUM REMARK 200 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21851 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : 0.04600 REMARK 200 FOR THE DATA SET : 17.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.35200 REMARK 200 R SYM FOR SHELL (I) : 0.32000 REMARK 200 FOR SHELL : 4.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2QYV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28%(V/V) PEG 400, 0.2M CALCIUM REMARK 280 CHLORIDE, 0.1M HEPES-NA BUFFER, PH 7.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 202.06333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 101.03167 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 151.54750 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 50.51583 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 252.57917 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 54 CD1 LEU A 159 1.40 REMARK 500 CG LYS A 73 O PRO A 487 1.58 REMARK 500 O ASN A 120 N GLY A 123 1.90 REMARK 500 O PHE B 441 O PRO B 444 1.91 REMARK 500 O ALA B 413 OD1 ASP B 417 2.07 REMARK 500 O GLY B 334 CE MET B 336 2.13 REMARK 500 OD2 ASP A 148 O ALA A 151 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 HIS A 28 N - CA - CB ANGL. DEV. = -12.9 DEGREES REMARK 500 ALA A 161 CB - CA - C ANGL. DEV. = -13.6 DEGREES REMARK 500 GLU B 3 N - CA - C ANGL. DEV. = -22.6 DEGREES REMARK 500 ALA B 161 CB - CA - C ANGL. DEV. = 9.0 DEGREES REMARK 500 ASP B 312 N - CA - C ANGL. DEV. = 17.9 DEGREES REMARK 500 TYR B 423 CB - CA - C ANGL. DEV. = 13.8 DEGREES REMARK 500 PRO B 446 CB - CA - C ANGL. DEV. = -13.2 DEGREES REMARK 500 PHE B 453 CB - CA - C ANGL. DEV. = -16.8 DEGREES REMARK 500 PRO B 487 CB - CA - C ANGL. DEV. = -14.2 DEGREES REMARK 500 GLU B 488 N - CA - C ANGL. DEV. = 17.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 31 -2.70 74.79 REMARK 500 ALA A 35 -48.49 139.83 REMARK 500 LYS A 72 -168.90 66.95 REMARK 500 LYS A 73 -16.09 157.77 REMARK 500 ASP A 90 37.62 150.16 REMARK 500 ASP A 148 101.91 73.56 REMARK 500 ALA A 313 -117.28 141.12 REMARK 500 GLN A 314 99.95 70.91 REMARK 500 ASN A 360 -0.53 83.41 REMARK 500 PHE A 459 40.00 74.84 REMARK 500 PRO A 463 -3.12 -54.26 REMARK 500 GLU A 465 96.89 -42.57 REMARK 500 LYS B 31 -5.13 85.46 REMARK 500 LEU B 159 -168.59 139.44 REMARK 500 ASP B 223 2.90 -66.19 REMARK 500 ASP B 247 -2.14 70.47 REMARK 500 SER B 257 -80.04 -116.83 REMARK 500 ASN B 360 -12.44 83.21 REMARK 500 TYR B 423 -147.11 83.25 REMARK 500 LYS B 426 156.33 171.91 REMARK 500 PHE B 459 48.03 80.11 REMARK 500 PRO B 463 -3.32 -52.78 REMARK 500 PRO B 487 -156.24 -99.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 VAL A 342 GLU A 343 145.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 PRO B 487 -10.