HEADER TRANSFERASE 07-JUN-10 3NDP TITLE CRYSTAL STRUCTURE OF HUMAN AK4(L171P) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENYLATE KINASE ISOENZYME 4; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ADENYLATE KINASE 3-LIKE, ATP-AMP TRANSPHOSPHORYLASE; COMPND 5 EC: 2.7.4.3; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AK4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS PARALLEL BETA-SHEET, ALPHA-HELICES, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.LIU,Y.WANG,Z.WEI,W.GONG REVDAT 4 03-APR-24 3NDP 1 REMARK REVDAT 3 20-MAR-24 3NDP 1 REMARK SEQADV REVDAT 2 08-NOV-17 3NDP 1 REMARK REVDAT 1 23-JUN-10 3NDP 0 JRNL AUTH R.LIU,H.XU,Z.WEI,Y.WANG,Y.LIN,W.GONG JRNL TITL CRYSTAL STRUCTURE OF HUMAN ADENYLATE KINASE 4 (L171P) JRNL TITL 2 SUGGESTS THE ROLE OF HINGE REGION IN PROTEIN DOMAIN MOTION JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 379 92 2009 JRNL REFN ISSN 0006-291X JRNL PMID 19073142 JRNL DOI 10.1016/J.BBRC.2008.12.012 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2710518.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 20311 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1037 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.009 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.44 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3090 REMARK 3 BIN R VALUE (WORKING SET) : 0.2720 REMARK 3 BIN FREE R VALUE : 0.3420 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 173 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.026 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3290 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 282 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.74000 REMARK 3 B22 (A**2) : 0.74000 REMARK 3 B33 (A**2) : -1.48000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.810 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.230 ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.030 ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : 1.890 ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.780 ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 35.87 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3NDP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000059699. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-05 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BSRF REMARK 200 BEAMLINE : 3W1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000, DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20375 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.35 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.46500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: SOLVED MODEL BY SAD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.22-1.28M (NH4)2SO4, 0.1M TRISHCL, PH REMARK 280 8.50, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.32000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 38.89500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 