HEADER CELL CYCLE 28-MAY-10 3N89 TITLE KH DOMAINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: DEFECTIVE IN GERM LINE DEVELOPMENT PROTEIN 3, ISOFORM A; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 88-460; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 3 ORGANISM_COMMON: NEMATODE; SOURCE 4 ORGANISM_TAXID: 6239; SOURCE 5 GENE: GLD-3, T07F8.3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 GOLD PLYS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETM30 KEYWDS KH DOMAINS, RNA BINDING, GERMLINE DEVELOPMENT, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR K.NAKEL,S.A.HARTUNG,F.BONNEAU,C.R.ECKMANN,E.CONTI REVDAT 3 21-FEB-24 3N89 1 SEQADV REVDAT 2 03-NOV-10 3N89 1 JRNL REVDAT 1 22-SEP-10 3N89 0 JRNL AUTH K.NAKEL,S.A.HARTUNG,F.BONNEAU,C.R.ECKMANN,E.CONTI JRNL TITL FOUR KH DOMAINS OF THE C. ELEGANS BICAUDAL-C ORTHOLOG GLD-3 JRNL TITL 2 FORM A GLOBULAR STRUCTURAL PLATFORM. JRNL REF RNA V. 16 2058 2010 JRNL REFN ISSN 1355-8382 JRNL PMID 20823118 JRNL DOI 10.1261/RNA.2315010 REMARK 2 REMARK 2 RESOLUTION. 2.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.11 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 28617 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.259 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1489 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5274 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 43 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.75400 REMARK 3 B22 (A**2) : -0.57900 REMARK 3 B33 (A**2) : 2.33300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 3.44500 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.214 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.192 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.950 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.712 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.376 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 50.02 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : CNS_TOPPAR:ION.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3N89 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000059504. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-MAR-09; 25-FEB-09 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SLS; SLS REMARK 200 BEAMLINE : X06SA; X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979; 1.0 REMARK 200 MONOCHROMATOR : LN2 COOLED FIXED-EXIT SI(111) REMARK 200 MONOCHROMATOR; LN2 COOLED FIXED- REMARK 200 EXIT SI(111) MONOCHROMATOR REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD; MARMOSAIC REMARK 200 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28664 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.790 REMARK 200 RESOLUTION RANGE LOW (A) : 48.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 2.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.13400 REMARK 200 FOR THE DATA SET : 8.6100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.07 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.59300 REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUMSULFATE, HEPES, GLYCEROL, PH REMARK 280 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 79.75200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.12050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 79.75200 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 51.12050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 40.94174 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -72.89768 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 85 REMARK 465 ALA A 86 REMARK 465 MET A 87 REMARK 465 ALA A 88 REMARK 465 GLN A 92 REMARK 465 LEU A 93 REMARK 465 LYS A 94 REMARK 465 ALA A 95 REMARK 465 GLN A 96 REMARK 465 GLU A 227 REMARK 465 LYS A 228 REMARK 465 ASN A 229 REMARK 465 GLY A 230 REMARK 465 ILE A 231 REMARK 465 GLU A 262 REMARK 465 SER A 263 REMARK 465 CYS A 309 REMARK 465 TYR A 310 REMARK 465 ASN A 311 REMARK 465 ASN A 312 REMARK 465 ARG A 313 REMARK 465 ASN A 314 REMARK 465 GLU A 315 REMARK 465 THR A 316 REMARK 465 ARG A 317 REMARK 465 GLU A 358 REMARK 465 PRO A 359 REMARK 465 SER A 360 REMARK 465 ARG A 361 REMARK 465 VAL A 362 REMARK 465 SER A 363 REMARK 465 ASP A 364 REMARK 465 ARG A 365 REMARK 465 CYS A 455 REMARK 465 ARG A 456 REMARK 465 GLY A 457 REMARK 465 GLU A 458 REMARK 465 LEU A 459 REMARK 465 SER A 460 REMARK 465 GLY B 85 REMARK 465 ALA B 86 REMARK 465 MET B 87 REMARK 465 ALA B 88 REMARK 465 GLN B 92 REMARK 465 LEU B 93 REMARK 465 LYS B 94 REMARK 465 ALA B 95 REMARK 465 GLN B 96 REMARK 465 GLY B 97 REMARK 465 LEU B 98 REMARK 465 PRO B 99 REMARK 465 ASP B 153 REMARK 465 ARG B 154 REMARK 465 SER B 155 REMARK 465 VAL B 156 REMARK 465 GLY B 157 REMARK 465 GLY B 158 REMARK 465 ALA B 225 REMARK 465 PRO B 226 REMARK 465 GLU B 227 REMARK 465 LYS B 228 REMARK 465 ASN B 229 REMARK 465 GLY B 230 REMARK 465 ILE B 231 REMARK 465 VAL B 232 REMARK 465 ARG B 261 REMARK 465 GLU B 262 REMARK 465 SER B 263 REMARK 465 PRO B 264 REMARK 465 ALA B 265 REMARK 465 PRO B 266 REMARK 465 CYS B 309 REMARK 465 TYR B 310 REMARK 465 ASN B 311 REMARK 465 ASN B 312 REMARK 465 ARG B 313 REMARK 465 ASN B 314 REMARK 465 GLU B 315 REMARK 465 THR B 316 REMARK 465 ARG B 317 REMARK 465 SER B 360 REMARK 465 ARG B 361 REMARK 465 VAL B 362 REMARK 465 SER B 363 REMARK 465 ASP B 364 REMARK 465 ARG B 365 REMARK 465 ASP B 389 REMARK 465 LEU B 390 REMARK 465 LEU B 391 REMARK 465 SER B 392 REMARK 465 GLY B 393 REMARK 465 ARG B 456 REMARK 465 GLY B 457 REMARK 465 GLU B 458 REMARK 465 LEU B 459 REMARK 465 SER B 460 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 GLN A 216 REMARK 475 ALA A 265 REMARK 475 ALA A 357 REMARK 475 HIS A 368 REMARK 475 ASP B 131 REMARK 475 ASP B 224 REMARK 475 ASN B 268 REMARK 475 GLY B 375 REMARK 475 LEU B 448 REMARK 