data_3MTK # _entry.id 3MTK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.312 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3MTK RCSB RCSB058977 WWPDB D_1000058977 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id ClR27C _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3MTK _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-04-30 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kuzin, A.' 1 'Abashidze, M.' 2 'Seetharaman, J.' 3 'Sahdev, S.' 4 'Xiao, R.' 5 'Ciccosanti, C.' 6 'Wang, D.' 7 'Everett, J.K.' 8 'Nair, R.' 9 'Acton, T.B.' 10 'Rost, B.' 11 'Montelione, G.T.' 12 'Tong, L.' 13 'Hunt, J.F.' 14 'Northeast Structural Genomics Consortium (NESG)' 15 # _citation.id primary _citation.title 'Northeast Structural Genomics Consortium Target ClR27C' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kuzin, A.' 1 ? primary 'Abashidze, M.' 2 ? primary 'Seetharaman, J.' 3 ? primary 'Sahdev, S.' 4 ? primary 'Xiao, R.' 5 ? primary 'Ciccosanti, C.' 6 ? primary 'Wang, D.' 7 ? primary 'Everett, J.K.' 8 ? primary 'Nair, R.' 9 ? primary 'Acton, T.B.' 10 ? primary 'Rost, B.' 11 ? primary 'Montelione, G.T.' 12 ? primary 'Tong, L.' 13 ? primary 'Hunt, J.F.' 14 ? # _cell.entry_id 3MTK _cell.length_a 51.546 _cell.length_b 60.946 _cell.length_c 56.173 _cell.angle_alpha 90.00 _cell.angle_beta 94.95 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MTK _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Diguanylate cyclase/phosphodiesterase' 20715.357 2 ? ? ? ? 2 water nat water 18.015 38 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SKLEFLAFYDELTGLPNKNSLIRWLNLKVSQ(MSE)DCIDTYLIFLEVRDLEKLNVTYGYDLVDELIIHISKRIKDIAGE GNKAFKIGFDRFAIICKSENISDFIER(MSE)LSQLLLPYNVNGNLIRVNFNIGAAQIENSNEAAANL(MSE)RRCDLAL IKAKEEGLNEYVIFKPSIEIQTLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;SKLEFLAFYDELTGLPNKNSLIRWLNLKVSQMDCIDTYLIFLEVRDLEKLNVTYGYDLVDELIIHISKRIKDIAGEGNKA FKIGFDRFAIICKSENISDFIERMLSQLLLPYNVNGNLIRVNFNIGAAQIENSNEAAANLMRRCDLALIKAKEEGLNEYV IFKPSIEIQTLEHHHHHH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ClR27C # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 LYS n 1 3 LEU n 1 4 GLU n 1 5 PHE n 1 6 LEU n 1 7 ALA n 1 8 PHE n 1 9 TYR n 1 10 ASP n 1 11 GLU n 1 12 LEU n 1 13 THR n 1 14 GLY n 1 15 LEU n 1 16 PRO n 1 17 ASN n 1 18 LYS n 1 19 ASN n 1 20 SER n 1 21 LEU n 1 22 ILE n 1 23 ARG n 1 24 TRP n 1 25 LEU n 1 26 ASN n 1 27 LEU n 1 28 LYS n 1 29 VAL n 1 30 SER n 1 31 GLN n 1 32 MSE n 1 33 ASP n 1 34 CYS n 1 35 ILE n 1 36 ASP n 1 37 THR n 1 38 TYR n 1 39 LEU n 1 40 ILE n 1 41 PHE n 1 42 LEU n 1 43 GLU n 1 44 VAL n 1 45 ARG n 1 46 ASP n 1 47 LEU n 1 48 GLU n 1 49 LYS n 1 50 LEU n 1 51 ASN n 1 52 VAL n 1 53 THR n 1 54 TYR n 1 55 GLY n 1 56 TYR n 1 57 ASP n 1 58 LEU n 1 59 VAL n 1 60 ASP n 1 61 GLU n 1 62 LEU n 1 63 ILE n 1 64 ILE n 1 65 HIS n 1 66 ILE n 1 67 SER n 1 68 LYS n 1 69 ARG n 1 70 ILE n 1 71 LYS n 1 72 ASP n 1 73 ILE n 1 74 ALA n 1 75 GLY n 1 76 GLU n 1 77 GLY n 1 78 ASN n 1 79 LYS n 1 80 ALA n 1 81 PHE n 1 82 LYS n 1 83 ILE n 1 84 GLY n 1 85 PHE n 1 86 ASP n 1 87 ARG n 1 88 PHE n 1 89 ALA n 1 90 ILE n 1 91 ILE n 1 92 CYS n 1 93 LYS n 1 94 SER n 1 95 GLU n 1 96 ASN n 1 97 ILE n 1 98 SER n 1 99 ASP n 1 100 PHE n 1 101 ILE n 1 102 GLU n 1 103 ARG n 1 104 MSE n 1 105 LEU n 1 106 SER n 1 107 GLN n 1 108 LEU n 1 109 LEU n 1 110 LEU n 1 111 PRO n 1 112 TYR n 1 113 ASN n 1 114 VAL n 1 115 ASN n 1 116 GLY n 1 117 ASN n 1 118 LEU n 1 119 ILE n 1 120 ARG n 1 121 VAL n 1 122 ASN n 1 123 PHE n 1 124 ASN n 1 125 ILE n 1 126 GLY n 1 127 ALA n 1 128 ALA n 1 129 GLN n 1 130 ILE n 1 131 GLU n 1 132 ASN n 1 133 SER n 1 134 ASN n 1 135 GLU n 1 136 ALA n 