data_3MZZ # _entry.id 3MZZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.357 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3MZZ pdb_00003mzz 10.2210/pdb3mzz/pdb RCSB RCSB059206 ? ? WWPDB D_1000059206 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3eme re-refinement unspecified PDB 3iwh re-refinement unspecified TargetDB IDP00640 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3MZZ _pdbx_database_status.recvd_initial_deposition_date 2010-05-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kim, Y.' 1 ? 'Chruszcz, M.' 2 ? 'Minor, W.' 3 0000-0001-7075-7090 'Edwards, A.' 4 ? 'Anderson, W.F.' 5 ? 'Joachimiak, A.' 6 ? 'Center for Structural Genomics of Infectious Diseases (CSGID)' 7 ? # _citation.id primary _citation.title 'Crystal Structure of Rhodanese-like Domain Protein from Staphylococcus aureus' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kim, Y.' 1 ? primary 'Chruszcz, M.' 2 ? primary 'Minor, W.' 3 0000-0001-7075-7090 primary 'Edwards, A.' 4 ? primary 'Anderson, W.F.' 5 ? primary 'Joachimiak, A.' 6 ? # _cell.entry_id 3MZZ _cell.length_a 41.412 _cell.length_b 51.995 _cell.length_c 58.971 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3MZZ _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Rhodanese-like domain protein' 11542.464 1 ? ? ? ? 2 water nat water 18.015 93 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)KSITTDELKNKLLESKPVQIVDVRTDEETA(MSE)GYIPNAKLIP(MSE)DTIPDNLNSFNKNEIYYIVCAGGVR SAKVVEYLEANGIDAVNVEGG(MSE)HAWGDEGLEIKSI ; _entity_poly.pdbx_seq_one_letter_code_can ;MKSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDNLNSFNKNEIYYIVCAGGVRSAKVVEYLEANG IDAVNVEGGMHAWGDEGLEIKSI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier IDP00640 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 LYS n 1 3 SER n 1 4 ILE n 1 5 THR n 1 6 THR n 1 7 ASP n 1 8 GLU n 1 9 LEU n 1 10 LYS n 1 11 ASN n 1 12 LYS n 1 13 LEU n 1 14 LEU n 1 15 GLU n 1 16 SER n 1 17 LYS n 1 18 PRO n 1 19 VAL n 1 20 GLN n 1 21 ILE n 1 22 VAL n 1 23 ASP n 1 24 VAL n 1 25 ARG n 1 26 THR n 1 27 ASP n 1 28 GLU n 1 29 GLU n 1 30 THR n 1 31 ALA n 1 32 MSE n 1 33 GLY n 1 34 TYR n 1 35 ILE n 1 36 PRO n 1 37 ASN n 1 38 ALA n 1 39 LYS n 1 40 LEU n 1 41 ILE n 1 42 PRO n 1 43 MSE n 1 44 ASP n 1 45 THR n 1 46 ILE n 1 47 PRO n 1 48 ASP n 1 49 ASN n 1 50 LEU n 1 51 ASN n 1 52 SER n 1 53 PHE n 1 54 ASN n 1 55 LYS n 1 56 ASN n 1 57 GLU n 1 58 ILE n 1 59 TYR n 1 60 TYR n 1 61 ILE n 1 62 VAL n 1 63 CYS n 1 64 ALA n 1 65 GLY n 1 66 GLY n 1 67 VAL n 1 68 ARG n 1 69 SER n 1 70 ALA n 1 71 LYS n 1 72 VAL n 1 73 VAL n 1 74 GLU n 1 75 TYR n 1 76 LEU n 1 77 GLU n 1 78 ALA n 1 79 ASN n 1 80 GLY n 1 81 ILE n 1 82 ASP n 1 83 ALA n 1 84 VAL n 1 85 ASN n 1 86 VAL n 1 87 GLU n 1 88 GLY n 1 89 GLY n 1 90 MSE n 1 91 HIS n 1 92 ALA n 1 93 TRP n 1 94 GLY n 1 95 ASP n 1 96 GLU n 1 97 GLY n 1 98 LEU n 1 99 GLU n 1 100 ILE n 1 101 LYS n 1 102 SER n 1 103 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene SACOL1807 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain COL _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus aureus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 93062 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5HF17_STAAC _struct_ref.pdbx_db_accession Q5HF17 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAKLIPMDTIPDNLNSFNKNEIYYIVCAGGVRSAKVVEYLEANG