475 ASN B 452 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 HIS A 89 ND1 CD2 CE1 NE2 REMARK 480 ILE A 90 CG1 CG2 CD1 REMARK 480 ASP A 131 CA CB CG OD1 OD2 REMARK 480 ASN A 132 CA CB CG OD1 ND2 REMARK 480 ASP A 134 CA CB CG OD1 OD2 REMARK 480 HIS A 135 ND1 CE1 REMARK 480 ILE A 141 CG1 REMARK 480 GLU A 144 CG CD OE1 OE2 REMARK 480 SER A 155 C CB OG REMARK 480 VAL A 156 CB CG1 CG2 REMARK 480 THR A 159 O CB OG1 CG2 REMARK 480 THR A 160 CB OG1 CG2 REMARK 480 ARG A 181 CB REMARK 480 SER A 197 C O REMARK 480 LYS A 198 CD CE NZ REMARK 480 LYS A 200 CG CD CE NZ REMARK 480 HIS A 204 CG ND1 CD2 CE1 NE2 REMARK 480 GLN A 207 CD OE1 NE2 REMARK 480 ARG A 211 CB CG CD NE CZ NH1 NH2 REMARK 480 GLU A 219 CD OE1 OE2 REMARK 480 ALA A 225 CB REMARK 480 GLU A 242 CB CG CD OE1 OE2 REMARK 480 ARG A 254 CG CD NE NH1 NH2 REMARK 480 ARG A 261 NE CZ NH1 NH2 REMARK 480 ARG A 299 CG CD NE CZ NH1 NH2 REMARK 480 GLU A 300 CG OE1 OE2 REMARK 480 GLU A 322 CD OE1 OE2 REMARK 480 ARG A 337 CD NE REMARK 480 ASN A 353 CB CG OD1 ND2 REMARK 480 GLU A 373 CB CG CD OE1 OE2 REMARK 480 SER A 374 OG REMARK 480 GLU A 386 CB CG CD OE1 OE2 REMARK 480 ASP A 389 CA O CB CG OD1 OD2 REMARK 480 LEU A 390 CA CB CG CD1 CD2 REMARK 480 LEU A 391 CA CB CG CD1 CD2 REMARK 480 SER A 392 CA CB OG REMARK 480 GLY A 393 C O REMARK 480 LYS A 422 CG CD CE REMARK 480 ASP A 425 CA CB CG OD1 OD2 REMARK 480 ILE A 427 CD1 REMARK 480 ALA A 428 CB REMARK 480 ASN A 436 CB REMARK 480 HIS A 441 CB CG ND1 CD2 CE1 NE2 REMARK 480 ASN A 446 CB CG OD1 ND2 REMARK 480 ASN A 450 CB CG OD1 ND2 REMARK 480 ASN A 452 C O REMARK 480 HIS B 89 ND1 CD2 CE1 NE2 REMARK 480 ILE B 90 CG1 CG2 CD1 REMARK 480 PRO B 101 CD REMARK 480 MET B 106 CB CG SD CE REMARK 480 GLU B 108 CG CD OE1 REMARK 480 GLU B 119 CG CD OE1 OE2 REMARK 480 GLU B 121 CG CD OE1 OE2 REMARK 480 SER B 130 CB OG REMARK 480 ASN B 132 CB CG OD1 ND2 REMARK 480 ASP B 134 CG OD1 OD2 REMARK 480 HIS B 135 C CB CG ND1 CD2 CE1 NE2 REMARK 480 ASN B 137 CG OD1 ND2 REMARK 480 SER B 140 OG REMARK 480 GLU B 144 CG CD OE1 OE2 REMARK 480 THR B 159 O CB OG1 CG2 REMARK 480 THR B 160 CB OG1 CG2 REMARK 480 PHE B 174 CE1 CE2 CZ REMARK 480 ARG B 179 CB CG CD NE CZ REMARK 480 LYS B 198 CB CG CD CE NZ REMARK 480 LYS B 200 CB CG CD CE NZ REMARK 480 HIS B 204 ND1 CD2 CE1 NE2 REMARK 480 ARG B 211 CB CG CD NE CZ NH1 NH2 REMARK 480 GLU B 219 CB CG OE1 OE2 REMARK 480 THR B 233 CB OG1 REMARK 480 GLU B 242 CG CD OE1 OE2 REMARK 480 GLU B 250 CG CD OE1 OE2 REMARK 480 GLU B 257 CG CD OE1 OE2 REMARK 480 ILE B 258 CD1 REMARK 480 ASN B 269 CG OD1 ND2 REMARK 480 ARG B 299 CG CZ NH1 NH2 REMARK 480 ILE B 304 CD1 REMARK 480 GLY B 318 O REMARK 480 GLU B 322 CB CG CD OE1 OE2 REMARK 480 ILE B 329 CD1 REMARK 480 ARG B 337 CG CD NE CZ NH1 NH2 REMARK 480 ASN B 366 CG OD1 ND2 REMARK 480 MET B 369 CG SD CE REMARK 480 ASP B 372 CB CG OD1 OD2 REMARK 480 LYS B 379 CE NZ REMARK 480 PRO B 387 O REMARK 480 ALA B 388 O REMARK 480 GLU B 394 CG CD OE1 OE2 REMARK 480 SER B 401 OG REMARK 480 ARG B 403 CB CG REMARK 480 GLU B 406 CG REMARK 480 LYS B 411 CD CE NZ REMARK 480 LYS B 418 CE NZ REMARK 480 LYS B 422 CB CG CD CE NZ REMARK 480 ASP B 425 CG OD1 OD2 REMARK 480 ASN B 432 CB CG OD1 ND2 REMARK 480 ASP B 433 CG OD1 OD2 REMARK 480 ASP B 435 CG OD1 OD2 REMARK 480 ASN B 436 CG OD1 ND2 REMARK 480 HIS B 441 CB CG CD2 CE1 NE2 REMARK 480 MET B 453 CB CG SD CE REMARK 480 CYS B 455 CB SG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 105 104.61 -53.49 REMARK 500 SER A 130 131.32 -39.88 REMARK 500 ASN A 132 8.70 -65.70 REMARK 500 ASP A 153 60.63 -155.25 REMARK 500 LYS A 198 -19.00 75.88 REMARK 500 ASN A 268 43.60 -149.80 REMARK 500 SER A 289 45.63 -109.54 REMARK 500 PHE A 349 161.00 179.51 REMARK 500 PRO A 387 150.09 -46.12 REMARK 500 SER A 392 -158.00 -158.25 REMARK 500 SER A 404 174.73 161.55 REMARK 500 ASP A 425 69.12 27.08 REMARK 500 GLN A 430 76.70 -112.65 REMARK 500 PRO A 431 157.05 -49.27 REMARK 500 LYS A 449 64.47 -117.97 REMARK 500 PRO B 105 108.10 -39.60 REMARK 500 HIS B 135 2.71 -61.66 REMARK 500 ASN B 146 72.42 49.37 REMARK 500 SER B 197 -72.64 -72.79 REMARK 500 ASN B 213 56.76 -148.16 REMARK 500 ASN B 319 -13.50 76.34 REMARK 500 THR B 354 -8.95 -56.06 REMARK 500 GLU B 358 72.89 -115.20 REMARK 500 GLU B 373 0.55 -68.45 REMARK 500 SER B 404 -154.39 173.70 REMARK 500 SER B 421 -165.28 -62.29 REMARK 500 ASP B 425 73.38 53.68 REMARK 500 PRO B 431 151.24 -43.81 REMARK 500 LYS B 449 44.56 -150.64 REMARK 500 REMARK 500 REMARK: NULL DBREF 3N89 A 88 460 UNP Q95ZK7 Q95ZK7_CAEEL 88 460 DBREF 3N89 B 88 460 UNP Q95ZK7 Q95ZK7_CAEEL 88 460 SEQADV 3N89 GLY A 85 UNP Q95ZK7 EXPRESSION TAG SEQADV 3N89 ALA A 86 UNP Q95ZK7 EXPRESSION TAG SEQADV 3N89 MET A 87 UNP Q95ZK7 EXPRESSION TAG SEQADV 3N89 GLY B 85 UNP Q95ZK7 EXPRESSION TAG SEQADV 3N89 ALA B 86 UNP Q95ZK7 EXPRESSION TAG SEQADV 3N89 MET B 87 UNP Q95ZK7 EXPRESSION TAG SEQRES 1 A 376 GLY ALA MET ALA HIS ILE HIS GLN LEU LYS ALA GLN GLY SEQRES 2 A 376 LEU PRO LEU PRO SER ASN ILE PRO MET ILE GLU ILE ASN SEQRES 3 A 376 PRO THR ARG VAL THR LEU ASN MET GLU PHE GLU SER GLN SEQRES 4 A 376 TYR TYR SER LEU MET THR SER ASP ASN GLY ASP HIS GLU SEQRES 5 A 376 ASN VAL ALA SER ILE MET ALA GLU THR ASN THR LEU ILE SEQRES 6 A 376 GLN LEU PRO ASP ARG SER VAL GLY GLY THR THR PRO ASP SEQRES 7 A 376 PRO PHE ALA GLN GLN VAL THR ILE THR GLY TYR PHE GLY SEQRES 8 A 376 ASP VAL ASP ARG ALA ARG MET LEU MET ARG ARG ASN CYS SEQRES 9 A 376 HIS PHE THR VAL PHE MET ALA LEU SER LYS MET LYS MET SEQRES 10 A 376 PRO LEU HIS GLU LEU GLN ALA HIS VAL ARG GLN ASN PRO SEQRES 11 A 376 ILE GLN ASN VAL GLU MET SER PHE VAL ASP ALA PRO GLU SEQRES 12 A 376 LYS ASN GLY ILE VAL THR THR TYR LEU ARG ILE THR ALA SEQRES 13 A 376 ARG GLU LYS ASN GLN HIS GLU LEU ILE GLU ALA ALA LYS SEQRES 14 A 376 ARG LEU ASN GLU ILE LEU PHE ARG GLU SER PRO ALA PRO SEQRES 15 A 376 GLU ASN ASN PHE THR LEU HIS PHE THR LEU SER THR TYR SEQRES 16 A 376 TYR VAL ASP GLN VAL LEU GLY SER SER SER THR ALA GLN SEQRES 17 A 376 LEU MET PRO VAL ILE GLU ARG GLU THR THR THR ILE ILE SEQRES 18 A 376 SER TYR PRO CYS TYR ASN ASN ARG ASN GLU THR ARG GLY SEQRES 19 A 376 ASN ILE TYR GLU ILE LYS VAL VAL GLY ASN ILE ASP ASN SEQRES 20 A 376 VAL LEU LYS ALA ARG ARG TYR ILE MET ASP LEU LEU PRO SEQRES 21 A 376 ILE SER MET CYS PHE ASN ILE LYS ASN THR ASP MET ALA SEQRES 22 A 376 GLU PRO SER ARG VAL SER ASP ARG ASN ILE HIS MET ILE SEQRES 23 A 376 ILE ASP GLU SER GLY ILE ILE LEU LYS MET THR PRO SER SEQRES 24 A 376 VAL TYR GLU PRO ALA ASP LEU LEU SER GLY GLU VAL PRO SEQRES 25 A 376 LEU ASN CYS ALA SER LEU ARG SER LYS GLU PHE ASN ILE SEQRES 26 A 376 LYS LYS LEU TYR THR ALA TYR GLN LYS VAL LEU SER LYS SEQRES 27 A 376 LYS PHE ASP PHE ILE ALA PRO GLN PRO ASN ASP TYR ASP SEQRES 28 A 376 ASN SER ILE TRP HIS HIS SER LEU PRO ALA ASN PHE LEU SEQRES 29 A 376 LYS ASN PHE ASN MET PRO CYS ARG GLY GLU LEU SER SEQRES 1 B 376 GLY ALA MET ALA HIS ILE HIS GLN LEU LYS ALA GLN GLY SEQRES 2 B 376 LEU PRO LEU PRO SER ASN ILE PRO MET ILE GLU ILE ASN SEQRES 3 B 376 PRO THR ARG VAL THR LEU ASN MET GLU PHE GLU SER GLN SEQRES 4 B 376 TYR TYR SER LEU MET THR SER ASP ASN GLY ASP HIS GLU SEQRES 5 B 376 ASN VAL ALA SER ILE MET ALA GLU THR ASN THR LEU ILE SEQRES 6 B 376 GLN LEU PRO ASP ARG SER VAL GLY GLY THR THR PRO ASP SEQRES 7 B 376 PRO PHE ALA GLN GLN VAL THR ILE THR GLY TYR PHE GLY SEQRES 8 B 376 ASP VAL ASP ARG ALA ARG MET LEU MET ARG ARG ASN CYS SEQRES 9 B 376 HIS PHE THR VAL PHE MET ALA LEU SER LYS MET LYS MET SEQRES 10 B 376 PRO LEU HIS GLU LEU GLN ALA HIS VAL ARG GLN ASN PRO SEQRES 11 B 376 ILE GLN ASN VAL GLU MET SER PHE VAL ASP ALA PRO GLU SEQRES 12 B 376 LYS ASN GLY ILE VAL THR THR TYR LEU ARG ILE THR ALA SEQRES 13 B 376 ARG GLU LYS ASN GLN HIS GLU LEU ILE GLU ALA ALA LYS SEQRES 14 B 376 ARG LEU ASN GLU ILE LEU PHE ARG GLU SER PRO ALA PRO SEQRES 15 B 376 GLU ASN ASN PHE THR LEU HIS PHE THR LEU SER THR TYR SEQRES 16 B 376 TYR VAL ASP GLN VAL LEU GLY SER SER SER THR ALA GLN SEQRES 17 B 376 LEU MET PRO VAL ILE GLU ARG GLU THR THR THR ILE ILE SEQRES 18 B 376 SER TYR PRO CYS TYR ASN ASN ARG ASN GLU THR ARG GLY SEQRES 19 B 376 ASN ILE TYR GLU ILE LYS VAL VAL GLY ASN ILE ASP ASN SEQRES 20 B 376 VAL LEU LYS ALA ARG ARG TYR ILE MET ASP LEU LEU PRO SEQRES 21 B 376 ILE SER MET CYS PHE ASN ILE LYS ASN THR ASP MET ALA SEQRES 22 B 376 GLU PRO SER ARG VAL SER ASP ARG ASN ILE HIS MET ILE SEQRES 23 B 376 ILE ASP GLU SER GLY ILE ILE LEU LYS MET THR PRO SER SEQRES 24 B 376 VAL TYR GLU PRO ALA ASP LEU LEU SER GLY GLU VAL PRO SEQRES 25 B 376 LEU ASN CYS ALA SER LEU ARG SER LYS GLU PHE ASN ILE SEQRES 26 B 376 LYS LYS LEU TYR THR ALA TYR GLN LYS VAL LEU SER LYS SEQRES 27 B 376 LYS PHE ASP PHE ILE ALA PRO GLN PRO ASN ASP TYR ASP SEQRES 28 B 376 ASN SER ILE TRP HIS HIS SER LEU PRO ALA ASN PHE LEU SEQRES 29 B 376 LYS ASN PHE ASN MET PRO CYS ARG GLY GLU LEU SER FORMUL 3 HOH *43(H2 O) HELIX 1 1 GLU A 121 GLN A 123 5 3 HELIX 2 2 TYR A 124 SER A 130 1 7 HELIX 3 3 ASN A 137 ASN A 146 1 10 HELIX 4 4 PHE A 174 ASN A 187 1 14 HELIX 5 5 PRO A 202 ASN A 213 1 12 HELIX 6 6 ASN A 244 PHE A 260 1 17 HELIX 7 7 TYR A 280 LEU A 285 1 6 HELIX 8 8 GLN A 292 THR A 302 1 11 HELIX 9 9 ASN A 328 LEU A 342 1 15 HELIX 10 10 THR A 354 MET A 356 5 3 HELIX 11 11 ASN A 408 LEU A 420 1 13 HELIX 12 12 SER A 421 ASP A 425 5 5 HELIX 13 13 SER A 437 HIS A 441 5 5 HELIX 14 14 PRO A 444 LYS A 449 5 6 HELIX 15 15 GLU B 121 GLN B 123 5 3 HELIX 16 16 TYR B 124 THR B 129 1 6 HELIX 17 17 ASN B 137 GLU B 144 1 8 HELIX 18 18 PHE B 174 CYS B 188 1 15 HELIX 19 19 PRO B 202 GLN B 212 1 11 HELIX 20 20 ASN B 244 PHE B 260 1 17 HELIX 21 21 SER B 277 TYR B 279 5 3 HELIX 22 22 TYR B 280 LEU B 285 1 6 HELIX 23 23 GLN B 292 THR B 302 1 11 HELIX 24 24 ASN B 328 LEU B 342 1 15 HELIX 25 25 THR B 354 MET B 356 5 3 HELIX 26 26 ASN B 408 LEU B 420 1 13 HELIX 27 27 ILE B 438 LEU B 443 1 6 HELIX 28 28 PRO B 444 LYS B 449 5 6 SHEET 1 A 7 LEU A 148 GLN A 150 0 SHEET 2 A 7 GLN A 167 TYR A 173 -1 O THR A 171 N LEU A 148 SHEET 3 A 7 ARG A 113 GLU A 119 -1 N LEU A 116 O ILE A 170 SHEET 4 A 7 PRO A 344 LYS A 352 -1 O SER A 346 N ASN A 117 SHEET 5 A 7 VAL A 395 LYS A 405 -1 O SER A 404 N ILE A 345 SHEET 6 A 7 ILE A 377 TYR A 385 -1 N LYS A 379 O SER A 401 SHEET 7 A 7 HIS A 368 ILE A 371 -1 N HIS A 368 O MET A 380 SHEET 1 B 6 GLU A 219 ALA A 225 0 SHEET 2 B 6 THR A 233 ARG A 241 -1 O ARG A 237 N SER A 221 SHEET 3 B 6 HIS A 189 ALA A 195 -1 N VAL A 192 O ILE A 238 SHEET 4 B 6 PHE A 270 SER A 277 -1 O THR A 271 N PHE A 193 SHEET 5 B 6 ILE A 320 VAL A 326 -1 O TYR A 321 N LEU A 276 SHEET 6 B 6 ILE A 304 SER A 306 -1 N SER A 306 O LYS A 324 SHEET 1 C 7 LEU B 148 GLN B 150 0 SHEET 2 C 7 GLN B 167 TYR B 173 -1 O THR B 171 N LEU B 148 SHEET 3 C 7 ARG B 113 GLU B 119 -1 N MET B 118 O VAL B 168 SHEET 4 C 7 PRO B 344 LYS B 352 -1 O SER B 346 N ASN B 117 SHEET 5 C 7 VAL B 395 LYS B 405 -1 O ALA B 400 N PHE B 349 SHEET 6 C 7 ILE B 377 TYR B 385 -1 N ILE B 377 O ARG B 403 SHEET 7 C 7 HIS B 368 ILE B 371 -1 N HIS B 368 O MET B 380 SHEET 1 D 6 GLU B 219 VAL B 223 0 SHEET 2 D 6 TYR B 235 ARG B 241 -1 O ARG B 237 N SER B 221 SHEET 3 D 6 HIS B 189 ALA B 195 -1 N VAL B 192 O ILE B 238 SHEET 4 D 6 PHE B 270 LEU B 276 -1 O THR B 271 N PHE B 193 SHEET 5 D 6 TYR B 321 GLY B 327 -1 O TYR B 321 N LEU B 276 SHEET 6 D 6 ILE B 304 SER B 306 -1 N SER B 306 O LYS B 324 CISPEP 1 LEU A 98 PRO A 99 0 0.10 CRYST1 159.504 102.241 83.608 90.00 119.32 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006269 0.000000 0.003521 0.00000 SCALE2 0.000000 0.009781 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013718 0.00000