1 137 ALA n 1 138 ALA n 1 139 ASN n 1 140 LEU n 1 141 MSE n 1 142 ARG n 1 143 ARG n 1 144 CYS n 1 145 ASP n 1 146 LEU n 1 147 ALA n 1 148 LEU n 1 149 ILE n 1 150 LYS n 1 151 ALA n 1 152 LYS n 1 153 GLU n 1 154 GLU n 1 155 GLY n 1 156 LEU n 1 157 ASN n 1 158 GLU n 1 159 TYR n 1 160 VAL n 1 161 ILE n 1 162 PHE n 1 163 LYS n 1 164 PRO n 1 165 SER n 1 166 ILE n 1 167 GLU n 1 168 ILE n 1 169 GLN n 1 170 THR n 1 171 LEU n 1 172 GLU n 1 173 HIS n 1 174 HIS n 1 175 HIS n 1 176 HIS n 1 177 HIS n 1 178 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Csac_0821 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 43494 / DSM 8903' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Caldicellulosiruptor saccharolyticus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 351627 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)+ Magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET 21-23C' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A4XHQ4_CALS8 _struct_ref.pdbx_db_accession A4XHQ4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SKLEFLAFYDELTGLPNKNSLIRWLNLKVSQMDCIDTYLIFLEVRDLEKLNVTYGYDLVDELIIHISKRIKDIAGEGNKA FKIGFDRFAIICKSENISDFIERMLSQLLLPYNVNGNLIRVNFNIGAAQIENSNEAAANLMRRCDLALIKAKEEGLNEYV IFKPSIEIQTL ; _struct_ref.pdbx_align_begin 185 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3MTK A 1 ? 171 ? A4XHQ4 185 ? 355 ? 185 355 2 1 3MTK B 1 ? 171 ? A4XHQ4 185 ? 355 ? 185 355 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3MTK GLU A 172 ? UNP A4XHQ4 ? ? 'expression tag' 356 1 1 3MTK HIS A 173 ? UNP A4XHQ4 ? ? 'expression tag' 357 2 1 3MTK HIS A 174 ? UNP A4XHQ4 ? ? 'expression tag' 358 3 1 3MTK HIS A 175 ? UNP A4XHQ4 ? ? 'expression tag' 359 4 1 3MTK HIS A 176 ? UNP A4XHQ4 ? ? 'expression tag' 360 5 1 3MTK HIS A 177 ? UNP A4XHQ4 ? ? 'expression tag' 361 6 1 3MTK HIS A 178 ? UNP A4XHQ4 ? ? 'expression tag' 362 7 2 3MTK GLU B 172 ? UNP A4XHQ4 ? ? 'expression tag' 356 8 2 3MTK HIS B 173 ? UNP A4XHQ4 ? ? 'expression tag' 357 9 2 3MTK HIS B 174 ? UNP A4XHQ4 ? ? 'expression tag' 358 10 2 3MTK HIS B 175 ? UNP A4XHQ4 ? ? 'expression tag' 359 11 2 3MTK HIS B 176 ? UNP A4XHQ4 ? ? 'expression tag' 360 12 2 3MTK HIS B 177 ? UNP A4XHQ4 ? ? 'expression tag' 361 13 2 3MTK HIS B 178 ? UNP A4XHQ4 ? ? 'expression tag' 362 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3MTK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.12 _exptl_crystal.density_percent_sol 42.03 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'Protein solution: 100mM NaCl, 5mM DTT, 0.02% NaN3, 10mM Tris-HCl pH 7.5. Reservoir solution:, VAPOR DIFFUSION, HANGING DROP' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2010-04-09 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97910 1.0 2 0.97924 1.0 3 0.96791 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.97910, 0.97924, 0.96791' # _reflns.entry_id 3MTK _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 2.240 _reflns.number_obs 32644 _reflns.number_all ? _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.05800 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 32.3000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.700 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.24 _reflns_shell.d_res_low 2.32 _reflns_shell.percent_possible_all 96.8 _reflns_shell.Rmerge_I_obs 0.33700 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 7.300 _reflns_shell.pdbx_redundancy 3.20 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3MTK _refine.ls_number_reflns_obs 22908 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 2.24 _refine.ls_percent_reflns_obs 97.3 _refine.ls_R_factor_obs 0.235 