HEADER LIGASE 02-JUN-10 3NAW TITLE CRYSTAL STRUCTURE OF E. COLI O157:H7 EFFECTOR PROTEIN NLEL COMPND MOL_ID: 1; COMPND 2 MOLECULE: SECRETED EFFECTOR PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 176-782; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83334; SOURCE 4 STRAIN: O157:H7; SOURCE 5 GENE: ECS1560; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG20 KEYWDS EFFECTOR PROTEIN, PENTAPEPTIDE, HECT DOMAIN, HECT E3 UBIQUITIN KEYWDS 2 LIGASE, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR D.Y.LIN,J.CHEN REVDAT 2 19-JAN-11 3NAW 1 JRNL REVDAT 1 27-OCT-10 3NAW 0 JRNL AUTH D.Y.LIN,J.DIAO,D.ZHOU,J.CHEN JRNL TITL BIOCHEMICAL AND STRUCTURAL STUDIES OF A HECT-LIKE UBIQUITIN JRNL TITL 2 LIGASE FROM ESCHERICHIA COLI O157:H7. JRNL REF J.BIOL.CHEM. V. 286 441 2011 JRNL REFN ISSN 0021-9258 JRNL PMID 20980253 JRNL DOI 10.1074/JBC.M110.167643 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.5_2) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.05 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.200 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 49261 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 2528 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.0550 - 6.5463 0.99 2745 158 0.1796 0.1994 REMARK 3 2 6.5463 - 5.1981 0.99 2696 130 0.1829 0.2444 REMARK 3 3 5.1981 - 4.5417 0.99 2678 147 0.1438 0.2010 REMARK 3 4 4.5417 - 4.1267 0.99 2669 150 0.1329 0.1940 REMARK 3 5 4.1267 - 3.8311 0.99 2645 140 0.1446 0.2131 REMARK 3 6 3.8311 - 3.6053 0.98 2679 136 0.1583 0.2054 REMARK 3 7 3.6053 - 3.4248 0.98 2639 134 0.1782 0.2731 REMARK 3 8 3.4248 - 3.2757 0.98 2650 147 0.1908 0.2572 REMARK 3 9 3.2757 - 3.1497 0.98 2626 152 0.2036 0.2632 REMARK 3 10 3.1497 - 3.0410 0.97 2583 147 0.2151 0.2912 REMARK 3 11 3.0410 - 2.9459 0.97 2577 141 0.2052 0.3261 REMARK 3 12 2.9459 - 2.8617 0.96 2575 148 0.2023 0.2631 REMARK 3 13 2.8617 - 2.7864 0.96 2561 136 0.2006 0.2778 REMARK 3 14 2.7864 - 2.7184 0.95 2572 144 0.2137 0.2812 REMARK 3 15 2.7184 - 2.6566 0.94 2511 135 0.2104 0.2949 REMARK 3 16 2.6566 - 2.6001 0.94 2457 129 0.2096 0.2890 REMARK 3 17 2.6001 - 2.5481 0.93 2521 128 0.2167 0.3057 REMARK 3 18 2.5481 - 2.5000 0.87 2349 126 0.2272 0.3451 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.33 REMARK 3 B_SOL : 45.98 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.270 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 15.12590 REMARK 3 B22 (A**2) : -6.01850 REMARK 3 B33 (A**2) : -9.10750 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -7.91900 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 9940 REMARK 3 ANGLE : 1.078 