data_3MUL # _entry.id 3MUL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3MUL pdb_00003mul 10.2210/pdb3mul/pdb RCSB RCSB059012 ? ? WWPDB D_1000059012 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3MUK . unspecified PDB 3JVK . unspecified PDB 3JVJ . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3MUL _pdbx_database_status.recvd_initial_deposition_date 2010-05-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Vollmuth, F.' 1 'Geyer, M.' 2 # _citation.id primary _citation.title 'Interaction of propionylated and butyrylated histone H3 lysine marks with Brd4 bromodomains' _citation.journal_abbrev Angew.Chem.Int.Ed.Engl. _citation.journal_volume 49 _citation.page_first 6768 _citation.page_last 6772 _citation.year 2010 _citation.journal_id_ASTM ? _citation.country GE _citation.journal_id_ISSN 1433-7851 _citation.journal_id_CSD 9999 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20715035 _citation.pdbx_database_id_DOI 10.1002/anie.201002724 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Vollmuth, F.' 1 ? primary 'Geyer, M.' 2 ? # _cell.entry_id 3MUL _cell.length_a 34.004 _cell.length_b 47.232 _cell.length_c 77.977 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3MUL _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bromodomain-containing protein 4' 15385.665 1 ? ? 'bromodomain, UNP residues 42-168' ? 2 polymer syn 'Peptide of Histone H3.3' 913.076 1 ? ? 'histone H3 peptide, UNP residues 13-20' ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 4 water nat water 18.015 135 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Brd4, Mitotic chromosome-associated protein, MCAP' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GAMGSTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENN YYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; ;GAMGSTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENN YYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; A ? 2 'polypeptide(L)' no yes 'GG(BTK)APRKQ' GGXAPRKQ D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 MET n 1 4 GLY n 1 5 SER n 1 6 THR n 1 7 ASN n 1 8 PRO n 1 9 PRO n 1 10 PRO n 1 11 PRO n 1 12 GLU n 1 13 THR n 1 14 SER n 1 15 ASN n 1 16 PRO n 1 17 ASN n 1 18 LYS n 1 19 PRO n 1 20 LYS n 1 21 ARG n 1 22 GLN n 1 23 THR n 1 24 ASN n 1 25 GLN n 1 26 LEU n 1 27 GLN n 1 28 TYR n 1 29 LEU n 1 30 LEU n 1 31 ARG n 1 32 VAL n 1 33 VAL n 1 34 LEU n 1 35 LYS n 1 36 THR n 1 37 LEU n 1 38 TRP n 1 39 LYS n 1 40 HIS n 1 41 GLN n 1 42 PHE n 1 43 ALA n 1 44 TRP n 1 45 PRO n 1 46 PHE n 1 47 GLN n 1 48 GLN n 1 49 PRO n 1 50 VAL n 1 51 ASP n 1 52 ALA n 1 53 VAL n 1 54 LYS n 1 55 LEU n 1 56 ASN n 1 57 LEU n 1 58 PRO n 1 59 ASP n 1 60 TYR n 1 61 TYR n 1 62 LYS n 1 63 ILE n 1 64 ILE n 1 65 LYS n 1 66 THR n 1 67 PRO n 1 68 MET n 1 69 ASP n 1 70 MET n 1 71 GLY n 1 72 THR n 1 73 ILE n 1 74 LYS n 1 75 LYS n 1 76 ARG n 1 77 LEU n 1 78 GLU n 1 79 ASN n 1 80 ASN n 1 81 TYR n 1 82 TYR n 1 83 TRP n 1 84 ASN n 1 85 ALA n 1 86 GLN n 1 87 GLU n 1 88 CYS n 1 89 ILE n 1 90 GLN n 1 91 ASP n 1 92 PHE n 1 93 ASN n 1 94 THR n 1 95 MET n 1 96 PHE n 1 97 THR n 1 98 ASN n 1 99 CYS n 1 100 TYR n 1 101 ILE n 1 102 TYR n 1 103 ASN n 1 104 LYS n 1 105 PRO n 1 106 GLY n 1 107 ASP n 1 108 ASP n 1 109 ILE n 1 110 VAL n 1 111 LEU n 1 112 MET n 1 113 ALA n 1 114 GLU n 1 115 ALA n 1 116 LEU n 1 117 GLU n 1 118 LYS n 1 119 LEU n 1 120 PHE n 1 121 LEU n 1 122 GLN n 1 123 LYS n 1 124 ILE n 1 125 ASN n 1 126 GLU n 1 127 LEU n 1 128 PRO n 1 129 THR n 1 130 GLU n 1 131 GLU n 2 1 GLY n 2 2 GLY n 2 3 BTK n 2 4 ALA n 2 5 PRO n 2 6 ARG n 2 7 LYS n 2 8 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Brd4, Mcap' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pProEx-HTb _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Fmoc solid phase synthesis' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP BRD4_MOUSE Q9ESU6 1 ;STNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWN AQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; 42 ? 2 UNP H33_HUMAN P84243 2 GGKAPRKQ 13 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3MUL A 5 ? 131 ? Q9ESU6 42 ? 168 ? 42 168 2 2 3MUL D 1 ? 8 ? P84243 13 ? 20 ? 0 7 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3MUL GLY A 1 ? UNP Q9ESU6 ? ? 'expression tag' 38 1 1 3MUL ALA A 2 ? UNP Q9ESU6 ? ? 'expression tag' 39 2 1 3MUL MET A 3 ? UNP Q9ESU6 ? ? 'expression tag' 40 3 1 3MUL GLY A 4 ? UNP Q9ESU6 ? ? 'expression tag' 41 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BTK 'L-peptide linking' n N~6~-butanoyl-L-lysine ? 