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.235 _refine.ls_R_factor_R_free 0.270 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.700 _refine.ls_number_reflns_R_free 1108 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 51.72 _refine.aniso_B[1][1] -13.51100 _refine.aniso_B[2][2] 6.50400 _refine.aniso_B[3][3] 7.00700 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 1.63100 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol 63.57 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2632 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 38 _refine_hist.number_atoms_total 2670 _refine_hist.d_res_high 2.24 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.291 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 CNS_TOPPAR:PROTEIN_REP.PARAM ? 'X-RAY DIFFRACTION' 2 CNS_TOPPAR:WATER.PARAM ? # _struct.entry_id 3MTK _struct.title ;X-Ray Structure of Diguanylate cyclase/phosphodiesterase from Caldicellulosiruptor saccharolyticus, Northeast Structural Genomics Consortium Target ClR27C ; _struct.pdbx_descriptor 'Diguanylate cyclase/phosphodiesterase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3MTK _struct_keywords.text 'Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, TRANSFERASE' _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details 'monomer,24.24 kD,97.6%' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 2 ? TYR A 9 ? LYS A 186 TYR A 193 1 ? 8 HELX_P HELX_P2 2 ASN A 17 ? GLN A 31 ? ASN A 201 GLN A 215 1 ? 15 HELX_P HELX_P3 3 ASP A 46 ? GLY A 55 ? ASP A 230 GLY A 239 1 ? 10 HELX_P HELX_P4 4 GLY A 55 ? GLY A 75 ? GLY A 239 GLY A 259 1 ? 21 HELX_P HELX_P5 5 ASN A 96 ? LEU A 109 ? ASN A 280 LEU A 293 1 ? 14 HELX_P HELX_P6 6 ALA A 136 ? GLY A 155 ? ALA A 320 GLY A 339 1 ? 20 HELX_P HELX_P7 7 LYS B 2 ? TYR B 9 ? LYS B 186 TYR B 193 1 ? 8 HELX_P HELX_P8 8 ASN B 17 ? VAL B 29 ? ASN B 201 VAL B 213 1 ? 13 HELX_P HELX_P9 9 ASP B 46 ? GLY B 55 ? ASP B 230 GLY B 239 1 ? 10 HELX_P HELX_P10 10 GLY B 55 ? GLY B 75 ? GLY B 239 GLY B 259 1 ? 21 HELX_P HELX_P11 11 ASN B 96 ? LEU B 110 ? ASN B 280 LEU B 294 1 ? 15 HELX_P HELX_P12 12 ALA B 136 ? GLY B 155 ? ALA B 320 GLY B 339 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A GLN 31 C ? ? ? 1_555 A MSE 32 N ? ? A GLN 215 A MSE 216 1_555 ? ? ? ? ? ? ? 1.331 ? covale2 covale both ? A MSE 32 C ? ? ? 1_555 A ASP 33 N ? ? A MSE 216 A ASP 217 1_555 ? ? ? ? ? ? ? 1.330 ? covale3 covale both ? A ARG 103 C ? ? ? 1_555 A MSE 104 N ? ? A ARG 287 A MSE 288 1_555 ? ? ? ? ? ? ? 1.328 ? covale4 covale both ? A MSE 104 C ? ? ? 1_555 A LEU 105 N ? ? A MSE 288 A LEU 289 1_555 ? ? ? ? ? ? ? 1.327 ? covale5 covale both ? A LEU 140 C ? ? ? 1_555 A MSE 141 N ? ? A LEU 324 A MSE 325 1_555 ? ? ? ? ? ? ? 1.325 ? covale6 covale both ? A MSE 141 C ? ? ? 1_555 A ARG 142 N ? ? A MSE 325 A ARG 326 1_555 ? ? ? ? ? ? ? 1.327 ? covale7 covale both ? B ARG 103 C ? ? ? 1_555 B MSE 104 N ? ? B ARG 287 B MSE 288 1_555 ? ? ? ? ? ? ? 1.329 ? covale8 covale both ? B MSE 104 C ? ? ? 1_555 B LEU 105 N ? ? B MSE 288 B LEU 289 1_555 ? ? ? ? ? ? ? 1.328 ? covale9 covale both ? B LEU 140 C ? ? ? 1_555 B MSE 141 N ? ? B LEU 324 B MSE 325 1_555 ? ? ? ? ? ? ? 1.324 ? covale10 covale both ? B MSE 141 C ? ? ? 1_555 B ARG 142 N ? ? B MSE 325 B ARG 326 1_555 ? ? ? ? ? ? ? 1.328 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? C ? 