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 491 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 119 OD2 REMARK 620 2 HIS A 461 NE2 114.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 492 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 119 OD1 REMARK 620 2 ASP A 173 OD2 82.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 492 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 80 NE2 REMARK 620 2 ASP B 119 OD1 66.9 REMARK 620 3 ASP B 173 OD2 108.1 91.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 491 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 119 OD2 REMARK 620 2 HIS B 461 NE2 101.4 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 491 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 492 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 491 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 492 DBREF 3MRU A 1 490 UNP Q2LD50 Q2LD50_VIBAL 1 490 DBREF 3MRU B 1 490 UNP Q2LD50 Q2LD50_VIBAL 1 490 SEQRES 1 A 490 MET SER GLU PHE HIS SER GLU ILE SER THR LEU SER PRO SEQRES 2 A 490 ALA PRO LEU TRP GLN PHE PHE ASP LYS ILE CYS SER ILE SEQRES 3 A 490 PRO HIS PRO SER LYS HIS GLU GLU ALA LEU ALA GLN TYR SEQRES 4 A 490 ILE VAL THR TRP ALA THR GLU GLN GLY PHE ASP VAL ARG SEQRES 5 A 490 ARG ASP PRO THR GLY ASN VAL PHE ILE LYS LYS PRO ALA SEQRES 6 A 490 THR PRO GLY MET GLU ASN LYS LYS GLY VAL VAL LEU GLN SEQRES 7 A 490 ALA HIS ILE ASP MET VAL PRO GLN LYS ASN GLU ASP THR SEQRES 8 A 490 ASP HIS ASP PHE THR GLN ASP PRO ILE GLN PRO TYR ILE SEQRES 9 A 490 ASP GLY GLU TRP VAL THR ALA LYS GLY THR THR LEU GLY SEQRES 10 A 490 ALA ASP ASN GLY ILE GLY MET ALA SER CYS LEU ALA VAL SEQRES 11 A 490 LEU ALA SER LYS GLU ILE LYS HIS GLY PRO ILE GLU VAL SEQRES 12 A 490 LEU LEU THR ILE ASP GLU GLU ALA GLY MET THR GLY ALA SEQRES 13 A 490 PHE GLY LEU GLU ALA GLY TRP LEU LYS GLY ASP ILE LEU SEQRES 14 A 490 LEU ASN THR ASP SER GLU GLN GLU GLY GLU VAL TYR MET SEQRES 15 A 490 GLY CYS ALA GLY GLY ILE ASP GLY ALA MET THR PHE ASP SEQRES 16 A 490 ILE THR ARG ASP ALA ILE PRO ALA GLY PHE ILE THR ARG SEQRES 17 A 490 GLN LEU THR LEU LYS GLY LEU LYS GLY GLY HIS SER GLY SEQRES 18 A 490 CYS ASP ILE HIS THR GLY ARG GLY ASN ALA ASN LYS LEU SEQRES 19 A 490 ILE GLY ARG PHE LEU ALA GLY HIS ALA GLN GLU LEU ASP SEQRES 20 A 490 LEU ARG LEU VAL GLU PHE ARG GLY GLY SER LEU ARG ASN SEQRES 21 A 490 ALA ILE PRO ARG GLU ALA PHE VAL THR VAL ALA LEU PRO SEQRES 22 A 490 ALA GLU ASN GLN ASP LYS LEU ALA GLU LEU PHE ASN TYR SEQRES 23 A 490 TYR THR GLU LEU LEU LYS THR GLU LEU GLY LYS ILE GLU SEQRES 24 A 490 THR ASP ILE VAL THR PHE ASN GLU GLU VAL ALA THR ASP SEQRES 25 A 490 ALA GLN VAL PHE ALA ILE ALA ASP GLN GLN ARG PHE ILE SEQRES 26 A 490 ALA ALA LEU ASN ALA CYS PRO ASN GLY VAL MET ARG MET SEQRES 27 A 490 SER ASP GLU VAL GLU GLY