HEADER HYDROLASE 28-MAY-10 3N8G TITLE STRUCTURE OF THE (SR)CA2+-ATPASE CA2-E1-CAAMPPCP FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: SARCOPLASMIC/ENDOPLASMIC RETICULUM CALCIUM ATPASE 1 ISOFORM COMPND 3 SERCA 1A; COMPND 4 CHAIN: A; COMPND 5 EC: 3.6.3.8 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 3 ORGANISM_COMMON: EUROPEAN RABBIT,JAPANESE WHITE RABBIT,DOMESTIC SOURCE 4 RABBIT,RABBITS; SOURCE 5 ORGANISM_TAXID: 9986 KEYWDS ADENOSINE DIPHOSPHATE, ADENOSINE TRIPHOSPHATE, ALUMINUM COMPOUNDS, KEYWDS 2 CALCIUM-TRANSPORTING ATPASES, CRYSTALLIZATION, CYTOSOL, FLUORIDES, KEYWDS 3 MUSCLE FIBERS, FAST-TWITCH, PHOSPHORYLATION, PROTEIN CONFORMATION, KEYWDS 4 SARCOPLASMIC RETICULUM CALCIUM-TRANSPORTING ATPASES, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.BUBLITZ,C.OLESEN,H.POULSEN,J.P.MORTH,J.V.MOLLER,P.NISSEN REVDAT 6 06-SEP-23 3N8G 1 REMARK LINK REVDAT 5 19-MAR-14 3N8G 1 REMARK REVDAT 4 01-MAY-13 3N8G 1 JRNL REVDAT 3 27-FEB-13 3N8G 1 JRNL REVDAT 2 04-APR-12 3N8G 1 REMARK VERSN REVDAT 1 08-JUN-11 3N8G 0 JRNL AUTH M.BUBLITZ,M.MUSGAARD,H.POULSEN,L.THOGERSEN,C.OLESEN, JRNL AUTH 2 B.SCHIOTT,J.P.MORTH,J.V.MOLLER,P.NISSEN JRNL TITL ION PATHWAYS IN THE SARCOPLASMIC RETICULUM CA2+-ATPASE. JRNL REF J.BIOL.CHEM. V. 288 10759 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 23400778 JRNL DOI 10.1074/JBC.R112.436550 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.L.SORENSEN,J.V.MOLLER,P.NISSEN REMARK 1 TITL PHOSPHORYL TRANSFER AND CALCIUM ION OCCLUSION IN THE CALCIUM REMARK 1 TITL 2 PUMP. REMARK 1 REF SCIENCE V. 304 1672 2004 REMARK 1 REFN ISSN 0036-8075 REMARK 1 PMID 15192230 REMARK 1 DOI 10.1126/SCIENCE.1099366 REMARK 1 REFERENCE 2 REMARK 1 AUTH M.PICARD,A.M.JENSEN,T.L.SORENSEN,P.CHAMPEIL,J.V.MOLLER, REMARK 1 AUTH 2 P.NISSEN REMARK 1 TITL CA2+ VERSUS MG2+ COORDINATION AT THE NUCLEOTIDE-BINDING SITE REMARK 1 TITL 2 OF THE SARCOPLASMIC RETICULUM CA2+-ATPASE. REMARK 1 REF J.MOL.BIOL. V. 368 1 2007 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 17335848 REMARK 1 DOI 10.1016/J.JMB.2007.01.082 REMARK 2 REMARK 2 RESOLUTION. 2.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.1_357) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 54059 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.830 REMARK 3 FREE R VALUE TEST SET COUNT : 1529 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.1343 - 5.7361 0.98 4884 150 0.1902 0.2236 REMARK 3 2 5.7361 - 4.5580 1.00 4870 157 0.1763 0.2414 REMARK 3 3 4.5580 - 3.9833 1.00 4854 155 0.1640 0.1914 REMARK 3 4 3.9833 - 3.6197 1.00 4824 155 0.1835 0.2151 REMARK 3 5 3.6197 - 3.3607 1.00 4876 144 0.2047 0.2824 REMARK 3 6 3.3607 - 3.1627 1.00 4778 