6 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? parallel C 5 6 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 79 ? GLY A 84 ? LYS A 263 GLY A 268 A 2 ARG A 87 ? LYS A 93 ? ARG A 271 LYS A 277 A 3 THR A 37 ? VAL A 44 ? THR A 221 VAL A 228 A 4 PHE A 123 ? GLN A 129 ? PHE A 307 GLN A 313 A 5 TYR A 159 ? LYS A 163 ? TYR A 343 LYS A 347 A 6 GLU A 167 ? GLN A 169 ? GLU A 351 GLN A 353 B 1 TYR A 112 ? VAL A 114 ? TYR A 296 VAL A 298 B 2 ASN A 117 ? ILE A 119 ? ASN A 301 ILE A 303 C 1 ALA B 80 ? LYS B 82 ? ALA B 264 LYS B 266 C 2 ARG B 87 ? LYS B 93 ? ARG B 271 LYS B 277 C 3 THR B 37 ? VAL B 44 ? THR B 221 VAL B 228 C 4 PHE B 123 ? GLN B 129 ? PHE B 307 GLN B 313 C 5 TYR B 159 ? LYS B 163 ? TYR B 343 LYS B 347 C 6 GLU B 167 ? GLN B 169 ? GLU B 351 GLN B 353 D 1 TYR B 112 ? VAL B 114 ? TYR B 296 VAL B 298 D 2 ASN B 117 ? ILE B 119 ? ASN B 301 ILE B 303 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 81 ? N PHE A 265 O ALA A 89 ? O ALA A 273 A 2 3 O CYS A 92 ? O CYS A 276 N TYR A 38 ? N TYR A 222 A 3 4 N PHE A 41 ? N PHE A 225 O GLY A 126 ? O GLY A 310 A 4 5 N ALA A 127 ? N ALA A 311 O PHE A 162 ? O PHE A 346 A 5 6 N LYS A 163 ? N LYS A 347 O GLU A 167 ? O GLU A 351 B 1 2 N TYR A 112 ? N TYR A 296 O ILE A 119 ? O ILE A 303 C 1 2 N PHE B 81 ? N PHE B 265 O ALA B 89 ? O ALA B 273 C 2 3 O ILE B 90 ? O ILE B 274 N ILE B 40 ? N ILE B 224 C 3 4 N PHE B 41 ? N PHE B 225 O GLY B 126 ? O GLY B 310 C 4 5 N ALA B 127 ? N ALA B 311 O VAL B 160 ? O VAL B 344 C 5 6 N ILE B 161 ? N ILE B 345 O GLN B 169 ? O GLN B 353 D 1 2 N TYR B 112 ? N TYR B 296 O ILE B 119 ? O ILE B 303 # _atom_sites.entry_id 3MTK _atom_sites.fract_transf_matrix[1][1] 0.019400 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001680 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016408 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017869 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 185 ? ? ? A . n A 1 2 LYS 2 186 186 LYS LYS A . n A 1 3 LEU 3 187 187 LEU LEU A . n A 1 4 GLU 4 188 188 GLU GLU A . n A 1 5 PHE 5 189 189 PHE PHE A . n A 1 6 LEU 6 190 190 LEU LEU A . n A 1 7 ALA 7 191 191 ALA ALA A . n A 1 8 PHE 8 192 192 PHE PHE A . n A 1 9 TYR 9 193 193 TYR TYR A . n A 1 10 ASP 10 194 194 ASP ASP A . n A 1 11 GLU 11 195 195 GLU GLU A . n A 1 12 LEU 12 196 196 LEU LEU A . n A 1 13 THR 13 197 197 THR THR A . n A 1 14 GLY 14 198 198 GLY GLY A . n A 1 15 LEU 15 199 199 LEU LEU A . n A 1 16 PRO 16 200 200 PRO PRO A . n A 1 17 ASN 17 201 201 ASN ASN A . n A 1 18 LYS 18 202 202 LYS LYS A . n A 1 19 ASN 19 203 203 ASN ASN A . n A 1 20 SER 20 204 204 SER SER A . n A 1 21 LEU 21 205 205 LEU LEU A . n A 1 22 ILE 22 206 206 ILE ILE A . n A 1 23 ARG 23 207 207 ARG ARG A . n A 1 24 TRP 24 208 208 TRP TRP A . n A 1 25 LEU 25 209 209 LEU LEU A . n A 1 26 ASN 26 210 210 ASN ASN A . n A 1 27 LEU 27 211 211 LEU LEU A . n A 1 28 LYS 28 212 212 LYS LYS A . n A 1 29 VAL 29 213 213 VAL VAL A . n A 1 30 SER 30 214 214 SER SER A . n A 1 31 GLN 31 215 215 GLN GLN A . n A 1 32 MSE 32 216 216 MSE MSE A . n A 1 33 ASP 33 217 217 ASP ASP A . n A 1 34 CYS 34 218 218 CYS CYS A . n A 1 35 ILE 35 219 219 ILE ILE A . n A 1 36 ASP 36 220 220 ASP ASP A . n A 1 37 THR 37 221 221 THR THR A . n A 1 38 TYR 38 222 222 TYR TYR A . n A 1 39 LEU 39 223 223 LEU LEU A . n A 1 40 ILE 40 224 224 ILE ILE A . n A 1 41 PHE 41 225 225 PHE PHE A . n A 1 42 LEU 42 226 226 LEU LEU A . n A 1 43 GLU 43 227 227 GLU GLU A . n A 1 44 VAL 44 228 228 VAL VAL A . n A 1 45 ARG 45 229 229 ARG ARG A . n A 1 46 ASP 46 230 230 ASP ASP A . n A 1 47 LEU 47 231 231 LEU LEU A . n A 1 48 GLU 48 232 232 GLU GLU A . n A 1 49 LYS 49 233 233 LYS LYS A . n A 1 50 LEU 50 234 234 LEU LEU A . n A 1 51 ASN 51 235 235 ASN ASN A . n A 1 52 VAL 52 236 236 VAL VAL A . n A 1 53 THR 53 237 237 THR THR A . n A 1 54 TYR 54 238 238 TYR TYR A . n A 1 55 GLY 55 239 239 GLY GLY A . n A 1 56 TYR 56 240 240 TYR TYR A . n A 1 57 ASP 57 241 241 ASP ASP A . n A 1 58 LEU 