HEADER PROTEIN TRANSPORT 24-MAY-10 3N5A TITLE SYNAPTOTAGMIN-7, C2B-DOMAIN, CALCIUM BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: SYNAPTOTAGMIN-7; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C2B DOMAIN RESIDUES 266-403; COMPND 5 SYNONYM: SYNAPTOTAGMIN VII, SYTVII; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: SYT7; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS CALCIUM/PHOSPHOLIPID BINDING PROTEIN, PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR D.R.TOMCHICK,J.RIZO,T.K.CRAIG REVDAT 5 06-SEP-23 3N5A 1 REMARK LINK REVDAT 4 20-OCT-10 3N5A 1 JRNL REVDAT 3 13-OCT-10 3N5A 1 JRNL REVDAT 2 06-OCT-10 3N5A 1 JRNL REVDAT 1 29-SEP-10 3N5A 0 JRNL AUTH M.XUE,T.K.CRAIG,O.H.SHIN,L.LI,C.A.BRAUTIGAM,D.R.TOMCHICK, JRNL AUTH 2 T.C.SUDHOF,C.ROSENMUND,J.RIZO JRNL TITL STRUCTURAL AND MUTATIONAL ANALYSIS OF FUNCTIONAL JRNL TITL 2 DIFFERENTIATION BETWEEN SYNAPTOTAGMINS-1 AND -7. JRNL REF PLOS ONE V. 5 12544 2010 JRNL REFN ESSN 1932-6203 JRNL PMID 20824061 JRNL DOI 10.1371/JOURNAL.PONE.0012544 REMARK 2 REMARK 2 RESOLUTION. 1.44 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6_289 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.44 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 25550 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.181 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 1310 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 23.5130 - 2.9950 0.99 2879 157 0.1770 0.1930 REMARK 3 2 2.9950 - 2.3780 0.99 2769 143 0.1550 0.1980 REMARK 3 3 2.3780 - 2.0780 0.99 2743 155 0.1350 0.1330 REMARK 3 4 2.0780 - 1.8880 0.99 2684 145 0.1240 0.1370 REMARK 3 5 1.8880 - 1.7530 0.99 2694 144 0.1340 0.1500 REMARK 3 6 1.7530 - 1.6490 0.98 2677 129 0.1370 0.1660 REMARK 3 7 1.6490 - 1.5670 0.98 2641 148 0.1490 0.1820 REMARK 3 8 1.5670 - 1.4990 0.98 2615 146 0.1620 0.2110 REMARK 3 9 1.4990 - 1.4410 0.94 2538 143 0.1930 0.2400 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.51 REMARK 3 B_SOL : 56.20 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.010 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.96800 REMARK 3 B22 (A**2) : 0.01300 REMARK 3 B33 (A**2) : -2.98000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.021 1300 REMARK 3 ANGLE : 1.340 1788 REMARK 3 CHIRALITY : 0.083 190 REMARK 3 PLANARITY : 0.008 224 REMARK 3 DIHEDRAL : 14.753 504 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 266:286) REMARK 3 ORIGIN FOR THE GROUP (A): 11.3702 29.1960 -11.2147 REMARK 3 T TENSOR REMARK 3 T11: 0.0781 T22: 0.0770 REMARK 3 T33: 0.0714 T12: -0.0045 REMARK 3 T13: 0.0081 T23: 0.0108 REMARK 3 L TENSOR REMARK 3 L11: 0.4785 L22: -0.0046 REMARK 3 L33: 0.2145 L12: 0.0960 REMARK 3 L13: 0.3608 L23: -0.0243 REMARK 3 S TENSOR REMARK 3 S11: -0.0197 S12: 0.0795 S13: 0.0044 REMARK 3 S21: -0.0101 S22: -0.0238 S23: 0.0052 REMARK 3 S31: -0.1262 S32: 0.0346 S33: -0.0091 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 287:297) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5785 23.6060 7.1135 REMARK 3 T TENSOR REMARK 3 T11: 0.0724 T22: 0.0705 REMARK 3 T33: 