38.89500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.16000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 38.89500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 38.89500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 108.48000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 38.89500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 38.89500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 36.16000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 38.89500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 38.89500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 108.48000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 72.32000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 77.79000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 77.79000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 72.32000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 LYS A 4 REMARK 465 ASP A 162 REMARK 465 LYS A 163 REMARK 465 PRO A 164 REMARK 465 GLU A 165 REMARK 465 ALA A 166 REMARK 465 VAL A 167 REMARK 465 ALA A 168 REMARK 465 ALA A 169 REMARK 465 ARG A 170 REMARK 465 PRO A 171 REMARK 465 ARG A 172 REMARK 465 GLN A 173 REMARK 465 TYR A 174 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 SER B 3 REMARK 465 PRO B 115 REMARK 465 PHE B 116 REMARK 465 GLU B 117 REMARK 465 THR B 118 REMARK 465 LEU B 119 REMARK 465 LYS B 120 REMARK 465 ASP B 121 REMARK 465 LYS B 163 REMARK 465 PRO B 164 REMARK 465 GLU B 165 REMARK 465 ALA B 166 REMARK 465 VAL B 167 REMARK 465 ALA B 168 REMARK 465 ALA B 169 REMARK 465 ARG B 170 REMARK 465 PRO B 171 REMARK 465 ARG B 172 REMARK 465 GLN B 173 REMARK 465 TYR B 174 REMARK 465 LYS B 175 REMARK 465 ASP B 176 REMARK 465 VAL B 177 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 60 CG CD CE NZ REMARK 470 VAL A 68 CG1 CG2 REMARK 470 ARG A 71 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 120 CG CD CE NZ REMARK 470 ARG A 122 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 160 CG CD OE1 OE2 REMARK 470 LYS A 175 CG CD CE NZ REMARK 470 LYS A 179 CG CD CE NZ REMARK 470 HIS A 228 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 45 CG CD CE NZ REMARK 470 SER B 47 OG REMARK 470 LYS B 55 CG CD CE NZ REMARK 470 ILE B 58 CG1 CG2 CD1 REMARK 470 LYS B 60 CG CD CE NZ REMARK 470 ARG B 71 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 122 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 162 CG OD1 OD2 REMARK 470 LYS B 179 CG CD CE NZ REMARK 470 THR B 197 OG1 CG2 REMARK 470 GLU B 198 CG CD OE1 OE2 REMARK 470 LYS B 201 CG CD CE NZ REMARK 470 HIS B 228 CG ND1 CD2 CE1 NE2 REMARK 470 HIS B 230 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 122 75.79 27.99 REMARK 500 PHE A 140 -15.25 -146.28 REMARK 500 ASN A 141 62.83 -152.66 REMARK 500 PHE B 140 -17.89 -144.47 REMARK 500 ASN B 141 62.49 -150.44 REMARK 500 THR B 197 -65.79 -96.27 REMARK 500 HIS B 228 45.29 -97.