HEADER HYDROLASE 30-APR-10 3MTG TITLE CRYSTAL STRUCTURE OF HUMAN S-ADENOSYL HOMOCYSTEINE HYDROLASE-LIKE 1 TITLE 2 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE ADENOSYLHOMOCYSTEINASE 2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: SAHH-LIKE DOMAIN (UNP RESIDUES 89:530); COMPND 5 SYNONYM: ADOHCYASE 2, S-ADENOSYL-L-HOMOCYSTEINE HYDROLASE 2, S- COMPND 6 ADENOSYLHOMOCYSTEINE HYDROLASE-LIKE PROTEIN 1, DC-EXPRESSED AHCY-LIKE COMPND 7 MOLECULE; COMPND 8 EC: 3.3.1.1; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AHCYL1, DCAL, IRBIT, XPVKONA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) R3 PRARE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PNIC-NHS KEYWDS ALPHA/BETA DOMAIN, TETRAMER, CATALYTIC DOMAIN, CO-FACTOR BINDING KEYWDS 2 DOMAIN, NAD, STRUCTURAL GENOMICS CONSORTIUM, SGC, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.WISNIEWSKA,M.I.SIPONEN,C.H.ARROWSMITH,H.BERGLUND,C.BOUNTRA, AUTHOR 2 R.COLLINS,A.M.EDWARDS,S.FLODIN,A.FLORES,S.GRASLUND,M.HAMMARSTROM, AUTHOR 3 I.JOHANSSON,T.KARLBERG,T.KOTENYOVA,M.MOCHE,P.NORDLUND,T.NYMAN, AUTHOR 4 C.PERSSON,P.SCHUTZ,A.G.THORSELL,L.TRESAUGUES,S.VAN DER BERG, AUTHOR 5 E.WAHLBERG,J.WEIGELT,M.WELIN,H.SCHULER,STRUCTURAL GENOMICS AUTHOR 6 CONSORTIUM (SGC) REVDAT 2 06-SEP-23 3MTG 1 REMARK SEQADV REVDAT 1 26-MAY-10 3MTG 0 JRNL AUTH M.WISNIEWSKA,M.I.SIPONEN,C.H.ARROWSMITH,H.BERGLUND, JRNL AUTH 2 C.BOUNTRA,R.COLLINS,A.M.EDWARDS,S.FLODIN,A.FLORES, JRNL AUTH 3 S.GRASLUND,M.HAMMARSTROM,I.JOHANSSON,T.KARLBERG,T.KOTENYOVA, JRNL AUTH 4 M.MOCHE,P.NORDLUND,T.NYMAN,C.PERSSON,P.SCHUTZ,A.G.THORSELL, JRNL AUTH 5 L.TRESAUGUES,S.VAN DER BERG,E.WAHLBERG,J.WEIGELT,M.WELIN, JRNL AUTH 6 H.SCHULER JRNL TITL CRYSTAL STRUCTURE OF HUMAN S-ADENOSYL HOMOCYSTEINE JRNL TITL 2 HYDROLASE-LIKE 1 PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.9.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 30251 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.080 REMARK 3 FREE R VALUE TEST SET COUNT : 628 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 15 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.64 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.73 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2938 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2141 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2877 REMARK 3 BIN R VALUE (WORKING SET) : 0.2133 REMARK 3 BIN FREE R VALUE : 0.2543 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 2.08 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 61 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6590 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 88 REMARK 3 SOLVENT ATOMS : 114 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 69.89 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 83.