13446 REMARK 3 CHIRALITY : 0.075 1449 REMARK 3 PLANARITY : 0.004 1736 REMARK 3 DIHEDRAL : 19.567 3550 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 114.8966 32.3124 30.7755 REMARK 3 T TENSOR REMARK 3 T11: 0.1142 T22: 0.1445 REMARK 3 T33: 0.1402 T12: 0.0390 REMARK 3 T13: -0.0249 T23: 0.0049 REMARK 3 L TENSOR REMARK 3 L11: 0.2820 L22: 0.5172 REMARK 3 L33: 0.6732 L12: -0.0203 REMARK 3 L13: 0.0478 L23: 0.1407 REMARK 3 S TENSOR REMARK 3 S11: -0.1124 S12: -0.0296 S13: 0.0578 REMARK 3 S21: -0.0443 S22: -0.0131 S23: 0.0970 REMARK 3 S31: -0.0458 S32: -0.1479 S33: 0.1160 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3NAW COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JUN-10. REMARK 100 THE RCSB ID CODE IS RCSB059599. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0115, 0.9794, 0.9796, 0.9494 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50366 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11800 REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.58100 REMARK 200 FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES, 1.6M LISO4 OR MGSO4, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 156.83600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.65500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 156.83600 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 38.65500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 51120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -106.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 170 REMARK 465 GLN A 171 REMARK 465 GLY A 172 REMARK 465 ARG A 173 REMARK 465 ALA A 174 REMARK 465 CYS A 175 REMARK 465 SER B 170 REMARK 465 GLN B 171 REMARK 465 GLY B 172 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 176 CG CD1 CD2 REMARK 470 GLU A 199 CG CD OE1 OE2 REMARK 470 ARG B 173 CG CD NE CZ NH1 NH2 REMARK 470 CYS B 175 SG REMARK 470 GLU B 180 CG CD OE1 OE2 REMARK 470 THR B 193 OG1 CG2 REMARK 470 GLU B 195 CG CD OE1 OE2 REMARK 470 GLU B 196 CG CD OE1 OE2 REMARK 470 ASN B 748 CG OD1 REMARK 470 ASN B 749 CG OD1 REMARK 470 VAL B 750 CG1 CG2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 HIS B 672 CG NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 429 CB CYS A 429 SG -0.127 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 224 124.87 -39.85 REMARK 500 ARG A 234 129.75 -31.28 REMARK 500 ASN A 254 130.72 -32.03 REMARK 500 ASN A 274 15.57 56.65 REMARK 500 GLN A 294 -50.14 -130.39 REMARK 500 ASN A 300 108.57 -59.19 REMARK 500 SER A 316 108.04 -51.64 REMARK 500 ASP A 345 54.02 -105.63 REMARK 500 GLU A 348 48.76 32.47 REMARK 500 SER A 411 35.08 -95.85 REMARK 