0.0861 T12: 0.0023 REMARK 3 T13: 0.0047 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 0.0214 L22: 0.0281 REMARK 3 L33: 0.0700 L12: -0.0498 REMARK 3 L13: -0.0115 L23: 0.0346 REMARK 3 S TENSOR REMARK 3 S11: -0.0202 S12: -0.0405 S13: -0.0003 REMARK 3 S21: 0.0321 S22: 0.0763 S23: 0.0453 REMARK 3 S31: -0.0256 S32: -0.0302 S33: 0.0154 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 298:308) REMARK 3 ORIGIN FOR THE GROUP (A): 16.2510 19.6077 6.7458 REMARK 3 T TENSOR REMARK 3 T11: 0.0941 T22: 0.0833 REMARK 3 T33: 0.0795 T12: 0.0077 REMARK 3 T13: 0.0004 T23: 0.0041 REMARK 3 L TENSOR REMARK 3 L11: 0.0738 L22: 0.0907 REMARK 3 L33: 0.0282 L12: -0.1107 REMARK 3 L13: -0.0486 L23: 0.0467 REMARK 3 S TENSOR REMARK 3 S11: -0.0228 S12: 0.0152 S13: -0.0482 REMARK 3 S21: 0.0283 S22: 0.0478 S23: -0.0322 REMARK 3 S31: 0.1000 S32: 0.1047 S33: 0.0005 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 309:318) REMARK 3 ORIGIN FOR THE GROUP (A): 14.4077 14.6007 -15.0478 REMARK 3 T TENSOR REMARK 3 T11: 0.1169 T22: 0.1365 REMARK 3 T33: 0.1203 T12: -0.0005 REMARK 3 T13: -0.0036 T23: -0.0354 REMARK 3 L TENSOR REMARK 3 L11: 0.1203 L22: 0.0468 REMARK 3 L33: 0.0340 L12: -0.0181 REMARK 3 L13: 0.0050 L23: 0.0236 REMARK 3 S TENSOR REMARK 3 S11: 0.0132 S12: 0.1681 S13: -0.3491 REMARK 3 S21: -0.0906 S22: 0.1551 S23: -0.1251 REMARK 3 S31: 0.1977 S32: 0.3218 S33: 0.0024 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 319:328) REMARK 3 ORIGIN FOR THE GROUP (A): 20.7342 23.0924 3.3086 REMARK 3 T TENSOR REMARK 3 T11: 0.0896 T22: 0.1309 REMARK 3 T33: 0.0911 T12: -0.0116 REMARK 3 T13: -0.0152 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 0.1067 L22: 0.0793 REMARK 3 L33: 0.0707 L12: -0.0875 REMARK 3 L13: 0.0053 L23: 0.0860 REMARK 3 S TENSOR REMARK 3 S11: -0.0027 S12: 0.1431 S13: -0.0059 REMARK 3 S21: 0.1764 S22: 0.0211 S23: -0.1061 REMARK 3 S31: 0.2877 S32: 0.0347 S33: -0.0057 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 329:339) REMARK 3 ORIGIN FOR THE GROUP (A): 17.0740 29.1714 -1.3286 REMARK 3 T TENSOR REMARK 3 T11: 0.0630 T22: 0.0729 REMARK 3 T33: 0.0687 T12: -0.0117 REMARK 3 T13: -0.0036 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 0.2158 L22: 0.1171 REMARK 3 L33: 0.0391 L12: -0.1564 REMARK 3 L13: 0.0886 L23: -0.0322 REMARK 3 S TENSOR REMARK 3 S11: -0.0134 S12: 0.0770 S13: 0.0009 REMARK 3 S21: 0.0229 S22: 0.0071 S23: -0.0052 REMARK 3 S31: 0.0007 S32: -0.0005 S33: -0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 340:345) REMARK 3 ORIGIN FOR THE GROUP (A): 13.4196 23.7213 -23.7959 REMARK 3 T TENSOR REMARK 3 T11: 0.1374 T22: 0.1693 REMARK 3 T33: 0.0987 T12: -0.0031 REMARK 3 T13: -0.0189 T23: -0.0184 REMARK 3 L TENSOR REMARK 3 L11: 0.0058 L22: -0.0003 REMARK 3 L33: 0.0111 L12: -0.0085 REMARK 3 L13: 0.0021 L23: 0.0043 REMARK 3 S TENSOR REMARK 3 S11: -0.0321 S12: -0.0796 S13: 0.1088 REMARK 3 S21: -0.1281 S22: 0.1713 S23: -0.0505 REMARK 3 S31: 0.1229 S32: 0.4037 S33: 0.0002 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 346:350) REMARK 3 ORIGIN FOR THE GROUP (A): 6.7819 19.6766 -20.4436 REMARK 3 T TENSOR REMARK 3 T11: 0.1260 T22: 0.1609 REMARK 3 T33: 0.0866 T12: 0.0157 REMARK 3 T13: -0.0424 T23: 0.0070 REMARK 3 L TENSOR REMARK 3 L11: 0.0068 L22: 0.0117 REMARK 3 L33: 0.0474 L12: 0.0164 REMARK 3 L13: 0.0023 L23: -0.0040 REMARK 3 S TENSOR REMARK 3 S11: 0.0896 S12: 0.1347 S13: 0.0944 REMARK 3 S21: -0.2382 S22: -0.0602 S23: 0.2938 REMARK 3 S31: -0.1532 S32: -0.3393 S33: 0.0039 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 351:359) REMARK 3 ORIGIN FOR THE GROUP (A): 14.7539 17.8384 0.3216 REMARK 3 T TENSOR REMARK 3 T11: 0.0941 T22: 0.0768 REMARK 3 T33: 0.0963 T12: 0.0056 REMARK 3 T13: -0.0061 T23: 0.0049 REMARK 3 L TENSOR REMARK 3 L11: -0.0213 L22: 0.0356 REMARK 3 L33: 0.0389 L12: 0.0306 REMARK 3 L13: 0.0304 L23: -0.0301 REMARK 3 S TENSOR REMARK 3 S11: -0.0173 S12: 0.0976 S13: -0.0890 REMARK 3 S21: -0.0214 S22: -0.0059 S23: -0.0739 REMARK 3 S31: 0.0530 S32: 0.1132 S33: -0.0029 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 360:369) REMARK 3 ORIGIN FOR THE GROUP (A): 16.4953 11.8638 5.4772 REMARK 3 T TENSOR REMARK 3 T11: 0.0911 T22: 0.0795 REMARK 3 T33: 0.1056 T12: 0.0138 REMARK 3 T13: -0.0128 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 0.0711 L22: 0.0502 REMARK 3 L33: 0.0570 L12: 0.0009 REMARK 3 L13: -0.0646 L23: -0.0550 REMARK 3 S TENSOR REMARK 3 S11: 0.0800 S12: 0.1075 S13: -0.0749 REMARK 3 S21: -0.0625 S22: -0.0196 S23: -0.0116 REMARK 3 S31: 0.1788 S32: 0.0449 S33: -0.0009 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN A AND RESID 370:381) REMARK 3 ORIGIN FOR THE GROUP (A): 1.8328 21.5448 -11.0104 REMARK 3 T TENSOR REMARK 3 T11: 0.0718 T22: 0.1098 REMARK 3 T33: 0.1231 T12: -0.0111 REMARK 3 T13: -0.0174 T23: 0.0087 REMARK 3 L TENSOR REMARK 3 L11: 0.0839 L22: 0.0941 REMARK 3 L33: 0.0157 L12: -0.0250 REMARK 3 L13: -0.0223 L23: 0.0446 REMARK 3 S TENSOR REMARK 3 S11: 0.1463 S12: -0.1454 S13: -0.1540 REMARK 3 S21: -0.0686 S22: 0.0121 S23: 0.0671 REMARK 3 S31: 0.1920 S32: -0.1375 S33: 0.0093 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN A AND RESID 382:391) REMARK 3 ORIGIN FOR THE GROUP (A): 3.2141 31.2907 -15.3215 REMARK 3 T TENSOR REMARK 3 T11: 0.0593 T22: 0.0403 REMARK 3 T33: 0.0562 T12: 0.0293 REMARK 3 T13: -0.0034 T23: -0.0174 REMARK 3 L TENSOR REMARK 3 L11: 0.9302 L22: 0.1189 REMARK 3 L33: 0.3403 L12: 0.0430 REMARK 3 L13: -0.3370 L23: -0.1557 REMARK 3 S TENSOR REMARK 3 S11: 0.0160 S12: -0.0664 S13: -0.1820 REMARK 3 S21: -0.0927 S22: -0.1509 S23: 0.1370 REMARK 3 S31: -0.2252 S32: -0.0751 S33: -0.0120 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN A AND RESID 392:403) REMARK 3 ORIGIN FOR THE GROUP (A): 5.7555 30.4758 -6.3074 REMARK 3 T TENSOR REMARK 3 T11: 0.0235 T22: 0.0310 REMARK 3 T33: 0.0443 T12: -0.0059 REMARK 3 T13: 0.0002 T23: 0.0112 REMARK 3 L TENSOR REMARK 3 L11: 0.2104 L22: 1.2943 REMARK 3 L33: 0.3523 L12: 0.1705 REMARK 3 L13: 0.0195 L23: 0.0847 REMARK 3 S TENSOR REMARK 3 S11: -0.0758 S12: 0.0405 S13: -0.0058 REMARK 3 S21: -0.1108 S22: 0.1581 S23: 0.1849 REMARK 3 S31: 0.0084 S32: -0.2203 S33: -0.1612 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS WERE ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 3N5A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000059397. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.0148 REMARK 200 MONOCHROMATOR : SAGITALLY FOCUSED SI(111) REMARK 200 OPTICS : MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-3 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25581 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.440 REMARK 200 RESOLUTION RANGE LOW (A) : 43.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.03900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.44 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.39700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1TJM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 3350, 0.2 M LI2SO4, 0.1 M REMARK 280 HEPES PH 6.5, 0.05 M NACL, 0.02 M CACL2, 1 MM TCEP, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 17.79900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.69150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.44600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 43.69150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 17.79900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 22.44600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD1 HIS A 383 HE2 HIS A 399 1.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 313 -130.66 49.15 REMARK 500 PHE A 333 -62.87 -103.33 REMARK 500 PHE A 333 -62.56 -103.33 REMARK 500 SER A 373 -178.10 -173.50 REMARK 500 SER A 376 -153.26 -130.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 102 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 34 O REMARK 620 2 MET A 296 O 87.6 REMARK 620 3 MET A 296 O 84.3 4.1 REMARK 620 4 ASP A 297 OD1 88.6 79.5 82.0 REMARK 620 5 ASP A 357 OD2 171.1 88.6 92.1 82.8 REMARK 620 6 ASP A 359 OD2 80.2 156.3 152.4 120.0 106.1 REMARK 620 7 ASP A 359 OD1 100.7 150.7 154.0 72.7 79.1 52.6 REMARK 620 8 ASP A 365 OD2 96.1 82.5 80.3 161.2 91.3 78.7 123.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 104 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 64 O REMARK 620 2 ASP A 359 O 151.4 REMARK 620 3 SER A 362 O 99.6 80.2 REMARK 620 4 ASN A 364 OD1 73.8 77.8 98.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 103 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 99 O REMARK 620 2 ASP A 359 OD2 96.4 REMARK 620 3 SER A 362 OG 84.3 88.8 REMARK 620 4 ARG A 363 O 168.9 93.1 90.2 REMARK 620 5 ARG A 363 O 161.9 101.7 97.7 11.4 REMARK 620 6 ASP A 365 OD1 91.1 92.1 175.4 94.3 86.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 101 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 120 O REMARK 620 2 ASP A 297 OD2 91.9 REMARK 620 3 ASP A 297 OD1 87.4 50.6 REMARK 620 4 ASP A 303 OD2 81.7 76.4 125.5 REMARK 620 5 ASP A 357 OD1 174.8 90.6 97.7 94.4 REMARK 620 6 LYS A 358 O 91.9 158.2 151.0 83.0 84.1 REMARK 620 7 ASP A 359 OD1 86.0 121.7 71.1 158.6 96.6 79.9 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 103 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 104 