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1504 DBREF 3NDP A 1 223 UNP P27144 KAD4_HUMAN 1 223 DBREF 3NDP B 1 223 UNP P27144 KAD4_HUMAN 1 223 SEQADV 3NDP PRO A 171 UNP P27144 LEU 171 ENGINEERED MUTATION SEQADV 3NDP LEU A 224 UNP P27144 EXPRESSION TAG SEQADV 3NDP GLU A 225 UNP P27144 EXPRESSION TAG SEQADV 3NDP HIS A 226 UNP P27144 EXPRESSION TAG SEQADV 3NDP HIS A 227 UNP P27144 EXPRESSION TAG SEQADV 3NDP HIS A 228 UNP P27144 EXPRESSION TAG SEQADV 3NDP HIS A 229 UNP P27144 EXPRESSION TAG SEQADV 3NDP HIS A 230 UNP P27144 EXPRESSION TAG SEQADV 3NDP HIS A 231 UNP P27144 EXPRESSION TAG SEQADV 3NDP PRO B 171 UNP P27144 LEU 171 ENGINEERED MUTATION SEQADV 3NDP LEU B 224 UNP P27144 EXPRESSION TAG SEQADV 3NDP GLU B 225 UNP P27144 EXPRESSION TAG SEQADV 3NDP HIS B 226 UNP P27144 EXPRESSION TAG SEQADV 3NDP HIS B 227 UNP P27144 EXPRESSION TAG SEQADV 3NDP HIS B 228 UNP P27144 EXPRESSION TAG SEQADV 3NDP HIS B 229 UNP P27144 EXPRESSION TAG SEQADV 3NDP HIS B 230 UNP P27144 EXPRESSION TAG SEQADV 3NDP HIS B 231 UNP P27144 EXPRESSION TAG SEQRES 1 A 231 MET ALA SER LYS LEU LEU ARG ALA VAL ILE LEU GLY PRO SEQRES 2 A 231 PRO GLY SER GLY LYS GLY THR VAL CYS GLN ARG ILE ALA SEQRES 3 A 231 GLN ASN PHE GLY LEU GLN HIS LEU SER SER GLY HIS PHE SEQRES 4 A 231 LEU ARG GLU ASN ILE LYS ALA SER THR GLU VAL GLY GLU SEQRES 5 A 231 MET ALA LYS GLN TYR ILE GLU LYS SER LEU LEU VAL PRO SEQRES 6 A 231 ASP HIS VAL ILE THR ARG LEU MET MET SER GLU LEU GLU SEQRES 7 A 231 ASN ARG ARG GLY GLN HIS TRP LEU LEU ASP GLY PHE PRO SEQRES 8 A 231 ARG THR LEU GLY GLN ALA GLU ALA LEU ASP LYS ILE CYS SEQRES 9 A 231 GLU VAL ASP LEU VAL ILE SER LEU ASN ILE PRO PHE GLU SEQRES 10 A 231 THR LEU LYS ASP ARG LEU SER ARG ARG TRP ILE HIS PRO SEQRES 11 A 231 PRO SER GLY ARG VAL TYR ASN LEU ASP PHE ASN PRO PRO SEQRES 12 A 231 HIS VAL HIS GLY ILE ASP ASP VAL THR GLY GLU PRO LEU SEQRES 13 A 231 VAL GLN GLN GLU ASP ASP LYS PRO GLU ALA VAL ALA ALA SEQRES 14 A 231 ARG PRO ARG GLN TYR LYS ASP VAL ALA LYS PRO VAL ILE SEQRES 15 A 231 GLU LEU TYR LYS SER ARG GLY VAL LEU HIS GLN PHE SER SEQRES 16 A 231 GLY THR GLU THR ASN LYS ILE TRP PRO TYR VAL TYR THR SEQRES 17 A 231 LEU PHE SER ASN LYS ILE THR PRO ILE GLN SER LYS GLU SEQRES 18 A 231 ALA TYR LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 231 MET ALA SER LYS LEU LEU ARG ALA VAL ILE LEU GLY PRO SEQRES 2 B 231 PRO GLY SER GLY LYS GLY THR VAL CYS GLN ARG ILE ALA SEQRES 3 B 231 GLN ASN PHE GLY LEU GLN HIS LEU SER SER GLY HIS PHE SEQRES 4 B 231 LEU ARG GLU ASN ILE LYS ALA SER THR GLU VAL GLY GLU SEQRES 5 B 231 MET ALA LYS GLN TYR ILE GLU LYS SER LEU LEU VAL PRO SEQRES 6 B 231 ASP HIS VAL ILE THR ARG LEU MET MET SER GLU LEU GLU SEQRES 7 B 231 ASN ARG ARG GLY GLN HIS TRP LEU LEU ASP GLY PHE PRO SEQRES 8 B 231 ARG THR LEU GLY GLN ALA GLU ALA LEU ASP LYS ILE CYS SEQRES 9 B 231 GLU VAL ASP LEU VAL ILE SER LEU ASN ILE PRO PHE GLU SEQRES 10 B 231 THR LEU LYS ASP ARG LEU SER ARG ARG TRP ILE HIS PRO SEQRES 11 B 231 PRO SER GLY ARG VAL TYR ASN LEU ASP PHE ASN PRO PRO SEQRES 12 B 231 HIS VAL HIS GLY ILE ASP ASP VAL THR GLY GLU PRO LEU SEQRES 13 B 231 VAL GLN GLN GLU ASP ASP LYS PRO GLU ALA VAL ALA ALA SEQRES 14 B 231 ARG PRO ARG GLN TYR LYS ASP VAL ALA LYS PRO VAL ILE SEQRES 15 B 231 GLU LEU TYR LYS SER ARG GLY VAL LEU HIS GLN PHE SER SEQRES 16 B 231 GLY THR GLU THR ASN LYS ILE TRP PRO TYR VAL TYR THR SEQRES 17 B 231 LEU PHE SER ASN LYS ILE THR PRO ILE GLN SER LYS GLU SEQRES 18 B 231 ALA TYR LEU GLU HIS HIS HIS HIS HIS HIS HET SO4 A 501 5 HET SO4 A 502 5 HET SO4 A 503 5 HET SO4 A 504 5 HET SO4 B1501 5 HET SO4 B1502 5 HET SO4 B1503 5 HET SO4 B1504 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 8(O4 S 2-) FORMUL 11 HOH *282(H2 O) HELIX 1 1 GLY A 17 GLY A 30 1 14 HELIX 2 2 SER A 35 SER A 47 1 13 HELIX 3 3 THR A 48 LYS A 60 1 13 HELIX 4 4 PRO A 65 ASN A 79 1 15 HELIX 5 5 THR A 93 LYS A 102 1 10 HELIX 6 6 PRO A 115 LYS A 120 1 6 HELIX 7 7 ALA A 178 ARG A 188 1 11 HELIX 8 8 GLU A 198 ASN A 212 1 15 HELIX 9 9 PRO A 216 LYS A 220 5 5 HELIX 10 10 GLY B 17 GLY B 30 1 14 HELIX 11 11 SER B 35 ALA B 46 1 12 HELIX 12 12 THR B 48 LYS B 60 1 13 HELIX 13 13 PRO B 65 ASN B 79 1 15 HELIX 14 14 THR B 93 LYS B 102 1 10 HELIX 15 15 ALA B 178 ARG B 188 1 11 HELIX 16 16 GLU B 198 ASN B 212 1 15 HELIX 17 17 PRO B 216 LYS B 220 5 5 SHEET 1 A 5 HIS A 33 LEU A 34 0 SHEET 2 A 5 TRP A 85 ASP A 88 1 O ASP A 88 N LEU A 34 SHEET 3 A 5 ARG A 7 LEU A 11 1 N ALA A 8 O LEU A 87 SHEET 4 A 5 LEU A 108 SER A 111 1 O ILE A 110 N VAL A 9 SHEET 5 A 5 LEU A 191 GLN A 193 1 O HIS A 192 N VAL A 109 SHEET 1 B 3 VAL A 135 ASN A 137 0 SHEET 2 B 3 LEU A 123 ILE A 128 -1 N TRP A 127 O TYR A 136 SHEET 3 B 3 VAL A 157 GLU A 160 -1 O GLN A 159 N ARG A 126 SHEET 1 C 5 HIS B 33 LEU B 34 0 SHEET 2 C 5 TRP B 85 ASP B 88 1 O ASP B 88 N LEU B 34 SHEET 3 C 5 ARG B 7 LEU B 11 1 N ALA B 8 O LEU B 87 SHEET 4 C 5 LEU B 108 ASN B 113 1 O ILE B 110 N VAL B 9 SHEET 5 C 5 LEU B 191 SER B 195 1 O PHE B 194 N SER B 111 SHEET 1 D 3 VAL B 135 ASN B 137 0 SHEET 2 D 3 LEU B 123 ILE B 128 -1 N TRP B 127 O TYR B 136 SHEET 3 D 3 VAL B 157 GLU B 160 -1 O GLN B 159 N ARG B 126 CISPEP 1 PHE A 90 PRO A 91 0 0.50 CISPEP 2 PHE B 90 PRO B 91 0 0.85 SITE 1 AC1 13 PRO A 13 PRO A 14 GLY A 15 SER A 16 SITE 2 AC1 13 GLY A 17 LYS A 18 GLY A 19 GLN A 158 SITE 3 AC1 13 HOH A 241 HOH A 263 HOH A 284 HOH A 286 SITE 4 AC1 13 HOH A 381 SITE 1 AC2 6 ARG A 7 ILE A 103 CYS A 104 GLU A 105 SITE 2 AC2 6 HOH A 348 HOH A 369 SITE 1 AC3 4 LYS A 220 GLU A 221 ALA A 222 HOH A 257 SITE 1 AC4 2 THR A 48 GLU A 49 SITE 1 AC5 13 PRO B 13 PRO B 14 GLY B 15 SER B 16 SITE 2 AC5 13 GLY B 17 LYS B 18 GLY B 19 GLN B 158 SITE 3 AC5 13 HOH B 243 HOH B 246 HOH B 251 HOH B 258 SITE 4 AC5 13 HOH B 314 SITE 1 AC6 4 ARG B 7 CYS B 104 GLU B 105 HOH B 272 SITE 1 AC7 5 LYS B 220 GLU B 221 ALA B 222 HOH B 237 SITE 2 AC7 5 HOH B 293 SITE 1 AC8 2 THR B 48 GLU B 49 CRYST1 77.790 77.790 144.640 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012855 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012855 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006914 0.00000