500 TYR A 470 57.71 -116.77 REMARK 500 TYR A 532 72.27 -67.88 REMARK 500 MET A 701 -114.24 -117.22 REMARK 500 ASP A 727 100.87 -163.06 REMARK 500 PHE A 769 63.89 -150.61 REMARK 500 GLU B 196 76.34 51.25 REMARK 500 ASN B 202 58.14 -97.15 REMARK 500 CYS B 206 171.91 -57.18 REMARK 500 SER B 209 157.64 -49.89 REMARK 500 LEU B 218 34.28 -77.94 REMARK 500 SER B 224 115.20 -36.95 REMARK 500 ARG B 234 142.08 -39.05 REMARK 500 GLU B 244 130.14 -39.30 REMARK 500 SER B 251 -155.61 -76.40 REMARK 500 LYS B 288 119.51 -30.79 REMARK 500 GLN B 294 -55.30 -128.97 REMARK 500 ASN B 332 44.95 -76.36 REMARK 500 GLU B 348 27.84 48.82 REMARK 500 MET B 487 14.80 -147.03 REMARK 500 GLN B 509 46.72 -97.80 REMARK 500 ASP B 525 49.69 -91.90 REMARK 500 ASP B 529 27.35 82.08 REMARK 500 ASP B 541 97.79 -61.87 REMARK 500 ASP B 542 11.68 -155.46 REMARK 500 SER B 671 154.96 -40.86 REMARK 500 MET B 701 -91.98 -105.85 REMARK 500 ASP B 707 118.93 -165.87 REMARK 500 ASP B 727 107.18 -164.61 REMARK 500 ASN B 749 -166.04 -167.38 REMARK 500 CYS B 753 81.14 59.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 783 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 784 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 8 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 8 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 10 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 783 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 9 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MES B 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3NB2 RELATED DB: PDB DBREF 3NAW A 170 782 UNP Q8X5G6 Q8X5G6_ECO57 170 782 DBREF 3NAW B 170 782 UNP Q8X5G6 Q8X5G6_ECO57 170 782 SEQRES 1 A 613 SER GLN GLY ARG ALA CYS LEU SER LYS ALA GLU LEU THR SEQRES 2 A 613 ALA ASP LEU ILE TRP LEU SER ALA ASN ARG THR GLY GLU SEQRES 3 A 613 GLU SER ALA GLU GLU LEU ASN TYR SER GLY CYS ASP LEU SEQRES 4 A 613 SER GLY LEU SER LEU VAL GLY LEU ASN LEU SER SER VAL SEQRES 5 A 613 ASN PHE SER GLY ALA VAL LEU ASP ASP THR ASP LEU ARG SEQRES 6 A 613 MET SER ASP LEU SER GLN ALA VAL LEU GLU ASN CYS SER SEQRES 7 A 613 PHE LYS ASN SER ILE LEU ASN GLU CYS ASN PHE CYS TYR SEQRES 8 A 613 ALA ASN LEU SER ASN CYS ILE ILE ARG ALA LEU PHE GLU SEQRES 9 A 613 ASN SER ASN PHE SER ASN SER ASN LEU LYS ASN ALA SER SEQRES 10 A 613 PHE LYS GLY SER SER TYR ILE GLN TYR PRO PRO ILE LEU SEQRES 11 A 613 ASN GLU ALA ASP LEU THR GLY ALA ILE ILE ILE PRO GLY SEQRES 12 A 613 MET VAL LEU SER GLY ALA ILE LEU GLY ASP VAL LYS GLU SEQRES 13 A 613 LEU PHE SER GLU LYS SER ASN THR ILE ASN LEU GLY GLY SEQRES 14 A 613 CYS TYR ILE ASP LEU SER ASP ILE GLN GLU ASN ILE LEU SEQRES 15 A 613 SER VAL LEU ASP ASN TYR THR LYS SER ASN LYS SER ILE SEQRES 16 A 613 LEU LEU THR MET ASN THR SER ASP ASP LYS TYR ASN HIS SEQRES 17 A 613 ASP LYS VAL ARG ALA ALA GLU GLU LEU ILE LYS LYS ILE SEQRES 18 A 613 SER LEU ASP GLU LEU ALA ALA PHE ARG PRO TYR VAL LYS SEQRES 19 A 613 MET SER LEU ALA ASP SER PHE SER ILE HIS PRO TYR LEU SEQRES 20 A 613 ASN ASN ALA ASN ILE GLN GLN TRP LEU GLU PRO ILE CYS SEQRES 21 A 613 ASP ASP PHE PHE ASP THR ILE MET SER TRP PHE ASN ASN SEQRES 22 A 613 SER ILE MET MET TYR MET GLU ASN GLY SER LEU LEU GLN SEQRES 23 A 613 ALA GLY MET TYR PHE GLU ARG HIS PRO GLY ALA MET VAL SEQRES 24 A 613 SER TYR ASN SER SER PHE ILE GLN ILE VAL MET ASN GLY SEQRES 25 A 613 SER ARG ARG ASP GLY MET GLN GLU ARG PHE ARG GLU LEU SEQRES 26 A 613 TYR GLU VAL TYR LEU LYS ASN GLU LYS VAL TYR PRO VAL SEQRES 27 A 613 THR GLN GLN SER ASP PHE GLY LEU CYS ASP GLY SER GLY SEQRES 28 A 613 LYS PRO ASP TRP ASP ASP ASP SER ASP LEU ALA TYR ASN SEQRES 29 A 613 TRP VAL LEU LEU SER SER GLN ASP ASP GLY MET ALA MET SEQRES 30 A 613 MET CYS SER LEU SER HIS MET VAL ASP MET LEU SER PRO SEQRES 31 A 613 ASN THR SER THR ASN TRP MET SER PHE PHE LEU TYR LYS SEQRES 32 A 613 ASP GLY GLU VAL GLN ASN THR PHE GLY TYR SER LEU SER SEQRES 33 A 613 ASN LEU PHE SER GLU SER PHE PRO ILE PHE SER ILE PRO SEQRES 34 A 613 TYR HIS LYS ALA PHE SER GLN ASN PHE VAL SER GLY ILE SEQRES 35 A 613 LEU ASP ILE LEU ILE SER ASP ASN GLU LEU LYS GLU ARG SEQRES 36 A 613 PHE ILE GLU ALA LEU ASN SER ASN LYS SER ASP TYR LYS SEQRES 37 A 613 MET ILE ALA ASP ASP GLN GLN ARG LYS LEU ALA CYS VAL SEQRES 38 A 613 TRP ASN PRO PHE LEU ASP GLY TRP GLU LEU ASN ALA GLN SEQRES 39 A 613 HIS VAL ASP MET ILE MET GLY SER HIS VAL LEU LYS ASP SEQRES 40 A 613 MET PRO LEU ARG LYS GLN ALA GLU ILE LEU PHE CYS LEU SEQRES 41 A 613 GLY GLY VAL PHE CYS LYS TYR SER SER SER ASP MET PHE SEQRES 42 A 613 GLY THR GLU TYR ASP SER PRO GLU ILE LEU ARG ARG TYR SEQRES 43 A 613 ALA ASN GLY LEU ILE GLU GLN ALA TYR LYS THR ASP PRO SEQRES 44 A 613 GLN VAL PHE GLY SER VAL TYR TYR TYR ASN ASP ILE LEU SEQRES 45 A 613 ASP ARG LEU GLN GLY ARG ASN ASN VAL PHE THR CYS THR SEQRES 46 A 613 ALA VAL LEU THR ASP MET LEU THR GLU HIS ALA LYS GLU SEQRES 47 A 613 SER PHE PRO GLU ILE PHE SER LEU TYR TYR PRO VAL ALA SEQRES 48 A 613 TRP ARG SEQRES 1 B 613 SER GLN GLY ARG ALA CYS LEU SER LYS ALA GLU LEU THR SEQRES 2 B 613 ALA ASP LEU ILE TRP LEU SER ALA ASN ARG THR GLY GLU SEQRES 3 B 613 GLU SER ALA GLU GLU LEU ASN TYR SER GLY CYS ASP LEU SEQRES 4 B 613 SER GLY LEU SER LEU VAL GLY LEU ASN LEU SER SER VAL SEQRES 5 B 613 ASN PHE SER GLY ALA VAL LEU ASP ASP THR ASP