'C10 H20 N2 O3' 216.277 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3MUL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.92 _exptl_crystal.density_percent_sol 35.97 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;3.6M Na formate, 10% glycerol, soaked with 20-times excess of histone octapeptide, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2009-11-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Diamond(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.978946 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.978946 # _reflns.entry_id 3MUL _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F -3.00 _reflns.d_resolution_low 19.6 _reflns.d_resolution_high 1.65 _reflns.number_obs 15640 _reflns.number_all 15640 _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.080 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 20.8 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.65 _reflns_shell.d_res_low 1.70 _reflns_shell.percent_possible_all 98.8 _reflns_shell.Rmerge_I_obs 0.502 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.1 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3MUL _refine.ls_number_reflns_obs 14813 _refine.ls_number_reflns_all 14813 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.60 _refine.ls_d_res_high 1.65 _refine.ls_percent_reflns_obs 99.51 _refine.ls_R_factor_obs 0.18046 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17799 _refine.ls_R_factor_R_free 0.22578 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 815 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.966 _refine.correlation_coeff_Fo_to_Fc_free 0.944 _refine.B_iso_mean 24.305 _refine.aniso_B[1][1] 4.04 _refine.aniso_B[2][2] -1.92 _refine.aniso_B[3][3] -2.12 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 3JVJ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.104 _refine.pdbx_overall_ESU_R_Free 0.108 _refine.overall_SU_ML 0.078 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 5.240 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1057 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 135 _refine_hist.number_atoms_total 1196 _refine_hist.d_res_high 1.65 _refine_hist.d_res_low 19.60 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.025 0.022 ? 1096 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.114 1.978 ? 1490 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.708 5.000 ? 129 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.694 26.078 ? 51 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.272 15.000 ? 186 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 12.478 15.000 ? 2 'X-RAY DIFFRACTION' ? r_chiral_restr 0.430 0.200 ? 160 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.013 0.022 ? 834 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.618 1.500 ? 654 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.531 2.000 ? 1070 'X-RAY DIFFRACTION' ? r_scbond_it 3.507 3.000 ? 442 'X-RAY DIFFRACTION' ? r_scangle_it 5.190 4.500 ? 419 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.650 _refine_ls_shell.d_res_low 1.693 _refine_ls_shell.number_reflns_R_work 1066 _refine_ls_shell.R_factor_R_work 0.235 _refine_ls_shell.percent_reflns_obs 98.67 _refine_ls_shell.R_factor_R_free 0.279 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 51 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3MUL _struct.title 'Crystal structure of Brd4 bromodomain 1 with butyrylated histone H3-K(buty)14' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3MUL _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'bromodomain, histone recognition, N-butyryl lysine, acylation, SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 23 ? VAL A 32 ? THR A 60 VAL A 69 1 ? 10 HELX_P HELX_P2 2 VAL A 32 ? TRP A 38 ? VAL A 69 TRP A 75 1 ? 7 HELX_P HELX_P3 3 ALA A 43 ? GLN A 47 ? ALA A 80 GLN A 84 5 ? 5 HELX_P HELX_P4 4 ASP A 59 ? ILE A 64 ? ASP A 96 ILE A 101 1 ? 6 HELX_P HELX_P5 5 ASP A 69 ? ASN A 79 ? ASP A 106 ASN A 116 1 ? 11 HELX_P HELX_P6 6 ASN A 84 ? ASN A 103 ? ASN A 121 ASN A 140 1 ? 20 HELX_P HELX_P7 7 ASP A 107 ? ASN A 125 ? ASP A 144 ASN A 162 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag both _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_comp_id GLY _struct_conn.ptnr1_label_seq_id 2 _struct_conn.ptnr1_label_atom_id C _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id BTK _struct_conn.ptnr2_label_seq_id 3 _struct_conn.ptnr2_label_atom_id N _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id D _struct_conn.ptnr1_auth_comp_id GLY _struct_conn.ptnr1_auth_seq_id 1 _struct_conn.ptnr2_auth_asym_id D _struct_conn.ptnr2_auth_comp_id BTK _struct_conn.ptnr2_auth_seq_id 2 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.321 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id EDO _struct_site.pdbx_auth_seq_id 1 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'BINDING SITE FOR RESIDUE EDO A 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ILE A 63 ? ILE A 100 . ? 