IDAVNVEGGMHAWGDEGLEIKSI ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3MZZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 103 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q5HF17 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 103 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 103 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3MZZ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.75 _exptl_crystal.density_percent_sol 55.28 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-02-16 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9793 1.0 2 0.9795 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9793, 0.9795' # _reflns.entry_id 3MZZ _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 39 _reflns.d_resolution_high 2.0 _reflns.number_obs 8559 _reflns.number_all ? _reflns.percent_possible_obs 98.9 _reflns.pdbx_Rmerge_I_obs 0.075 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.2 _reflns.B_iso_Wilson_estimate 23.8 _reflns.pdbx_redundancy 5.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.0 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 97.1 _reflns_shell.Rmerge_I_obs 0.27 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.8 _reflns_shell.pdbx_redundancy 3.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1633 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3MZZ _refine.ls_number_reflns_obs 8559 _refine.ls_number_reflns_all 8559 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 15.62 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 99.76 _refine.ls_R_factor_obs 0.158 _refine.ls_R_factor_all 0.158 _refine.ls_R_factor_R_work 0.156 _refine.ls_R_factor_R_free 0.199 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 428 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.962 _refine.correlation_coeff_Fo_to_Fc_free 0.946 _refine.B_iso_mean 27.847 _refine.aniso_B[1][1] 0.30 _refine.aniso_B[2][2] 1.12 _refine.aniso_B[3][3] -1.42 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.132 _refine.overall_SU_ML 0.092 _refine.overall_SU_B 7.413 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 790 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 93 _refine_hist.number_atoms_total 883 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 15.62 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.019 0.022 ? 838 'X-RAY DIFFRACTION' ? r_bond_other_d 0.014 0.020 ? 549 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.505 1.974 ? 1140 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.948 3.000 ? 1367 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.419 5.000 ? 110 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.707 27.027 ? 37 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.482 15.000 ? 154 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.647 15.000 ? 2 'X-RAY DIFFRACTION' ? r_chiral_restr 0.097 0.200 ? 130 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.021 ? 951 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 142 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.037 1.500 ? 534 'X-RAY DIFFRACTION' ? r_mcbond_other 0.254 1.500 ? 217 'X-RAY DIFFRACTION' ? r_mcangle_it 1.945 2.000 ? 869 'X-RAY DIFFRACTION' ? r_scbond_it 3.198 3.000 ? 304 'X-RAY DIFFRACTION' ? r_scangle_it 5.090 4.500 ? 