HEADER TRANSCRIPTION REGULATOR 24-MAY-10 3N5B TITLE THE COMPLEX OF PII AND PIPX FROM ANABAENA COMPND MOL_ID: 1; COMPND 2 MOLECULE: NITROGEN REGULATORY PROTEIN P-II; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PII PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: ASR0485 PROTEIN; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: NTCA-INTERACTING PROTEIN; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NOSTOC; SOURCE 3 ORGANISM_TAXID: 103690; SOURCE 4 STRAIN: PCC 7120; SOURCE 5 GENE: ALL2319, GLNB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET29; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: NOSTOC; SOURCE 13 ORGANISM_TAXID: 103690; SOURCE 14 STRAIN: PCC 7120; SOURCE 15 GENE: ASR0485; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS PII, PIPX, TRANSCRIPTION REGULATOR, SIGNAL TRANSDUCER EXPDTA X-RAY DIFFRACTION AUTHOR Y.-L.JIANG,M.-X.ZHAO,B.-Y.XU,Y.-X.CHEN,C.-C.ZHANG,C.-Z.ZHOU REVDAT 3 01-NOV-23 3N5B 1 REMARK SEQADV REVDAT 2 27-OCT-10 3N5B 1 JRNL REMARK REVDAT 1 01-SEP-10 3N5B 0 JRNL AUTH M.-X.ZHAO,Y.-L.JIANG,B.-Y.XU,Y.-X.CHEN,C.-C.ZHANG,C.-Z.ZHOU JRNL TITL CRYSTAL STRUCTURE OF THE CYANOBACTERIAL SIGNAL TRANSDUCTION JRNL TITL 2 PROTEIN PII IN COMPLEX WITH PIPX. JRNL REF J.MOL.BIOL. V. 402 552 2010 JRNL REFN ISSN 0022-2836 JRNL PMID 20708625 JRNL DOI 10.1016/J.JMB.2010.08.006 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 19435 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1052 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1386 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.48 REMARK 3 BIN R VALUE (WORKING SET) : 0.2400 REMARK 3 BIN FREE R VALUE SET COUNT : 65 REMARK 3 BIN FREE R VALUE : 0.3320 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1602 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 37 REMARK 3 SOLVENT ATOMS : 133 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.40000 REMARK 3 B22 (A**2) : -0.40000 REMARK 3 B33 (A**2) : 0.59000 REMARK 3 B12 (A**2) : -0.20000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.144 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.098 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.394 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1660 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2238 ; 1.530 ; 1.987 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 196 ; 5.784 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 82 ;32.321 ;23.659 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 312 ;14.669 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;13.223 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 251 ; 0.114 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1218 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 978 ; 0.982 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1586 ; 1.770 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 682 ; 2.467 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 652 ; 4.053 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 108 REMARK 3 ORIGIN FOR THE GROUP (A): 24.5280 19.1860 32.1540 REMARK 3 T TENSOR REMARK 3 T11: 0.2149 T22: 0.2971 REMARK 3 T33: 0.0274 T12: -0.0019 REMARK 3 T13: 0.0451 