LEU ARG SEQRES 6 B 613 MET SER ASP LEU SER GLN ALA VAL LEU GLU ASN CYS SER SEQRES 7 B 613 PHE LYS ASN SER ILE LEU ASN GLU CYS ASN PHE CYS TYR SEQRES 8 B 613 ALA ASN LEU SER ASN CYS ILE ILE ARG ALA LEU PHE GLU SEQRES 9 B 613 ASN SER ASN PHE SER ASN SER ASN LEU LYS ASN ALA SER SEQRES 10 B 613 PHE LYS GLY SER SER TYR ILE GLN TYR PRO PRO ILE LEU SEQRES 11 B 613 ASN GLU ALA ASP LEU THR GLY ALA ILE ILE ILE PRO GLY SEQRES 12 B 613 MET VAL LEU SER GLY ALA ILE LEU GLY ASP VAL LYS GLU SEQRES 13 B 613 LEU PHE SER GLU LYS SER ASN THR ILE ASN LEU GLY GLY SEQRES 14 B 613 CYS TYR ILE ASP LEU SER ASP ILE GLN GLU ASN ILE LEU SEQRES 15 B 613 SER VAL LEU ASP ASN TYR THR LYS SER ASN LYS SER ILE SEQRES 16 B 613 LEU LEU THR MET ASN THR SER ASP ASP LYS TYR ASN HIS SEQRES 17 B 613 ASP LYS VAL ARG ALA ALA GLU GLU LEU ILE LYS LYS ILE SEQRES 18 B 613 SER LEU ASP GLU LEU ALA ALA PHE ARG PRO TYR VAL LYS SEQRES 19 B 613 MET SER LEU ALA ASP SER PHE SER ILE HIS PRO TYR LEU SEQRES 20 B 613 ASN ASN ALA ASN ILE GLN GLN TRP LEU GLU PRO ILE CYS SEQRES 21 B 613 ASP ASP PHE PHE ASP THR ILE MET SER TRP PHE ASN ASN SEQRES 22 B 613 SER ILE MET MET TYR MET GLU ASN GLY SER LEU LEU GLN SEQRES 23 B 613 ALA GLY MET TYR PHE GLU ARG HIS PRO GLY ALA MET VAL SEQRES 24 B 613 SER TYR ASN SER SER PHE ILE GLN ILE VAL MET ASN GLY SEQRES 25 B 613 SER ARG ARG ASP GLY MET GLN GLU ARG PHE ARG GLU LEU SEQRES 26 B 613 TYR GLU VAL TYR LEU LYS ASN GLU LYS VAL TYR PRO VAL SEQRES 27 B 613 THR GLN GLN SER ASP PHE GLY LEU CYS ASP GLY SER GLY SEQRES 28 B 613 LYS PRO ASP TRP ASP ASP ASP SER ASP LEU ALA TYR ASN SEQRES 29 B 613 TRP VAL LEU LEU SER SER GLN ASP ASP GLY MET ALA MET SEQRES 30 B 613 MET CYS SER LEU SER HIS MET VAL ASP MET LEU SER PRO SEQRES 31 B 613 ASN THR SER THR ASN TRP MET SER PHE PHE LEU TYR LYS SEQRES 32 B 613 ASP GLY GLU VAL GLN ASN THR PHE GLY TYR SER LEU SER SEQRES 33 B 613 ASN LEU PHE SER GLU SER PHE PRO ILE PHE SER ILE PRO SEQRES 34 B 613 TYR HIS LYS ALA PHE SER GLN ASN PHE VAL SER GLY ILE SEQRES 35 B 613 LEU ASP ILE LEU ILE SER ASP ASN GLU LEU LYS GLU ARG SEQRES 36 B 613 PHE ILE GLU ALA LEU ASN SER ASN LYS SER ASP TYR LYS SEQRES 37 B 613 MET ILE ALA ASP ASP GLN GLN ARG LYS LEU ALA CYS VAL SEQRES 38 B 613 TRP ASN PRO PHE LEU ASP GLY TRP GLU LEU ASN ALA GLN SEQRES 39 B 613 HIS VAL ASP MET ILE MET GLY SER HIS VAL LEU LYS ASP SEQRES 40 B 613 MET PRO LEU ARG LYS GLN ALA GLU ILE LEU PHE CYS LEU SEQRES 41 B 613 GLY GLY VAL PHE CYS LYS TYR SER SER SER ASP MET PHE SEQRES 42 B 613 GLY THR GLU TYR ASP SER PRO GLU ILE LEU ARG ARG TYR SEQRES 43 B 613 ALA ASN GLY LEU ILE GLU GLN ALA TYR LYS THR ASP PRO SEQRES 44 B 613 GLN VAL PHE GLY SER VAL TYR TYR TYR ASN ASP ILE LEU SEQRES 45 B 613 ASP ARG LEU GLN GLY ARG ASN ASN VAL PHE THR CYS THR SEQRES 46 B 613 ALA VAL LEU THR ASP MET LEU THR GLU HIS ALA LYS GLU SEQRES 47 B 613 SER PHE PRO GLU ILE PHE SER LEU TYR TYR PRO VAL ALA SEQRES 48 B 613 TRP ARG HET SO4 A 1 5 HET SO4 A 3 5 HET SO4 A 4 5 HET SO4 A 5 5 HET GOL A 783 6 HET GOL A 784 6 HET GOL A 7 6 HET GOL A 8 6 HET SO4 B 2 5 HET SO4 B 7 5 HET SO4 B 8 5 HET SO4 B 10 5 HET GOL B 783 6 HET GOL B 3 6 HET GOL B 5 6 HET GOL B 6 6 HET GOL B 9 6 HET MES B 1 12 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 SO4 8(O4 S 2-) FORMUL 7 GOL 9(C3 H8 O3) FORMUL 20 MES C6 H13 N O4 S FORMUL 21 HOH *295(H2 O) HELIX 1 1 SER A 177 ASN A 191 1 15 HELIX 2 2 SER A 197 ASN A 202 1 6 HELIX 3 3 ASN A 349 LEU A 354 5 6 HELIX 4 4 LYS A 359 LYS A 362 5 4 HELIX 5 5 SER A 363 THR A 370 1 8 HELIX 6 6 ASP A 372 LYS A 374 5 3 HELIX 7 7 TYR A 375 LYS A 389 1 15 HELIX 8 8 ARG A 399 SER A 411 1 13 HELIX 9 9 ASN A 418 ASN A 441 1 24 HELIX 10 10 GLU A 449 HIS A 463 1 15 HELIX 11 11 HIS A 463 TYR A 470 1 8 HELIX 12 12 TYR A 470 SER A 482 1 13 HELIX 13 13 MET A 487 LEU A 499 1 13 HELIX 14 14 VAL A 504 GLN A 509 1 6 HELIX 15 15 SER A 549 SER A 558 1 10 HELIX 16 16 ASN A 578 TYR A 582 5 5 HELIX 17 17 SER A 583 PHE A 592 1 10 HELIX 18 18 PHE A 595 GLN A 605 1 11 HELIX 19 19 ASN A 606 ILE A 616 1 11 HELIX 20 20 ASP A 618 LEU A 629 1 12 HELIX 21 21 ALA A 640 ASN A 652 1 13 HELIX 22 22 ASN A 661 GLY A 670 1 10 HELIX 23 23 SER A 671 MET A 677 1 7 HELIX 24 24 PRO A 678 SER A 697 1 20 HELIX 25 25 PRO A 709 ASP A 727 1 19 HELIX 26 26 PRO A 728 GLY A 732 5 5 HELIX 27 27 SER A 733 GLY A 746 1 14 HELIX 28 28 ARG A 747 VAL A 750 5 4 HELIX 29 29 CYS A 753 PHE A 769 1 17 HELIX 30 30 PHE A 769 TYR A 777 1 9 HELIX 31 31 PRO A 778 ARG A 782 5 5 HELIX 32 32 ALA B 179 ASN B 191 1 13 HELIX 33 33 ASN B 349 LEU B 354 5 6 HELIX 34 34 LYS B 359 LYS B 362 5 4 HELIX 35 35 SER B 363 THR B 370 1 8 HELIX 36 36 ASP B 372 LYS B 374 5 3 HELIX 37 37 TYR B 375 LYS B 388 1 14 HELIX 38 38 ARG B 399 SER B 411 1 13 HELIX 39 39 ASN B 418 PHE B 440 1 23 HELIX 40 40 GLU B 449 HIS B 463 1 15 HELIX 41 41 GLY B 465 TYR B 470 1 6 HELIX 42 42 TYR B 470 SER B 482 1 13 HELIX 43 43 MET B 487 LYS B 500 1 14 HELIX 44 44 VAL B 504 GLN B 509 1 6 HELIX 45 45 SER B 549 SER B 558 1 10 HELIX 46 46 SER B 583 SER B 591 1 9 HELIX 47 47 PHE B 595 PHE B 603 1 9 HELIX 48 48 ASN B 606 ILE B 616 1 11 HELIX 49 49 ASP B 618 LEU B 629 1 12 HELIX 50 50 ALA B 640 ASN B 652 1 13 HELIX 51 51 ASN B 661 GLY B 670 1 10 HELIX 52 52 PRO B 678 SER B 697 1 20 HELIX 53 53 PRO B 709 ASP B 727 