58 242 242 LEU LEU A . n A 1 59 VAL 59 243 243 VAL VAL A . n A 1 60 ASP 60 244 244 ASP ASP A . n A 1 61 GLU 61 245 245 GLU GLU A . n A 1 62 LEU 62 246 246 LEU LEU A . n A 1 63 ILE 63 247 247 ILE ILE A . n A 1 64 ILE 64 248 248 ILE ILE A . n A 1 65 HIS 65 249 249 HIS HIS A . n A 1 66 ILE 66 250 250 ILE ILE A . n A 1 67 SER 67 251 251 SER SER A . n A 1 68 LYS 68 252 252 LYS LYS A . n A 1 69 ARG 69 253 253 ARG ARG A . n A 1 70 ILE 70 254 254 ILE ILE A . n A 1 71 LYS 71 255 255 LYS LYS A . n A 1 72 ASP 72 256 256 ASP ASP A . n A 1 73 ILE 73 257 257 ILE ILE A . n A 1 74 ALA 74 258 258 ALA ALA A . n A 1 75 GLY 75 259 259 GLY GLY A . n A 1 76 GLU 76 260 260 GLU GLU A . n A 1 77 GLY 77 261 261 GLY GLY A . n A 1 78 ASN 78 262 262 ASN ASN A . n A 1 79 LYS 79 263 263 LYS LYS A . n A 1 80 ALA 80 264 264 ALA ALA A . n A 1 81 PHE 81 265 265 PHE PHE A . n A 1 82 LYS 82 266 266 LYS LYS A . n A 1 83 ILE 83 267 267 ILE ILE A . n A 1 84 GLY 84 268 268 GLY GLY A . n A 1 85 PHE 85 269 269 PHE PHE A . n A 1 86 ASP 86 270 270 ASP ASP A . n A 1 87 ARG 87 271 271 ARG ARG A . n A 1 88 PHE 88 272 272 PHE PHE A . n A 1 89 ALA 89 273 273 ALA ALA A . n A 1 90 ILE 90 274 274 ILE ILE A . n A 1 91 ILE 91 275 275 ILE ILE A . n A 1 92 CYS 92 276 276 CYS CYS A . n A 1 93 LYS 93 277 277 LYS LYS A . n A 1 94 SER 94 278 278 SER SER A . n A 1 95 GLU 95 279 279 GLU GLU A . n A 1 96 ASN 96 280 280 ASN ASN A . n A 1 97 ILE 97 281 281 ILE ILE A . n A 1 98 SER 98 282 282 SER SER A . n A 1 99 ASP 99 283 283 ASP ASP A . n A 1 100 PHE 100 284 284 PHE PHE A . n A 1 101 ILE 101 285 285 ILE ILE A . n A 1 102 GLU 102 286 286 GLU GLU A . n A 1 103 ARG 103 287 287 ARG ARG A . n A 1 104 MSE 104 288 288 MSE MSE A . n A 1 105 LEU 105 289 289 LEU LEU A . n A 1 106 SER 106 290 290 SER SER A . n A 1 107 GLN 107 291 291 GLN GLN A . n A 1 108 LEU 108 292 292 LEU LEU A . n A 1 109 LEU 109 293 293 LEU LEU A . n A 1 110 LEU 110 294 294 LEU LEU A . n A 1 111 PRO 111 295 295 PRO PRO A . n A 1 112 TYR 112 296 296 TYR TYR A . n A 1 113 ASN 113 297 297 ASN ASN A . n A 1 114 VAL 114 298 298 VAL VAL A . n A 1 115 ASN 115 299 299 ASN ASN A . n A 1 116 GLY 116 300 300 GLY GLY A . n A 1 117 ASN 117 301 301 ASN ASN A . n A 1 118 LEU 118 302 302 LEU LEU A . n A 1 119 ILE 119 303 303 ILE ILE A . n A 1 120 ARG 120 304 304 ARG ARG A . n A 1 121 VAL 121 305 305 VAL VAL A . n A 1 122 ASN 122 306 306 ASN ASN A . n A 1 123 PHE 123 307 307 PHE PHE A . n A 1 124 ASN 124 308 308 ASN ASN A . n A 1 125 ILE 125 309 309 ILE ILE A . n A 1 126 GLY 126 310 310 GLY GLY A . n A 1 127 ALA 127 311 311 ALA ALA A . n A 1 128 ALA 128 312 312 ALA ALA A . n A 1 129 GLN 129 313 313 GLN GLN A . n A 1 130 ILE 130 314 314 ILE ILE A . n A 1 131 GLU 131 315 315 GLU GLU A . n A 1 132 ASN 132 316 ? ? ? A . n A 1 133 SER 133 317 ? ? ? A . n A 1 134 ASN 134 318 ? ? ? A . n A 1 135 GLU 135 319 ? ? ? A . n A 1 136 ALA 136 320 320 ALA ALA A . n A 1 137 ALA 137 321 321 ALA ALA A . n A 1 138 ALA 138 322 322 ALA ALA A . n A 1 139 ASN 139 323 323 ASN ASN A . n A 1 140 LEU 140 324 324 LEU LEU A . n A 1 141 MSE 141 325 325 MSE MSE A . n A 1 142 ARG 142 326 326 ARG ARG A . n A 1 143 ARG 143 327 327 ARG ARG A . n A 1 144 CYS 144 328 328 CYS CYS A . n A 1 145 ASP 145 329 329 ASP ASP A . n A 1 146 LEU 146 330 330 LEU LEU A . n A 1 147 ALA 147 331 331 ALA ALA A . n A 1 148 LEU 148 332 332 LEU LEU A . n A 1 149 ILE 149 333 333 ILE ILE A . n A 1 150 LYS 150 334 334 LYS LYS A . n A 1 151 ALA 151 335 335 ALA ALA A . n A 1 152 LYS 152 336 336 LYS LYS A . n A 1 153 GLU 153 337 337 GLU GLU A . n A 1 154 GLU 154 338 338 GLU GLU A . n A 1 155 GLY 155 339 339 GLY GLY A . n A 1 156 LEU 156 340 