271 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.000 _refine_ls_shell.d_res_low 2.051 _refine_ls_shell.number_reflns_R_work 589 _refine_ls_shell.R_factor_R_work 0.207 _refine_ls_shell.percent_reflns_obs 99.84 _refine_ls_shell.R_factor_R_free 0.257 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 37 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 626 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3MZZ _struct.title 'Crystal Structure of Rhodanese-like Domain Protein from Staphylococcus aureus' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3MZZ _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.text ;Rhodanese, alpha-beta-alpha sandwich, Structural Genomics, Center for Structural Genomics of Infectious Diseases, CSGID, UNKNOWN FUNCTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 5 ? LEU A 13 ? THR A 5 LEU A 13 1 ? 9 HELX_P HELX_P2 2 THR A 26 ? ALA A 31 ? THR A 26 ALA A 31 1 ? 6 HELX_P HELX_P3 3 PRO A 42 ? PHE A 53 ? PRO A 42 PHE A 53 5 ? 12 HELX_P HELX_P4 4 GLY A 66 ? ASN A 79 ? GLY A 66 ASN A 79 1 ? 14 HELX_P HELX_P5 5 GLY A 88 ? GLY A 94 ? GLY A 88 GLY A 94 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 1 C ? ? ? 1_555 A LYS 2 N ? ? A MSE 1 A LYS 2 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? A ALA 31 C ? ? ? 1_555 A MSE 32 N ? ? A ALA 31 A MSE 32 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale3 covale both ? A MSE 32 C ? ? ? 1_555 A GLY 33 N ? ? A MSE 32 A GLY 33 1_555 ? ? ? ? ? ? ? 1.316 ? ? covale4 covale both ? A PRO 42 C ? ? ? 1_555 A MSE 43 N ? ? A PRO 42 A MSE 43 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale5 covale both ? A MSE 43 C ? ? ? 1_555 A ASP 44 N ? ? A MSE 43 A ASP 44 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale6 covale both ? A GLY 89 C ? ? ? 1_555 A MSE 90 N ? ? A GLY 89 A MSE 90 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale7 covale both ? A MSE 90 C ? ? ? 1_555 A HIS 91 N ? ? A MSE 90 A HIS 91 1_555 ? ? ? ? ? ? ? 1.332 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 3 ? ILE A 4 ? SER A 3 ILE A 4 A 2 ASP A 82 ? VAL A 86 ? ASP A 82 VAL A 86 A 3 ILE A 58 ? VAL A 62 ? ILE A 58 VAL A 62 A 4 GLN A 20 ? ASP A 23 ? GLN A 20 ASP A 23 A 5 LYS A 39 ? LEU A 40 ? LYS A 39 LEU A 40 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 4 ? N ILE A 4 O ASN A 85 ? O ASN A 85 A 2 3 O VAL A 84 ? O VAL A 84 N ILE A 61 ? N ILE A 61 A 3 4 O TYR A 60 ? O TYR A 60 N GLN A 20 ? N GLN A 20 A 4 5 N ILE A 21 ? N ILE A 21 O LYS A 39 ? O LYS A 39 # _database_PDB_matrix.entry_id 3MZZ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3MZZ _atom_sites.fract_transf_matrix[1][1] 0.024148 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019233 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016957 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 1 MSE MSE A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 ASN 11 11 11 ASN ASN A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 PRO 18 18 18 PRO PRO A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 GLN 20 20 20 GLN GLN A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 ASP 23 23 23 ASP ASP A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 THR 30 30 30 THR THR A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 MSE 32 32 32 MSE MSE A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 TYR 34 34 34 TYR TYR A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 