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 1.9755 L22: 1.7198 REMARK 3 L33: 2.7783 L12: -0.1057 REMARK 3 L13: -0.2286 L23: -0.2678 REMARK 3 S TENSOR REMARK 3 S11: -0.0047 S12: -0.2389 S13: -0.1178 REMARK 3 S21: 0.2412 S22: -0.0086 S23: 0.1819 REMARK 3 S31: 0.0572 S32: -0.4158 S33: 0.0133 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 6 B 91 REMARK 3 ORIGIN FOR THE GROUP (A): 16.8740 15.4000 8.9690 REMARK 3 T TENSOR REMARK 3 T11: 0.1810 T22: 0.2242 REMARK 3 T33: 0.0810 T12: -0.0167 REMARK 3 T13: -0.0082 T23: 0.0115 REMARK 3 L TENSOR REMARK 3 L11: 5.0910 L22: 2.1248 REMARK 3 L33: 2.1694 L12: -0.3343 REMARK 3 L13: 2.7506 L23: 0.0271 REMARK 3 S TENSOR REMARK 3 S11: 0.1117 S12: -0.1057 S13: -0.2339 REMARK 3 S21: -0.0882 S22: 0.0223 S23: 0.1394 REMARK 3 S31: 0.0800 S32: -0.1447 S33: -0.1340 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3N5B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000059398. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-MAR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9194 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20553 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 88.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 8.800 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.36000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1QY7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6M AMMONIUM SULFATE, 0.1M TRIS-CL REMARK 280 PH8.5, 6.4% V/V GLYCEROL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 70.64500 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 35.32250 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 61.18036 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 128 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 PRO B 3 REMARK 465 GLU B 4 REMARK 465 ASN B 5 REMARK 465 GLN B 92 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS B 22 CB CYS B 22 SG -0.115 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 43 95.82 -61.82 REMARK 500 TYR A 46 -90.99 -113.43 REMARK 500 ASN A 108 -136.76 54.54 REMARK 500 ASP B 25 -167.20 -163.41 REMARK 500 ASP B 46 59.16 -101.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 113 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 93 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 94 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2NS1 RELATED DB: PDB REMARK 900 GLNK REMARK 900 RELATED ID: 2JJ4 RELATED DB: PDB REMARK 900 THE COMPLEX OF PII AND ACETYLGLUTAMATE KINASE REMARK 900 RELATED ID: 2EG2 RELATED DB: PDB REMARK 900 PII DBREF 3N5B A 1 112 UNP Q9L422 Q9L422_ANASP 1 112 DBREF 3N5B B 1 92 UNP Q8YZH5 Q8YZH5_ANASP 1 92 SEQADV 3N5B MET B -19 UNP Q8YZH5 EXPRESSION TAG SEQADV 3N5B GLY B -18 UNP Q8YZH5 EXPRESSION TAG SEQADV 3N5B SER B -17 UNP Q8YZH5 EXPRESSION TAG SEQADV 3N5B SER B -16 UNP Q8YZH5 EXPRESSION TAG SEQADV 3N5B HIS B -15 UNP Q8YZH5 EXPRESSION TAG SEQADV 3N5B HIS B -14 UNP Q8YZH5 EXPRESSION TAG SEQADV 3N5B HIS B -13 UNP Q8YZH5 EXPRESSION TAG SEQADV 3N5B HIS B -12 UNP Q8YZH5 EXPRESSION TAG SEQADV 3N5B HIS B -11 UNP Q8YZH5 EXPRESSION TAG SEQADV 3N5B HIS B -10 UNP Q8YZH5 EXPRESSION TAG SEQADV 3N5B SER B -9 UNP Q8YZH5 EXPRESSION TAG SEQADV 3N5B SER B -8 UNP Q8YZH5 EXPRESSION TAG SEQADV 3N5B GLY B -7 UNP Q8YZH5 EXPRESSION TAG SEQADV 3N5B LEU B -6 UNP Q8YZH5 EXPRESSION TAG SEQADV 3N5B VAL B -5 UNP Q8YZH5 EXPRESSION TAG SEQADV 3N5B PRO B -4 UNP Q8YZH5 EXPRESSION TAG SEQADV 3N5B ARG B -3 UNP Q8YZH5 EXPRESSION TAG SEQADV 3N5B GLY B -2 UNP Q8YZH5 EXPRESSION TAG SEQADV 3N5B SER B -1 UNP Q8YZH5 EXPRESSION TAG SEQADV 3N5B HIS B 0 UNP Q8YZH5 EXPRESSION TAG SEQRES 1 A 112 MET LYS LYS VAL GLU ALA ILE ILE ARG PRO PHE LYS LEU SEQRES 2 A 112 ASP GLU VAL LYS ILE ALA LEU VAL ASN ALA GLY ILE VAL SEQRES 3 A 112 GLY MET THR VAL SER GLU VAL ARG GLY PHE GLY ARG GLN SEQRES 4 A 112 LYS GLY GLN THR GLU ARG TYR ARG GLY SER GLU TYR THR SEQRES 5 A 112 VAL GLU PHE LEU GLN LYS LEU LYS VAL GLU ILE VAL VAL SEQRES 6 A 112 GLU ASP ASN GLN VAL ASP MET VAL VAL ASP LYS ILE ILE SEQRES 7 A 112 ALA ALA ALA ARG THR GLY GLU ILE GLY ASP GLY LYS ILE SEQRES 8 A 112 PHE ILE SER PRO VAL GLU GLN VAL ILE ARG ILE ARG THR SEQRES 9 A 112 GLY GLU LYS ASN THR GLU ALA VAL SEQRES 1 B 112 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 112 LEU VAL PRO ARG GLY SER HIS MET ASN PRO GLU ASN SER SEQRES 3 B 112 GLU THR TYR ILE ASN HIS PRO THR TRP GLY LEU LEU TYR SEQRES 4 B 112 ARG ILE CYS MET VAL ASP GLU SER GLN ASP LEU PHE THR SEQRES 5 B 112 THR LEU TYR ALA GLN ARG LEU PHE PHE LEU VAL GLY ASN SEQRES 6 B 112 ASP ILE LYS ALA ILE LYS PHE GLN PRO ILE GLY ARG THR SEQRES 7 B 112 GLU ALA ARG MET LEU LEU GLU ASN ARG LEU ARG ASN LEU SEQRES 8 B 112 ARG ARG ASN GLY GLN SER GLN GLU TYR ASP GLN LEU GLN SEQRES 9 B 112 SER VAL PHE GLN ARG THR PHE GLN HET ADP A 113 27 HET SO4 B 93 5 HET SO4 B 94 5 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM SO4 SULFATE ION FORMUL 3 ADP C10 H15 N5 O10 P2 FORMUL 4 SO4 2(O4 S 2-) FORMUL 6 HOH *133(H2 O) HELIX 1 1 ARG A 9 PHE A 11 5 3 HELIX 2 2 LYS A 12 ALA A 23 1 12 HELIX 3 3 GLU A 66 ASN A 68 5 3 HELIX 4 4 GLN A 69 ARG A 82 1 14 HELIX 5 5 LYS A 107 VAL A 112 5 6 HELIX 6 6 GLY B 56 GLY B 75 1 20 HELIX 7 7 GLN B 76 PHE B 91 1 16 SHEET 1 A 4 THR A 29 GLY A 35 0 SHEET 2 A 4 LEU A 56 VAL A 65 -1 O LYS A 58 N VAL A 33 SHEET 3 A 4 LYS A 2 ILE A 8 -1 N VAL A 4 O ILE A 63 SHEET 4 A 4 LYS A 90 PRO A 95 -1 O LYS A 90 N ILE A 7 SHEET 1 B 2 GLU A 44 ARG A 45 0 SHEET 2 B 2 GLU A 50 TYR A 51 -1 N TYR A 51 O GLU A 44 SHEET 1 C 5 TYR B 9 HIS B 12 0 SHEET 2 C 5 GLY B 16 ASP B 25 -1 O LEU B 18 N ILE B 10 SHEET 3 C 5 GLN B 28 THR B 33 -1 O LEU B 30 N CYS B 22 SHEET 4 C 5 PHE B 40 GLY B 44 -1 O PHE B 41 N PHE B 31 SHEET 5 C 5 PHE B 52 ILE B 55 -1 O GLN B 53 N LEU B 42 CISPEP 1 GLN B 37 ARG B 38 0 -3.52 SITE 1 AC1 22 ILE A 7 GLY A 27 MET A 28 THR A 29 SITE 2 AC1 22 GLY A 35 ARG A 38 GLN A 39 GLU A 62 SITE 3 AC1 22 ILE A 63 VAL A 64 ILE A 86 GLY A 87 SITE 4 AC1 22 ASP A 88 GLY A 89 LYS A 90 PHE A 92 SITE 5 AC1 22 ARG A 101 ARG A 103 VAL A 112 HOH A 124 SITE 6 AC1 22 HOH A 168 HOH A 171 SITE 1 AC2 7 PHE A 11 HOH A 135 TYR B 19 LEU B 34 SITE 2 AC2 7 ARG B 38 ARG B 89 THR B 90 SITE 1 AC3 5 ARG B 67 ARG B 69 ASN B 70 ARG B 73 SITE 2 AC3 5 HOH B 127 CRYST1 70.645 70.645 88.544 90.00 90.00 120.00 P 3 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014155 0.008173 0.000000 0.00000 SCALE2 0.000000 0.016345 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011294 0.00000