1_555 ? 2 AC1 5 ILE A 64 ? ILE A 101 . ? 1_555 ? 3 AC1 5 LYS A 65 ? LYS A 102 . ? 1_555 ? 4 AC1 5 THR A 66 ? THR A 103 . ? 1_555 ? 5 AC1 5 ASN A 98 ? ASN A 135 . ? 1_555 ? # _database_PDB_matrix.entry_id 3MUL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3MUL _atom_sites.fract_transf_matrix[1][1] 0.029408 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021172 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012824 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 38 ? ? ? A . n A 1 2 ALA 2 39 ? ? ? A . n A 1 3 MET 3 40 40 MET MET A . n A 1 4 GLY 4 41 41 GLY GLY A . n A 1 5 SER 5 42 42 SER SER A . n A 1 6 THR 6 43 43 THR THR A . n A 1 7 ASN 7 44 44 ASN ASN A . n A 1 8 PRO 8 45 45 PRO PRO A . n A 1 9 PRO 9 46 46 PRO PRO A . n A 1 10 PRO 10 47 47 PRO PRO A . n A 1 11 PRO 11 48 48 PRO PRO A . n A 1 12 GLU 12 49 49 GLU GLU A . n A 1 13 THR 13 50 50 THR THR A . n A 1 14 SER 14 51 51 SER SER A . n A 1 15 ASN 15 52 52 ASN ASN A . n A 1 16 PRO 16 53 53 PRO PRO A . n A 1 17 ASN 17 54 54 ASN ASN A . n A 1 18 LYS 18 55 55 LYS LYS A . n A 1 19 PRO 19 56 56 PRO PRO A . n A 1 20 LYS 20 57 57 LYS LYS A . n A 1 21 ARG 21 58 58 ARG ARG A . n A 1 22 GLN 22 59 59 GLN GLN A . n A 1 23 THR 23 60 60 THR THR A . n A 1 24 ASN 24 61 61 ASN ASN A . n A 1 25 GLN 25 62 62 GLN GLN A . n A 1 26 LEU 26 63 63 LEU LEU A . n A 1 27 GLN 27 64 64 GLN GLN A . n A 1 28 TYR 28 65 65 TYR TYR A . n A 1 29 LEU 29 66 66 LEU LEU A . n A 1 30 LEU 30 67 67 LEU LEU A . n A 1 31 ARG 31 68 68 ARG ARG A . n A 1 32 VAL 32 69 69 VAL VAL A . n A 1 33 VAL 33 70 70 VAL VAL A . n A 1 34 LEU 34 71 71 LEU LEU A . n A 1 35 LYS 35 72 72 LYS LYS A . n A 1 36 THR 36 73 73 THR THR A . n A 1 37 LEU 37 74 74 LEU LEU A . n A 1 38 TRP 38 75 75 TRP TRP A . n A 1 39 LYS 39 76 76 LYS LYS A . n A 1 40 HIS 40 77 77 HIS HIS A . n A 1 41 GLN 41 78 78 GLN GLN A . n A 1 42 PHE 42 79 79 PHE PHE A . n A 1 43 ALA 43 80 80 ALA ALA A . n A 1 44 TRP 44 81 81 TRP TRP A . n A 1 45 PRO 45 82 82 PRO PRO A . n A 1 46 PHE 46 83 83 PHE PHE A . n A 1 47 GLN 47 84 84 GLN GLN A . n A 1 48 GLN 48 85 85 GLN GLN A . n A 1 49 PRO 49 86 86 PRO PRO A . n A 1 50 VAL 50 87 87 VAL VAL A . n A 1 51 ASP 51 88 88 ASP ASP A . n A 1 52 ALA 52 89 89 ALA ALA A . n A 1 53 VAL 53 90 90 VAL VAL A . n A 1 54 LYS 54 91 91 LYS LYS A . n A 1 55 LEU 55 92 92 LEU LEU A . n A 1 56 ASN 56 93 93 ASN ASN A . n A 1 57 LEU 57 94 94 LEU LEU A . n A 1 58 PRO 58 95 95 PRO PRO A . n A 1 59 ASP 59 96 96 ASP ASP A . n A 1 60 TYR 60 97 97 TYR TYR A . n A 1 61 TYR 61 98 98 TYR TYR A . n A 1 62 LYS 62 99 99 LYS LYS A . n A 1 63 ILE 63 100 100 ILE ILE A . n A 1 64 ILE 64 101 101 ILE ILE A . n A 1 65 LYS 65 102 102 LYS LYS A . n A 1 66 THR 66 103 103 THR THR A . n A 1 67 PRO 67 104 104 PRO PRO A . n A 1 68 MET 68 105 105 MET MET A . n A 1 69 ASP 69 106 106 ASP ASP A . n A 1 70 MET 70 107 107 MET MET A . n A 1 71 GLY 71 108 108 GLY GLY A . n A 1 72 THR 72 109 109 THR THR A . n A 1 73 ILE 73 110 110 ILE ILE A . n A 1 74 LYS 74 111 111 LYS LYS A . n A 1 75 LYS 75 112 112 LYS LYS A . n A 1 76 ARG 76 113 113 ARG ARG A . n A 1 77 LEU 77 114 114 LEU LEU A . n A 1 78 GLU 78 115 115 GLU GLU A . n A 1 79 ASN 79 116 116 ASN ASN A . n A 1 80 ASN 80 117 117 ASN ASN A . n A 1 81 TYR 81 118 118 TYR TYR A . n A 1 82 TYR 82 119 119 TYR TYR A . n A 1 83 TRP 83 120 120 TRP TRP A . n A 1 84 ASN 84 121 121 ASN ASN A . n A 1 85 ALA 85 122 122 ALA ALA A . n A 1 86 GLN 86 123 123 GLN GLN A . n A 1 87 GLU 87 124 124 GLU GLU A . n A 1 88 CYS 88 125 125 CYS CYS A . n A 1 89 ILE 89 126 126 ILE ILE A . n A 1 90 GLN 90 127 127 GLN GLN A . n A 1 91 ASP 91 128 128 ASP ASP A . n A 1 92 PHE 92 129 129 PHE PHE A . n A 1 93 ASN 93 130 130 ASN ASN A . n A 1 94 THR 94 131 131 THR THR A . n A 1 95 MET 95 132 132 MET MET A . n A 1 96 PHE 96 133 133 PHE PHE A . n A 1 97 THR 97 134 134 THR THR A . n A 1 98 ASN 98 135 135 ASN ASN A . n A 1 99 CYS 99 136 136 CYS CYS A . n A 1 100 TYR 100 137 137 TYR TYR A . n A 1 101 ILE 101 138 138 ILE ILE A . n A 1 102 TYR 102 139 139 TYR TYR A . n A 1 103 ASN 103 140 140 ASN ASN A . n A 1 104 LYS 104 141 141 LYS LYS A . n A 1 105 PRO 105 142 142 PRO PRO A . n A 1 106 GLY 106 143 143 GLY GLY A . n A 1 107 ASP 107 144 144 ASP ASP A . n A 1 108 ASP 108 145 145 ASP ASP A . n A 1 109 ILE 109 146 146 ILE ILE A . n A 1 110 VAL 110 147 147 VAL VAL A . n A 1 111 LEU 111 148 148 LEU LEU A . n A 1 112 MET 112 149 149 MET MET A . n A 1 113 ALA 113 150 150 ALA ALA A . n A 1 114 GLU 114 151 151 GLU GLU A . n A 1 115 ALA 115 152 152 ALA ALA A . n A 1 116 LEU 116 153 153 LEU LEU A . n A 1 117 GLU 117 154 154 GLU GLU A . n A 1 118 LYS 118 155 155 LYS LYS A . n A 1 119 LEU 119 156 156 LEU LEU A . n A 1 120 PHE 120 157 157 PHE PHE A . n A 1 121 LEU 121 158 158 LEU LEU A . n A 1 122 GLN 122 159 159 GLN GLN A . n A 1 123 LYS 123 160 160 LYS LYS A . n A 1 124 ILE 124 161 161 ILE ILE A . n A 1 125 ASN 125 162 162 ASN ASN A . n A 1 126 GLU 126 163 163 GLU GLU A . n A 1 127 LEU 127 164 164 LEU LEU A . n A 1 128 PRO 128 165 165 PRO PRO A . n A 1 129 THR 129 166 166 THR THR A . n A 1 130 GLU 130 167 ? ? ? A . n A 1 131 GLU 131 168 ? ? ? A . n B 2 1 GLY 1 0 ? ? ? D . n B 2 2 GLY 2 1 1 GLY GLY D . n B 2 3 BTK 3 2 2 BTK BUK D . n B 2 4 ALA 4 3 ? ? ? D . n B 2 5 PRO 5 4 ? ? ? D . n B 2 6 ARG 6 5 ? ? ? D . n B 2 7 LYS 7 6 ? ? ? D . n B 2 8 GLN 8 7 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO 1 1 1 EDO EDO A . D 4 HOH 1 2 2 HOH HOH A . D 4 HOH 2 3 3 HOH HOH A . D 4 HOH 3 4 4 HOH HOH A . D 4 HOH 4 5 5 HOH HOH A . D 4 HOH 5 6 6 HOH HOH A . D 4 HOH 6 7 7 HOH HOH A . D 4 HOH 7 8 8 HOH HOH A . D 4 HOH 8 9 9 HOH HOH A . D 4 HOH 9 10 10 HOH HOH A . D 4 HOH 10 11 11 HOH HOH A . D 4 HOH 11 12 12 HOH HOH A . D 4 HOH 12 13 13 HOH HOH A . D 4 HOH 13 14 14 HOH HOH A . D 4 HOH 14 15 15 HOH HOH A . D 4 HOH 15 16 16 HOH HOH A . D 4 HOH 16 17 17 HOH HOH A . D 4 HOH 17 18 18 HOH HOH A . D 4 HOH 18 19 19 HOH HOH A . D 4 HOH 19 20 20 HOH HOH A . D 4 HOH 20 21 21 HOH HOH A . D 4 HOH 21 22 22 HOH HOH A . D 4 HOH 22 23 23 HOH HOH A . D 4 HOH 23 24 24 HOH HOH A . D 4 HOH 24 25 25 HOH HOH A . D 4 HOH 25 26 26 HOH HOH A . D 4 HOH 26 27 27 HOH HOH A . D 4 HOH 27 28 28 HOH HOH A . D 4 HOH 28 29 29 HOH HOH A . D 4 HOH 29 30 30 HOH HOH A . D 4 HOH 30 31 31 HOH HOH A . D 4 HOH 31 32 32 HOH HOH A . D 4 HOH 32 33 33 HOH HOH A . D 4 HOH 33 34 34 HOH HOH A . D 4 HOH 34 35 35 HOH HOH A . D 4 HOH 35 36 36 HOH HOH A . D 4 HOH 36 37 37 HOH HOH A . D 4 HOH 37 169 1 HOH HOH A . D 4 HOH 38 170 38 HOH HOH A . D 4 HOH 39 171 39 HOH HOH A . D 4 HOH 40 172 40 HOH HOH A . D 4 HOH 41 173 41 HOH HOH A . D 4 HOH 42 174 42 HOH HOH A . D 4 HOH 43 175 43 HOH HOH A . D 4 HOH 44 176 44 HOH HOH A . D 4 HOH 45 177 45 HOH HOH A . D 4 HOH 46 178 46 HOH HOH A . D 4 HOH 47 179 47 HOH HOH A . D 4 HOH 48 180 48 HOH HOH A . D 4 HOH 49 181 49 HOH HOH A . D 4 HOH 50 182 50 HOH HOH A . D 4 HOH 51 183 51 HOH HOH A . D 4 HOH 52 184 52 HOH HOH A . D 4 HOH 53 185 53 HOH HOH A . D 4 HOH 54 186 54 HOH HOH A . D 4 HOH 55 187 55 HOH HOH A . D 4 HOH 56 188 56 HOH HOH A . D 4 HOH 57 189 57 HOH HOH A . D 4 HOH 58 190 58 HOH HOH A . D 4 HOH 59 191 59 HOH HOH A . D 4 HOH 60 192 60 HOH HOH A . D 4 HOH 61 193 61 HOH HOH A . D 4 HOH 62 194 62 HOH HOH A . D 4 HOH 63 195 63 HOH HOH A . D 4 HOH 64 196 64 HOH HOH A . D 4 HOH 65 197 65 HOH HOH A . D 4 HOH 66 198 66 HOH HOH A . D 4 HOH 67 199 67 HOH HOH A . D 4 HOH 68 200 68 HOH HOH A . D 4 HOH 69 201 69 HOH HOH A . D 4 HOH 70 202 70 HOH HOH A . D 4 HOH 71 203 71 HOH HOH A . D 4 HOH 72 204 72 HOH HOH A . D 4 HOH 73 205 73 HOH HOH A . D 4 HOH 74 206 74 HOH HOH A . D 4 HOH 75 207 75 HOH HOH A . D 4 HOH 76 208 76 HOH HOH A . D 4 HOH 77 209 77 HOH HOH A . D 4 HOH 78 210 78 HOH HOH A . D 4 HOH 79 211 79 HOH HOH A . D 4 HOH 80 212 80 HOH HOH A . D 4 HOH 81 213 81 HOH HOH A . D 4 HOH 82 214 82 HOH HOH A . D 4 HOH 83 215 83 HOH HOH A . D 4 HOH 84 216 84 HOH HOH A . D 4 HOH 85 217 85 HOH HOH A . D 4 HOH 86 218 86 HOH HOH A . D 4 HOH 87 219 87 HOH HOH A . D 4 HOH 88 220 88 HOH HOH A . D 4 HOH 89 221 89 HOH HOH A . D 4 HOH 90 222 90 HOH HOH A . D 4 HOH 91 223 91 HOH HOH A . D 4 HOH 92 224 92 HOH HOH A . D 4 HOH 93 225 93 HOH HOH A . D 4 HOH 94 226 94 HOH HOH A . D 4 HOH 95 227 95 HOH HOH A . D 4 HOH 96 228 96 HOH HOH A . D 4 HOH 97 229 97 HOH HOH A . D 4 HOH 98 230 98 HOH HOH A . D 4 HOH 99 231 99 HOH HOH A . D 4 HOH 100 232 100 HOH HOH A . D 4 HOH 101 233 101 HOH HOH A . D 4 HOH 102 234 102 HOH HOH A . D 4 HOH 103 235 103 HOH HOH A . D 4 HOH 104 236 104 HOH HOH A . D 4 HOH 105 237 105 HOH HOH A . D 4 HOH 106 238 106 HOH HOH A . D 4 HOH 107 239 107 HOH HOH A . D 4 HOH 108 240 108 HOH HOH A . D 4 HOH 109 241 109 HOH HOH A . D 4 HOH 110 242 110 HOH HOH A . D 4 HOH 111 243 111 HOH HOH A . D 4 HOH 112 244 112 HOH HOH A . D 4 HOH 113 245 113 HOH HOH A . D 4 HOH 114 246 114 HOH HOH A . D 4 HOH 115 247 115 HOH HOH A . D 4 HOH 116 248 116 HOH HOH A . D 4 HOH 117 249 117 HOH HOH A . D 4 HOH 118 250 118 HOH HOH A . D 4 HOH 119 251 119 HOH HOH A . D 4 HOH 120 252 120 HOH HOH A . D 4 HOH 121 253 121 HOH HOH A . D 4 HOH 122 254 122 HOH HOH A . D 4 HOH 123 255 123 HOH HOH A . D 4 HOH 124 256 125 HOH HOH A . D 4 HOH 125 257 126 HOH HOH A . D 4 HOH 126 258 127 HOH HOH A . D 4 HOH 127 259 128 HOH HOH A . D 4 HOH 128 260 129 HOH HOH A . D 4 HOH 129 261 130 HOH HOH A . D 4 HOH 130 262 131 HOH HOH A . D 4 HOH 131 263 132 HOH HOH A . D 4 HOH 132 264 133 HOH HOH A . D 4 HOH 133 265 134 HOH HOH A . D 4 HOH 134 266 135 HOH HOH A . E 4 HOH 1 124 124 HOH HOH D . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id BTK _pdbx_struct_mod_residue.label_seq_id 3 _pdbx_struct_mod_residue.auth_asym_id D _pdbx_struct_mod_residue.auth_comp_id BTK _pdbx_struct_mod_residue.auth_seq_id 2 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id LYS _pdbx_struct_mod_residue.details N~6~-BUTANOYL-L-LYSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-08-11 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_ref_seq_dif 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_ref_seq_dif.details' 5 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -6.1082 _pdbx_refine_tls.origin_y 2.6083 _pdbx_refine_tls.origin_z 8.2936 _pdbx_refine_tls.T[1][1] 0.0072 _pdbx_refine_tls.T[2][2] 0.0426 _pdbx_refine_tls.T[3][3] 0.0258 _pdbx_refine_tls.T[1][2] -0.0013 _pdbx_refine_tls.T[1][3] -0.0068 _pdbx_refine_tls.T[2][3] -0.0002 _pdbx_refine_tls.L[1][1] 0.3650 _pdbx_refine_tls.L[2][2] 1.5068 _pdbx_refine_tls.L[3][3] 0.7639 _pdbx_refine_tls.L[1][2] 0.0329 _pdbx_refine_tls.L[1][3] 0.2492 _pdbx_refine_tls.L[2][3] 0.3507 _pdbx_refine_tls.S[1][1] -0.0320 _pdbx_refine_tls.S[1][2] -0.0287 _pdbx_refine_tls.S[1][3] 0.0176 _pdbx_refine_tls.S[2][1] -0.0731 _pdbx_refine_tls.S[2][2] -0.0227 _pdbx_refine_tls.S[2][3] 0.0335 _pdbx_refine_tls.S[3][1] -0.0259 _pdbx_refine_tls.S[3][2] -0.1206 _pdbx_refine_tls.S[3][3] 0.0547 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 40 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 166 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 REFMAC refinement 5.5.0072 ? 2 XDS 'data reduction' . ? 3 XSCALE 'data scaling' . ? 4 REFMAC phasing 5.5.0072 ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 28 ? ? O A HOH 247 ? ? 1.70 2 1 O A HOH 30 ? ? O A HOH 230 ? ? 2.14 3 1 OE2 A GLU 151 ? ? O A HOH 220 ? ? 2.14 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 113 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 113 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 113 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 124.73 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 4.43 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 52 ? ? -160.05 99.79 2 1 VAL A 69 ? ? -104.08 -61.34 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 59 ? CG ? A GLN 22 CG 2 1 Y 1 A GLN 59 ? CD ? A GLN 22 CD 3 1 Y 1 A GLN 59 ? OE1 ? A GLN 22 OE1 4 1 Y 1 A GLN 59 ? NE2 ? A GLN 22 NE2 5 1 Y 1 A ARG 68 ? CG ? A ARG 31 CG 6 1 Y 1 A ARG 68 ? CD ? A ARG 31 CD 7 1 Y 1 A ARG 68 ? NE ? A ARG 31 NE 8 1 Y 1 A ARG 68 ? CZ ? A ARG 31 CZ 9 1 Y 1 A ARG 68 ? NH1 ? A ARG 31 NH1 10 1 Y 1 A ARG 68 ? NH2 ? A ARG 31 NH2 11 1 Y 1 A LYS 76 ? CE ? A LYS 39 CE 12 1 Y 1 A LYS 76 ? NZ ? A LYS 39 NZ 13 1 Y 1 A LYS 112 ? NZ ? A LYS 75 NZ 14 1 Y 1 A LYS 160 ? CE ? A LYS 123 CE 15 1 Y 1 A LYS 160 ? NZ ? A LYS 123 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 38 ? A GLY 1 2 1 Y 1 A ALA 39 ? A ALA 2 3 1 Y 1 A GLU 167 ? A GLU 130 4 1 Y 1 A GLU 168 ? A GLU 131 5 1 Y 1 D GLY 0 ? B GLY 1 6 1 Y 1 D ALA 3 ? B ALA 4 7 1 Y 1 D PRO 4 ? B PRO 5 8 1 Y 1 D ARG 5 ? B ARG 6 9 1 Y 1 D LYS 6 ? B LYS 7 10 1 Y 1 D GLN 7 ? B GLN 8 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BTK C C N N 74 BTK N N N N 75 BTK O O N N 76 BTK CA C N S 77 BTK CB C N N 78 BTK CD C N N 79 BTK CE C N N 80 BTK CG C N N 81 BTK NZ N N N 82 BTK CAA C N N 83 BTK OAD O N N 84 BTK CAF C N N 85 BTK CAJ C N N 86 BTK CAN C N N 87 BTK OXT O N N 88 BTK H H N N 89 BTK H2 H N N 90 BTK HA H N N 91 BTK HB2 H N N 92 BTK HB3 H N N 93 BTK HD2 H N N 94 BTK HD3 H N N 95 BTK HE2 H N N 96 BTK HE3 H N N 97 BTK HG2 H N N 98 BTK HG3 H N N 99 BTK HNZ H N N 100 BTK HAA H N N 101 BTK HAAA H N N 102 BTK HAAB H N N 103 BTK HAF H N N 104 BTK HAFA H N N 105 BTK HAJ H N N 106 BTK HAJA H N N 107 BTK HXT H N N 108 CYS N N N N 109 CYS CA C N R 110 CYS C C N N 111 CYS O O N N 112 CYS CB C N N 113 CYS SG S N N 114 CYS OXT O N N 115 CYS H H N N 116 CYS H2 H N N 117 CYS HA H N N 118 CYS HB2 H N N 119 CYS HB3 H N N 120 CYS HG H N N 121 CYS HXT H N N 122 EDO C1 C N N 123 EDO O1 O N N 124 EDO C2 C N N 125 EDO O2 O N N 126 EDO H11 H N N 