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.50970 REMARK 3 B22 (A**2) : -13.23690 REMARK 3 B33 (A**2) : 15.74660 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -8.85800 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 1.018 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.917 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.869 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 6804 ; 2.000 ; NULL REMARK 3 BOND ANGLES : 9247 ; 2.000 ; NULL REMARK 3 TORSION ANGLES : 3171 ; 2.000 ; NULL REMARK 3 TRIGONAL CARBON PLANES : 171 ; 2.000 ; NULL REMARK 3 GENERAL PLANES : 979 ; 5.000 ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS : 6804 ; 20.000 ; NULL REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 890 ; 5.000 ; NULL REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 7981 ; 4.000 ; NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.15 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.20 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 3.36 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|123 - A|221 } REMARK 3 ORIGIN FOR THE GROUP (A): 40.3696 16.9813 -9.0530 REMARK 3 T TENSOR REMARK 3 T11: 0.1629 T22: 1.9060 REMARK 3 T33: 0.4281 T12: 0.3602 REMARK 3 T13: -0.1357 T23: 0.0680 REMARK 3 L TENSOR REMARK 3 L11: 0.0988 L22: 3.1655 REMARK 3 L33: 3.9320 L12: 0.7446 REMARK 3 L13: 0.1207 L23: -2.8274 REMARK 3 S TENSOR REMARK 3 S11: 0.2133 S12: -1.0270 S13: -0.1103 REMARK 3 S21: -0.3326 S22: -0.5353 S23: -0.0952 REMARK 3 S31: 0.6552 S32: 0.8721 S33: 0.3220 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|222 - A|316 } REMARK 3 ORIGIN FOR THE GROUP (A): 48.6201 32.3925 -13.1873 REMARK 3 T TENSOR REMARK 3 T11: 0.1290 T22: 1.7627 REMARK 3 T33: 0.3380 T12: -0.0139 REMARK 3 T13: -0.0745 T23: -0.1080 REMARK 3 L TENSOR REMARK 3 L11: 6.1222 L22: 1.5650 REMARK 3 L33: 3.1321 L12: 0.6556 REMARK 3 L13: 4.1989 L23: -0.5802 REMARK 3 S TENSOR REMARK 3 S11: 0.1992 S12: -1.1294 S13: 0.1252 REMARK 3 S21: 0.0168 S22: -0.3831 S23: -0.2407 REMARK 3 S31: -0.2253 S32: 1.2055 S33: 0.1839 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { A|317 - A|463 } REMARK 3 ORIGIN FOR THE GROUP (A): 23.9987 51.8750 -23.8709 REMARK 3 T TENSOR REMARK 3 T11: 0.6811 T22: 0.1768 REMARK 3 T33: 0.3864 T12: -0.1836 REMARK 3 T13: 0.1933 T23: -0.1511 REMARK 3 L TENSOR REMARK 3 L11: 1.2040 L22: 2.0314 REMARK 3 L33: 4.6164 L12: -0.2003 REMARK 3 L13: -0.1799 L23: 