VAL VAL GLU THR SER LEU ASN SEQRES 28 A 490 VAL GLY VAL ILE THR THR GLU GLU ASN LYS VAL THR VAL SEQRES 29 A 490 LEU CYS LEU ILE ARG SER LEU ILE ASP SER GLY ARG SER SEQRES 30 A 490 GLN VAL GLU GLY MET LEU GLN SER VAL ALA GLU LEU ALA SEQRES 31 A 490 GLY ALA GLN ILE GLU PHE SER GLY ALA TYR PRO GLY TRP SEQRES 32 A 490 LYS PRO ASP ALA ASP SER GLU ILE MET ALA ILE PHE ARG SEQRES 33 A 490 ASP MET TYR GLU GLY ILE TYR GLY HIS LYS PRO ASN ILE SEQRES 34 A 490 MET VAL ILE HIS ALA GLY LEU GLU CYS GLY LEU PHE LYS SEQRES 35 A 490 GLU PRO TYR PRO ASN MET ASP MET VAL SER PHE GLY PRO SEQRES 36 A 490 THR ILE LYS PHE PRO HIS SER PRO ASP GLU LYS VAL LYS SEQRES 37 A 490 ILE ASP THR VAL GLN LEU PHE TRP ASP GLN MET VAL ALA SEQRES 38 A 490 LEU LEU GLU ALA ILE PRO GLU LYS ALA SEQRES 1 B 490 MET SER GLU PHE HIS SER GLU ILE SER THR LEU SER PRO SEQRES 2 B 490 ALA PRO LEU TRP GLN PHE PHE ASP LYS ILE CYS SER ILE SEQRES 3 B 490 PRO HIS PRO SER LYS HIS GLU GLU ALA LEU ALA GLN TYR SEQRES 4 B 490 ILE VAL THR TRP ALA THR GLU GLN GLY PHE ASP VAL ARG SEQRES 5 B 490 ARG ASP PRO THR GLY ASN VAL PHE ILE LYS LYS PRO ALA SEQRES 6 B 490 THR PRO GLY MET GLU ASN LYS LYS GLY VAL VAL LEU GLN SEQRES 7 B 490 ALA HIS ILE ASP MET VAL PRO GLN LYS ASN GLU ASP THR SEQRES 8 B 490 ASP HIS ASP PHE THR GLN ASP PRO ILE GLN PRO TYR ILE SEQRES 9 B 490 ASP GLY GLU TRP VAL THR ALA LYS GLY THR THR LEU GLY SEQRES 10 B 490 ALA ASP ASN GLY ILE GLY MET ALA SER CYS LEU ALA VAL SEQRES 11 B 490 LEU ALA SER LYS GLU ILE LYS HIS GLY PRO ILE GLU VAL SEQRES 12 B 490 LEU LEU THR ILE ASP GLU GLU ALA GLY MET THR GLY ALA SEQRES 13 B 490 PHE GLY LEU GLU ALA GLY TRP LEU LYS GLY ASP ILE LEU SEQRES 14 B 490 LEU ASN THR ASP SER GLU GLN GLU GLY GLU VAL TYR MET SEQRES 15 B 490 GLY CYS ALA GLY GLY ILE ASP GLY ALA MET THR PHE ASP SEQRES 16 B 490 ILE THR ARG ASP ALA ILE PRO ALA GLY PHE ILE THR ARG SEQRES 17 B 490 GLN LEU THR LEU LYS GLY LEU LYS GLY GLY HIS SER GLY SEQRES 18 B 490 CYS ASP ILE HIS THR GLY ARG GLY ASN ALA ASN LYS LEU SEQRES 19 B 490 ILE GLY ARG PHE LEU ALA GLY HIS ALA GLN GLU LEU ASP SEQRES 20 B 490 LEU ARG LEU VAL GLU PHE ARG GLY GLY SER LEU ARG ASN SEQRES 21 B 490 ALA ILE PRO ARG GLU ALA PHE VAL THR VAL ALA LEU PRO SEQRES 22 B 490 ALA GLU ASN GLN ASP LYS LEU ALA GLU LEU PHE ASN TYR SEQRES 23 B 490 TYR THR GLU LEU LEU LYS THR GLU LEU GLY LYS ILE GLU SEQRES 24 B 490 THR ASP ILE VAL THR PHE ASN GLU GLU VAL ALA THR ASP SEQRES 25 B 490 ALA GLN VAL PHE ALA ILE ALA ASP GLN GLN ARG PHE ILE SEQRES 26 B 490 ALA ALA LEU ASN ALA CYS PRO ASN GLY VAL MET ARG MET SEQRES 27 B 490 SER ASP GLU VAL GLU GLY VAL VAL GLU THR SER LEU ASN SEQRES 28 B 490 VAL GLY VAL ILE THR THR GLU GLU ASN LYS VAL THR VAL SEQRES 29 B 490 LEU CYS LEU ILE ARG SER LEU ILE ASP SER GLY ARG SER SEQRES 30 B 490 GLN VAL GLU GLY MET LEU GLN SER VAL ALA GLU LEU ALA SEQRES 31 B 490 GLY ALA GLN ILE GLU PHE SER GLY ALA TYR PRO GLY TRP SEQRES 32 B 490 LYS PRO ASP ALA ASP SER GLU ILE MET ALA ILE PHE ARG SEQRES 33 B 490 ASP MET TYR GLU GLY ILE TYR GLY HIS LYS PRO ASN ILE SEQRES 34 B 490 MET VAL ILE HIS ALA GLY LEU GLU CYS GLY LEU PHE LYS SEQRES 35 B 490 GLU PRO TYR PRO ASN MET ASP MET VAL SER PHE GLY PRO SEQRES 36 B 490 THR ILE LYS PHE PRO HIS SER PRO ASP GLU LYS VAL LYS SEQRES 37 B 490 ILE ASP THR VAL GLN LEU PHE TRP ASP GLN MET VAL ALA SEQRES 38 B 490 LEU LEU GLU ALA ILE PRO GLU LYS ALA HET ZN A 491 1 HET ZN A 492 1 HET ZN B 491 1 HET ZN B 492 1 HETNAM ZN ZINC ION FORMUL 3 ZN 4(ZN 2+) HELIX 1 1 GLU A 7 LEU A 11 5 5 HELIX 2 2 PRO A 13 ILE A 26 1 14 HELIX 3 3 ALA A 35 GLN A 47 1 13 HELIX 4 4 GLY A 117 ILE A 122 1 6 HELIX 5 5 GLY A 123 SER A 133 1 11 HELIX 6 6 MET A 153 GLY A 158 5 6 HELIX 7 7 ASN A 230 ALA A 243 1 14 HELIX 8 8 ASN A 276 GLY A 296 1 21 HELIX 9 9 ALA A 317 CYS A 331 1 15 HELIX 10 10 ILE A 372 ALA A 390 1 19 HELIX 11 11 SER A 409 GLY A 421 1 13 HELIX 12 12 LEU A 436 PHE A 441 1 6 HELIX 13 13 ILE A 469 ILE A 486 1 18 HELIX 14 14 GLU B 7 LEU B 11 5 5 HELIX 15 15 PRO B 13 CYS B 24 1 12 HELIX 16 16 GLU B 33 THR B 45 1 13 HELIX 17 17 GLY B 117 ALA B 132 1 16 HELIX 18 18 MET B 153 GLY B 158 1 6 HELIX 19 19 CYS B 222 THR B 226 5 5 HELIX 20 20 ASN B 230 ASP B 247 1 18 HELIX 21 21 ASN B 276 GLY B 296 1 21 HELIX 22 22 ALA B 317 CYS B 331 1 15 HELIX 23 23 ILE B 372 ALA B 390 1 19 HELIX 24 24 SER B 409 ASP B 417 1 9 HELIX 25 25 LEU B 436 GLU B 443 5 8 HELIX 26 26 ILE B 469 ALA B 485 1 17 SHEET 1 A 6 ASP A 50 ARG A 53 0 SHEET 2 A 6 VAL A 59 LYS A 63 -1 O LYS A 62 N ASP A 50 SHEET 3 A 6 ILE A 141 THR A 146 -1 O ILE A 141 N LYS A 63 SHEET 4 A 6 VAL A 75 HIS A 80 1 N LEU A 77 O LEU A 144 SHEET 5 A 6 ILE A 168 ASN A 171 1 O LEU A 170 N VAL A 76 SHEET 6 A 6 ASP A 449 SER A 452 1 O VAL A 451 N ASN A 171 SHEET 1 B 4 PRO A 102 ASP A 105 0 SHEET 2 B 4 TRP A 108 ALA A 111 -1 O THR A 110 N TYR A 103 SHEET 3 B 4 LYS A 466 LYS A 468 -1 O VAL A 467 N VAL A 109 SHEET 4 B 4 ILE A 457 LYS A 458 -1 N LYS A 458 O LYS A 466 SHEET 1 C 2 TYR A 181 CYS A 184 0 SHEET 2 C 2 MET A 430 ILE A 432 1 O MET A 430 N MET A 182 SHEET 1 D 6 VAL A 303 GLU A 308 0 SHEET 2 D 6 PHE A 205 LYS A 213 -1 N GLN A 209 O GLU A 307 SHEET 3 D 6 ALA A 266 PRO A 273 -1 O ALA A 266 N LEU A 212 SHEET 4 D 6 ARG A 249 GLY A 255 -1 N ARG A 249 O ALA A 271 SHEET 5 D 6 VAL A 346 GLU A 358 -1 O ILE A 355 N GLY A 255 SHEET 6 D 6 GLY A 334 MET A 338 -1 N GLY A 334 O LEU A 350 SHEET 1 E 8 VAL A 303 GLU A 308 0 SHEET 2 E 8 PHE A 205 LYS A 213 -1 N GLN A 209 O GLU A 307 SHEET 3 E 8 ALA A 266 PRO A 273 -1 O ALA A 266 N LEU A 212 SHEET 4 E 8 ARG A 249 GLY A 255 -1 N ARG A 249 O ALA A 271 SHEET 5 E 8 VAL A 346 GLU A 358 -1 O ILE A 355 N GLY A 255 SHEET 6 E 8 LYS A 361 SER A 370 -1 O LEU A 365 N VAL A 354 SHEET 7 E 8 GLY A 186 ASP A 195 -1 N GLY A 186 O SER A 370 SHEET 8 E 8 GLN A 393 TYR A 400 -1 O GLN A 393 N THR A 193 SHEET 1 F 2 ARG A 198 ASP A 199 0 SHEET 2 F 2 VAL A 315 PHE A 316 -1 O VAL A 315 N ASP A 199 SHEET 1 G 2 GLY A 218 HIS A 219 0 SHEET 2 G 2 ALA A 261 ILE A 262 -1 O ILE A 262 N GLY A 218 SHEET 1 H 6 VAL B 51 ARG B 53 0 SHEET 2 H 6 VAL B 59 LYS B 63 -1 O PHE B 60 N ARG B 52 SHEET 3 H 6 ILE B 141 THR B 146 -1 O ILE B 141 N LYS B 63 SHEET 4 H 6 VAL B 75 HIS B 80 1 N LEU B 77 O LEU B 144 SHEET 5 H 6 ILE B 168 ASN B 171 1 O LEU B 170 N VAL B 76 SHEET 6 H 6 ASP B 449 SER B 452 1 O VAL B 451 N ASN B 171 SHEET 1 I 4 PRO B 102 ASP B 105 0 SHEET 2 I 4 TRP B 108 ALA B 111 -1 O THR B 110 N TYR B 103 SHEET 3 I 4 LYS B 466 LYS B 468 -1 O VAL B 467 N VAL B 109 SHEET 4 I 4 ILE B 457 LYS B 458 -1 N LYS B 458 O LYS B 466 SHEET 1 J 2 GLU B 179 CYS B 184 0 SHEET 2 J 2 ASN B 428 ILE B 432 1 O MET B 430 N VAL B 180 SHEET 1 K 5 ARG B 337 MET B 338 0 SHEET 2 K 5 VAL B 346 GLU B 358 -1 O THR B 348 N ARG B 337 SHEET 3 K 5 LYS B 361 SER B 370 -1 O LEU B 365 N VAL B 354 SHEET 4 K 5 GLY B 186 ASP B 195 -1 N GLY B 186 O SER B 370 SHEET 5 K 5 GLN B 393 TYR B 400 -1 O SER B 397 N ASP B 189 SHEET 1 L 2 ARG B 198 ASP B 199 0 SHEET 2 L 2 VAL B 315 PHE B 316 -1 O VAL B 315 N ASP B 199 SHEET 1 M 4 ARG B 249 GLY B 255 0 SHEET 2 M 4 ALA B 266 PRO B 273 -1 O ALA B 271 N ARG B 249 SHEET 3 M 4 PHE B 205 LYS B 213 -1 N ARG B 208 O VAL B 270 SHEET 4 M 4 VAL B 303 VAL B 309 -1 O VAL B 303 N LYS B 213 LINK OD2 ASP A 119 ZN ZN A 491 1555 1555 2.51 LINK OD1 ASP A 119 ZN ZN A 492 1555 1555 2.55 LINK OD2 ASP A 173 ZN ZN A 492 1555 1555 2.37 LINK NE2 HIS A 461 ZN ZN A 491 1555 1555 2.58 LINK NE2 HIS B 80 ZN ZN B 492 1555 1555 2.70 LINK OD2 ASP B 119 ZN ZN B 491 1555 1555 2.53 LINK OD1 ASP B 119 ZN ZN B 492 1555 1555 2.24 LINK OD2 ASP B 173 ZN ZN B 492 1555 1555 2.24 LINK NE2 HIS B 461 ZN ZN B 491 1555 1555 2.65 CISPEP 1 SER A 12 PRO A 13 0 5.98 CISPEP 2 ASP A 119 ASN A 120 0 -1.50 CISPEP 3 ASP A 312 ALA A 313 0 -6.95 CISPEP 4 SER B 12 PRO B 13 0 -0.38 CISPEP 5 ASP B 119 ASN B 120 0 -0.08 CISPEP 6 GLY B 424 HIS B 425 0 -2.31 SITE 1 AC1 4 ASP A 119 GLU A 149 HIS A 461 ZN A 492 SITE 1 AC2 5 HIS A 80 ASP A 119 GLU A 149 ASP A 173 SITE 2 AC2 5 ZN A 491 SITE 1 AC3 4 ASP B 119 GLU B 149 HIS B 461 ZN B 492 SITE 1 AC4 6 HIS B 80 ASP B 119 ASN B 120 GLU B 149 SITE 2 AC4 6 ASP B 173 ZN B 491 CRYST1 80.407 80.407 303.095 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012437 0.007180 0.000000 0.00000 SCALE2 0.000000 0.014361 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003299 0.00000