127 EDO H12 H N N 128 EDO HO1 H N N 129 EDO H21 H N N 130 EDO H22 H N N 131 EDO HO2 H N N 132 GLN N N N N 133 GLN CA C N S 134 GLN C C N N 135 GLN O O N N 136 GLN CB C N N 137 GLN CG C N N 138 GLN CD C N N 139 GLN OE1 O N N 140 GLN NE2 N N N 141 GLN OXT O N N 142 GLN H H N N 143 GLN H2 H N N 144 GLN HA H N N 145 GLN HB2 H N N 146 GLN HB3 H N N 147 GLN HG2 H N N 148 GLN HG3 H N N 149 GLN HE21 H N N 150 GLN HE22 H N N 151 GLN HXT H N N 152 GLU N N N N 153 GLU CA C N S 154 GLU C C N N 155 GLU O O N N 156 GLU CB C N N 157 GLU CG C N N 158 GLU CD C N N 159 GLU OE1 O N N 160 GLU OE2 O N N 161 GLU OXT O N N 162 GLU H H N N 163 GLU H2 H N N 164 GLU HA H N N 165 GLU HB2 H N N 166 GLU HB3 H N N 167 GLU HG2 H N N 168 GLU HG3 H N N 169 GLU HE2 H N N 170 GLU HXT H N N 171 GLY N N N N 172 GLY CA C N N 173 GLY C C N N 174 GLY O O N N 175 GLY OXT O N N 176 GLY H H N N 177 GLY H2 H N N 178 GLY HA2 H N N 179 GLY HA3 H N N 180 GLY HXT H N N 181 HIS N N N N 182 HIS CA C N S 183 HIS C C N N 184 HIS O O N N 185 HIS CB C N N 186 HIS CG C Y N 187 HIS ND1 N Y N 188 HIS CD2 C Y N 189 HIS CE1 C Y N 190 HIS NE2 N Y N 191 HIS OXT O N N 192 HIS H H N N 193 HIS H2 H N N 194 HIS HA H N N 195 HIS HB2 H N N 196 HIS HB3 H N N 197 HIS HD1 H N N 198 HIS HD2 H N N 199 HIS HE1 H N N 200 HIS HE2 H N N 201 HIS HXT H N N 202 HOH O O N N 203 HOH H1 H N N 204 HOH H2 H N N 205 ILE N N N N 206 ILE CA C N S 207 ILE C C N N 208 ILE O O N N 209 ILE CB C N S 210 ILE CG1 C N N 211 ILE CG2 C N N 212 ILE CD1 C N N 213 ILE OXT O N N 214 ILE H H N N 215 ILE H2 H N N 216 ILE HA H N N 217 ILE HB H N N 218 ILE HG12 H N N 219 ILE HG13 H N N 220 ILE HG21 H N N 221 ILE HG22 H N N 222 ILE HG23 H N N 223 ILE HD11 H N N 224 ILE HD12 H N N 225 ILE HD13 H N N 226 ILE HXT H N N 227 LEU N N N N 228 LEU CA C N S 229 LEU C C N N 230 LEU O O N N 231 LEU CB C N N 232 LEU CG C N N 233 LEU CD1 C N N 234 LEU CD2 C N N 235 LEU OXT O N N 236 LEU H H N N 237 LEU H2 H N N 238 LEU HA H N N 239 LEU HB2 H N N 240 LEU HB3 H N N 241 LEU HG H N N 242 LEU HD11 H N N 243 LEU HD12 H N N 244 LEU HD13 H N N 245 LEU HD21 H N N 246 LEU HD22 H N N 247 LEU HD23 H N N 248 LEU HXT H N N 249 LYS N N N N 250 LYS CA C N S 251 LYS C C N N 252 LYS O O N N 253 LYS CB C N N 254 LYS CG C N N 255 LYS CD C N N 256 LYS CE C N N 257 LYS NZ N N N 258 LYS OXT O N N 259 LYS H H N N 260 LYS H2 H N N 261 LYS HA H N N 262 LYS HB2 H N N 263 LYS HB3 H N N 264 LYS HG2 H N N 265 LYS HG3 H N N 266 LYS HD2 H N N 267 LYS HD3 H N N 268 LYS HE2 H N N 269 LYS HE3 H N N 270 LYS HZ1 H N N 271 LYS HZ2 H N N 272 LYS HZ3 H N N 273 LYS HXT H N N 274 MET N N N N 275 MET CA C N S 276 MET C C N N 277 MET O O N N 278 MET CB C N N 279 MET CG C N N 280 MET SD S N N 281 MET CE C N N 282 MET OXT O N N 283 MET H H N N 284 MET H2 H N N 285 MET HA H N N 286 MET HB2 H N N 287 MET HB3 H N N 288 MET HG2 H N N 289 MET HG3 H N N 290 MET HE1 H N N 291 MET HE2 H N N 292 MET HE3 H N N 293 MET HXT H N N 294 PHE N N N N 295 PHE CA C N S 296 PHE C C N N 297 PHE O O N N 298 PHE CB C N N 299 PHE CG C Y N 300 PHE CD1 C Y N 301 PHE CD2 C Y N 302 PHE CE1 C Y N 303 PHE CE2 C Y N 304 PHE CZ C Y N 305 PHE OXT O N N 306 PHE H H N N 307 PHE H2 H N N 308 PHE HA H N N 309 PHE HB2 H N N 310 PHE HB3 H N N 311 PHE HD1 H N N 312 PHE HD2 H N N 313 PHE HE1 H N N 314 PHE HE2 H N N 315 PHE HZ H N N 316 PHE HXT H N N 317 PRO N N N N 318 PRO CA C N S 319 PRO C C N N 320 PRO O O N N 321 PRO CB C N N 322 PRO CG C N N 323 PRO CD C N N 324 PRO OXT O N N 325 PRO H H N N 326 PRO HA H N N 327 PRO HB2 H N N 328 PRO HB3 H N N 329 PRO HG2 H N N 330 PRO HG3 H N N 331 PRO HD2 H N N 332 PRO HD3 H N N 333 PRO HXT H N N 334 SER N N N N 335 SER CA C N S 336 SER C C N N 337 SER O O N N 338 SER CB C N N 339 SER OG O N N 340 SER OXT O N N 341 SER H H N N 342 SER H2 H N N 343 SER HA H N N 344 SER HB2 H N N 345 SER HB3 H N N 346 SER HG H N N 347 SER HXT H N N 348 THR N N N N 349 THR CA C N S 350 THR C C N N 351 THR O O N N 352 THR CB C N R 353 THR OG1 O N N 354 THR CG2 C N N 355 THR OXT O N N 356 THR H H N N 357 THR H2 H N N 358 THR HA H N N 359 THR HB H N N 360 THR HG1 H N N 361 THR HG21 H N N 362 THR HG22 H N N 363 THR HG23 H N N 364 THR HXT H N N 365 TRP N N N N 366 TRP CA C N S 367 TRP C C N N 368 TRP O O N N 369 TRP CB C N N 370 TRP CG C Y N 371 TRP CD1 C Y N 372 TRP CD2 C Y N 373 TRP NE1 N Y N 374 TRP CE2 C Y N 375 TRP CE3 C Y N 376 TRP CZ2 C Y N 377 TRP CZ3 C Y N 378 TRP CH2 C Y N 379 TRP OXT O N N 380 TRP H H N N 381 TRP H2 H N N 382 TRP HA H N N 383 TRP HB2 H N N 384 TRP HB3 H N N 385 TRP HD1 H N N 386 TRP HE1 H N N 387 TRP HE3 H N N 388 TRP HZ2 H N N 389 TRP HZ3 H N N 390 TRP HH2 H N N 