1 19 HELIX 54 54 PRO B 728 GLY B 732 5 5 HELIX 55 55 SER B 733 GLY B 746 1 14 HELIX 56 56 CYS B 753 PHE B 769 1 17 HELIX 57 57 PHE B 769 TYR B 777 1 9 HELIX 58 58 PRO B 778 ARG B 782 5 5 SHEET 1 A 2 SER A 247 ILE A 252 0 SHEET 2 A 2 ILE A 267 LEU A 271 1 O ILE A 267 N PHE A 248 SHEET 1 B 3 ILE A 308 ILE A 309 0 SHEET 2 B 3 CYS A 339 ASP A 342 1 O ASP A 342 N ILE A 309 SHEET 3 B 3 THR A 333 LEU A 336 -1 N ILE A 334 O ILE A 341 SHEET 1 C 4 TRP A 534 LEU A 537 0 SHEET 2 C 4 MET A 544 CYS A 548 -1 O MET A 546 N LEU A 536 SHEET 3 C 4 PHE A 569 LYS A 572 -1 O TYR A 571 N ALA A 545 SHEET 4 C 4 GLU A 575 GLN A 577 -1 O GLN A 577 N LEU A 570 SHEET 1 D 2 LEU A 655 ASP A 656 0 SHEET 2 D 2 GLU A 659 LEU A 660 -1 O GLU A 659 N ASP A 656 SHEET 1 E 2 SER B 247 ILE B 252 0 SHEET 2 E 2 ILE B 267 LEU B 271 1 O ILE B 267 N PHE B 248 SHEET 1 F 3 ILE B 308 ILE B 309 0 SHEET 2 F 3 CYS B 339 ASP B 342 1 O ASP B 342 N ILE B 309 SHEET 3 F 3 THR B 333 LEU B 336 -1 N ILE B 334 O ILE B 341 SHEET 1 G 4 TRP B 534 LEU B 537 0 SHEET 2 G 4 MET B 544 CYS B 548 -1 O MET B 546 N LEU B 536 SHEET 3 G 4 PHE B 569 LYS B 572 -1 O PHE B 569 N MET B 547 SHEET 4 G 4 GLU B 575 VAL B 576 -1 O GLU B 575 N LYS B 572 SHEET 1 H 2 LEU B 655 ASP B 656 0 SHEET 2 H 2 GLU B 659 LEU B 660 -1 O GLU B 659 N ASP B 656 SSBOND 1 CYS B 649 CYS B 649 1555 2657 2.05 CISPEP 1 HIS A 413 PRO A 414 0 3.51 CISPEP 2 HIS B 413 PRO B 414 0 7.62 SITE 1 AC1 4 GLY A 486 MET A 487 GLN A 488 GLU A 489 SITE 1 AC2 3 LYS A 766 ARG A 782 SER B 469 SITE 1 AC3 4 GLU A 620 ARG A 624 TYR A 636 LYS A 646 SITE 1 AC4 1 ARG A 624 SITE 1 AC5 2 GLU A 489 ARG A 492 SITE 1 AC6 4 TYR A 401 TRP A 439 GOL B 5 PHE B 440 SITE 1 AC7 5 ARG A 747 ASN A 748 TRP B 658 ARG B 747 SITE 2 AC7 5 HOH B 789 SITE 1 AC8 4 ASN A 254 GLU A 255 HOH B 18 ASP B 373 SITE 1 AC9 5 GLY B 486 MET B 487 GLN B 488 GLU B 489 SITE 2 AC9 5 HOH B 849 SITE 1 BC1 5 SER B 583 LEU B 584 SER B 585 TYR B 599 SITE 2 BC1 5 HIS B 672 SITE 1 BC2 2 ARG B 645 ASN B 652 SITE 1 BC3 6 MET A 566 PHE A 569 THR B 561 SER B 562 SITE 2 BC3 6 THR B 563 ASN B 564 SITE 1 BC4 6 TYR A 357 ASN B 356 TYR B 357 GLU B 449 SITE 2 BC4 6 HOH B 785 HOH B 806 SITE 1 BC5 3 HOH A 150 GLU A 449 TYR B 357 SITE 1 BC6 3 MET A 446 GOL A 784 TRP B 439 SITE 1 BC7 3 ARG B 399 PRO B 400 TYR B 401 SITE 1 BC8 3 TRP B 565 TYR B 599 HOH B 801 SITE 1 BC9 5 ASP A 372 ASP A 373 ARG B 234 ASN B 254 SITE 2 BC9 5 GLU B 255 CRYST1 313.672 77.310 61.508 90.00 94.54 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.003188 0.000000 0.000253 0.00000 SCALE2 0.000000 0.012935 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016309 0.00000