340 LEU LEU A . n A 1 157 ASN 157 341 341 ASN ASN A . n A 1 158 GLU 158 342 342 GLU GLU A . n A 1 159 TYR 159 343 343 TYR TYR A . n A 1 160 VAL 160 344 344 VAL VAL A . n A 1 161 ILE 161 345 345 ILE ILE A . n A 1 162 PHE 162 346 346 PHE PHE A . n A 1 163 LYS 163 347 347 LYS LYS A . n A 1 164 PRO 164 348 348 PRO PRO A . n A 1 165 SER 165 349 ? ? ? A . n A 1 166 ILE 166 350 350 ILE ILE A . n A 1 167 GLU 167 351 351 GLU GLU A . n A 1 168 ILE 168 352 352 ILE ILE A . n A 1 169 GLN 169 353 353 GLN GLN A . n A 1 170 THR 170 354 ? ? ? A . n A 1 171 LEU 171 355 ? ? ? A . n A 1 172 GLU 172 356 ? ? ? A . n A 1 173 HIS 173 357 ? ? ? A . n A 1 174 HIS 174 358 ? ? ? A . n A 1 175 HIS 175 359 ? ? ? A . n A 1 176 HIS 176 360 ? ? ? A . n A 1 177 HIS 177 361 ? ? ? A . n A 1 178 HIS 178 362 ? ? ? A . n B 1 1 SER 1 185 ? ? ? B . n B 1 2 LYS 2 186 186 LYS LYS B . n B 1 3 LEU 3 187 187 LEU LEU B . n B 1 4 GLU 4 188 188 GLU GLU B . n B 1 5 PHE 5 189 189 PHE PHE B . n B 1 6 LEU 6 190 190 LEU LEU B . n B 1 7 ALA 7 191 191 ALA ALA B . n B 1 8 PHE 8 192 192 PHE PHE B . n B 1 9 TYR 9 193 193 TYR TYR B . n B 1 10 ASP 10 194 194 ASP ASP B . n B 1 11 GLU 11 195 195 GLU GLU B . n B 1 12 LEU 12 196 196 LEU LEU B . n B 1 13 THR 13 197 197 THR THR B . n B 1 14 GLY 14 198 198 GLY GLY B . n B 1 15 LEU 15 199 199 LEU LEU B . n B 1 16 PRO 16 200 200 PRO PRO B . n B 1 17 ASN 17 201 201 ASN ASN B . n B 1 18 LYS 18 202 202 LYS LYS B . n B 1 19 ASN 19 203 203 ASN ASN B . n B 1 20 SER 20 204 204 SER SER B . n B 1 21 LEU 21 205 205 LEU LEU B . n B 1 22 ILE 22 206 206 ILE ILE B . n B 1 23 ARG 23 207 207 ARG ARG B . n B 1 24 TRP 24 208 208 TRP TRP B . n B 1 25 LEU 25 209 209 LEU LEU B . n B 1 26 ASN 26 210 210 ASN ASN B . n B 1 27 LEU 27 211 211 LEU LEU B . n B 1 28 LYS 28 212 212 LYS LYS B . n B 1 29 VAL 29 213 213 VAL VAL B . n B 1 30 SER 30 214 214 SER SER B . n B 1 31 GLN 31 215 215 GLN GLN B . n B 1 32 MSE 32 216 ? ? ? B . n B 1 33 ASP 33 217 217 ASP ASP B . n B 1 34 CYS 34 218 218 CYS CYS B . n B 1 35 ILE 35 219 219 ILE ILE B . n B 1 36 ASP 36 220 220 ASP ASP B . n B 1 37 THR 37 221 221 THR THR B . n B 1 38 TYR 38 222 222 TYR TYR B . n B 1 39 LEU 39 223 223 LEU LEU B . n B 1 40 ILE 40 224 224 ILE ILE B . n B 1 41 PHE 41 225 225 PHE PHE B . n B 1 42 LEU 42 226 226 LEU LEU B . n B 1 43 GLU 43 227 227 GLU GLU B . n B 1 44 VAL 44 228 228 VAL VAL B . n B 1 45 ARG 45 229 229 ARG ARG B . n B 1 46 ASP 46 230 230 ASP ASP B . n B 1 47 LEU 47 231 231 LEU LEU B . n B 1 48 GLU 48 232 232 GLU GLU B . n B 1 49 LYS 49 233 233 LYS LYS B . n B 1 50 LEU 50 234 234 LEU LEU B . n B 1 51 ASN 51 235 235 ASN ASN B . n B 1 52 VAL 52 236 236 VAL VAL B . n B 1 53 THR 53 237 237 THR THR B . n B 1 54 TYR 54 238 238 TYR TYR B . n B 1 55 GLY 55 239 239 GLY GLY B . n B 1 56 TYR 56 240 240 TYR TYR B . n B 1 57 ASP 57 241 241 ASP ASP B . n B 1 58 LEU 58 242 242 LEU LEU B . n B 1 59 VAL 59 243 243 VAL VAL B . n B 1 60 ASP 60 244 244 ASP ASP B . n B 1 61 GLU 61 245 245 GLU GLU B . n B 1 62 LEU 62 246 246 LEU LEU B . n B 1 63 ILE 63 247 247 ILE ILE B . n B 1 64 ILE 64 248 248 ILE ILE B . n B 1 65 HIS 65 249 249 HIS HIS B . n B 1 66 ILE 66 250 250 ILE ILE B . n B 1 67 SER 67 251 251 SER SER B . n B 1 68 LYS 68 252 252 LYS LYS B . n B 1 69 ARG 69 253 253 ARG ARG B . n B 1 70 ILE 70 254 254 ILE ILE B . n B 1 71 LYS 71 255 255 LYS LYS B . n B 1 72 ASP 72 256 256 ASP ASP B . n B 1 73 ILE 73 257 257 ILE ILE B . n B 1 74 ALA 74 258 258 ALA ALA B . n B 1 75 GLY 75 259 259 GLY GLY B . n B 1 76 GLU 76 260 260 GLU GLU B . n B 1 77 GLY 77 261 261 GLY GLY B . n B 1 78 ASN 78 262 262 ASN ASN B . n B 1 79 LYS 79 263 263 LYS LYS B . n B 1 80 ALA 80 264 