0.8743 REMARK 3 S TENSOR REMARK 3 S11: 0.2832 S12: -0.2644 S13: 0.2915 REMARK 3 S21: 0.4917 S22: 0.2374 S23: 0.0558 REMARK 3 S31: -1.1374 S32: 0.8300 S33: -0.5206 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { A|464 - A|552 } REMARK 3 ORIGIN FOR THE GROUP (A): 43.7723 23.0730 -31.5185 REMARK 3 T TENSOR REMARK 3 T11: 0.3447 T22: 1.1205 REMARK 3 T33: 0.3572 T12: 0.4272 REMARK 3 T13: -0.0049 T23: 0.0147 REMARK 3 L TENSOR REMARK 3 L11: 1.0768 L22: 2.5436 REMARK 3 L33: 3.5776 L12: 0.1340 REMARK 3 L13: -0.1784 L23: -0.8441 REMARK 3 S TENSOR REMARK 3 S11: -0.1220 S12: -0.6120 S13: -0.0662 REMARK 3 S21: -0.2431 S22: -0.1129 S23: -0.3596 REMARK 3 S31: 0.7520 S32: 1.7719 S33: 0.2350 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { B|123 - B|175 } REMARK 3 ORIGIN FOR THE GROUP (A): 47.5427 55.9477 -64.7722 REMARK 3 T TENSOR REMARK 3 T11: 0.8876 T22: 0.6238 REMARK 3 T33: 0.7875 T12: -0.3323 REMARK 3 T13: 0.6536 T23: -0.0680 REMARK 3 L TENSOR REMARK 3 L11: 3.4140 L22: 9.6205 REMARK 3 L33: 12.5230 L12: 1.6911 REMARK 3 L13: -1.0847 L23: 1.7229 REMARK 3 S TENSOR REMARK 3 S11: 0.5328 S12: 0.0168 S13: 0.9412 REMARK 3 S21: -1.2635 S22: -0.3701 S23: -0.8400 REMARK 3 S31: -1.9799 S32: 0.8315 S33: -0.1627 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { B|176 - B|317 } REMARK 3 ORIGIN FOR THE GROUP (A): 53.2275 41.9200 -61.8483 REMARK 3 T TENSOR REMARK 3 T11: 0.4213 T22: 1.0319 REMARK 3 T33: 0.6953 T12: -0.1994 REMARK 3 T13: 0.3737 T23: -0.2301 REMARK 3 L TENSOR REMARK 3 L11: 2.6591 L22: 4.4061 REMARK 3 L33: 3.4060 L12: -1.7446 REMARK 3 L13: -1.8755 L23: 0.4739 REMARK 3 S TENSOR REMARK 3 S11: 0.5442 S12: -0.3397 S13: 0.5607 REMARK 3 S21: -0.8810 S22: -0.0655 S23: -1.2962 REMARK 3 S31: -0.2504 S32: 1.5209 S33: -0.4786 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: { B|318 - B|465 } REMARK 3 ORIGIN FOR THE GROUP (A): 28.6646 18.8347 -56.2264 REMARK 3 T TENSOR REMARK 3 T11: 0.9351 T22: 0.1399 REMARK 3 T33: 0.3061 T12: 0.1194 REMARK 3 T13: 0.0250 T23: -0.0283 REMARK 3 L TENSOR REMARK 3 L11: 1.5870 L22: 2.5896 REMARK 3 L33: 4.3392 L12: 0.2166 REMARK 3 L13: -1.2935 L23: -0.1507 REMARK 3 S TENSOR REMARK 3 S11: -0.2893 S12: 0.0244 S13: -0.1559 REMARK 3 S21: -0.8502 S22: 0.1649 S23: -0.1333 REMARK 3 S31: 1.4997 S32: 0.2929 S33: 0.1244 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: { B|466 - B|552 } REMARK 3 ORIGIN FOR THE GROUP (A): 45.6867 48.1474 -42.9211 REMARK 3 T TENSOR REMARK 3 T11: 0.3752 T22: 1.1088 REMARK 3 T33: 0.5426 T12: -0.3985 REMARK 3 T13: 0.1770 T23: -0.3169 REMARK 3 L TENSOR REMARK 3 L11: 1.0586 L22: 3.0703 REMARK 3 L33: 2.2229 L12: 0.3538 REMARK 3 L13: -0.9222 L23: -0.5165 REMARK 3 S TENSOR REMARK 3 S11: 0.3649 S12: -0.4800 S13: 0.1480 REMARK 3 S21: 0.0981 S22: -0.0019 S23: -0.7017 REMARK 3 S31: -0.7174 S32: 1.8760 S33: -0.3630 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3MTG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-APR-10. REMARK 100 THE DEPOSITION ID IS D_1000058974. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR, REMARK 200 SI111 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30565 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.640 REMARK 200 RESOLUTION RANGE LOW (A) : 46.625 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : 0.07000 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.78 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 7.70 REMARK 200 R MERGE FOR SHELL (I) : 0.41400 REMARK 200 R SYM FOR SHELL (I) : 0.41400 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: PDB ENTRY 3GVP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M TRI-SODIUM CITRATE DEHYDRATE, REMARK 280 18% PEG 3350,0.1 M CHES, PH 8.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 93.12000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.30000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 93.12000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 34.30000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 22320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 65950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -130.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 38.57755 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -81.72215 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 87 REMARK 465 MET A 88 REMARK 465 VAL A 89 REMARK 465 SER A 90 REMARK 465 PRO A 91 REMARK 465 ARG A 92 REMARK 465 GLU A 93 REMARK 465 LYS A 94 REMARK 465 GLN A 95 REMARK 465 GLN A 96 REMARK 465 THR A 97 REMARK 465 ASN A 98 REMARK 465 SER A 99 REMARK 465 LYS A 100 REMARK 465 SER B 87 REMARK 465 MET B 88 REMARK 465 VAL B 89 REMARK 465 SER B 90 REMARK 465 PRO B 91 REMARK 465 ARG B 92 REMARK 465 GLU B 93 REMARK 465 LYS B 94 REMARK 465 GLN B 95 REMARK 465 GLN B 96 REMARK 465 THR B 97 REMARK 465 ASN B 98 REMARK 465 SER B 99 REMARK 465 LYS B 100 REMARK 465 ASP B 219 REMARK 465 GLY B 220 REMARK 465 TRP B 221 REMARK 465 LEU B 445 REMARK 465 SER B 446 REMARK 465 CYS B 447 REMARK 465 SER B 448 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 111 CG CD CE NZ REMARK 470 CYS A 166 SG REMARK 470 LYS A 267 CG CD CE NZ REMARK 470 LYS A 270 CG CD CE NZ REMARK 470 LYS A 478 CG CD CE NZ REMARK 470 LYS A 513 CG CD CE NZ REMARK 470 LYS A 519 CG CD CE NZ REMARK 470 LYS B 111 CG CD CE NZ REMARK 470 ARG B 136 CG CD NE CZ NH1 NH2 REMARK 470 CYS B 166 SG REMARK 470 LYS B 267 CG CD CE NZ REMARK 470 LYS B 270 CG CD CE NZ REMARK 470 LYS B 478 CG CD CE NZ REMARK 470 LYS B 513 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 105 156.45 176.06 REMARK 500 MET A 127 30.85 -98.71 REMARK 500 LYS A 141 74.09 22.89 REMARK 500 LYS A 267 -8.68 79.54 REMARK 500 CYS A 373 56.39 -146.75 REMARK 500 SER A 400 -129.73 34.75 REMARK 500 ASN A 401 24.12 -147.32 REMARK 500 ARG A 410 59.58 -103.73 REMARK 500 ALA A 438 27.99 49.33 REMARK 500 SER A 446 53.64 -148.70 REMARK 500 CYS A 447 -63.33 -145.68 REMARK 500 SER A 448 -157.91 -135.25 REMARK 500 LYS A 478 -160.04 -106.47 REMARK 500 ASN B 104 80.71 -69.56 REMARK 500 PHE B 105 166.24 179.27 REMARK 500 LYS B 108 34.81 -97.84 REMARK 500 LYS B 141 71.81 54.47 REMARK 500 LYS B 267 -38.94 70.51 REMARK 500 LYS B 270 -32.69 -150.28 REMARK 500 VAL B 282 -73.62 -46.78 REMARK 500 ARG B 294 -60.87 -101.59 REMARK 500 CYS B 373 58.17 -151.45 REMARK 500 SER B 391 -1.66 70.46 REMARK 500 SER B 400 -133.89 43.80 REMARK 500 ASN B 401 32.82 -150.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD B 1 DBREF 3MTG A 89 530 UNP O43865 SAHH2_HUMAN 89 530 DBREF 3MTG B 89 530 UNP O43865 SAHH2_HUMAN 89 530 SEQADV 3MTG SER A 87 UNP O43865 EXPRESSION TAG SEQADV 3MTG MET A 88 UNP O43865 EXPRESSION TAG SEQADV 3MTG ALA A 508 UNP O43865 THR 508 ENGINEERED MUTATION SEQADV 3MTG SER B 87 UNP O43865 EXPRESSION TAG SEQADV 3MTG MET B 88 UNP O43865 EXPRESSION TAG SEQADV 3MTG ALA B 508 UNP O43865 THR 508 ENGINEERED MUTATION SEQRES 1 A 444 SER MET VAL SER PRO ARG GLU LYS GLN GLN THR ASN SER SEQRES 2 A 444 LYS GLY SER SER ASN PHE CYS VAL LYS ASN ILE LYS GLN SEQRES 3 A 444 ALA GLU PHE GLY ARG ARG GLU ILE GLU ILE ALA GLU GLN SEQRES 4 A 444 ASP MET SER ALA LEU ILE SER LEU ARG LYS ARG ALA GLN SEQRES 5 A 444 GLY GLU LYS PRO LEU ALA GLY ALA LYS ILE VAL GLY CYS SEQRES 6 A 444 THR HIS ILE THR ALA GLN THR ALA VAL LEU ILE GLU THR SEQRES 7 A 444 LEU CYS ALA LEU GLY ALA GLN CYS ARG TRP SER ALA CYS SEQRES 8 A 444 ASN ILE TYR SER THR GLN ASN GLU VAL ALA ALA ALA LEU SEQRES 9 A 444 ALA GLU ALA GLY VAL ALA VAL PHE ALA TRP LYS GLY GLU SEQRES 10 A 444 SER GLU ASP ASP PHE TRP TRP CYS ILE ASP ARG CYS VAL SEQRES 11 A 444 ASN MET ASP GLY TRP GLN ALA ASN MET ILE LEU ASP ASP SEQRES 12 A 444 GLY GLY ASP LEU THR HIS TRP VAL TYR LYS LYS TYR PRO SEQRES 13 A 444 ASN VAL PHE LYS LYS ILE ARG GLY ILE VAL GLU GLU SER SEQRES 14 A 444 VAL THR GLY VAL HIS ARG LEU TYR GLN LEU SER LYS ALA SEQRES 15 A 444 GLY LYS LEU CYS VAL PRO ALA MET ASN VAL ASN ASP SER SEQRES 16 A 444 VAL THR LYS GLN LYS PHE ASP ASN LEU TYR CYS CYS ARG SEQRES 17 A 444 GLU SER ILE LEU ASP GLY LEU LYS ARG THR THR ASP VAL SEQRES 18 A 444 MET PHE GLY GLY LYS GLN VAL VAL VAL CYS GLY TYR GLY SEQRES 19 A 444 GLU VAL GLY LYS GLY CYS CYS ALA ALA LEU LYS ALA LEU SEQRES 20 A 444 GLY ALA ILE VAL TYR ILE THR GLU ILE ASP PRO ILE CYS SEQRES 21 A 444 ALA LEU GLN ALA CYS MET ASP GLY PHE ARG VAL VAL LYS SEQRES 22 A 444 LEU ASN GLU VAL ILE ARG GLN VAL ASP VAL VAL ILE THR SEQRES 23 A 444 CYS THR GLY ASN LYS ASN VAL VAL THR ARG GLU HIS LEU SEQRES 24 A 444 ASP ARG MET LYS ASN SER CYS ILE VAL CYS ASN MET GLY SEQRES 25 A 444 HIS SER ASN THR GLU ILE ASP VAL THR SER LEU ARG THR SEQRES 26 A 444 PRO GLU LEU THR TRP GLU ARG VAL ARG SER GLN VAL ASP SEQRES 27 A 444 HIS VAL ILE TRP PRO ASP GLY LYS ARG VAL VAL LEU LEU SEQRES 28 A 444 ALA GLU GLY ARG LEU LEU ASN LEU SER CYS SER THR VAL SEQRES 29 A 444 PRO THR PHE VAL LEU SER ILE THR ALA THR THR GLN ALA SEQRES 30 A 444 LEU ALA LEU ILE GLU LEU TYR ASN ALA PRO GLU GLY ARG SEQRES 31 A 444 TYR LYS GLN ASP VAL TYR LEU LEU PRO LYS LYS MET ASP SEQRES 32 A 444 GLU TYR VAL ALA SER LEU HIS LEU PRO SER PHE ASP ALA SEQRES 33 A 444 HIS LEU THR GLU LEU ALA ASP ASP GLN ALA LYS TYR LEU SEQRES 34 A 444 GLY LEU ASN LYS ASN GLY PRO PHE LYS PRO ASN TYR TYR SEQRES 35 A 444 ARG TYR SEQRES 1 B 444 SER MET VAL SER PRO ARG GLU LYS GLN GLN THR ASN SER SEQRES 2 B 444 LYS GLY SER SER ASN PHE CYS VAL LYS ASN ILE LYS GLN SEQRES 3 B 444 ALA GLU PHE GLY ARG ARG GLU ILE GLU ILE ALA GLU GLN SEQRES 4 B 444 ASP MET SER ALA LEU ILE SER LEU ARG LYS ARG ALA GLN SEQRES 5 B 444 GLY GLU LYS PRO LEU ALA GLY ALA LYS ILE VAL GLY CYS SEQRES 6 B 444 THR HIS ILE THR ALA GLN THR ALA VAL LEU ILE GLU THR SEQRES 7 B 444 LEU CYS ALA LEU GLY ALA GLN CYS ARG TRP SER ALA CYS SEQRES 8 B 444 ASN ILE TYR SER THR GLN ASN GLU VAL ALA ALA ALA LEU SEQRES 9 B 444 ALA GLU ALA GLY VAL ALA VAL PHE ALA TRP LYS GLY GLU SEQRES 10 B 444 SER GLU ASP ASP PHE TRP TRP CYS ILE ASP ARG CYS VAL SEQRES 11 B 444 ASN MET ASP GLY TRP GLN ALA ASN MET ILE LEU ASP ASP SEQRES 12 B 444 GLY GLY ASP LEU THR HIS TRP VAL TYR LYS LYS TYR PRO SEQRES 13 B 444 ASN VAL PHE LYS LYS ILE ARG GLY ILE VAL GLU GLU SER SEQRES 14 B 444 VAL THR GLY VAL HIS ARG LEU TYR GLN LEU SER LYS ALA SEQRES 15 B 444 GLY LYS LEU CYS VAL PRO ALA MET ASN VAL ASN ASP SER SEQRES 16 B 444 VAL THR LYS GLN LYS PHE ASP ASN LEU TYR CYS CYS ARG SEQRES 17 B 444 GLU SER ILE LEU ASP GLY LEU LYS ARG THR THR ASP VAL SEQRES 18 B 444 MET PHE GLY GLY LYS GLN VAL VAL VAL CYS GLY TYR GLY SEQRES 19 B 444 GLU VAL GLY LYS GLY CYS CYS ALA ALA LEU LYS ALA LEU SEQRES 20 B 444 GLY ALA ILE VAL TYR ILE THR GLU ILE ASP PRO ILE CYS SEQRES 21 B 444 ALA LEU GLN ALA CYS MET ASP GLY PHE ARG VAL VAL LYS SEQRES 22 B 444 LEU ASN GLU VAL ILE ARG GLN VAL ASP VAL VAL ILE THR SEQRES 23 B 444 CYS THR GLY ASN LYS ASN VAL VAL THR ARG GLU HIS LEU SEQRES 24 B 444 ASP ARG MET LYS ASN SER CYS ILE VAL CYS ASN MET GLY SEQRES 25 B 444 HIS SER ASN THR GLU ILE ASP VAL THR SER LEU ARG THR SEQRES 26 B 444 PRO GLU LEU THR TRP GLU ARG VAL ARG SER GLN VAL ASP SEQRES 27 B 444 HIS VAL ILE TRP PRO ASP GLY LYS ARG VAL VAL LEU LEU SEQRES 28 B 444 ALA GLU GLY ARG LEU LEU ASN LEU SER CYS SER THR VAL SEQRES 29 B 444 PRO THR PHE VAL LEU SER ILE THR ALA THR THR GLN ALA SEQRES 30 B 444 LEU ALA LEU ILE GLU LEU TYR ASN ALA PRO GLU GLY ARG SEQRES 31 B 444 TYR LYS GLN ASP VAL TYR LEU LEU PRO LYS LYS MET ASP SEQRES 32 B 444 GLU TYR VAL ALA SER LEU HIS LEU PRO SER PHE ASP ALA SEQRES 33 B 444 HIS LEU THR GLU LEU ALA ASP ASP GLN ALA LYS TYR LEU SEQRES 34 B 444 GLY LEU ASN LYS ASN GLY PRO PHE LYS PRO ASN TYR TYR SEQRES 35 B 444 ARG TYR HET NAD A 1 44 HET NAD B 1 44 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE FORMUL 3 NAD 2(C21 H27 N7 O14 P2) FORMUL 5 HOH *114(H2 O) HELIX 1 1 GLN A 112 GLN A 125 1 14 HELIX 2 2 MET A 127 GLN A 138 1 12 HELIX 3 3 THR A 155 LEU A 168 1 14 HELIX 4 4 GLN A 183 GLY A 194 1 12 HELIX 5 5 SER A 204 ASN A 217 1 14 HELIX 6 6 GLY A 231 TYR A 241 1 11 HELIX 7 7 TYR A 241 LYS A 246 1 6 HELIX 8 8 SER A 255 SER A 266 1 12 HELIX 9 9 SER A 281 ARG A 294 1 14 HELIX 10 10 LEU A 298 ASP A 306 1 9 HELIX 11 11 GLY A 320 GLY A 334 1 15 HELIX 12 12 ASP A 343 ASP A 353 1 11 HELIX 13 13 LYS A 359 VAL A 363 5 5 HELIX 14 14 THR A 381 MET A 388 1 8 HELIX 15 15 ASP A 405 ARG A 410 5 6 HELIX 16 16 GLU A 439 ARG A 441 5 3 HELIX 17 17 LEU A 443 CYS A 447 5 5 HELIX 18 18 PRO A 451 ALA A 472 1 22 HELIX 19 19 PRO A 485 LEU A 497 1 13 HELIX 20 20 PRO A 498 ASP A 501 5 4 HELIX 21 21 ALA A 508 LEU A 515 1 8 HELIX 22 22 GLN B 112 MET B 127 1 16 HELIX 23 23 MET B 127 GLN B 138 1 12 HELIX 24 24 THR B 155 CYS B 166 1 12 HELIX 25 25 ALA B 167 GLY B 169 5 3 HELIX 26 26 GLN B 183 GLY B 194 1 12 HELIX 27 27 SER B 204 ASN B 217 1 14 HELIX 28 28 GLY B 231 LYS B 240 1 10 HELIX 29 29 TYR B 241 LYS B 247 1 7 HELIX 30 30 SER B 255 SER B 266 1 12 HELIX 31 31 SER B 281 ARG B 294 1 14 HELIX 32 32 LEU B 298 ASP B 306 1 9 HELIX 33 33 GLY B 320 LEU B 333 1 14 HELIX 34 34 ASP B 343 ASP B 353 1 11 HELIX 35 35 LYS B 359 VAL B 363 5 5 HELIX 36 36 THR B 381 MET B 388 1 8 HELIX 37 37 ASP B 405 ARG B 410 5 6 HELIX 38 38 GLU B 439 ARG B 441 5 3 HELIX 39 39 PRO B 451 