HEADER LYASE 04-MAY-10 3MVE TITLE CRYSTAL STRUCTURE OF A NOVEL PYRUVATE DECARBOXYLASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: UPF0255 PROTEIN VV1_0328; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: FRSA; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO VULNIFICUS; SOURCE 3 ORGANISM_TAXID: 672; SOURCE 4 STRAIN: M06-24/0; SOURCE 5 GENE: FRSA, VV1_0328; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: JM109; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PQE30 KEYWDS FRSA, FERMENTATION/RESPIRATION SWITCH PROTEIN, HYDROLASE ACTIVATOR, KEYWDS 2 LYASE EXPDTA X-RAY DIFFRACTION AUTHOR S.S.CHA,C.S.JEONG,Y.J.AN REVDAT 5 20-MAR-24 3MVE 1 REMARK REVDAT 4 17-DEC-14 3MVE 1 REMARK VERSN REVDAT 3 29-JUN-11 3MVE 1 JRNL REVDAT 2 08-JUN-11 3MVE 1 JRNL REVDAT 1 18-MAY-11 3MVE 0 JRNL AUTH K.J.LEE,C.S.JEONG,Y.J.AN,H.J.LEE,S.J.PARK,Y.J.SEOK,P.KIM, JRNL AUTH 2 J.H.LEE,K.H.LEE,S.S.CHA JRNL TITL FRSA FUNCTIONS AS A COFACTOR-INDEPENDENT DECARBOXYLASE TO JRNL TITL 2 CONTROL METABOLIC FLUX. JRNL REF NAT.CHEM.BIOL. V. 7 434 2011 JRNL REFN ISSN 1552-4450 JRNL PMID 21623357 JRNL DOI 10.1038/NCHEMBIO.589 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.63 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.100 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 80851.970 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.8 REMARK 3 NUMBER OF REFLECTIONS : 39288 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1962 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.34 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5805 REMARK 3 BIN R VALUE (WORKING SET) : 0.1950 REMARK 3 BIN FREE R VALUE : 0.2470 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 303 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.014 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6136 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 65 REMARK 3 SOLVENT ATOMS : 304 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.56000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : -2.56000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.72000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.22 REMARK 3 ESD FROM SIGMAA (A) : 0.14 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.28 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.21 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.780 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 41.07 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : EDO.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ION.TOP REMARK 3 TOPOLOGY FILE 3 : WATER_REP.TOP REMARK 3 TOPOLOGY FILE 4 : EDO.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3MVE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-MAY-10. REMARK 100 THE DEPOSITION ID IS D_1000059041. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99999 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41404 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.180 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06900 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.18 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8M AM-SULFATE, 0.1M TRIS-HCL (PH REMARK 280 8.5), 0.2M NA-ACETATE, MICRO BATH, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 44.10050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLU A 3 REMARK 465 GLU A 4 REMARK 465 VAL A 5 REMARK 465 SER A 6 REMARK 465 LYS A 7 REMARK 465 ASN A 8 REMARK 465 LEU A 9 REMARK 465 SER A 10 REMARK 465 GLU A 11 REMARK 465 THR A 12 REMARK 465 LEU A 13 REMARK 465 PHE A 14 REMARK 465 VAL A 15 REMARK 465 LYS A 16 REMARK 465 HIS A 17 REMARK 465 LYS A 18 REMARK 465 GLN A 19 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLU B 3 REMARK 465 GLU B 4 REMARK 465 VAL B 5 REMARK 465 SER B 6 REMARK 465 LYS B 7 REMARK 465 ASN B 8 REMARK 465 LEU B 9 REMARK 465 SER B 10 REMARK 465 GLU B 11 REMARK 465 THR B 12 REMARK 465 LEU B 13 REMARK 465 PHE B 14 REMARK 465 VAL B 15 REMARK 465 LYS B 16 REMARK 465 HIS B 17 REMARK 465 LYS B 18 REMARK 465 GLN B 19 REMARK 465 ALA B 20 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 21 CG CD CE NZ REMARK 470 LYS A 43 CG CD CE NZ REMARK 470 ARG A 53 CG CD NE CZ NH1 NH2 REMARK 470 TRP A 57 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 57 CZ3 CH2 REMARK 470 ARG A 104 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 141 CG CD CE NZ REMARK 470 LYS A 179 CG CD CE NZ REMARK 470 LYS A 219 CG CD CE NZ REMARK 470 GLU A 242 CG CD OE1 OE2 REMARK 470 ARG A 352 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 355 CG CD CE NZ REMARK 470 LYS A 385 CG CD CE NZ REMARK 470 ILE A 394 CG1 CG2 CD1 REMARK 470 GLU A 399 CG CD OE1 OE2 REMARK 470 GLN A 400 CG CD OE1 NE2 REMARK 470 ASP A 403 CG OD1 OD2 REMARK 470 LYS A 407 CG CD CE NZ REMARK 470 LYS B 21 CG CD CE NZ REMARK 470 GLU B 42 CG CD OE1 OE2 REMARK 470 LYS B 43 CG CD CE NZ REMARK 470 ARG B 104 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 111 CG CD CE NZ REMARK 470 ARG B 112 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 115 CG CD OE1 OE2 REMARK 470 GLU B 119 CG CD OE1 OE2 REMARK 470 LYS B 179 CG CD CE NZ REMARK 470 LYS B 219 CG CD CE NZ REMARK 470 SER B 351 OG REMARK 470 ARG B 352 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 363 CG CD1 CD2 REMARK 470 GLU B 364 CG CD OE1 OE2 REMARK 470 LYS B 385 CG CD CE NZ REMARK 470 LYS B 387 CG CD CE NZ REMARK 470 LYS B 388 CG CD CE NZ REMARK 470 LYS B 392 CG CD CE NZ REMARK 470 LEU B 402 CG CD1 CD2 REMARK 470 LEU B 404 CG CD1 CD2 REMARK 470 LYS B 407 CG CD CE NZ REMARK 470 GLU B 410 CG CD OE1 OE2 REMARK 470 ARG B 415 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 118 -133.62 50.83 REMARK 500 HIS A 216 -63.13 -124.94 REMARK 500 SER A 231 0.88 81.74 REMARK 500 THR A 241 -160.80 -67.97 REMARK 500 ARG A 272 -131.08 51.54 REMARK 500 HIS A 300 -51.50 -152.13 REMARK 500 LEU A 349 73.60 -104.02 REMARK 500 SER A 350 -51.72 -158.50 REMARK 500 SER A 351 -107.44 -88.06 REMARK 500 SER A 390 -5.78 -53.26 REMARK 500 LYS B 191 157.58 178.55 REMARK 500 HIS B 216 -80.83 -131.49 REMARK 500 SER B 231 -0.10 85.71 REMARK 500 THR B 241 175.81 63.32 REMARK 500 ASP B 243 65.25 -103.91 REMARK 500 ARG B 272 -127.42 54.35 REMARK 500 HIS B 300 -57.52 -154.69 REMARK 500 SER B 327 -76.62 -69.84 REMARK 500 SER B 350 -57.11 -148.91 REMARK 500 SER B 351 -111.28 -87.24 REMARK 500 TYR B 383 17.09 86.97 REMARK 500 LYS B 392 -27.64 73.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 416 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 417 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 418 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 419 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 420 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 421 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 422 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 423 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 424 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 416 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 417 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 418 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 419 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 420 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 421 DBREF 3MVE A 1 415 UNP Q8DF91 Y328_VIBVU 1 415 DBREF 3MVE B 1 415 UNP Q8DF91 Y328_VIBVU 1 415 SEQRES 1 A 415 MET SER GLU GLU VAL SER LYS ASN LEU SER GLU THR LEU SEQRES 2 A 415 PHE VAL LYS HIS LYS GLN ALA LYS GLU THR SER ALA LEU SEQRES 3 A 415 THR GLN TYR MET PRO THR SER GLN SER LEU LEU ASP GLU SEQRES 4 A 415 ILE LYS GLU LYS ASN GLY PHE SER TRP TYR ARG ASN LEU SEQRES 5 A 415 ARG ARG LEU GLN TRP VAL TRP GLN GLY VAL ASP PRO ILE SEQRES 6 A 415 GLU GLN GLU GLN VAL LEU ALA ARG ILE ALA SER SER LYS SEQRES 7 A 415 HIS SER ARG THR ASP GLU GLN TRP LEU ASP THR VAL MET SEQRES 8 A 415 GLY TYR HIS SER GLY ASN TRP ALA TYR GLU TRP THR ARG SEQRES 9 A 415 LEU GLY MET GLU HIS GLN LYS ARG ALA GLY GLU MET THR SEQRES 10 A 415 ASN GLU ALA ALA SER GLU ALA LEU PHE SER ALA SER LEU SEQRES 11 A 415 CYS TYR SER ILE ALA GLY TYR PRO HIS LEU LYS SER ASP SEQRES 12 A 415 ASN LEU ALA ILE GLN ALA GLN VAL LEU ALA ASN SER ALA SEQRES 13 A 415 TYR LEU GLU ALA ALA LYS LYS SER LYS TYR ILE ILE LYS SEQRES 14 A 415 GLN LEU GLU ILE PRO PHE GLU LYS GLY LYS ILE THR ALA SEQRES 15 A 415 HIS LEU HIS LEU THR ASN THR ASP LYS PRO HIS PRO VAL SEQRES 16 A 415 VAL ILE VAL SER ALA GLY LEU ASP SER LEU GLN THR ASP SEQRES 17 A 415 MET TRP ARG LEU PHE ARG ASP HIS LEU ALA LYS HIS ASP SEQRES 18 A 415 ILE ALA MET LEU THR VAL ASP MET PRO SER VAL GLY TYR SEQRES 19 A 415 SER SER LYS TYR PRO LEU THR GLU ASP TYR SER ARG LEU SEQRES 20 A 415 HIS GLN ALA VAL LEU ASN GLU LEU PHE SER ILE PRO TYR SEQRES 21 A 415 VAL ASP HIS HIS ARG VAL GLY LEU ILE GLY PHE ARG PHE SEQRES 22 A 415 GLY GLY ASN ALA MET VAL ARG LEU SER PHE LEU GLU GLN SEQRES 23 A 415 GLU LYS ILE LYS ALA CYS VAL ILE LEU GLY ALA PRO ILE SEQRES 24 A 415 HIS ASP ILE PHE ALA SER PRO GLN LYS LEU GLN GLN MET SEQRES 25 A 415 PRO LYS MET TYR LEU ASP VAL LEU ALA SER ARG LEU GLY SEQRES 26 A 415 LYS SER VAL VAL ASP ILE TYR SER LEU SER GLY GLN MET SEQRES 27 A 415 ALA ALA TRP SER LEU LYS VAL GLN GLY PHE LEU SER SER SEQRES 28 A 415 ARG LYS THR LYS VAL PRO ILE LEU ALA MET SER LEU GLU SEQRES 29 A 415 GLY ASP PRO VAL SER PRO TYR SER ASP ASN GLN MET VAL SEQRES 30 A 415 ALA PHE PHE SER THR TYR GLY LYS ALA LYS LYS ILE SER SEQRES 31 A 415 SER LYS THR ILE THR GLN GLY TYR GLU GLN SER LEU ASP SEQRES 32 A 415 LEU ALA ILE LYS TRP LEU GLU ASP GLU LEU LEU ARG SEQRES 1 B 415 MET SER GLU GLU VAL SER LYS ASN LEU SER GLU THR LEU SEQRES 2 B 415 PHE VAL LYS HIS LYS GLN ALA LYS GLU THR SER ALA LEU SEQRES 3 B 415 THR GLN TYR MET PRO THR SER GLN SER LEU LEU ASP GLU SEQRES 4 B 415 ILE LYS GLU LYS ASN GLY PHE SER TRP TYR ARG ASN LEU SEQRES 5 B 415 ARG ARG LEU GLN TRP VAL TRP GLN GLY VAL ASP PRO ILE SEQRES 6 B 415 GLU GLN GLU GLN VAL LEU ALA ARG ILE ALA SER SER LYS SEQRES 7 B 415 HIS SER ARG THR ASP GLU GLN TRP LEU ASP THR VAL MET SEQRES 8 B 415 GLY TYR HIS SER GLY ASN TRP ALA TYR GLU TRP THR ARG SEQRES 9 B 415 LEU GLY MET GLU HIS GLN LYS ARG ALA GLY GLU MET THR SEQRES 10 B 415 ASN GLU ALA ALA SER GLU ALA LEU PHE SER ALA SER LEU SEQRES 11 B 415 CYS TYR SER ILE ALA GLY TYR PRO HIS LEU LYS SER ASP SEQRES 12 B 415 ASN LEU ALA ILE GLN ALA GLN VAL LEU ALA ASN SER ALA SEQRES 13 B 415 TYR LEU GLU ALA ALA LYS LYS SER LYS TYR ILE ILE LYS SEQRES 14 B 415 GLN LEU GLU ILE PRO PHE GLU LYS GLY LYS ILE THR ALA SEQRES 15 B 415 HIS LEU HIS LEU THR ASN THR ASP LYS PRO HIS PRO VAL SEQRES 16 B 415 VAL ILE VAL SER ALA GLY LEU ASP SER LEU GLN THR ASP SEQRES 17 B 415 MET TRP ARG LEU PHE ARG ASP HIS LEU ALA LYS HIS ASP SEQRES 18 B 415 ILE ALA MET LEU THR VAL ASP MET PRO SER VAL GLY TYR SEQRES 19 B 415 SER SER LYS TYR PRO LEU THR GLU ASP TYR SER ARG LEU SEQRES 20 B 415 HIS GLN ALA VAL LEU ASN GLU LEU PHE SER ILE PRO TYR SEQRES 21 B 415 VAL ASP HIS HIS ARG VAL GLY LEU ILE GLY PHE ARG PHE SEQRES 22 B 415 GLY GLY ASN ALA MET VAL ARG LEU SER PHE LEU GLU GLN SEQRES 23 B 415 GLU LYS ILE LYS ALA CYS VAL ILE LEU GLY ALA PRO ILE SEQRES 24 B 415 HIS ASP ILE PHE ALA SER PRO GLN LYS LEU GLN GLN MET SEQRES 25 B 415 PRO LYS MET TYR LEU ASP VAL LEU ALA SER ARG LEU GLY SEQRES 26 B 415 LYS SER VAL VAL ASP ILE TYR SER LEU SER GLY GLN MET SEQRES 27 B 415 ALA ALA TRP SER LEU LYS VAL GLN GLY PHE LEU SER SER SEQRES 28 B 415 ARG LYS THR LYS VAL PRO ILE LEU ALA MET SER LEU GLU SEQRES 29 B 415 GLY ASP PRO VAL SER PRO TYR SER ASP ASN GLN MET VAL SEQRES 30 B 415 ALA PHE PHE SER THR TYR GLY LYS ALA LYS LYS ILE SER SEQRES 31 B 415 SER LYS THR ILE THR GLN GLY TYR GLU GLN SER LEU ASP SEQRES 32 B 415 LEU ALA ILE LYS TRP LEU GLU ASP GLU LEU LEU ARG HET SO4 A 416 5 HET EDO A 417 4 HET EDO A 418 4 HET EDO A 419 4 HET EDO A 420 4 HET EDO A 421 4 HET EDO A 422 4 HET EDO A 423 4 HET EDO A 424 4 HET SO4 B 416 5 HET SO4 B 417 5 HET SO4 B 418 5 HET SO4 B 419 5 HET EDO B 420 4 HET EDO B 421 4 HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 SO4 5(O4 S 2-) FORMUL 4 EDO 10(C2 H6 O2) FORMUL 18 HOH *304(H2 O) HELIX 1 1 GLU A 22 LEU A 26 5 5 HELIX 2 2 MET A 30 GLY A 45 1 16 HELIX 3 3 ASN A 51 GLN A 56 1 6 HELIX 4 4 TRP A 57 GLY A 61 5 5 HELIX 5 5 ASP A 63 SER A 77 1 15 HELIX 6 6 ASN A 97 GLY A 114 1 18 HELIX 7 7 THR A 117 TYR A 137 1 21 HELIX 8 8 ASP A 143 SER A 164 1 22 HELIX 9 9 LEU A 205 ASP A 208 5 4 HELIX 10 10 MET A 209 HIS A 216 1 8 HELIX 11 11 LEU A 217 ASP A 221 5 5 HELIX 12 12 VAL A 232 SER A 236 5 5 HELIX 13 13 SER A 245 LEU A 255 1 11 HELIX 14 14 PHE A 256 ILE A 258 5 3 HELIX 15 15 ARG A 272 GLU A 285 1 14 HELIX 16 16 HIS A 300 SER A 305 1 6 HELIX 17 17 SER A 305 GLN A 310 1 6 HELIX 18 18 PRO A 313 LEU A 324 1 12 HELIX 19 19 ASP A 330 MET A 338 1 9 HELIX 20 20 ALA A 339 SER A 342 5 4 HELIX 21 21 PRO A 370 PHE A 380 1 11 HELIX 22 22 THR A 393 LEU A 414 1 22 HELIX 23 23 GLU B 22 LEU B 26 5 5 HELIX 24 24 MET B 30 GLY B 45 1 16 HELIX 25 25 ARG B 53 GLN B 60 1 8 HELIX 26 26 ASP B 63 SER B 77 1 15 HELIX 27 27 ASN B 97 ALA B 113 1 17 HELIX 28 28 GLY B 114 MET B 116 5 3 HELIX 29 29 THR B 117 TYR B 137 1 21 HELIX 30 30 ASP B 143 SER B 164 1 22 HELIX 31 31 LEU B 205 ASP B 208 5 4 HELIX 32 32 MET B 209 ASP B 215 1 7 HELIX 33 33 HIS B 216 ASP B 221 5 6 HELIX 34 34 VAL B 232 SER B 236 5 5 HELIX 35 35 SER B 245 LEU B 255 1 11 HELIX 36 36 PHE B 256 ILE B 258 5 3 HELIX 37 37 ARG B 272 GLU B 285 1 14 HELIX 38 38 GLN B 286 ILE B 289 5 4 HELIX 39 39 HIS B 300 SER B 305 1 6 HELIX 40 40 SER B 305 GLN B 310 1 6 HELIX 41 41 PRO B 313 LEU B 324 1 12 HELIX 42 42 ASP B 330 MET B 338 1 9 HELIX 43 43 ALA B 339 SER B 342 5 4 HELIX 44 44 PRO B 370 PHE B 380 1 11 HELIX 45 45 GLY B 397 ARG B 415 1 19 SHEET 1 A 8 ILE A 167 PRO A 174 0 SHEET 2 A 8 LYS A 179 LEU A 186 -1 O ALA A 182 N LEU A 171 SHEET 3 A 8 ALA A 223 VAL A 227 -1 O MET A 224 N HIS A 185 SHEET 4 A 8 HIS A 193 SER A 199 1 N PRO A 194 O ALA A 223 SHEET 5 A 8 VAL A 261 PHE A 271 1 O PHE A 271 N SER A 199 SHEET 6 A 8 ALA A 291 LEU A 295 1 O VAL A 293 N LEU A 268 SHEET 7 A 8 ILE A 358 LEU A 363 1 O LEU A 359 N ILE A 294 SHEET 8 A 8 LYS A 385 ILE A 389 1 O LYS A 385 N ALA A 360 SHEET 1 B 2 GLN B 28 TYR B 29 0 SHEET 2 B 2 VAL B 328 VAL B 329 1 O VAL B 329 N GLN B 28 SHEET 1 C 8 ILE B 167 PHE B 175 0 SHEET 2 C 8 GLY B 178 LEU B 186 -1 O ALA B 182 N LEU B 171 SHEET 3 C 8 ALA B 223 VAL B 227 -1 O MET B 224 N HIS B 185 SHEET 4 C 8 HIS B 193 SER B 199 1 N VAL B 196 O LEU B 225 SHEET 5 C 8 VAL B 261 PHE B 271 1 O GLY B 267 N VAL B 195 SHEET 6 C 8 ALA B 291 LEU B 295 1 O VAL B 293 N LEU B 268 SHEET 7 C 8 ILE B 358 LEU B 363 1 O LEU B 359 N CYS B 292 SHEET 8 C 8 LYS B 385 ILE B 389 1 O LYS B 385 N ALA B 360 CISPEP 1 TYR A 137 PRO A 138 0 0.20 CISPEP 2 TYR B 137 PRO B 138 0 0.60 SITE 1 AC1 5 HIS A 79 SER A 80 HIS A 94 HOH A 521 SITE 2 AC1 5 HOH A 551 SITE 1 AC2 5 GLY A 201 LEU A 202 ARG A 272 PHE A 273 SITE 2 AC2 5 TYR A 316 SITE 1 AC3 8 TYR A 93 THR A 103 MET A 107 EDO A 419 SITE 2 AC3 8 HOH A 543 GLN B 110 SER B 155 HOH B 504 SITE 1 AC4 6 TYR A 93 THR A 103 LEU A 145 LEU A 152 SITE 2 AC4 6 EDO A 418 SER B 155 SITE 1 AC5 7 LEU A 125 GLU A 159 LYS A 162 LYS A 163 SITE 2 AC5 7 HOH A 554 GLY B 92 TYR B 93 SITE 1 AC6 4 PHE A 46 SER A 47 TRP A 48 HOH A 562 SITE 1 AC7 4 PHE A 283 GLY A 347 PHE A 348 ARG A 352 SITE 1 AC8 7 SER A 77 LYS A 78 HIS A 79 SER A 95 SITE 2 AC8 7 GLY A 96 HOH A 508 HOH A 571 SITE 1 AC9 10 LYS A 21 GLU A 22 THR A 23 ARG A 50 SITE 2 AC9 10 ASN A 97 TRP A 98 ALA A 99 LEU A 145 SITE 3 AC9 10 HOH A 505 HOH A 545 SITE 1 BC1 4 HIS B 79 SER B 80 HOH B 452 HOH B 453 SITE 1 BC2 6 GLY B 201 LEU B 202 ASP B 203 ARG B 272 SITE 2 BC2 6 PHE B 273 HOH B 522 SITE 1 BC3 3 LYS B 179 LYS B 237 HOH B 549 SITE 1 BC4 6 HIS B 216 HIS B 220 ILE B 222 ILE B 406 SITE 2 BC4 6 LYS B 407 GLU B 410 SITE 1 BC5 10 GLU B 22 THR B 23 ARG B 50 ASN B 97 SITE 2 BC5 10 ALA B 99 LEU B 145 HOH B 438 HOH B 456 SITE 3 BC5 10 HOH B 463 HOH B 565 SITE 1 BC6 7 VAL B 58 GLY B 61 VAL B 62 ASP B 63 SITE 2 BC6 7 ARG B 211 HOH B 449 HOH B 557 CRYST1 60.834 88.201 79.629 90.00 106.62 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016438 0.000000 0.004906 0.00000 SCALE2 0.000000 0.011338 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013106 0.00000