DBREF 3N5A A 266 403 UNP Q9R0N7 SYT7_MOUSE 266 403 SEQRES 1 A 138 SER ARG GLY GLU LEU LEU LEU SER LEU CYS TYR ASN PRO SEQRES 2 A 138 SER ALA ASN SER ILE ILE VAL ASN ILE ILE LYS ALA ARG SEQRES 3 A 138 ASN LEU LYS ALA MET ASP ILE GLY GLY THR SER ASP PRO SEQRES 4 A 138 TYR VAL LYS VAL TRP LEU MET TYR LYS ASP LYS ARG VAL SEQRES 5 A 138 GLU LYS LYS LYS THR VAL THR LYS LYS ARG ASN LEU ASN SEQRES 6 A 138 PRO ILE PHE ASN GLU SER PHE ALA PHE ASP ILE PRO THR SEQRES 7 A 138 GLU LYS LEU ARG GLU THR THR ILE ILE ILE THR VAL MET SEQRES 8 A 138 ASP LYS ASP LYS LEU SER ARG ASN ASP VAL ILE GLY LYS SEQRES 9 A 138 ILE TYR LEU SER TRP LYS SER GLY PRO GLY GLU VAL LYS SEQRES 10 A 138 HIS TRP LYS ASP MET ILE ALA ARG PRO ARG GLN PRO VAL SEQRES 11 A 138 ALA GLN TRP HIS GLN LEU LYS ALA HET CA A 101 1 HET CA A 102 1 HET CA A 103 1 HET CA A 104 1 HETNAM CA CALCIUM ION FORMUL 2 CA 4(CA 2+) FORMUL 6 HOH *183(H2 O) HELIX 1 1 PRO A 342 ARG A 347 5 6 HELIX 2 2 GLY A 377 ARG A 390 1 14 SHEET 1 A 4 ILE A 332 ASP A 340 0 SHEET 2 A 4 SER A 282 ARG A 291 -1 N ILE A 287 O GLU A 335 SHEET 3 A 4 GLU A 269 ASN A 277 -1 N LEU A 271 O LYS A 289 SHEET 4 A 4 VAL A 395 GLN A 400 -1 O VAL A 395 N LEU A 274 SHEET 1 B 4 LYS A 315 LYS A 321 0 SHEET 2 B 4 PRO A 304 TYR A 312 -1 N VAL A 308 O LYS A 320 SHEET 3 B 4 THR A 349 ASP A 357 -1 O MET A 356 N TYR A 305 SHEET 4 B 4 ASP A 365 LEU A 372 -1 O GLY A 368 N VAL A 355 LINK O HOH A 34 CA CA A 102 1555 1555 2.31 LINK O HOH A 64 CA CA A 104 1555 1555 2.87 LINK O HOH A 99 CA CA A 103 1555 1555 2.56 LINK CA CA A 101 O HOH A 120 1555 1555 2.37 LINK CA CA A 101 OD2 ASP A 297 1555 1555 2.43 LINK CA CA A 101 OD1 ASP A 297 1555 1555 2.67 LINK CA CA A 101 OD2 ASP A 303 1555 1555 2.37 LINK CA CA A 101 OD1 ASP A 357 1555 1555 2.40 LINK CA CA A 101 O LYS A 358 1555 1555 2.35 LINK CA CA A 101 OD1 ASP A 359 1555 1555 2.32 LINK CA CA A 102 O AMET A 296 1555 1555 2.32 LINK CA CA A 102 O BMET A 296 1555 1555 2.56 LINK CA CA A 102 OD1 ASP A 297 1555 1555 2.42 LINK CA CA A 102 OD2 ASP A 357 1555 1555 2.30 LINK CA CA A 102 OD2 ASP A 359 1555 1555 2.49 LINK CA CA A 102 OD1 ASP A 359 1555 1555 2.50 LINK CA CA A 102 OD2 ASP A 365 1555 1555 2.32 LINK CA CA A 103 OD2 ASP A 359 1555 1555 2.38 LINK CA CA A 103 OG SER A 362 1555 1555 2.44 LINK CA CA A 103 O AARG A 363 1555 1555 2.32 LINK CA CA A 103 O BARG A 363 1555 1555 2.50 LINK CA CA A 103 OD1 ASP A 365 1555 1555 2.45 LINK CA CA A 104 O ASP A 359 1555 1555 2.61 LINK CA CA A 104 O SER A 362 1555 1555 2.68 LINK CA CA A 104 OD1 ASN A 364 1555 1555 2.63 SITE 1 AC1 6 HOH A 120 ASP A 297 ASP A 303 ASP A 357 SITE 2 AC1 6 LYS A 358 ASP A 359 SITE 1 AC2 6 HOH A 34 MET A 296 ASP A 297 ASP A 357 SITE 2 AC2 6 ASP A 359 ASP A 365 SITE 1 AC3 6 HOH A 99 HOH A 175 ASP A 359 SER A 362 SITE 2 AC3 6 ARG A 363 ASP A 365 SITE 1 AC4 5 HOH A 64 ASP A 359 SER A 362 ASN A 364 SITE 2 AC4 5 TYR A 371 CRYST1 35.598 44.892 87.383 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028091 0.000000 0.000000 0.00000 SCALE2 0.000000 0.022276 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011444 0.00000