391 TRP HXT H N N 392 TYR N N N N 393 TYR CA C N S 394 TYR C C N N 395 TYR O O N N 396 TYR CB C N N 397 TYR CG C Y N 398 TYR CD1 C Y N 399 TYR CD2 C Y N 400 TYR CE1 C Y N 401 TYR CE2 C Y N 402 TYR CZ C Y N 403 TYR OH O N N 404 TYR OXT O N N 405 TYR H H N N 406 TYR H2 H N N 407 TYR HA H N N 408 TYR HB2 H N N 409 TYR HB3 H N N 410 TYR HD1 H N N 411 TYR HD2 H N N 412 TYR HE1 H N N 413 TYR HE2 H N N 414 TYR HH H N N 415 TYR HXT H N N 416 VAL N N N N 417 VAL CA C N S 418 VAL C C N N 419 VAL O O N N 420 VAL CB C N N 421 VAL CG1 C N N 422 VAL CG2 C N N 423 VAL OXT O N N 424 VAL H H N N 425 VAL H2 H N N 426 VAL HA H N N 427 VAL HB H N N 428 VAL HG11 H N N 429 VAL HG12 H N N 430 VAL HG13 H N N 431 VAL HG21 H N N 432 VAL HG22 H N N 433 VAL HG23 H N N 434 VAL HXT H N N 435 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BTK C O doub N N 70 BTK C CA sing N N 71 BTK C OXT sing N N 72 BTK N CA sing N N 73 BTK N H sing N N 74 BTK N H2 sing N N 75 BTK CA CB sing N N 76 BTK CA HA sing N N 77 BTK CB CG sing N N 78 BTK CB HB2 sing N N 79 BTK CB HB3 sing N N 80 BTK CD CE sing N N 81 BTK CD CG sing N N 82 BTK CD HD2 sing N N 83 BTK CD HD3 sing N N 84 BTK CE NZ sing N N 85 BTK CE HE2 sing N N 86 BTK CE HE3 sing N N 87 BTK CG HG2 sing N N 88 BTK CG HG3 sing N N 89 BTK NZ CAN sing N N 90 BTK NZ HNZ sing N N 91 BTK CAA CAF sing N N 92 BTK CAA HAA sing N N 93 BTK CAA HAAA sing N N 94 BTK CAA HAAB sing N N 95 BTK OAD CAN doub N N 96 BTK CAF CAJ sing N N 97 BTK CAF HAF sing N N 98 BTK CAF HAFA sing N N 99 BTK CAJ CAN sing N N 100 BTK CAJ HAJ sing N N 101 BTK CAJ HAJA sing N N 102 BTK OXT HXT sing N N 103 CYS N CA sing N N 104 CYS N H sing N N 105 CYS N H2 sing N N 106 CYS CA C sing N N 107 CYS CA CB sing N N 108 CYS CA HA sing N N 109 CYS C O doub N N 110 CYS C OXT sing N N 111 CYS CB SG sing N N 112 CYS CB HB2 sing N N 113 CYS CB HB3 sing N N 114 CYS SG HG sing N N 115 CYS OXT HXT sing N N 116 EDO C1 O1 sing N N 117 EDO C1 C2 sing N N 118 EDO C1 H11 sing N N 119 EDO C1 H12 sing N N 120 EDO O1 HO1 sing N N 121 EDO C2 O2 sing N N 122 EDO C2 H21 sing N N 123 EDO C2 H22 sing N N 124 EDO O2 HO2 sing N N 125 GLN N CA sing N N 126 GLN N H sing N N 127 GLN N H2 sing N N 128 GLN CA C sing N N 129 GLN CA CB sing N N 130 GLN CA HA sing N N 131 GLN C O doub N N 132 GLN C OXT sing N N 133 GLN CB CG sing N N 134 GLN CB HB2 sing N N 135 GLN CB HB3 sing N N 136 GLN CG CD sing N N 137 GLN CG HG2 sing N N 138 GLN CG HG3 sing N N 139 GLN CD OE1 doub N N 140 GLN CD NE2 sing N N 141 GLN NE2 HE21 sing N N 142 GLN NE2 HE22 sing N N 143 GLN OXT HXT sing N N 144 GLU N CA sing N N 145 GLU N H sing N N 146 GLU N H2 sing N N 147 GLU CA C sing N N 148 GLU CA CB sing N N 149 GLU CA HA sing N N 150 GLU C O doub N N 151 GLU C OXT sing N N 152 GLU CB CG sing N N 153 GLU CB HB2 sing N N 154 GLU CB HB3 sing N N 155 GLU CG CD sing N N 156 GLU CG HG2 sing N N 157 GLU CG HG3 sing N N 158 GLU CD OE1 doub N N 159 GLU CD OE2 sing N N 160 GLU OE2 HE2 sing N N 161 GLU OXT HXT sing N N 162 GLY N CA sing N N 163 GLY N H sing N N 164 GLY N H2 sing N N 165 GLY CA C sing N N 166 GLY CA HA2 sing N N 167 GLY CA HA3 sing N N 168 GLY C O doub N N 169 GLY C OXT sing N N 170 GLY OXT HXT sing N N 171 HIS N CA sing N N 172 HIS N H sing N N 173 HIS N H2 sing N N 174 HIS CA C sing N N 175 HIS CA CB sing N N 176 HIS CA HA sing N N 177 HIS C O doub N N 178 HIS C OXT sing N N 179 HIS CB CG sing N N 180 HIS CB HB2 sing N N 181 HIS CB HB3 sing N N 182 HIS CG ND1 sing Y N 183 HIS CG CD2 doub Y N 184 HIS ND1 CE1 doub Y N 185 HIS ND1 HD1 sing N N 186 HIS CD2 NE2 sing Y N 187 HIS CD2 HD2 sing N N 188 HIS CE1 NE2 sing Y N 189 HIS CE1 HE1 sing N N 190 HIS NE2 HE2 sing N N 191 HIS OXT HXT sing N N 192 HOH O H1 sing N N 193 HOH O H2 sing N N 194 ILE N CA sing N N 195 ILE N H sing N N 196 ILE N H2 sing N N 197 ILE CA C sing N N 198 ILE CA CB sing N N 199 ILE CA HA sing N N 200 ILE C O doub N N 201 ILE C OXT sing N N 202 ILE CB CG1 sing N N 203 ILE CB CG2 sing N N 204 ILE CB HB sing N N 205 ILE CG1 CD1 sing N N 206 ILE CG1 HG12 sing N N 207 ILE CG1 HG13 sing N N 208 ILE CG2 HG21 sing N N 209 ILE CG2 HG22 sing N N 210 ILE CG2 HG23 sing N N 211 ILE CD1 HD11 sing N N 212 ILE CD1 HD12 sing N N 213 ILE CD1 HD13 sing N N 214 ILE OXT HXT sing N N 215 LEU N CA sing N N 216 LEU N H sing N N 217 LEU N H2 sing N N 218 LEU CA C sing N N 219 LEU CA CB sing N N 220 LEU CA HA sing N N 221 LEU C O doub N N 222 LEU C OXT sing N N 223 LEU CB CG sing N N 224 LEU CB HB2 sing N N 225 LEU CB HB3 sing N N 226 LEU CG CD1 sing N N 227 LEU CG CD2 sing N N 228 LEU CG HG sing N N 229 LEU CD1 HD11 sing N N 230 LEU CD1 HD12 sing N N 231 LEU CD1 HD13 sing N N 232 LEU CD2 HD21 sing N N 233 LEU CD2 HD22 sing N N 234 LEU CD2 HD23 sing N N 235 LEU OXT HXT sing N N 236 LYS N CA sing N N 237 LYS N H sing N N 238 LYS N H2 sing N N 239 LYS CA C sing N N 240 LYS CA CB sing N N 241 LYS CA HA sing N N 242 LYS C O doub N N 243 LYS C OXT sing N N 244 LYS CB CG sing N N 245 LYS CB HB2 sing N N 246 LYS CB HB3 sing N N 247 LYS CG CD sing N N 248 LYS CG HG2 sing N N 249 LYS CG HG3 sing N N 250 LYS CD CE sing N N 251 LYS CD HD2 sing N N 252 LYS CD HD3 sing N N 253 LYS CE NZ sing N N 254 LYS CE HE2 sing N N 255 LYS CE HE3 sing N N 256 LYS NZ HZ1 sing N N 257 LYS NZ HZ2 sing N N 258 LYS NZ HZ3 sing N N 259 LYS OXT HXT sing N N 260 MET N CA sing N N 261 MET N H sing N N 262 MET N H2 sing N N 263 MET CA C sing N N 264 MET CA CB sing N N 265 MET CA HA sing N N 266 MET C O doub N N 267 MET C OXT sing N N 268 MET CB CG sing N N 269 MET CB HB2 sing N N 270 MET CB HB3 sing N N 271 MET CG SD sing N N 272 MET CG HG2 sing N N 273 MET CG HG3 sing N N 274 MET SD CE sing N N 275 MET CE HE1 sing N N 276 MET CE HE2 sing N N 277 MET CE HE3 sing N N 278 MET OXT HXT sing N N 279 PHE N CA sing N N 280 PHE N H sing N N 281 PHE N H2 sing N N 282 PHE CA C sing N N 283 PHE CA CB sing N N 284 PHE CA HA sing N N 285 PHE C O doub N N 286 PHE C OXT sing N N 287 PHE CB CG sing N N 288 PHE CB HB2 sing N N 289 PHE CB HB3 sing N N 290 PHE CG CD1 doub Y N 291 PHE CG CD2 sing Y N 292 PHE CD1 CE1 sing Y N 293 PHE CD1 HD1 sing N N 294 PHE CD2 CE2 doub Y N 295 PHE CD2 HD2 sing N N 296 PHE CE1 CZ doub Y N 297 PHE CE1 HE1 sing N N 298 PHE CE2 CZ sing Y N 299 PHE CE2 HE2 sing N N 300 PHE CZ HZ sing N N 301 PHE OXT HXT sing N N 302 PRO N CA sing N N 303 PRO N CD sing N N 304 PRO N H sing N N 305 PRO CA C sing N N 306 PRO CA CB sing N N 307 PRO CA HA sing N N 308 PRO C O doub N N 309 PRO C OXT sing N N 310 PRO CB CG sing N N 311 PRO CB HB2 sing N N 312 PRO CB HB3 sing N N 313 PRO CG CD sing N N 314 PRO CG HG2 sing N N 315 PRO CG HG3 sing N N 316 PRO CD HD2 sing N N 317 PRO CD HD3 sing N N 318 PRO OXT HXT sing N N 319 SER N CA sing N N 320 SER N H sing N N 321 SER N H2 sing N N 322 SER CA C sing N N 323 SER CA CB sing N N 324 SER CA HA sing N N 325 SER C O doub N N 326 SER C OXT sing N N 327 SER CB OG sing N N 328 SER CB HB2 sing N N 329 SER CB HB3 sing N N 330 SER OG HG sing N N 331 SER OXT HXT sing N N 332 THR N CA sing N N 333 THR N H sing N N 334 THR N H2 sing N N 335 THR CA C sing N N 336 THR CA CB sing N N 337 THR CA HA sing N N 338 THR C O doub N N 339 THR C OXT sing N N 340 THR CB OG1 sing N N 341 THR CB CG2 sing N N 342 THR CB HB sing N N 343 THR OG1 HG1 sing N N 344 THR CG2 HG21 sing N N 345 THR CG2 HG22 sing N N 346 THR CG2 HG23 sing N N 347 THR OXT HXT sing N N 348 TRP N CA sing N N 349 TRP N H sing N N 350 TRP N H2 sing N N 351 TRP CA C sing N N 352 TRP CA CB sing N N 353 TRP CA HA sing N N 354 TRP C O doub N N 355 TRP C OXT sing N N 356 TRP CB CG sing N N 357 TRP CB HB2 sing N N 358 TRP CB HB3 sing N N 359 TRP CG CD1 doub Y N 360 TRP CG CD2 sing Y N 361 TRP CD1 NE1 sing Y N 362 TRP CD1 HD1 sing N N 363 TRP CD2 CE2 doub Y N 364 TRP CD2 CE3 sing Y N 365 TRP NE1 CE2 sing Y N 366 TRP NE1 HE1 sing N N 367 TRP CE2 CZ2 sing Y N 368 TRP CE3 CZ3 doub Y N 369 TRP CE3 HE3 sing N N 370 TRP CZ2 CH2 doub Y N 371 TRP CZ2 HZ2 sing N N 372 TRP CZ3 CH2 sing Y N 373 TRP CZ3 HZ3 sing N N 374 TRP CH2 HH2 sing N N 375 TRP OXT HXT sing N N 376 TYR N CA sing N N 377 TYR N H sing N N 378 TYR N H2 sing N N 379 TYR CA C sing N N 380 TYR CA CB sing N N 381 TYR CA HA sing N N 382 TYR C O doub N N 383 TYR C OXT sing N N 384 TYR CB CG sing N N 385 TYR CB HB2 sing N N 386 TYR CB HB3 sing N N 387 TYR CG CD1 doub Y N 388 TYR CG CD2 sing Y N 389 TYR CD1 CE1 sing Y N 390 TYR CD1 HD1 sing N N 391 TYR CD2 CE2 doub Y N 392 TYR CD2 HD2 sing N N 393 TYR CE1 CZ doub Y N 394 TYR CE1 HE1 sing N N 395 TYR CE2 CZ sing Y N 396 TYR CE2 HE2 sing N N 397 TYR CZ OH sing N N 398 TYR OH HH sing N N 399 TYR OXT HXT sing N N 400 VAL N CA sing N N 401 VAL N H sing N N 402 VAL N H2 sing N N 403 VAL CA C sing N N 404 VAL CA CB sing N N 405 VAL CA HA sing N N 406 VAL C O doub N N 407 VAL C OXT sing N N 408 VAL CB CG1 sing N N 409 VAL CB CG2 sing N N 410 VAL CB HB sing N N 411 VAL CG1 HG11 sing N N 412 VAL CG1 HG12 sing N N 413 VAL CG1 HG13 sing N N 414 VAL CG2 HG21 sing N N 415 VAL CG2 HG22 sing N N 416 VAL CG2 HG23 sing N N 417 VAL OXT HXT sing N N 418 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 1,2-ETHANEDIOL EDO 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3JVJ _pdbx_initial_refinement_model.details 'PDB ENTRY 3JVJ' #