264 ALA ALA B . n B 1 81 PHE 81 265 265 PHE PHE B . n B 1 82 LYS 82 266 266 LYS LYS B . n B 1 83 ILE 83 267 267 ILE ILE B . n B 1 84 GLY 84 268 268 GLY GLY B . n B 1 85 PHE 85 269 269 PHE PHE B . n B 1 86 ASP 86 270 270 ASP ASP B . n B 1 87 ARG 87 271 271 ARG ARG B . n B 1 88 PHE 88 272 272 PHE PHE B . n B 1 89 ALA 89 273 273 ALA ALA B . n B 1 90 ILE 90 274 274 ILE ILE B . n B 1 91 ILE 91 275 275 ILE ILE B . n B 1 92 CYS 92 276 276 CYS CYS B . n B 1 93 LYS 93 277 277 LYS LYS B . n B 1 94 SER 94 278 278 SER SER B . n B 1 95 GLU 95 279 279 GLU GLU B . n B 1 96 ASN 96 280 280 ASN ASN B . n B 1 97 ILE 97 281 281 ILE ILE B . n B 1 98 SER 98 282 282 SER SER B . n B 1 99 ASP 99 283 283 ASP ASP B . n B 1 100 PHE 100 284 284 PHE PHE B . n B 1 101 ILE 101 285 285 ILE ILE B . n B 1 102 GLU 102 286 286 GLU GLU B . n B 1 103 ARG 103 287 287 ARG ARG B . n B 1 104 MSE 104 288 288 MSE MSE B . n B 1 105 LEU 105 289 289 LEU LEU B . n B 1 106 SER 106 290 290 SER SER B . n B 1 107 GLN 107 291 291 GLN GLN B . n B 1 108 LEU 108 292 292 LEU LEU B . n B 1 109 LEU 109 293 293 LEU LEU B . n B 1 110 LEU 110 294 294 LEU LEU B . n B 1 111 PRO 111 295 295 PRO PRO B . n B 1 112 TYR 112 296 296 TYR TYR B . n B 1 113 ASN 113 297 297 ASN ASN B . n B 1 114 VAL 114 298 298 VAL VAL B . n B 1 115 ASN 115 299 299 ASN ASN B . n B 1 116 GLY 116 300 300 GLY GLY B . n B 1 117 ASN 117 301 301 ASN ASN B . n B 1 118 LEU 118 302 302 LEU LEU B . n B 1 119 ILE 119 303 303 ILE ILE B . n B 1 120 ARG 120 304 304 ARG ARG B . n B 1 121 VAL 121 305 305 VAL VAL B . n B 1 122 ASN 122 306 306 ASN ASN B . n B 1 123 PHE 123 307 307 PHE PHE B . n B 1 124 ASN 124 308 308 ASN ASN B . n B 1 125 ILE 125 309 309 ILE ILE B . n B 1 126 GLY 126 310 310 GLY GLY B . n B 1 127 ALA 127 311 311 ALA ALA B . n B 1 128 ALA 128 312 312 ALA ALA B . n B 1 129 GLN 129 313 313 GLN GLN B . n B 1 130 ILE 130 314 314 ILE ILE B . n B 1 131 GLU 131 315 315 GLU GLU B . n B 1 132 ASN 132 316 ? ? ? B . n B 1 133 SER 133 317 ? ? ? B . n B 1 134 ASN 134 318 ? ? ? B . n B 1 135 GLU 135 319 ? ? ? B . n B 1 136 ALA 136 320 320 ALA ALA B . n B 1 137 ALA 137 321 321 ALA ALA B . n B 1 138 ALA 138 322 322 ALA ALA B . n B 1 139 ASN 139 323 323 ASN ASN B . n B 1 140 LEU 140 324 324 LEU LEU B . n B 1 141 MSE 141 325 325 MSE MSE B . n B 1 142 ARG 142 326 326 ARG ARG B . n B 1 143 ARG 143 327 327 ARG ARG B . n B 1 144 CYS 144 328 328 CYS CYS B . n B 1 145 ASP 145 329 329 ASP ASP B . n B 1 146 LEU 146 330 330 LEU LEU B . n B 1 147 ALA 147 331 331 ALA ALA B . n B 1 148 LEU 148 332 332 LEU LEU B . n B 1 149 ILE 149 333 333 ILE ILE B . n B 1 150 LYS 150 334 334 LYS LYS B . n B 1 151 ALA 151 335 335 ALA ALA B . n B 1 152 LYS 152 336 336 LYS LYS B . n B 1 153 GLU 153 337 337 GLU GLU B . n B 1 154 GLU 154 338 338 GLU GLU B . n B 1 155 GLY 155 339 339 GLY GLY B . n B 1 156 LEU 156 340 340 LEU LEU B . n B 1 157 ASN 157 341 341 ASN ASN B . n B 1 158 GLU 158 342 342 GLU GLU B . n B 1 159 TYR 159 343 343 TYR TYR B . n B 1 160 VAL 160 344 344 VAL VAL B . n B 1 161 ILE 161 345 345 ILE ILE B . n B 1 162 PHE 162 346 346 PHE PHE B . n B 1 163 LYS 163 347 347 LYS LYS B . n B 1 164 PRO 164 348 348 PRO PRO B . n B 1 165 SER 165 349 ? ? ? B . n B 1 166 ILE 166 350 350 ILE ILE B . n B 1 167 GLU 167 351 351 GLU GLU B . n B 1 168 ILE 168 352 352 ILE ILE B . n B 1 169 GLN 169 353 353 GLN GLN B . n B 1 170 THR 170 354 ? ? ? B . n B 1 171 LEU 171 355 ? ? ? B . n B 1 172 GLU 172 356 ? ? ? B . n B 1 173 HIS 173 357 ? ? ? B . n B 1 174 HIS 174 358 ? ? ? B . n B 1 175 HIS 175 359 ? ? ? B . n B 1 176 HIS 176 360 ? ? ? B . n B 1 177 HIS 177 361 ? ? ? B . n B 1 178 HIS 178 362 ? ? ? B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.initial_of_center NESG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 2 2 HOH HOH A . C 2 HOH 2 6 6 HOH HOH A . C 2 HOH 3 7 7 HOH HOH A . C 2 HOH 4 8 8 HOH HOH A . C 2 HOH 5 10 10 HOH HOH A . C 2 HOH 6 11 11 HOH HOH A . C 2 HOH 7 17 17 HOH HOH A . C 2 HOH 8 21 21 HOH HOH A . C 2 HOH 9 22 22 HOH HOH A . C 2 HOH 10 23 23 HOH HOH A . C 2 HOH 11 25 25 HOH HOH A . C 2 HOH 12 28 28 HOH HOH A . C 2 HOH 13 31 31 HOH HOH A . C 2 HOH 14 35 35 HOH HOH A . C 2 HOH 15 38 38 HOH HOH A . C 2 HOH 16 40 40 HOH HOH A . C 2 HOH 17 46 46 HOH HOH A . C 2 HOH 18 48 48 HOH HOH A . C 2 HOH 19 49 49 HOH HOH A . D 2 HOH 1 3 3 HOH HOH B . D 2 HOH 2 4 4 HOH HOH B . D 2 HOH 3 5 5 HOH HOH B . D 2 HOH 4 9 9 HOH HOH B . D 2 HOH 5 13 13 HOH HOH B . D 2 HOH 6 14 14 HOH HOH B . D 2 HOH 7 15 15 HOH HOH B . D 2 HOH 8 18 18 HOH HOH B . D 2 HOH 9 19 19 HOH HOH B . D 2 HOH 10 20 20 HOH HOH B . D 2 HOH 11 24 24 HOH HOH B . D 2 HOH 12 26 26 HOH HOH B . D 2 HOH 13 29 29 HOH HOH B . D 2 HOH 14 30 30 HOH HOH B . D 2 HOH 15 32 32 HOH HOH B . D 2 HOH 16 33 33 HOH HOH B . D 2 HOH 17 34 34 HOH HOH B . D 2 HOH 18 36 36 HOH HOH B . D 2 HOH 19 42 42 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 32 A MSE 216 ? MET SELENOMETHIONINE 2 A MSE 104 A MSE 288 ? MET SELENOMETHIONINE 3 A MSE 141 A MSE 325 ? MET SELENOMETHIONINE 4 B MSE 104 B MSE 288 ? MET SELENOMETHIONINE 5 B MSE 141 B MSE 325 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B,D 3 1 A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 3 'ABSA (A^2)' 1840 ? 3 MORE -5 ? 3 'SSA (A^2)' 15640 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-06-02 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 1 3 2019-07-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.language' 5 4 'Structure model' '_software.location' 6 4 'Structure model' '_software.name' 7 4 'Structure model' '_software.type' 8 4 'Structure model' '_software.version' 9 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal CNS 1.2 ? ? ? ? refinement ? ? ? 1 PDB_EXTRACT 3.00 'March. 27, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 2 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 3 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 4 SnB . ? ? ? ? phasing ? ? ? 5 REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 6 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MSE A 216 ? ? -56.42 -87.33 2 1 ILE A 219 ? ? -22.36 78.76 3 1 LEU B 211 ? ? -106.80 -69.08 4 1 CYS B 218 ? ? -160.61 -14.36 5 1 ASN B 280 ? ? -171.98 69.31 6 1 PRO B 295 ? ? -41.95 161.97 7 1 ILE B 314 ? ? -53.16 93.35 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 185 ? A SER 1 2 1 Y 1 A ASN 316 ? A ASN 132 3 1 Y 1 A SER 317 ? A SER 133 4 1 Y 1 A ASN 318 ? A ASN 134 5 1 Y 1 A GLU 319 ? A GLU 135 6 1 Y 1 A SER 349 ? A SER 165 7 1 Y 1 A THR 354 ? A THR 170 8 1 Y 1 A LEU 355 ? A LEU 171 9 1 Y 1 A GLU 356 ? A GLU 172 10 1 Y 1 A HIS 357 ? A HIS 173 11 1 Y 1 A HIS 358 ? A HIS 174 12 1 Y 1 A HIS 359 ? A HIS 175 13 1 Y 1 A HIS 360 ? A HIS 176 14 1 Y 1 A HIS 361 ? A HIS 177 15 1 Y 1 A HIS 362 ? A HIS 178 16 1 Y 1 B SER 185 ? B SER 1 17 1 Y 1 B MSE 216 ? B MSE 32 18 1 Y 1 B ASN 316 ? B ASN 132 19 1 Y 1 B SER 317 ? B SER 133 20 1 Y 1 B ASN 318 ? B ASN 134 21 1 Y 1 B GLU 319 ? B GLU 135 22 1 Y 1 B SER 349 ? B SER 165 23 1 Y 1 B THR 354 ? B THR 170 24 1 Y 1 B LEU 355 ? B LEU 171 25 1 Y 1 B GLU 356 ? B GLU 172 26 1 Y 1 B HIS 357 ? B HIS 173 27 1 Y 1 B HIS 358 ? B HIS 174 28 1 Y 1 B HIS 359 ? B HIS 175 29 1 Y 1 B HIS 360 ? B HIS 176 30 1 Y 1 B HIS 361 ? B HIS 177 31 1 Y 1 B HIS 362 ? B HIS 178 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #