HEADER HYDROLASE 06-MAY-10 3MWQ TITLE CRYSTAL STRUCTURE OF RIBONUCLEASE A TANDEM ENZYMES AND THEIR TITLE 2 INTERACTION WITH THE CYTOSOLIC RIBONUCLEASE INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBONUCLEASE PANCREATIC, LINKER, RIBONUCLEASE PANCREATIC; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RNASE 1, RNASE A; COMPND 5 EC: 3.1.27.5; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_TAXID: 9913; SOURCE 4 GENE: RNS1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET26B(+) KEYWDS RIBONUCLEASE A TANDEM ENZYME, SGRSGRSG-LINKER, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.NEUMANN,F.LEICH REVDAT 4 30-OCT-24 3MWQ 1 REMARK REVDAT 3 01-NOV-23 3MWQ 1 REMARK REVDAT 2 28-JUN-17 3MWQ 1 SOURCE REVDAT 1 09-FEB-11 3MWQ 0 JRNL AUTH U.ARNOLD,F.LEICH,P.NEUMANN,H.LILIE,R.ULBRICH-HOFMANN JRNL TITL CRYSTAL STRUCTURE OF RNASE A TANDEM ENZYMES AND THEIR JRNL TITL 2 INTERACTION WITH THE CYTOSOLIC RIBONUCLEASE INHIBITOR JRNL REF FEBS J. V. 278 331 2011 JRNL REFN ISSN 1742-464X JRNL PMID 21134128 JRNL DOI 10.1111/J.1742-4658.2010.07957.X REMARK 2 REMARK 2 RESOLUTION. 1.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.420 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 26794 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1352 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.4620 - 3.6160 1.00 2774 151 0.1750 0.2120 REMARK 3 2 3.6160 - 2.8720 1.00 2681 171 0.1590 0.2160 REMARK 3 3 2.8720 - 2.5090 1.00 2674 142 0.1770 0.2030 REMARK 3 4 2.5090 - 2.2800 1.00 2667 138 0.1710 0.2210 REMARK 3 5 2.2800 - 2.1160 1.00 2648 159 0.1720 0.1870 REMARK 3 6 2.1160 - 1.9920 1.00 2669 137 0.1660 0.2260 REMARK 3 7 1.9920 - 1.8920 1.00 2636 152 0.1680 0.2350 REMARK 3 8 1.8920 - 1.8100 1.00 2656 124 0.1830 0.1930 REMARK 3 9 1.8100 - 1.7400 0.88 2332 104 0.1880 0.2650 REMARK 3 10 1.7400 - 1.6800 0.64 1705 74 0.2080 0.2620 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 61.42 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.78900 REMARK 3 B22 (A**2) : -4.42600 REMARK 3 B33 (A**2) : 3.63800 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.40300 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2076 REMARK 3 ANGLE : 0.909 2799 REMARK 3 CHIRALITY : 0.064 301 REMARK 3 PLANARITY : 0.004 368 REMARK 3 DIHEDRAL : 14.053 752 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (SEGID A AND RESID 1:15) REMARK 3 ORIGIN FOR THE GROUP (A): 32.2050 8.9806 10.7038 REMARK 3 T TENSOR REMARK 3 T11: 0.3253 T22: 0.2788 REMARK 3 T33: 0.1923 T12: 0.0725 REMARK 3 T13: 0.0959 T23: 0.0974 REMARK 3 L TENSOR REMARK 3 L11: 3.2458 L22: 2.2956 REMARK 3 L33: 4.0147 L12: -0.4462 REMARK 3 L13: -2.4182 L23: -2.8727 REMARK 3 S TENSOR REMARK 3 S11: 0.5825 S12: 0.6583 S13: 0.4781 REMARK 3 S21: -0.2422 S22: -0.2843 S23: -0.1078 REMARK 3 S31: -0.4877 S32: -0.2976 S33: -0.2739 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (SEGID A AND RESID 16:24) REMARK 3 ORIGIN FOR THE GROUP (A): 26.3033 -2.9486 -2.1710 REMARK 3 T TENSOR REMARK 3 T11: 0.5856 T22: 0.9916 REMARK 3 T33: 0.4524 T12: 0.2333 REMARK 3 T13: 0.0581 T23: 0.0473 REMARK 3 L TENSOR REMARK 3 L11: 1.6140 L22: 4.3955 REMARK 3 L33: -2.2288 L12: 0.1966 REMARK 3 L13: 0.5292 L23: 1.8334 REMARK 3 S TENSOR REMARK 3 S11: 0.0070 S12: 0.8039 S13: 0.0100 REMARK 3 S21: -0.4517 S22: 0.3910 S23: 0.0801 REMARK 3 S31: -0.2583 S32: 0.2029 S33: -0.3980 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (SEGID A AND RESID 25:42) REMARK 3 ORIGIN FOR THE GROUP (A): 38.8135 2.9431 1.4823 REMARK 3 T TENSOR REMARK 3 T11: 0.3616 T22: 0.4537 REMARK 3 T33: 0.1970 T12: 0.0890 REMARK 3 T13: 0.1623 T23: 0.0797 REMARK 3 L TENSOR REMARK 3 L11: 7.1655 L22: 3.7487 REMARK 3 L33: 1.0214 L12: 1.4959 REMARK 3 L13: -3.4286 L23: -1.4252 REMARK 3 S TENSOR REMARK 3 S11: 0.2352 S12: 0.9430 S13: -0.0160 REMARK 3 S21: -0.9952 S22: 0.1629 S23: -0.3998 REMARK 3 S31: -0.4080 S32: -0.5933 S33: -0.2233 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (SEGID A AND (RESID 43:86 OR RESID 98:124)) REMARK 3 ORIGIN FOR THE GROUP (A): 28.2342 -1.1300 16.3162 REMARK 3 T TENSOR REMARK 3 T11: 0.1461 T22: 0.1737 REMARK 3 T33: 0.1176 T12: -0.0106 REMARK 3 T13: 0.0007 T23: -0.0118 REMARK 3 L TENSOR REMARK 3 L11: 2.1897 L22: 0.7238 REMARK 3 L33: 1.3212 L12: -0.3415 REMARK 3 L13: -1.2485 L23: -0.7111 REMARK 3 S TENSOR REMARK 3 S11: -0.0526 S12: 0.3674 S13: -0.0950 REMARK 3 S21: -0.0351 S22: -0.0254 S23: -0.0520 REMARK 3 S31: -0.0212 S32: -0.3289 S33: 0.0679 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (SEGID A AND RESID 87:97) REMARK 3 ORIGIN FOR THE GROUP (A): 45.4240 -2.7221 -2.6553 REMARK 3 T TENSOR REMARK 3 T11: 0.4662 T22: 0.6279 REMARK 3 T33: 0.3657 T12: 0.0170 REMARK 3 T13: 0.1928 T23: -0.0725 REMARK 3 L TENSOR REMARK 3 L11: 0.7158 L22: 0.3375 REMARK 3 L33: -1.7569 L12: -0.4806 REMARK 3 L13: 0.7956 L23: 0.2735 REMARK 3 S TENSOR REMARK 3 S11: 0.1548 S12: 1.0943 S13: 0.0552 REMARK 3 S21: -0.5744 S22: -0.2448 S23: -0.1718 REMARK 3 S31: -0.0443 S32: -0.5635 S33: 0.1111 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (SEGID A AND RESID 125:134) REMARK 3 ORIGIN FOR THE GROUP (A): 25.6577 -14.7824 21.4090 REMARK 3 T TENSOR REMARK 3 T11: 0.4748 T22: 0.2949 REMARK 3 T33: 0.5738 T12: 0.0214 REMARK 3 T13: 0.0357 T23: -0.0826 REMARK 3 L TENSOR REMARK 3 L11: 2.8963 L22: 3.2929 REMARK 3 L33: 0.6197 L12: -0.3927 REMARK 3 L13: 1.2622 L23: 0.3348 REMARK 3 S TENSOR REMARK 3 S11: -0.1225 S12: -0.2139 S13: -0.8982 REMARK 3 S21: -0.6566 S22: 0.3085 S23: -0.2994 REMARK 3 S31: 0.1222 S32: 0.0157 S33: -0.1464 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (SEGID A AND RESID 135:146) REMARK 3 ORIGIN FOR THE GROUP (A): 15.2650 -3.9934 30.2914 REMARK 3 T TENSOR REMARK 3 T11: 0.1492 T22: 0.2499 REMARK 3 T33: 0.0931 T12: -0.0133 REMARK 3 T13: -0.0095 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 2.0795 L22: 0.7971 REMARK 3 L33: -0.5647 L12: 0.4103 REMARK 3 L13: 0.4028 L23: -0.8047 REMARK 3 S TENSOR REMARK 3 S11: -0.1557 S12: 0.7694 S13: 0.0124 REMARK 3 S21: -0.2653 S22: 0.1083 S23: -0.0810 REMARK 3 S31: 0.0929 S32: 0.1972 S33: 0.0091 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (SEGID A AND RESID 147:155) REMARK 3 ORIGIN FOR THE GROUP (A): 10.3932 10.0691 22.9242 REMARK 3 T TENSOR REMARK 3 T11: 0.4422 T22: 0.6906 REMARK 3 T33: 0.5808 T12: -0.1764 REMARK 3 T13: -0.1698 T23: 0.3465 REMARK 3 L TENSOR REMARK 3 L11: 0.2626 L22: 0.7656 REMARK 3 L33: -0.7726 L12: -0.2302 REMARK 3 L13: 0.5969 L23: 0.1047 REMARK 3 S TENSOR REMARK 3 S11: 0.2249 S12: 0.1272 S13: 0.2644 REMARK 3 S21: -0.0659 S22: 0.2148 S23: 0.3716 REMARK 3 S31: 0.0094 S32: -0.0954 S33: -0.2835 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (SEGID A AND RESID 156:172) REMARK 3 ORIGIN FOR THE GROUP (A): 7.3163 -4.4631 19.8039 REMARK 3 T TENSOR REMARK 3 T11: 0.2158 T22: 0.4348 REMARK 3 T33: 0.0919 T12: 0.0040 REMARK 3 T13: 0.0144 T23: -0.0287 REMARK 3 L TENSOR REMARK 3 L11: 3.1734 L22: 3.4008 REMARK 3 L33: -2.2019 L12: 0.0679 REMARK 3 L13: 2.0560 L23: 0.0386 REMARK 3 S TENSOR REMARK 3 S11: -0.0455 S12: 1.2687 S13: 0.0915 REMARK 3 S21: -0.7436 S22: 0.0097 S23: 0.0435 REMARK 3 S31: -0.0129 S32: 0.4197 S33: 0.0189 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (SEGID A AND (RESID 173:220 OR RESID 228:256)) REMARK 3 ORIGIN FOR THE GROUP (A): 9.0144 1.1101 36.9812 REMARK 3 T TENSOR REMARK 3 T11: 0.1281 T22: 0.1286 REMARK 3 T33: 0.1691 T12: -0.0091 REMARK 3 T13: -0.0101 T23: 0.0144 REMARK 3 L TENSOR REMARK 3 L11: 1.7705 L22: 0.2430 REMARK 3 L33: 0.7869 L12: 0.2919 REMARK 3 L13: 0.2915 L23: 0.5613 REMARK 3 S TENSOR REMARK 3 S11: -0.1185 S12: 0.0769 S13: 0.0565 REMARK 3 S21: -0.0097 S22: -0.0097 S23: 0.0709 REMARK 3 S31: -0.0602 S32: 0.0366 S33: 0.1099 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (SEGID A AND RESID 221:227) REMARK 3 ORIGIN FOR THE GROUP (A): -1.2096 -8.2294 14.8500 REMARK 3 T TENSOR REMARK 3 T11: 0.3825 T22: 0.6217 REMARK 3 T33: 0.3391 T12: 0.0169 REMARK 3 T13: -0.0524 T23: -0.1736 REMARK 3 L TENSOR REMARK 3 L11: 3.2626 L22: -0.4510 REMARK 3 L33: 1.8244 L12: -0.2502 REMARK 3 L13: 1.7702 L23: -0.0918 REMARK 3 S TENSOR REMARK 3 S11: 0.1666 S12: 0.4293 S13: -0.3466 REMARK 3 S21: -0.0713 S22: -0.1322 S23: 0.0615 REMARK 3 S31: -0.1833 S32: 0.1232 S33: -0.0193 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3MWQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-MAY-10. REMARK 100 THE DEPOSITION ID IS D_1000059089. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUL-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.21 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27506 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 73.379 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.6 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : 0.05500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.9490 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 57.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.28200 REMARK 200 R SYM FOR SHELL (I) : 0.28200 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE, PHASER REMARK 200 STARTING MODEL: 1SRN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 8000, 0.2M AMMONIUM SULFATE, REMARK 280 PH 5.9, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 286K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 50.81600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 16.45750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 50.81600 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 16.45750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 60 -138.46 -108.55 REMARK 500 GLN A 60 -138.46 -93.75 REMARK 500 ASN A 71 38.14 -95.34 REMARK 500 HIS A 180 62.93 -101.14 REMARK 500 GLN A 192 -129.44 -113.54 REMARK 500 GLN A 192 -129.44 -99.32 REMARK 500 ASN A 203 30.03 -96.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 257 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 258 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 259 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 260 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 261 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 262 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 263 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1R3M RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF UNSWAPPED DIMER OF BOVINE SEMINAL RIBONUCLEASE REMARK 900 RELATED ID: 1BSR RELATED DB: PDB REMARK 900 SWAPPED FORM OF BS-RNASE REMARK 900 RELATED ID: 1A2W RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A 3D DOMAIN-SWAPPED DIMER OF RNASE A REMARK 900 RELATED ID: 7RSA RELATED DB: PDB REMARK 900 STRUCTURE OF PHOSPHATE-FREE RIBONUCLEASE A REMARK 900 RELATED ID: 1SRN RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A FULLY ACTIVE SEMISYNTHETIC RIBONUCLEASE REMARK 900 RELATED ID: 3MWR RELATED DB: PDB REMARK 900 RELATED ID: 3MX8 RELATED DB: PDB DBREF 3MWQ A 1 124 UNP P61823 RNAS1_BOVIN 27 150 DBREF 3MWQ A 125 132 PDB 3MWQ 3MWQ 125 132 DBREF 3MWQ A 133 256 UNP P61823 RNAS1_BOVIN 27 150 SEQRES 1 A 256 LYS GLU THR ALA ALA ALA LYS PHE GLU ARG GLN HIS MET SEQRES 2 A 256 ASP SER SER THR SER ALA ALA SER SER SER ASN TYR CYS SEQRES 3 A 256 ASN GLN MET MET LYS SER ARG ASN LEU THR LYS ASP ARG SEQRES 4 A 256 CYS LYS PRO VAL ASN THR PHE VAL HIS GLU SER LEU ALA SEQRES 5 A 256 ASP VAL GLN ALA VAL CYS SER GLN LYS ASN VAL ALA CYS SEQRES 6 A 256 LYS ASN GLY GLN THR ASN CYS TYR GLN SER TYR SER THR SEQRES 7 A 256 MET SER ILE THR ASP CYS ARG GLU THR GLY SER SER LYS SEQRES 8 A 256 TYR PRO ASN CYS ALA TYR LYS THR THR GLN ALA ASN LYS SEQRES 9 A 256 HIS ILE ILE VAL ALA CYS GLU GLY ASN PRO TYR VAL PRO SEQRES 10 A 256 VAL HIS PHE ASP ALA SER VAL SER GLY ARG SER GLY ARG SEQRES 11 A 256 SER GLY LYS GLU THR ALA ALA ALA LYS PHE GLU ARG GLN SEQRES 12 A 256 HIS MET ASP SER SER THR SER ALA ALA SER SER SER ASN SEQRES 13 A 256 TYR CYS ASN GLN MET MET LYS SER ARG ASN LEU THR LYS SEQRES 14 A 256 ASP ARG CYS LYS PRO VAL ASN THR PHE VAL HIS GLU SER SEQRES 15 A 256 LEU ALA ASP VAL GLN ALA VAL CYS SER GLN LYS ASN VAL SEQRES 16 A 256 ALA CYS LYS ASN GLY GLN THR ASN CYS TYR GLN SER TYR SEQRES 17 A 256 SER THR MET SER ILE THR ASP CYS ARG GLU THR GLY SER SEQRES 18 A 256 SER LYS TYR PRO ASN CYS ALA TYR LYS THR THR GLN ALA SEQRES 19 A 256 ASN LYS HIS ILE ILE VAL ALA CYS GLU GLY ASN PRO TYR SEQRES 20 A 256 VAL PRO VAL HIS PHE ASP ALA SER VAL HET SO4 A 257 5 HET SO4 A 258 5 HET SO4 A 259 5 HET SO4 A 260 5 HET SO4 A 261 5 HET GOL A 262 6 HET GOL A 263 6 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 SO4 5(O4 S 2-) FORMUL 7 GOL 2(C3 H8 O3) FORMUL 9 HOH *274(H2 O) HELIX 1 1 THR A 3 MET A 13 1 11 HELIX 2 2 ASN A 24 ARG A 33 1 10 HELIX 3 3 SER A 50 VAL A 57 1 8 HELIX 4 4 CYS A 58 GLN A 60 5 3 HELIX 5 5 THR A 135 MET A 145 1 11 HELIX 6 6 ASN A 156 ARG A 165 1 10 HELIX 7 7 SER A 182 VAL A 189 1 8 HELIX 8 8 CYS A 190 GLN A 192 5 3 SHEET 1 A 5 VAL A 43 VAL A 47 0 SHEET 2 A 5 MET A 79 GLU A 86 -1 O CYS A 84 N ASN A 44 SHEET 3 A 5 TYR A 97 GLU A 111 -1 O LYS A 98 N ARG A 85 SHEET 4 A 5 CYS A 72 GLN A 74 -1 N TYR A 73 O VAL A 108 SHEET 5 A 5 LYS A 61 VAL A 63 -1 N LYS A 61 O GLN A 74 SHEET 1 B 4 VAL A 43 VAL A 47 0 SHEET 2 B 4 MET A 79 GLU A 86 -1 O CYS A 84 N ASN A 44 SHEET 3 B 4 TYR A 97 GLU A 111 -1 O LYS A 98 N ARG A 85 SHEET 4 B 4 VAL A 116 VAL A 124 -1 O VAL A 118 N ALA A 109 SHEET 1 C 5 VAL A 175 VAL A 179 0 SHEET 2 C 5 MET A 211 GLU A 218 -1 O CYS A 216 N ASN A 176 SHEET 3 C 5 TYR A 229 GLU A 243 -1 O THR A 232 N ASP A 215 SHEET 4 C 5 CYS A 204 GLN A 206 -1 N TYR A 205 O VAL A 240 SHEET 5 C 5 LYS A 193 VAL A 195 -1 N LYS A 193 O GLN A 206 SHEET 1 D 4 VAL A 175 VAL A 179 0 SHEET 2 D 4 MET A 211 GLU A 218 -1 O CYS A 216 N ASN A 176 SHEET 3 D 4 TYR A 229 GLU A 243 -1 O THR A 232 N ASP A 215 SHEET 4 D 4 VAL A 248 VAL A 256 -1 O VAL A 250 N ALA A 241 SSBOND 1 CYS A 26 CYS A 84 1555 1555 2.04 SSBOND 2 CYS A 40 CYS A 95 1555 1555 2.03 SSBOND 3 CYS A 58 CYS A 110 1555 1555 2.02 SSBOND 4 CYS A 65 CYS A 72 1555 1555 2.03 SSBOND 5 CYS A 158 CYS A 216 1555 1555 2.04 SSBOND 6 CYS A 172 CYS A 227 1555 1555 2.03 SSBOND 7 CYS A 190 CYS A 242 1555 1555 2.03 SSBOND 8 CYS A 197 CYS A 204 1555 1555 2.03 CISPEP 1 TYR A 92 PRO A 93 0 3.43 CISPEP 2 ASN A 113 PRO A 114 0 2.03 CISPEP 3 TYR A 224 PRO A 225 0 5.23 CISPEP 4 ASN A 245 PRO A 246 0 4.40 SITE 1 AC1 4 LYS A 133 THR A 135 ALA A 136 HOH A 280 SITE 1 AC2 6 GLN A 143 HIS A 144 LYS A 173 HIS A 251 SITE 2 AC2 6 PHE A 252 HOH A 290 SITE 1 AC3 5 GLN A 11 HIS A 12 HIS A 119 PHE A 120 SITE 2 AC3 5 HOH A 319 SITE 1 AC4 6 THR A 3 ALA A 4 ARG A 130 ASN A 194 SITE 2 AC4 6 TYR A 205 HOH A 321 SITE 1 AC5 6 LYS A 198 ASP A 253 ALA A 254 SER A 255 SITE 2 AC5 6 HOH A 267 HOH A 377 SITE 1 AC6 7 HIS A 12 LYS A 41 VAL A 43 ASN A 44 SITE 2 AC6 7 THR A 45 GOL A 263 HOH A 495 SITE 1 AC7 8 LYS A 1 LYS A 66 ALA A 122 SER A 123 SITE 2 AC7 8 GOL A 262 HOH A 450 HOH A 469 HOH A 493 CRYST1 101.632 32.915 73.391 90.00 91.03 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009839 0.000000 0.000177 0.00000 SCALE2 0.000000 0.030381 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013628 0.00000