PRO 36 36 36 PRO PRO A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 PRO 42 42 42 PRO PRO A . n A 1 43 MSE 43 43 43 MSE MSE A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 ASN 49 49 49 ASN ASN A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 ASN 54 54 54 ASN ASN A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 ASN 56 56 56 ASN ASN A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 CYS 63 63 63 CYS CYS A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 ARG 68 68 68 ARG ARG A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 TYR 75 75 75 TYR TYR A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 ASP 82 82 82 ASP ASP A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 ASN 85 85 85 ASN ASN A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 MSE 90 90 90 MSE MSE A . n A 1 91 HIS 91 91 91 HIS HIS A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 TRP 93 93 93 TRP TRP A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 GLU 96 96 96 GLU GLU A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 GLU 99 99 99 GLU GLU A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 LYS 101 101 101 LYS LYS A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 ILE 103 103 103 ILE ILE A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Center for Structural Genomics of Infectious Diseases' _pdbx_SG_project.initial_of_center CSGID # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 104 1 HOH HOH A . B 2 HOH 2 105 2 HOH HOH A . B 2 HOH 3 106 3 HOH HOH A . B 2 HOH 4 107 4 HOH HOH A . B 2 HOH 5 108 5 HOH HOH A . B 2 HOH 6 109 6 HOH HOH A . B 2 HOH 7 110 7 HOH HOH A . B 2 HOH 8 111 8 HOH HOH A . B 2 HOH 9 112 9 HOH HOH A . B 2 HOH 10 113 10 HOH HOH A . B 2 HOH 11 114 11 HOH HOH A . B 2 HOH 12 115 12 HOH HOH A . B 2 HOH 13 116 13 HOH HOH A . B 2 HOH 14 117 14 HOH HOH A . B 2 HOH 15 118 15 HOH HOH A . B 2 HOH 16 119 16 HOH HOH A . B 2 HOH 17 120 17 HOH HOH A . B 2 HOH 18 121 18 HOH HOH A . B 2 HOH 19 122 19 HOH HOH A . B 2 HOH 20 123 20 HOH HOH A . B 2 HOH 21 124 21 HOH HOH A . B 2 HOH 22 125 22 HOH HOH A . B 2 HOH 23 126 23 HOH HOH A . B 2 HOH 24 127 24 HOH HOH A . B 2 HOH 25 128 25 HOH HOH A . B 2 HOH 26 129 26 HOH HOH A . B 2 HOH 27 130 27 HOH HOH A . B 2 HOH 28 131 28 HOH HOH A . B 2 HOH 29 132 29 HOH HOH A . B 2 HOH 30 133 30 HOH HOH A . B 2 HOH 31 134 31 HOH HOH A . B 2 HOH 32 135 32 HOH HOH A . B 2 HOH 33 136 33 HOH HOH A . B 2 HOH 34 137 34 HOH HOH A . B 2 HOH 35 138 35 HOH HOH A . B 2 HOH 36 139 36 HOH HOH A . B 2 HOH 37 140 37 HOH HOH A . B 2 HOH 38 141 38 HOH HOH A . B 2 HOH 39 142 39 HOH HOH A . B 2 HOH 40 143 40 HOH HOH A . B 2 HOH 41 144 41 HOH HOH A . B 2 HOH 42 145 42 HOH HOH A . B 2 HOH 43 146 43 HOH HOH A . B 2 HOH 44 147 44 HOH HOH A . B 2 HOH 45 148 45 HOH HOH A . B 2 HOH 46 149 46 HOH HOH A . B 2 HOH 47 150 47 HOH HOH A . B 2 HOH 48 151 48 HOH HOH A . B 2 HOH 49 152 49 HOH HOH A . B 2 HOH 50 153 50 HOH HOH A . B 2 HOH 51 154 51 HOH HOH A . B 2 HOH 52 155 52 HOH HOH A . B 2 HOH 53 156 53 HOH HOH A . B 2 HOH 54 157 54 HOH HOH A . B 2 HOH 55 158 55 HOH HOH A . B 2 HOH 56 159 56 HOH HOH A . B 2 HOH 57 160 57 HOH HOH A . B 2 HOH 58 161 58 HOH HOH A . B 2 HOH 59 162 59 HOH HOH A . B 2 HOH 60 163 60 HOH HOH A . B 2 HOH 61 164 61 HOH HOH A . B 2 HOH 62 165 62 HOH HOH A . B 2 HOH 63 166 63 HOH HOH A . B 2 HOH 64 167 64 HOH HOH A . B 