ASN B 471 1 21 HELIX 40 40 PRO B 485 LEU B 495 1 11 HELIX 41 41 HIS B 496 ASP B 501 5 6 HELIX 42 42 ALA B 508 LEU B 515 1 8 SHEET 1 A 7 ALA A 196 VAL A 197 0 SHEET 2 A 7 GLN A 171 SER A 175 1 N TRP A 174 O ALA A 196 SHEET 3 A 7 LYS A 147 CYS A 151 1 N ILE A 148 O GLN A 171 SHEET 4 A 7 MET A 225 ASP A 228 1 O MET A 225 N VAL A 149 SHEET 5 A 7 GLY A 250 GLU A 253 1 O VAL A 252 N ILE A 226 SHEET 6 A 7 ALA A 275 ASN A 277 1 O MET A 276 N ILE A 251 SHEET 7 A 7 VAL A 481 TYR A 482 1 O TYR A 482 N ALA A 275 SHEET 1 B 8 ARG A 356 VAL A 357 0 SHEET 2 B 8 ILE A 336 THR A 340 1 N ILE A 339 O ARG A 356 SHEET 3 B 8 GLN A 313 CYS A 317 1 N VAL A 314 O ILE A 336 SHEET 4 B 8 VAL A 369 THR A 372 1 O ILE A 371 N CYS A 317 SHEET 5 B 8 CYS A 392 ASN A 396 1 O ILE A 393 N VAL A 370 SHEET 6 B 8 ARG A 433 LEU A 437 1 O VAL A 435 N VAL A 394 SHEET 7 B 8 VAL A 423 ILE A 427 -1 N ASP A 424 O LEU A 436 SHEET 8 B 8 THR A 415 ARG A 420 -1 N THR A 415 O ILE A 427 SHEET 1 C 7 ALA B 196 PHE B 198 0 SHEET 2 C 7 GLN B 171 SER B 175 1 N TRP B 174 O ALA B 196 SHEET 3 C 7 LYS B 147 CYS B 151 1 N GLY B 150 O ARG B 173 SHEET 4 C 7 MET B 225 ASP B 228 1 O LEU B 227 N CYS B 151 SHEET 5 C 7 GLY B 250 GLU B 253 1 O VAL B 252 N ASP B 228 SHEET 6 C 7 ALA B 275 ASN B 277 1 O MET B 276 N ILE B 251 SHEET 7 C 7 VAL B 481 LEU B 483 1 O TYR B 482 N ASN B 277 SHEET 1 D 8 ARG B 356 VAL B 357 0 SHEET 2 D 8 ILE B 336 THR B 340 1 N ILE B 339 O ARG B 356 SHEET 3 D 8 GLN B 313 CYS B 317 1 N VAL B 314 O ILE B 336 SHEET 4 D 8 VAL B 369 THR B 372 1 O ILE B 371 N CYS B 317 SHEET 5 D 8 ILE B 393 ASN B 396 1 O ILE B 393 N VAL B 370 SHEET 6 D 8 ARG B 433 LEU B 437 1 O VAL B 435 N VAL B 394 SHEET 7 D 8 VAL B 423 ILE B 427 -1 N ASP B 424 O LEU B 436 SHEET 8 D 8 THR B 415 ARG B 420 -1 N GLU B 417 O HIS B 425 SITE 1 AC1 23 VAL A 256 CYS A 292 GLY A 318 GLY A 320 SITE 2 AC1 23 GLU A 321 VAL A 322 THR A 340 GLU A 341 SITE 3 AC1 23 ILE A 342 ASP A 343 CYS A 346 CYS A 373 SITE 4 AC1 23 THR A 374 GLY A 375 ASN A 376 VAL A 379 SITE 5 AC1 23 MET A 397 GLY A 398 HIS A 399 ASN A 444 SITE 6 AC1 23 GLN B 511 LYS B 524 TYR B 528 SITE 1 AC2 21 GLN A 511 LYS A 524 TYR A 528 CYS B 292 SITE 2 AC2 21 GLY B 318 GLY B 320 GLU B 321 VAL B 322 SITE 3 AC2 21 THR B 340 GLU B 341 ILE B 342 ASP B 343 SITE 4 AC2 21 CYS B 346 CYS B 373 THR B 374 GLY B 375 SITE 5 AC2 21 ASN B 376 VAL B 379 MET B 397 GLY B 398 SITE 6 AC2 21 HIS B 399 CRYST1 186.240 68.600 90.370 90.00 115.27 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005369 0.000000 0.002535 0.00000 SCALE2 0.000000 0.014577 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012237 0.00000