157 0.2335 0.2908 REMARK 3 7 3.1627 - 3.0045 1.00 4855 136 0.2272 0.2418 REMARK 3 8 3.0045 - 2.8738 1.00 4842 117 0.2308 0.2972 REMARK 3 9 2.8738 - 2.7633 1.00 4896 87 0.2360 0.3209 REMARK 3 10 2.7633 - 2.6680 1.00 4829 134 0.2604 0.2771 REMARK 3 11 2.6680 - 2.5846 0.84 4022 137 0.3112 0.3592 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 80.00 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 77.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.44740 REMARK 3 B22 (A**2) : -5.40490 REMARK 3 B33 (A**2) : 3.95750 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 2.33250 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 7845 REMARK 3 ANGLE : 1.093 10646 REMARK 3 CHIRALITY : 0.076 1235 REMARK 3 PLANARITY : 0.005 1359 REMARK 3 DIHEDRAL : 16.086 2933 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND ( RESID 45:122 OR RESID 238:329 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.7089 -9.4369 64.0738 REMARK 3 T TENSOR REMARK 3 T11: 0.5937 T22: 1.7096 REMARK 3 T33: 0.2822 T12: 0.0210 REMARK 3 T13: -0.0235 T23: -0.0225 REMARK 3 L TENSOR REMARK 3 L11: 0.2703 L22: 0.6209 REMARK 3 L33: 0.0476 L12: -0.2486 REMARK 3 L13: -0.0006 L23: 0.0844 REMARK 3 S TENSOR REMARK 3 S11: -0.0145 S12: -0.0772 S13: -0.0799 REMARK 3 S21: -0.1984 S22: 0.2756 S23: 0.0479 REMARK 3 S31: 0.5500 S32: 0.3655 S33: -0.2101 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND ( RESID 742:994 OR RESID 1003:1004 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.2545 9.8833 71.6019 REMARK 3 T TENSOR REMARK 3 T11: 0.7425 T22: 2.0100 REMARK 3 T33: 0.3474 T12: -0.2183 REMARK 3 T13: -0.0200 T23: -0.2185 REMARK 3 L TENSOR REMARK 3 L11: -0.0473 L22: 0.1650 REMARK 3 L33: 0.1960 L12: 0.0149 REMARK 3 L13: 0.0072 L23: 0.1243 REMARK 3 S TENSOR REMARK 3 S11: -0.2255 S12: -0.4821 S13: 0.0669 REMARK 3 S21: 0.0320 S22: 0.1051 S23: -0.1591 REMARK 3 S31: -0.7251 S32: 0.6170 S33: 0.1065 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND ( RESID 1:44 OR RESID 123:237 OR RESID REMARK 3 330:741 OR RESID 1001:1001 OR RESID 1006:1006 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.5533 -4.4779 11.6651 REMARK 3 T TENSOR REMARK 3 T11: 0.1733 T22: 0.1465 REMARK 3 T33: 0.2311 T12: 0.0032 REMARK 3 T13: -0.0408 T23: -0.0457 REMARK 3 L TENSOR REMARK 3 L11: 2.7830 L22: 0.5117 REMARK 3 L33: 2.4810 L12: 0.1032 REMARK 3 L13: 0.4637 L23: -0.1856 REMARK 3 S TENSOR REMARK 3 S11: 0.3800 S12: -0.2566 S13: -0.3095 REMARK 3 S21: -0.0473 S22: -0.2713 S23: 0.1006 REMARK 3 S31: -0.0100 S32: -0.1560 S33: -0.1206 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3N8G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000059511. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JAN-04; 04-FEB-04; 04-FEB-04 REMARK 200 TEMPERATURE (KELVIN) : NULL; NULL; NULL REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y; Y REMARK 200 RADIATION SOURCE : BESSY; ESRF; ESRF REMARK 200 BEAMLINE : 14.1; ID29; ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M; M REMARK 200 WAVELENGTH OR RANGE (A) : NULL; NULL; NULL REMARK 200 MONOCHROMATOR : NULL; NULL; NULL REMARK 200 OPTICS : NULL; NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD; CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH; ADSC QUANTUM 4; REMARK 200 ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53349 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.75000 REMARK 200 R SYM FOR SHELL (I) : 0.75000 REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH; SINGLE REMARK 200 WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: RE-REFINEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 1T5S REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 6000, TER-BUTANOL, SODIUM ACETATE, REMARK 280 POTASSIUM CHLORIDE, MAGNESIUM CHLORIDE, GLYCEROL, MOPS, PH 6.8, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 929KK, TEMPERATURE REMARK 280 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 81.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 81.00000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 38.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 43 -108.04 -12.64 REMARK 500 LYS A 47 -117.01 69.61 REMARK 500 ASP A 59 -156.82 -66.04 REMARK 500 LEU A 60 -69.52 -104.34 REMARK 500 PHE A 78 41.11 -80.93 REMARK 500 GLU A 79 -5.58 59.22 REMARK 500 GLU A 80 -155.85 -125.69 REMARK 500 GLU A 82 -46.40 124.48 REMARK 500 THR A 84 -79.01 -36.26 REMARK 500 VAL A 155 122.96 -30.65 REMARK 500 MET A 239 119.16 108.35 REMARK 500 ALA A 241 71.86 56.05 REMARK 500 ASP A 245 -138.63 -90.94 REMARK 500 HIS A 278 24.00 -72.16 REMARK 500 TRP A 288 27.03 -75.29 REMARK 500 ILE A 289 -40.56 -147.33 REMARK 500 LYS A 352 -64.93 -90.47 REMARK 500 THR A 355 -69.29 -103.44 REMARK 500 PRO A 391 36.77 -72.57 REMARK 500 ASN A 453 60.76 30.87 REMARK 500 ALA A 501 -81.19 -64.57 REMARK 500 LYS A 502 -6.72 -55.23 REMARK 500 ALA A 506 34.39 -79.92 REMARK 500 ALA A 507 10.08 -173.61 REMARK 500 GLU A 588 55.06 -90.54 REMARK 500 ASP A 601 79.04 -159.64 REMARK 500 GLU A 646 122.30 -26.10 REMARK 500 ASP A 695 51.74 38.74 REMARK 500 ASP A 703 -17.19 -148.56 REMARK 500 ALA A 714 175.96 -58.47 REMARK 500 PRO A 789 -51.13 -28.88 REMARK 500 MET A 857 -100.56 -104.25 REMARK 500 TYR A 858 -2.71 -53.35 REMARK 500 THR A 866 149.50 56.03 REMARK 500 TYR A 867 147.32 -35.30 REMARK 500 HIS A 868 -6.57 89.32 REMARK 500 LEU A 870 -4.42 59.96 REMARK 500 THR A 871 -59.23 107.36 REMARK 500 HIS A 872 -162.75 -125.40 REMARK 500 GLN A 875 -75.55 -68.00 REMARK 500 CYS A 876 -97.81 82.73 REMARK 500 THR A 877 -108.08 -82.07 REMARK 500 ASP A 879 91.57 61.25 REMARK 500 PRO A 881 73.33 0.67 REMARK 500 HIS A 882 87.33 -47.43 REMARK 500 PHE A 883 78.90 -115.19 REMARK 500 CYS A 888 -73.01 -76.97 REMARK 500 ILE A 890 -66.10 14.83 REMARK 500 GLU A 892 0.78 107.37 REMARK 500 SER A 915 33.17 -97.28 REMARK 500 REMARK 500 THIS ENTRY HAS 53 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA A 4 HIS A 5 148.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1003 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 304 O REMARK 620 2 ALA A 305 O 89.1 REMARK 620 3 ILE A 307 O 94.4 108.9 REMARK 620 4 GLU A 309 OE1 72.0 159.6 80.9 REMARK 620 5 GLU A 309 OE2 117.2 153.5 68.4 46.4 REMARK 620 6 ASN A 796 OD1 78.0 92.3 157.5 76.6 96.0 REMARK 620 7 ASP A 800 OD2 151.1 69.7 110.7 124.6 86.3 83.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1002 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 351 OD2 REMARK 620 2 THR A 353 O 77.5 REMARK 620 3 ASP A 703 OD2 73.1 84.2 REMARK 620 4 HOH A 995 O 150.5 131.6 110.0 REMARK 620 5 ACP A1001 O3G 73.5 97.8 145.2 94.6 REMARK 620 6 HOH A1023 O 77.0 151.1 75.6 75.6 87.8 REMARK 620 7 HOH A1025 O 159.5 85.3 94.3 48.9 120.4 116.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A1006 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 711 O REMARK 620 2 LYS A 712 O 75.1 REMARK 620 3 ALA A 714 O 96.1 75.1 REMARK 620 4 GLU A 732 OE1 89.5 157.7 123.4 REMARK 620 5 GLU A 732 OE2 107.9 131.2 147.8 38.7 REMARK 620 6 HOH A1028 O 84.6 80.3 154.3 82.3 52.5 REMARK 620 7 HOH A1091 O 130.3 59.8 54.8 139.5 117.0 105.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1004 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 768 OD1 REMARK 620 2 GLU A 771 OE2 94.1 REMARK 620 3 THR A 799 OG1 150.0 93.9 REMARK 620 4 ASP A 800 OD1 85.8 176.0 84.2 REMARK 620 5 ASP A 800 OD2 73.4 137.6 117.3 46.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACP A 1001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1T5S RELATED DB: PDB REMARK 900 THE SAME STRUCTURE PREVIOUSLY MODELED AS MGAMPPCP COMPLEX. DBREF 3N8G A 1 994 UNP B6CAM1 B6CAM1_RABIT 1 994 SEQRES 1 A 994 MET GLU ALA ALA HIS SER LYS SER THR GLU GLU CYS LEU SEQRES 2 A 994 ALA TYR PHE GLY VAL SER GLU THR THR GLY LEU THR PRO SEQRES 3 A 994 ASP GLN VAL LYS ARG HIS LEU GLU LYS TYR GLY HIS ASN SEQRES 4 A 994 GLU LEU PRO ALA GLU GLU GLY LYS SER LEU TRP GLU LEU SEQRES 5 A 994 VAL ILE GLU GLN PHE GLU ASP LEU LEU VAL ARG ILE LEU SEQRES 6 A 994 LEU LEU ALA ALA CYS ILE SER PHE VAL LEU ALA TRP PHE SEQRES 7 A 994 GLU GLU GLY GLU GLU THR ILE THR ALA PHE VAL GLU PRO SEQRES 8 A 994 PHE VAL ILE LEU LEU ILE LEU ILE ALA ASN ALA ILE VAL SEQRES 9 A 994 GLY VAL TRP GLN GLU ARG ASN ALA GLU ASN ALA ILE GLU SEQRES 10 A 994 ALA LEU LYS GLU TYR GLU PRO GLU MET GLY LYS VAL TYR SEQRES 11 A 994 ARG ALA ASP ARG LYS SER VAL GLN ARG ILE LYS ALA ARG SEQRES 12 A 994 ASP ILE VAL PRO GLY ASP ILE VAL GLU VAL ALA VAL GLY SEQRES 13 A 994 ASP LYS VAL PRO ALA ASP ILE ARG ILE LEU SER ILE LYS SEQRES 14 A 994 SER THR THR LEU ARG VAL ASP GLN SER ILE LEU THR GLY SEQRES 15 A 994 GLU SER VAL SER VAL ILE LYS HIS THR GLU PRO VAL PRO SEQRES 16 A 994 ASP PRO ARG ALA VAL ASN GLN ASP LYS LYS ASN MET LEU SEQRES 17 A 994 PHE SER GLY THR ASN ILE ALA ALA GLY LYS ALA LEU GLY SEQRES 18 A 994 ILE VAL ALA THR THR GLY VAL SER THR GLU ILE GLY LYS SEQRES 19 A 994 ILE ARG ASP GLN MET ALA ALA THR GLU GLN ASP LYS THR SEQRES 20 A 994 PRO LEU GLN GLN LYS LEU ASP GLU PHE GLY GLU GLN LEU SEQRES 21 A 994 SER LYS VAL ILE SER LEU ILE CYS VAL ALA VAL TRP LEU SEQRES 22 A 994 ILE ASN ILE GLY HIS PHE ASN ASP PRO VAL HIS GLY GLY SEQRES 23 A 994 SER TRP ILE ARG GLY ALA ILE TYR TYR PHE LYS ILE ALA SEQRES 24 A 994 VAL ALA LEU ALA VAL ALA ALA ILE PRO GLU GLY LEU PRO SEQRES 25 A 994 ALA VAL ILE THR THR CYS LEU ALA LEU GLY THR ARG ARG SEQRES 26 A 994 MET ALA LYS LYS ASN ALA ILE VAL ARG SER LEU PRO SER SEQRES 27 A 994 VAL GLU THR LEU GLY CYS THR SER VAL ILE CYS SER ASP SEQRES 28 A 994 LYS THR GLY THR LEU THR THR ASN GLN MET SER VAL CYS SEQRES 29 A 994 LYS MET PHE ILE ILE ASP LYS VAL ASP GLY ASP PHE CYS SEQRES 30 A 994 SER LEU ASN GLU PHE SER ILE THR GLY SER THR TYR ALA SEQRES 31 A 994 PRO GLU GLY GLU VAL LEU LYS ASN ASP LYS PRO ILE ARG SEQRES 32 A 994 SER GLY GLN PHE ASP GLY LEU VAL GLU LEU ALA THR ILE SEQRES 33 A 994 CYS ALA LEU CYS ASN ASP SER SER LEU ASP PHE ASN GLU SEQRES 34 A 994 THR LYS GLY VAL TYR GLU LYS VAL GLY GLU ALA THR GLU SEQRES 35 A 994 THR ALA LEU THR THR LEU VAL GLU LYS MET ASN VAL PHE SEQRES 36 A 994 ASN THR GLU VAL ARG ASN LEU SER LYS VAL GLU ARG ALA SEQRES 37 A 994 ASN ALA CYS ASN SER VAL ILE ARG GLN LEU MET LYS LYS SEQRES 38 A 994 GLU PHE THR LEU GLU PHE SER ARG ASP ARG LYS SER MET SEQRES 39 A 994 SER VAL TYR CYS SER PRO ALA LYS SER SER ARG ALA ALA SEQRES 40 A 994 VAL GLY ASN LYS MET PHE VAL LYS GLY ALA PRO GLU GLY SEQRES 41 A 994 VAL ILE ASP ARG CYS ASN TYR VAL ARG VAL GLY THR THR SEQRES 42 A 994 ARG VAL PRO MET THR GLY PRO VAL LYS GLU LYS ILE LEU SEQRES 43 A 994 SER VAL ILE LYS GLU TRP GLY THR GLY ARG ASP THR LEU SEQRES 44 A 994 ARG CYS LEU ALA LEU ALA THR ARG ASP THR PRO PRO LYS SEQRES 45 A 994 ARG GLU GLU MET VAL LEU ASP ASP SER SER ARG PHE MET SEQRES 46 A 994 GLU TYR GLU THR ASP LEU THR PHE VAL GLY VAL VAL GLY SEQRES 47 A 994 MET LEU ASP PRO PRO ARG LYS GLU VAL MET GLY SER ILE SEQRES 48 A 994 GLN LEU CYS ARG ASP ALA GLY ILE ARG VAL ILE MET ILE SEQRES 49 A 994 THR GLY ASP ASN LYS GLY THR ALA ILE ALA ILE CYS ARG SEQRES 50 A 994 ARG ILE GLY ILE PHE GLY GLU ASN GLU GLU VAL ALA ASP SEQRES 51 A 994 ARG ALA TYR THR GLY ARG GLU PHE ASP ASP LEU PRO LEU SEQRES 52 A 994 ALA GLU GLN ARG GLU ALA CYS ARG ARG ALA CYS CYS PHE SEQRES 53 A 994 ALA ARG VAL GLU PRO SER HIS LYS SER LYS ILE VAL GLU SEQRES 54 A 994 TYR LEU GLN SER TYR ASP GLU ILE THR ALA MET THR GLY SEQRES 55 A 994 ASP GLY VAL ASN ASP ALA PRO ALA LEU LYS LYS ALA GLU SEQRES 56 A 994 ILE GLY ILE ALA MET GLY SER GLY THR ALA VAL ALA LYS SEQRES 57 A 994 THR ALA SER GLU MET VAL LEU ALA ASP ASP ASN PHE SER SEQRES 58 A 994 THR ILE VAL ALA ALA VAL GLU GLU GLY ARG ALA ILE TYR SEQRES 59 A 994 ASN ASN MET LYS GLN PHE ILE ARG TYR LEU ILE SER SER SEQRES 60 A 994 ASN VAL GLY GLU VAL VAL CYS ILE PHE LEU THR ALA ALA SEQRES 61 A 994 LEU GLY LEU PRO GLU ALA LEU ILE PRO VAL GLN LEU LEU SEQRES 62 A 994 TRP VAL ASN LEU VAL THR ASP GLY LEU PRO ALA THR ALA SEQRES 63 A 994 LEU GLY PHE ASN PRO PRO ASP LEU ASP ILE MET ASP ARG SEQRES 64 A 994 PRO PRO ARG SER PRO LYS GLU PRO LEU ILE SER GLY TRP SEQRES 65 A 994 LEU PHE PHE ARG TYR MET ALA ILE GLY GLY TYR VAL GLY SEQRES 66 A 994 ALA ALA THR VAL GLY ALA ALA ALA TRP TRP PHE MET TYR SEQRES 67 A 994 ALA GLU ASP GLY PRO GLY VAL THR TYR HIS GLN LEU THR SEQRES 68 A 994 HIS PHE MET GLN CYS THR GLU ASP HIS PRO HIS PHE GLU SEQRES 69 A 994 GLY LEU ASP CYS GLU ILE PHE GLU ALA PRO GLU PRO MET SEQRES 70 A 994 THR MET ALA LEU SER VAL LEU VAL THR ILE GLU MET CYS SEQRES 71 A 994 ASN ALA LEU ASN SER LEU SER GLU ASN GLN SER LEU MET SEQRES 72 A 994 ARG MET PRO PRO TRP VAL ASN ILE TRP LEU LEU GLY SER SEQRES 73 A 994 ILE CYS LEU SER MET SER LEU HIS PHE LEU ILE LEU TYR SEQRES 74 A 994 VAL ASP PRO LEU PRO MET ILE PHE LYS LEU LYS ALA LEU SEQRES 75 A 994 ASP LEU THR GLN TRP LEU MET VAL LEU LYS ILE SER LEU SEQRES 76 A 994 PRO VAL ILE GLY LEU ASP GLU ILE LEU LYS PHE ILE ALA SEQRES 77 A 994 ARG ASN TYR LEU GLU GLY HET CA A1002 1 HET CA A1003 1 HET CA A1004 1 HET K A1006 1 HET ACP A1001 31 HETNAM CA CALCIUM ION HETNAM K POTASSIUM ION HETNAM ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER HETSYN ACP ADENOSINE-5'-[BETA, GAMMA-METHYLENE]TRIPHOSPHATE FORMUL 2 CA 3(CA 2+) FORMUL 5 K K 1+ FORMUL 6 ACP C11 H18 N5 O12 P3 FORMUL 7 HOH *92(H2 O) HELIX 1 1 SER A 8 GLY A 17 1 10 HELIX 2 2 THR A 25 GLY A 37 1 13 HELIX 3 3 LEU A 49 GLU A 55 1 7 HELIX 4 4 LEU A 60 LEU A 75 1 16 HELIX 5 5 ILE A 85 GLU A 123 1 39 HELIX 6 6 ARG A 143 ILE A 145 5 3 HELIX 7 7 GLN A 177 GLY A 182 1 6 HELIX 8 8 VAL A 200 LYS A 204 5 5 HELIX 9 9 THR A 230 ILE A 235 1 6 HELIX 10 10 THR A 247 ASN A 275 1 29 HELIX 11 11 ASP A 281 GLY A 285 5 5 HELIX 12 12 ILE A 289 ILE A 307 1 19 HELIX 13 13 GLY A 310 LYS A 329 1 20 HELIX 14 14 PRO A 337 CYS A 344 1 8 HELIX 15 15 ARG A 403 GLN A 406 5 4 HELIX 16 16 PHE A 407 CYS A 420 1 14 HELIX 17 17 GLU A 439 ASN A 453 1 15 HELIX 18 18 SER A 463 ALA A 468 1 6 HELIX 19 19 ASN A 469 GLN A 477 1 9 HELIX 20 20 ALA A 517 ARG A 524 1 8 HELIX 21 21 THR A 538 GLY A 555 1 18 HELIX 22 22 LYS A 572 MET A 576 5 5 HELIX 23 23 ASP A 580 SER A 582 5 3 HELIX 24 24 ARG A 583 GLU A 588 1 6 HELIX 25 25 GLU A 606 ALA A 617 1 12 HELIX 26 26 ASN A 628 ILE A 639 1 12 HELIX 27 27 GLY A 655 ASP A 660 1 6 HELIX 28 28 PRO A 662 ALA A 673 1 12 HELIX 29 29 GLU A 680 SER A 693 1 14 HELIX 30 30 GLY A 704 ASN A 706 5 3 HELIX 31 31 ASP A 707 ALA A 714 1 8 HELIX 32 32 THR A 724 ALA A 730 1 7 HELIX 33 33 PHE A 740 GLY A 782 1 43 HELIX 34 34 ILE A 788 ASP A 800 1 13 HELIX 35 35 GLY A 801 LEU A 807 1 7 HELIX 36 36 GLY A 808 ASN A 810 5 3 HELIX 37 37 SER A 830 MET A 857 1 28 HELIX 38 38 ALA A 893 ALA A 912 1 20 HELIX 39 39 LEU A 913 SER A 917 5 5 HELIX 40 40 PRO A 926 VAL A 929 5 4 HELIX 41 41 ASN A 930 VAL A 950 1 21 HELIX 42 42 PRO A 952 LYS A 958 1 7 HELIX 43 43 LEU A 962 LEU A 975 1 14 HELIX 44 44 LEU A 975 TYR A 991 1 17 SHEET 1 A 6 GLN A 138 LYS A 141 0 SHEET 2 A 6 MET A 126 TYR A 130 -1 N VAL A 129 O GLN A 138 SHEET 3 A 6 ILE A 150 ALA A 154 -1 O ILE A 150 N TYR A 130 SHEET 4 A 6 LYS A 218 THR A 225 -1 O GLY A 221 N VAL A 151 SHEET 5 A 6 ASP A 162 ILE A 168 -1 N SER A 167 O LEU A 220 SHEET 6 A 6 MET A 207 LEU A 208 -1 O LEU A 208 N ILE A 163 SHEET 1 B 3 VAL A 187 ILE A 188 0 SHEET 2 B 3 ARG A 174 ASP A 176 -1 N VAL A 175 O VAL A 187 SHEET 3 B 3 ASN A 213 ALA A 216 -1 O ASN A 213 N ASP A 176 SHEET 1 C 8 ALA A 331 VAL A 333 0 SHEET 2 C 8 MET A 733 LEU A 735 -1 O VAL A 734 N ILE A 332 SHEET 3 C 8 ILE A 716 MET A 720 1 N ALA A 719 O LEU A 735 SHEET 4 C 8 THR A 698 GLY A 702 1 N MET A 700 O ILE A 718 SHEET 5 C 8 VAL A 347 ASP A 351 1 N CYS A 349 O ALA A 699 SHEET 6 C 8 ARG A 620 ILE A 624 1 O ARG A 620 N ILE A 348 SHEET 7 C 8 CYS A 675 ALA A 677 1 O PHE A 676 N MET A 623 SHEET 8 C 8 ALA A 652 THR A 654 1 N TYR A 653 O ALA A 677 SHEET 1 D 9 LYS A 400 PRO A 401 0 SHEET 2 D 9 VAL A 395 LYS A 397 -1 N LYS A 397 O LYS A 400 SHEET 3 D 9 PHE A 376 ILE A 384 -1 N SER A 383 O LEU A 396 SHEET 4 D 9 SER A 362 ASP A 373 -1 N ASP A 370 O SER A 378 SHEET 5 D 9 LEU A 591 LEU A 600 -1 O GLY A 598 N LYS A 365 SHEET 6 D 9 ARG A 560 ARG A 567 -1 N THR A 566 O THR A 592 SHEET 7 D 9 LYS A 511 GLY A 516 -1 N VAL A 514 O ALA A 565 SHEET 8 D 9 SER A 493 PRO A 500 -1 N CYS A 498 O LYS A 511 SHEET 9 D 9 MET A 479 SER A 488 -1 N PHE A 483 O TYR A 497 SHEET 1 E 7 LYS A 400 PRO A 401 0 SHEET 2 E 7 VAL A 395 LYS A 397 -1 N LYS A 397 O LYS A 400 SHEET 3 E 7 PHE A 376 ILE A 384 -1 N SER A 383 O LEU A 396 SHEET 4 E 7 SER A 362 ASP A 373 -1 N ASP A 370 O SER A 378 SHEET 5 E 7 LEU A 591 LEU A 600 -1 O GLY A 598 N LYS A 365 SHEET 6 E 7 CYS A 525 VAL A 530 1 N ARG A 529 O PHE A 593 SHEET 7 E 7 THR A 533 PRO A 536 -1 O VAL A 535 N VAL A 528 SHEET 1 F 2 SER A 424 ASN A 428 0 SHEET 2 F 2 VAL A 433 VAL A 437 -1 O GLU A 435 N ASP A 426 LINK O VAL A 304 CA CA A1003 1555 1555 2.75 LINK O ALA A 305 CA CA A1003 1555 1555 2.64 LINK O ILE A 307 CA CA A1003 1555 1555 2.51 LINK OE1 GLU A 309 CA CA A1003 1555 1555 2.62 LINK OE2 GLU A 309 CA CA A1003 1555 1555 2.94 LINK OD2 ASP A 351 CA CA A1002 1555 1555 2.63 LINK O THR A 353 CA CA A1002 1555 1555 2.34 LINK OD2 ASP A 703 CA CA A1002 1555 1555 2.58 LINK O LEU A 711 K K A1006 1555 1555 3.14 LINK O LYS A 712 K K A1006 1555 1555 3.23 LINK O ALA A 714 K K A1006 1555 1555 3.07 LINK OE1 GLU A 732 K K A1006 1555 1555 3.22 LINK OE2 GLU A 732 K K A1006 1555 1555 3.41 LINK OD1 ASN A 768 CA CA A1004 1555 1555 2.56 LINK OE2 GLU A 771 CA CA A1004 1555 1555 2.73 LINK OD1 ASN A 796 CA CA A1003 1555 1555 2.54 LINK OG1 THR A 799 CA CA A1004 1555 1555 2.64 LINK OD2 ASP A 800 CA CA A1003 1555 1555 2.81 LINK OD1 ASP A 800 CA CA A1004 1555 1555 2.52 LINK OD2 ASP A 800 CA CA A1004 1555 1555 2.97 LINK O HOH A 995 CA CA A1002 1555 1555 3.13 LINK O3G ACP A1001 CA CA A1002 1555 1555 2.43 LINK CA CA A1002 O HOH A1023 1555 1555 2.45 LINK CA CA A1002 O HOH A1025 1555 1555 2.73 LINK K K A1006 O HOH A1028 1555 1555 3.40 LINK K K A1006 O HOH A1091 1555 1555 3.43 SITE 1 AC1 6 ASP A 351 THR A 353 ASP A 703 ACP A1001 SITE 2 AC1 6 HOH A1023 HOH A1025 SITE 1 AC2 6 VAL A 304 ALA A 305 ILE A 307 GLU A 309 SITE 2 AC2 6 ASN A 796 ASP A 800 SITE 1 AC3 5 ASN A 768 GLU A 771 THR A 799 ASP A 800 SITE 2 AC3 5 GLU A 908 SITE 1 AC4 4 LEU A 711 LYS A 712 ALA A 714 GLU A 732 SITE 1 AC5 21 ASP A 351 LYS A 352 THR A 353 GLU A 442 SITE 2 AC5 21 PHE A 487 ARG A 489 MET A 494 LYS A 515 SITE 3 AC5 21 GLY A 516 ALA A 517 ARG A 560 LEU A 562 SITE 4 AC5 21 THR A 625 GLY A 626 ASP A 627 ARG A 678 SITE 5 AC5 21 LYS A 684 ASN A 706 HOH A 997 CA A1002 SITE 6 AC5 21 HOH A1046 CRYST1 162.000 76.000 151.000 90.00 108.00 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006173 0.000000 0.002006 0.00000 SCALE2 0.000000 0.013158 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006963 0.00000