2 HOH 65 168 65 HOH HOH A . B 2 HOH 66 169 66 HOH HOH A . B 2 HOH 67 170 67 HOH HOH A . B 2 HOH 68 171 68 HOH HOH A . B 2 HOH 69 172 69 HOH HOH A . B 2 HOH 70 173 70 HOH HOH A . B 2 HOH 71 174 71 HOH HOH A . B 2 HOH 72 175 72 HOH HOH A . B 2 HOH 73 176 73 HOH HOH A . B 2 HOH 74 177 74 HOH HOH A . B 2 HOH 75 178 75 HOH HOH A . B 2 HOH 76 179 76 HOH HOH A . B 2 HOH 77 180 77 HOH HOH A . B 2 HOH 78 181 78 HOH HOH A . B 2 HOH 79 182 79 HOH HOH A . B 2 HOH 80 183 80 HOH HOH A . B 2 HOH 81 184 81 HOH HOH A . B 2 HOH 82 185 82 HOH HOH A . B 2 HOH 83 186 83 HOH HOH A . B 2 HOH 84 187 84 HOH HOH A . B 2 HOH 85 188 85 HOH HOH A . B 2 HOH 86 189 86 HOH HOH A . B 2 HOH 87 190 87 HOH HOH A . B 2 HOH 88 191 88 HOH HOH A . B 2 HOH 89 192 89 HOH HOH A . B 2 HOH 90 193 90 HOH HOH A . B 2 HOH 91 194 91 HOH HOH A . B 2 HOH 92 195 92 HOH HOH A . B 2 HOH 93 196 93 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 1 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 32 A MSE 32 ? MET SELENOMETHIONINE 3 A MSE 43 A MSE 43 ? MET SELENOMETHIONINE 4 A MSE 90 A MSE 90 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-06-30 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-04-04 4 'Structure model' 1 3 2019-07-17 5 'Structure model' 1 4 2022-04-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Structure summary' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 4 'Structure model' struct_conn 3 5 'Structure model' audit_author 4 5 'Structure model' citation_author 5 5 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 4 'Structure model' '_software.version' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 5 'Structure model' '_audit_author.identifier_ORCID' 6 5 'Structure model' '_citation_author.identifier_ORCID' 7 5 'Structure model' '_database_2.pdbx_DOI' 8 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 13.1420 _pdbx_refine_tls.origin_y -2.1030 _pdbx_refine_tls.origin_z 3.0950 _pdbx_refine_tls.T[1][1] 0.0364 _pdbx_refine_tls.T[2][2] 0.0345 _pdbx_refine_tls.T[3][3] 0.0608 _pdbx_refine_tls.T[1][2] -0.0131 _pdbx_refine_tls.T[1][3] 0.0325 _pdbx_refine_tls.T[2][3] -0.0003 _pdbx_refine_tls.L[1][1] 1.0941 _pdbx_refine_tls.L[2][2] 1.0545 _pdbx_refine_tls.L[3][3] 4.2430 _pdbx_refine_tls.L[1][2] -0.1192 _pdbx_refine_tls.L[1][3] 0.8358 _pdbx_refine_tls.L[2][3] 0.5024 _pdbx_refine_tls.S[1][1] 0.0240 _pdbx_refine_tls.S[1][2] 0.0285 _pdbx_refine_tls.S[1][3] 0.0962 _pdbx_refine_tls.S[2][1] -0.0499 _pdbx_refine_tls.S[2][2] 0.0002 _pdbx_refine_tls.S[2][3] -0.0217 _pdbx_refine_tls.S[3][1] -0.1854 _pdbx_refine_tls.S[3][2] 0.1478 _pdbx_refine_tls.S[3][3] -0.0242 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 103 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0072 ? 1 HKL-3000 'data collection' . ? 2 CNS refinement . ? 3 SBC-Collect 'data collection' . ? 4 HKL-3000 'data reduction' . ? 5 HKL-3000 'data scaling' . ? 6 CNS phasing . ? 7 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id CYS _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 63 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id B _pdbx_validate_torsion.phi -128.39 _pdbx_validate_torsion.psi -161.34 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 7 ? CG ? A ASP 7 CG 2 1 Y 1 A ASP 7 ? OD1 ? A ASP 7 OD1 3 1 Y 1 A ASP 7 ? OD2 ? A ASP 7 OD2 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #