HEADER HYDROLASE 28-MAY-10 3N8U
TITLE CRYSTAL STRUCTURE OF AN IMELYSIN PEPTIDASE (BACOVA_03801) FROM
TITLE 2 BACTEROIDES OVATUS AT 1.44 A RESOLUTION
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: IMELYSIN PEPTIDASE;
COMPND 3 CHAIN: A, B;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES OVATUS;
SOURCE 3 ORGANISM_TAXID: 411476;
SOURCE 4 STRAIN: ATCC 8483;
SOURCE 5 GENE: BACOVA_03801;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100;
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET
KEYWDS STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG,
KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI-2, HYDROLASE
EXPDTA X-RAY DIFFRACTION
AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG)
REVDAT 5 30-OCT-24 3N8U 1 REMARK
REVDAT 4 01-FEB-23 3N8U 1 REMARK SEQADV LINK
REVDAT 3 08-NOV-17 3N8U 1 REMARK
REVDAT 2 10-AUG-11 3N8U 1 JRNL VERSN
REVDAT 1 28-JUL-10 3N8U 0
JRNL AUTH Q.XU,N.D.RAWLINGS,C.L.FARR,H.J.CHIU,J.C.GRANT,L.JAROSZEWSKI,
JRNL AUTH 2 H.E.KLOCK,M.W.KNUTH,M.D.MILLER,D.WEEKES,M.A.ELSLIGER,
JRNL AUTH 3 A.M.DEACON,A.GODZIK,S.A.LESLEY,I.A.WILSON
JRNL TITL STRUCTURAL AND SEQUENCE ANALYSIS OF IMELYSIN-LIKE PROTEINS
JRNL TITL 2 IMPLICATED IN BACTERIAL IRON UPTAKE.
JRNL REF PLOS ONE V. 6 21875 2011
JRNL REFN ESSN 1932-6203
JRNL PMID 21799754
JRNL DOI 10.1371/JOURNAL.PONE.0021875
REMARK 2
REMARK 2 RESOLUTION. 1.44 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : NULL
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.44
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.74
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : NULL
REMARK 3 NUMBER OF REFLECTIONS : 132168
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.168
REMARK 3 R VALUE (WORKING SET) : 0.167
REMARK 3 FREE R VALUE : 0.190
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040
REMARK 3 FREE R VALUE TEST SET COUNT : 6661
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 1.4800 - 1.4400 0.00 8915 460 0.2430 0.2700
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : NULL
REMARK 3 SOLVENT RADIUS : NULL
REMARK 3 SHRINKAGE RADIUS : NULL
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 17.26
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.56
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 4.18500
REMARK 3 B22 (A**2) : -2.31700
REMARK 3 B33 (A**2) : -1.86800
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : -4.20600
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.010 5921
REMARK 3 ANGLE : 0.740 8132
REMARK 3 CHIRALITY : NULL NULL
REMARK 3 PLANARITY : NULL 891
REMARK 3 DIHEDRAL : NULL 2067
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 2
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: { A|* }
REMARK 3 ORIGIN FOR THE GROUP (A): -4.2030 6.9220 101.8008
REMARK 3 T TENSOR
REMARK 3 T11: -0.0576 T22: -0.0686
REMARK 3 T33: 0.0161 T12: 0.0000
REMARK 3 T13: 0.0213 T23: 0.0013
REMARK 3 L TENSOR
REMARK 3 L11: 1.2239 L22: 0.5631
REMARK 3 L33: 0.3895 L12: -0.5049
REMARK 3 L13: -0.0659 L23: 0.1948
REMARK 3 S TENSOR
REMARK 3 S11: 0.0615 S12: 0.0117 S13: 0.2631
REMARK 3 S21: -0.0427 S22: -0.0029 S23: -0.1316
REMARK 3 S31: -0.0528 S32: 0.0305 S33: -0.0586
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: { B|* }
REMARK 3 ORIGIN FOR THE GROUP (A): -17.9581 3.0935 70.3671
REMARK 3 T TENSOR
REMARK 3 T11: -0.1730 T22: -0.0635
REMARK 3 T33: -0.1299 T12: 0.0750
REMARK 3 T13: 0.0835 T23: 0.0213
REMARK 3 L TENSOR
REMARK 3 L11: 3.7366 L22: 1.3319
REMARK 3 L33: 1.9985 L12: -1.4581
REMARK 3 L13: -2.2654 L23: 0.6920
REMARK 3 S TENSOR
REMARK 3 S11: 0.1974 S12: 0.5194 S13: -0.1841
REMARK 3 S21: -0.2853 S22: -0.4056 S23: -0.1290
REMARK 3 S31: -0.0498 S32: -0.1605 S33: 0.2081
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED
REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION.
REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO
REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET
REMARK 3 INCORPORATION. 2. MAGNESIUM (MG), CHLORIDE (CL), ETHYLENE GLYCOL
REMARK 3 (EDO) MODELED ARE PRESENT CRYSTALLIZATION/PURIFICATION/CRYO
REMARK 3 BUFFERS. 3. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B
REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U
REMARK 3 FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT.
REMARK 3 5. RAMACHANDRAN OUTLIER IS LOCATION IN A REGION WITH POOR
REMARK 3 DENSITY.
REMARK 4
REMARK 4 3N8U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUN-10.
REMARK 100 THE DEPOSITION ID IS D_1000059525.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 07-APR-10
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.7
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : SSRL
REMARK 200 BEAMLINE : BL11-1
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837,0.97947,0.97901
REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT
REMARK 200 MONOCHROMATOR (HORIZONTAL
REMARK 200 FOCUSING)
REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING)
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : XSCALE
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 132203
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.440
REMARK 200 RESOLUTION RANGE LOW (A) : 29.738
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 94.5
REMARK 200 DATA REDUNDANCY : NULL
REMARK 200 R MERGE (I) : 0.04600
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.1000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.44
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.49
REMARK 200 COMPLETENESS FOR SHELL (%) : 88.1
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : 0.92000
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.200
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: MAD
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD
REMARK 200 SOFTWARE USED: SHELX, SHELXD, AUTOSHARP
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: DATA WERE SCALED USING XSCALE WITH FRIEDEL PAIRS KEPT AS
REMARK 200 SEPARATE WHEN COMPUTING R-SYM, COMPLETENESS AND <I/SIGMA(I)>
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 47.33
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.20M MGACETATE, 20.00% PEG-3350, NO
REMARK 280 BUFFER PH 7.7, NANODROP, VAPOR DIFFUSION, SITTING DROP,
REMARK 280 TEMPERATURE 277K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y,-Z
REMARK 290 3555 X+1/2,Y+1/2,Z
REMARK 290 4555 -X+1/2,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 65.73500
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.96500
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 65.73500
REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.96500
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 300 REMARK: CRYSTAL PACKING SUGGESTS THE ASSIGNMENT OF A MONOMER AS THE
REMARK 300 SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 GLY A 0
REMARK 465 SER A 25
REMARK 465 ASP A 26
REMARK 465 ASP A 27
REMARK 465 ASP A 28
REMARK 465 ASN A 29
REMARK 465 PRO A 30
REMARK 465 THR A 31
REMARK 465 VAL A 32
REMARK 465 GLY B 0
REMARK 465 SER B 25
REMARK 465 ASP B 26
REMARK 465 ASP B 27
REMARK 465 ASP B 28
REMARK 465 ASN B 29
REMARK 465 PRO B 30
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 ASP A 33 CG OD1 OD2
REMARK 470 SER A 89 OG
REMARK 470 GLU A 351 CD OE1 OE2
REMARK 470 SER B 289 OG
REMARK 470 GLU B 351 CG CD OE1 OE2
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 SER A 71 -56.47 -122.98
REMARK 500 HIS A 86 62.46 36.46
REMARK 500 ASN A 170 52.13 -106.77
REMARK 500 ASN A 180 85.03 -159.76
REMARK 500 ASN A 230 -73.92 -97.54
REMARK 500 VAL A 260 -67.03 -106.60
REMARK 500 ASP A 326 35.09 -142.09
REMARK 500 HIS B 86 55.72 36.28
REMARK 500 HIS B 86 62.15 36.28
REMARK 500 ASN B 170 66.23 -109.48
REMARK 500 ASN B 180 84.52 -150.93
REMARK 500 ASN B 230 -75.66 -98.65
REMARK 500 VAL B 260 -66.42 -106.31
REMARK 500 ASP B 326 35.21 -141.92
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG A 1 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HOH A 527 O
REMARK 620 2 HOH A 543 O 90.9
REMARK 620 3 HOH A 572 O 87.4 90.9
REMARK 620 4 HOH A 578 O 91.3 177.7 89.8
REMARK 620 5 HOH A 620 O 89.9 87.5 176.8 91.9
REMARK 620 6 HOH A 662 O 178.4 89.4 94.2 88.3 88.5
REMARK 620 N 1 2 3 4 5
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG A 2 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HOH A 570 O
REMARK 620 2 HOH A 876 O 86.6
REMARK 620 3 HOH A1179 O 76.2 93.7
REMARK 620 4 HOH B 416 O 176.9 96.4 103.1
REMARK 620 5 HOH B 526 O 102.3 83.5 176.9 78.6
REMARK 620 6 HOH B 536 O 92.4 165.5 100.1 84.7 82.6
REMARK 620 N 1 2 3 4 5
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG B 3 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HOH B 426 O
REMARK 620 2 HOH B 466 O 88.4
REMARK 620 3 HOH B 483 O 91.4 91.6
REMARK 620 4 HOH B 495 O 178.4 90.1 89.3
REMARK 620 5 HOH B 516 O 90.1 175.8 92.4 91.3
REMARK 620 6 HOH B 556 O 92.4 85.8 175.4 86.9 90.2
REMARK 620 N 1 2 3 4 5
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 2
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 5
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 7
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 12
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 3
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 4
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 6
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC9
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 8
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 9
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 10
REMARK 800
REMARK 800 SITE_IDENTIFIER: BC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 11
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 416712 RELATED DB: TARGETDB
REMARK 999
REMARK 999 SEQUENCE
REMARK 999 THE CONSTRUCT (RESIDUES 25-384) WAS EXPRESSED WITH A PURIFICATION
REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE
REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE.
DBREF 3N8U A 25 384 UNP A7M120 A7M120_BACOV 25 384
DBREF 3N8U B 25 384 UNP A7M120 A7M120_BACOV 25 384
SEQADV 3N8U GLY A 0 UNP A7M120 EXPRESSION TAG
SEQADV 3N8U GLY B 0 UNP A7M120 EXPRESSION TAG
SEQRES 1 A 361 GLY SER ASP ASP ASP ASN PRO THR VAL ASP PRO ALA ASN
SEQRES 2 A 361 ILE ASP TYR THR PRO GLU ASN ALA SER SER TRP HIS ASN
SEQRES 3 A 361 TYR MSE ARG ASN VAL ALA ALA LEU LEU LYS THR ASP ALA
SEQRES 4 A 361 THR ASN LEU TYR ASN ALA TRP ASN SER SER TYR LYS GLY
SEQRES 5 A 361 GLY GLU SER TYR ALA SER LEU PHE LYS ALA HIS SER GLY
SEQRES 6 A 361 SER PRO TYR ALA SER ALA LEU SER CYS VAL GLU GLU ILE
SEQRES 7 A 361 VAL ASP LYS CYS ALA GLU ILE ALA ASN GLU VAL GLY THR
SEQRES 8 A 361 ALA LYS ILE GLY ASP PRO TYR ASN LEU TYR LYS ALA GLY
SEQRES 9 A 361 ASN THR GLU GLU ALA LEU TYR ALA VAL GLU SER TRP TYR
SEQRES 10 A 361 SER TRP HIS SER ARG ASP ASP TYR THR ASN ASN ILE TYR
SEQRES 11 A 361 SER ILE ARG ASN ALA TYR TYR GLY SER LEU ASP GLY ASN
SEQRES 12 A 361 ILE ASN ALA ASN SER LEU SER THR VAL ILE ALA GLY ALA
SEQRES 13 A 361 ASN SER SER LEU ASP THR LYS ILE LYS ASN ALA ILE GLN
SEQRES 14 A 361 LYS ALA ALA LYS ALA ILE GLN ASP ILE PRO GLN PRO PHE
SEQRES 15 A 361 ARG ASN HIS ILE PRO SER ASN GLU THR VAL ALA ALA MSE
SEQRES 16 A 361 ASP ALA CYS ALA GLU LEU GLU SER ILE LEU LYS ASN ASP
SEQRES 17 A 361 LEU LYS SER TYR ILE ALA ASN ASN SER ASN ASN ILE ASN
SEQRES 18 A 361 THR ASP ALA VAL LEU ASN PRO VAL VAL THR GLN TYR VAL
SEQRES 19 A 361 ASP ALA VAL VAL VAL PRO THR TYR LYS SER LEU LYS GLU
SEQRES 20 A 361 LYS ASN ASP ALA LEU TYR ASN ALA VAL ILE VAL LEU ALA
SEQRES 21 A 361 ASP ASN PRO SER ASN SER ALA PHE GLU THR ALA CYS ASP
SEQRES 22 A 361 ALA TRP ILE THR ALA ARG GLU PRO TRP GLU LYS SER GLU
SEQRES 23 A 361 ALA PHE LEU PHE GLY PRO VAL ASP GLU MSE GLY LEU ASP
SEQRES 24 A 361 PRO ASN MSE ASP SER TRP PRO LEU ASP GLN ASN ALA ILE
SEQRES 25 A 361 VAL GLN ILE LEU ASN SER GLN SER TRP SER ASP LEU GLU
SEQRES 26 A 361 TRP SER GLU GLY ASP ASP GLU ALA ALA VAL GLU SER ALA
SEQRES 27 A 361 GLN ASN VAL ARG GLY PHE HIS THR LEU GLU PHE LEU LEU
SEQRES 28 A 361 TYR LYS ASN GLY GLU PRO ARG LYS VAL GLN
SEQRES 1 B 361 GLY SER ASP ASP ASP ASN PRO THR VAL ASP PRO ALA ASN
SEQRES 2 B 361 ILE ASP TYR THR PRO GLU ASN ALA SER SER TRP HIS ASN
SEQRES 3 B 361 TYR MSE ARG ASN VAL ALA ALA LEU LEU LYS THR ASP ALA
SEQRES 4 B 361 THR ASN LEU TYR ASN ALA TRP ASN SER SER TYR LYS GLY
SEQRES 5 B 361 GLY GLU SER TYR ALA SER LEU PHE LYS ALA HIS SER GLY
SEQRES 6 B 361 SER PRO TYR ALA SER ALA LEU SER CYS VAL GLU GLU ILE
SEQRES 7 B 361 VAL ASP LYS CYS ALA GLU ILE ALA ASN GLU VAL GLY THR
SEQRES 8 B 361 ALA LYS ILE GLY ASP PRO TYR ASN LEU TYR LYS ALA GLY
SEQRES 9 B 361 ASN THR GLU GLU ALA LEU TYR ALA VAL GLU SER TRP TYR
SEQRES 10 B 361 SER TRP HIS SER ARG ASP ASP TYR THR ASN ASN ILE TYR
SEQRES 11 B 361 SER ILE ARG ASN ALA TYR TYR GLY SER LEU ASP GLY ASN
SEQRES 12 B 361 ILE ASN ALA ASN SER LEU SER THR VAL ILE ALA GLY ALA
SEQRES 13 B 361 ASN SER SER LEU ASP THR LYS ILE LYS ASN ALA ILE GLN
SEQRES 14 B 361 LYS ALA ALA LYS ALA ILE GLN ASP ILE PRO GLN PRO PHE
SEQRES 15 B 361 ARG ASN HIS ILE PRO SER ASN GLU THR VAL ALA ALA MSE
SEQRES 16 B 361 ASP ALA CYS ALA GLU LEU GLU SER ILE LEU LYS ASN ASP
SEQRES 17 B 361 LEU LYS SER TYR ILE ALA ASN ASN SER ASN ASN ILE ASN
SEQRES 18 B 361 THR ASP ALA VAL LEU ASN PRO VAL VAL THR GLN TYR VAL
SEQRES 19 B 361 ASP ALA VAL VAL VAL PRO THR TYR LYS SER LEU LYS GLU
SEQRES 20 B 361 LYS ASN ASP ALA LEU TYR ASN ALA VAL ILE VAL LEU ALA
SEQRES 21 B 361 ASP ASN PRO SER ASN SER ALA PHE GLU THR ALA CYS ASP
SEQRES 22 B 361 ALA TRP ILE THR ALA ARG GLU PRO TRP GLU LYS SER GLU
SEQRES 23 B 361 ALA PHE LEU PHE GLY PRO VAL ASP GLU MSE GLY LEU ASP
SEQRES 24 B 361 PRO ASN MSE ASP SER TRP PRO LEU ASP GLN ASN ALA ILE
SEQRES 25 B 361 VAL GLN ILE LEU ASN SER GLN SER TRP SER ASP LEU GLU
SEQRES 26 B 361 TRP SER GLU GLY ASP ASP GLU ALA ALA VAL GLU SER ALA
SEQRES 27 B 361 GLN ASN VAL ARG GLY PHE HIS THR LEU GLU PHE LEU LEU
SEQRES 28 B 361 TYR LYS ASN GLY GLU PRO ARG LYS VAL GLN
MODRES 3N8U MSE A 51 MET SELENOMETHIONINE
MODRES 3N8U MSE A 218 MET SELENOMETHIONINE
MODRES 3N8U MSE A 319 MET SELENOMETHIONINE
MODRES 3N8U MSE A 325 MET SELENOMETHIONINE
MODRES 3N8U MSE B 51 MET SELENOMETHIONINE
MODRES 3N8U MSE B 218 MET SELENOMETHIONINE
MODRES 3N8U MSE B 319 MET SELENOMETHIONINE
MODRES 3N8U MSE B 325 MET SELENOMETHIONINE
HET MSE A 51 8
HET MSE A 218 8
HET MSE A 319 8
HET MSE A 325 8
HET MSE B 51 8
HET MSE B 218 8
HET MSE B 319 8
HET MSE B 325 8
HET MG A 1 1
HET MG A 2 1
HET CL A 5 1
HET EDO A 7 4
HET EDO A 12 7
HET MG B 3 1
HET CL B 4 1
HET EDO B 6 8
HET EDO B 8 4
HET EDO B 9 4
HET EDO B 10 4
HET EDO B 11 4
HETNAM MSE SELENOMETHIONINE
HETNAM MG MAGNESIUM ION
HETNAM CL CHLORIDE ION
HETNAM EDO 1,2-ETHANEDIOL
HETSYN EDO ETHYLENE GLYCOL
FORMUL 1 MSE 8(C5 H11 N O2 SE)
FORMUL 3 MG 3(MG 2+)
FORMUL 5 CL 2(CL 1-)
FORMUL 6 EDO 7(C2 H6 O2)
FORMUL 15 HOH *1191(H2 O)
HELIX 1 1 ASP A 33 ILE A 37 5 5
HELIX 2 2 ASN A 43 SER A 71 1 29
HELIX 3 3 SER A 78 HIS A 86 1 9
HELIX 4 4 SER A 93 ALA A 115 1 23
HELIX 5 5 ILE A 117 ALA A 126 1 10
HELIX 6 6 ASN A 128 ALA A 135 1 8
HELIX 7 7 HIS A 143 GLY A 161 1 19
HELIX 8 8 SER A 171 ASN A 180 1 10
HELIX 9 9 ASN A 180 ILE A 201 1 22
HELIX 10 10 PRO A 204 HIS A 208 5 5
HELIX 11 11 SER A 211 ASN A 230 1 20
HELIX 12 12 ASN A 230 ASN A 238 1 9
HELIX 13 13 ASN A 239 ASN A 242 5 4
HELIX 14 14 THR A 245 VAL A 260 1 16
HELIX 15 15 VAL A 260 ASN A 285 1 26
HELIX 16 16 SER A 287 LYS A 307 1 21
HELIX 17 17 SER A 308 PHE A 313 5 6
HELIX 18 18 GLY A 314 MSE A 319 1 6
HELIX 19 19 GLY A 320 SER A 327 1 8
HELIX 20 20 ASP A 331 GLN A 342 1 12
HELIX 21 21 SER A 343 GLU A 348 5 6
HELIX 22 22 ASP A 354 ASN A 363 1 10
HELIX 23 23 ARG A 365 LEU A 374 1 10
HELIX 24 24 ASP B 33 ILE B 37 5 5
HELIX 25 25 ASN B 43 SER B 71 1 29
HELIX 26 26 SER B 78 HIS B 86 1 9
HELIX 27 27 SER B 93 ALA B 115 1 23
HELIX 28 28 ILE B 117 ALA B 126 1 10
HELIX 29 29 ASN B 128 ALA B 135 1 8
HELIX 30 30 SER B 138 TRP B 142 5 5
HELIX 31 31 HIS B 143 GLY B 161 1 19
HELIX 32 32 SER B 171 ASN B 180 1 10
HELIX 33 33 ASN B 180 ASP B 200 1 21
HELIX 34 34 PRO B 204 HIS B 208 5 5
HELIX 35 35 SER B 211 ASN B 230 1 20
HELIX 36 36 ASN B 230 ASN B 238 1 9
HELIX 37 37 ASN B 239 ASN B 242 5 4
HELIX 38 38 THR B 245 VAL B 260 1 16
HELIX 39 39 VAL B 260 ASN B 285 1 26
HELIX 40 40 SER B 287 LYS B 307 1 21
HELIX 41 41 SER B 308 PHE B 313 5 6
HELIX 42 42 GLY B 314 MSE B 319 1 6
HELIX 43 43 GLY B 320 SER B 327 1 8
HELIX 44 44 ASP B 331 GLN B 342 1 12
HELIX 45 45 SER B 343 GLU B 348 5 6
HELIX 46 46 ASP B 354 ASN B 363 1 10
HELIX 47 47 ARG B 365 LEU B 374 1 10
SHEET 1 A 2 TYR A 375 LYS A 376 0
SHEET 2 A 2 GLU A 379 PRO A 380 -1 O GLU A 379 N LYS A 376
SHEET 1 B 2 TYR B 375 LYS B 376 0
SHEET 2 B 2 GLU B 379 PRO B 380 -1 O GLU B 379 N LYS B 376
LINK C TYR A 50 N MSE A 51 1555 1555 1.35
LINK C MSE A 51 N ARG A 52 1555 1555 1.36
LINK C ALA A 217 N MSE A 218 1555 1555 1.35
LINK C MSE A 218 N ASP A 219 1555 1555 1.35
LINK C GLU A 318 N MSE A 319 1555 1555 1.35
LINK C MSE A 319 N GLY A 320 1555 1555 1.33
LINK C ASN A 324 N MSE A 325 1555 1555 1.35
LINK C MSE A 325 N ASP A 326 1555 1555 1.33
LINK C TYR B 50 N MSE B 51 1555 1555 1.36
LINK C MSE B 51 N ARG B 52 1555 1555 1.36
LINK C ALA B 217 N MSE B 218 1555 1555 1.36
LINK C MSE B 218 N ASP B 219 1555 1555 1.36
LINK C GLU B 318 N MSE B 319 1555 1555 1.34
LINK C MSE B 319 N GLY B 320 1555 1555 1.35
LINK C ASN B 324 N MSE B 325 1555 1555 1.34
LINK C MSE B 325 N ASP B 326 1555 1555 1.34
LINK MG MG A 1 O HOH A 527 1555 1555 2.06
LINK MG MG A 1 O HOH A 543 1555 1555 2.12
LINK MG MG A 1 O HOH A 572 1555 1555 2.02
LINK MG MG A 1 O HOH A 578 1555 1555 2.12
LINK MG MG A 1 O HOH A 620 1555 1555 2.07
LINK MG MG A 1 O HOH A 662 1555 1555 2.13
LINK MG MG A 2 O HOH A 570 1555 1555 2.31
LINK MG MG A 2 O HOH A 876 1555 1555 1.99
LINK MG MG A 2 O AHOH A1179 1555 1555 1.94
LINK MG MG A 2 O HOH B 416 1555 1555 2.69
LINK MG MG A 2 O HOH B 526 1555 1555 2.34
LINK MG MG A 2 O HOH B 536 1555 1555 1.95
LINK MG MG B 3 O HOH B 426 1555 1555 2.06
LINK MG MG B 3 O HOH B 466 1555 1555 2.10
LINK MG MG B 3 O HOH B 483 1555 1555 1.94
LINK MG MG B 3 O HOH B 495 1555 1555 2.05
LINK MG MG B 3 O HOH B 516 1555 1555 2.06
LINK MG MG B 3 O HOH B 556 1555 1555 1.93
CISPEP 1 SER A 89 PRO A 90 0 -8.62
CISPEP 2 GLN A 203 PRO A 204 0 -7.54
CISPEP 3 TRP A 328 PRO A 329 0 -3.89
CISPEP 4 SER B 89 PRO B 90 0 4.52
CISPEP 5 SER B 89 PRO B 90 0 7.05
CISPEP 6 GLN B 203 PRO B 204 0 -1.74
CISPEP 7 TRP B 328 PRO B 329 0 -4.67
SITE 1 AC1 7 GLU A 111 HOH A 527 HOH A 543 HOH A 572
SITE 2 AC1 7 HOH A 578 HOH A 620 HOH A 662
SITE 1 AC2 6 HOH A 570 HOH A 876 HOH A1179 HOH B 416
SITE 2 AC2 6 HOH B 526 HOH B 536
SITE 1 AC3 5 TRP A 142 SER A 144 PRO A 204 ARG A 206
SITE 2 AC3 5 HOH A 524
SITE 1 AC4 4 PRO A 329 LEU A 330 ASP A 331 ASN A 363
SITE 1 AC5 11 ASN A 110 THR A 114 GLY A 118 ASP A 119
SITE 2 AC5 11 ASN A 122 GLU A 225 LYS A 229 HOH A 656
SITE 3 AC5 11 HOH A 665 HOH A 759 HOH A 828
SITE 1 AC6 6 HOH B 426 HOH B 466 HOH B 483 HOH B 495
SITE 2 AC6 6 HOH B 516 HOH B 556
SITE 1 AC7 3 TRP B 142 SER B 144 ARG B 206
SITE 1 AC8 5 LYS B 104 GLU B 107 ASP B 317 HOH B 851
SITE 2 AC8 5 HOH B1104
SITE 1 AC9 6 SER B 72 GLY B 75 GLY B 76 HOH B 661
SITE 2 AC9 6 HOH B 676 HOH B 722
SITE 1 BC1 4 THR B 264 GLU B 303 LYS B 307 HOH B 544
SITE 1 BC2 2 ASN B 150 GLN B 199
SITE 1 BC3 3 GLN B 203 PRO B 204 ASN B 207
CRYST1 131.470 49.930 128.320 90.00 117.58 90.00 C 1 2 1 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.007606 0.000000 0.003973 0.00000
SCALE2 0.000000 0.020028 0.000000 0.00000
SCALE3 0.000000 0.000000 0.008792 0.00000