HEADER BIOSYNTHETIC PROTEIN 13-JUN-10 3NGW TITLE CRYSTAL STRUCTURE OF MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYNTHESIS TITLE 2 PROTEIN A FROM ARCHAEOGLOBUS FULGIDUS, NORTHEAST STRUCTURAL GENOMICS TITLE 3 CONSORTIUM TARGET GR189 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MOLYBDOPTERIN-GUANINE DINUCLEOTIDE BIOSYNTHESIS PROTEIN A COMPND 3 (MOBA); COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARCHAEOGLOBUS FULGIDUS; SOURCE 3 ORGANISM_TAXID: 2234; SOURCE 4 STRAIN: DSM 4304; SOURCE 5 GENE: AF_2005, MOBA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)+ MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET 21-23C KEYWDS ALPHA-BETA PROTEIN, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, KEYWDS 3 BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR F.FOROUHAR,H.NEELY,J.SEETHARAMAN,P.PATEL,R.XIAO,C.CICCOSANTI,H.WANG, AUTHOR 2 J.K.EVERETT,R.NAIR,T.B.ACTON,B.ROST,G.T.MONTELIONE,J.F.HUNT,L.TONG, AUTHOR 3 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 3 17-JUL-19 3NGW 1 REMARK LINK REVDAT 2 25-OCT-17 3NGW 1 REMARK REVDAT 1 11-AUG-10 3NGW 0 JRNL AUTH F.FOROUHAR,H.NEELY,J.SEETHARAMAN,P.PATEL,R.XIAO, JRNL AUTH 2 C.CICCOSANTI,H.WANG,J.K.EVERETT,R.NAIR,T.B.ACTON,B.ROST, JRNL AUTH 3 G.T.MONTELIONE,J.F.HUNT,L.TONG JRNL TITL NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET GR189 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 365342.156 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 84.4 REMARK 3 NUMBER OF REFLECTIONS : 18771 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.400 REMARK 3 FREE R VALUE TEST SET COUNT : 1757 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.38 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 58.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1211 REMARK 3 BIN R VALUE (WORKING SET) : 0.2090 REMARK 3 BIN FREE R VALUE : 0.2520 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 126 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.022 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1559 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 58 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.25 REMARK 3 ESD FROM SIGMAA (A) : 0.20 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.32 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.26 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.770 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 40.63 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3NGW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000059813. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97908 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21953 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : 0.06700 REMARK 200 FOR THE DATA SET : 20.0500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.49800 REMARK 200 R SYM FOR SHELL (I) : 0.43300 REMARK 200 FOR SHELL : 2.960 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SNB FOLLOWED BY SOLVE/RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: 100MM NACL, 5MM DTT, REMARK 280 0.02% NAN3, 10MM TRIS-HCL (PH 7.5) . RESERVOIR SOLUTION: 0.1M REMARK 280 BIS-TRIS PROPANE (PH 7), 20% (W/V) PEG 8K, 0.1M CALCIUM CHLORIDE REMARK 280 DIHYDRATE, AND 20% ETHYLENE GLYCOL AS THE CRYO-PROTECTANT, REMARK 280 MICROBATCH, UNDER OIL, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 58.05000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.05000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 58.05000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.05000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 58.05000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 58.05000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 58.05000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 58.05000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 58.05000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 58.05000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 58.05000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 58.05000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 58.05000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 58.05000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 58.05000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 58.05000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 58.05000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 58.05000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 58.05000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 58.05000 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 58.05000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 58.05000 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 58.05000 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 58.05000 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 58.05000 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 58.05000 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 58.05000 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 58.05000 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 58.05000 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 58.05000 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 58.05000 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 58.05000 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 58.05000 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 58.05000 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 58.05000 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 58.05000 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE CURRENT CRYSTAL STRUCTURE REVEALS THAT THE PROTEIN REMARK 300 FORMS DIMER, WHEREAS THE STATIC LIGHT SCATTERING DATA SUGGESTS THAT REMARK 300 IT FORMS MONOMER IN THE SOLUTION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 116.10000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 174.15000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CA CA A 210 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 196 REMARK 465 THR A 197 REMARK 465 GLU A 198 REMARK 465 GLY A 199 REMARK 465 LEU A 200 REMARK 465 LEU A 201 REMARK 465 GLU A 202 REMARK 465 HIS A 203 REMARK 465 HIS A 204 REMARK 465 HIS A 205 REMARK 465 HIS A 206 REMARK 465 HIS A 207 REMARK 465 HIS A 208 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MSE A 16 145.89 178.74 REMARK 500 HIS A 67 44.16 -100.00 REMARK 500 LYS A 68 50.09 38.31 REMARK 500 PHE A 83 17.48 -141.79 REMARK 500 HIS A 120 -90.97 -107.86 REMARK 500 LEU A 127 66.51 -155.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 209 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 267 O REMARK 620 2 HOH A 263 O 75.7 REMARK 620 3 ASP A 136 OD2 112.7 100.1 REMARK 620 4 HOH A 262 O 60.6 128.5 75.4 REMARK 620 5 ASP A 136 OD1 72.0 71.9 45.1 69.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 210 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 184 OD1 REMARK 620 2 ASP A 184 OD2 46.6 REMARK 620 3 HOH A 268 O 117.7 79.2 REMARK 620 4 HOH A 265 O 72.3 91.1 82.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 209 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 210 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: GR189 RELATED DB: TARGETDB DBREF 3NGW A 1 200 UNP O28274 O28274_ARCFU 1 200 SEQADV 3NGW LEU A 201 UNP O28274 EXPRESSION TAG SEQADV 3NGW GLU A 202 UNP O28274 EXPRESSION TAG SEQADV 3NGW HIS A 203 UNP O28274 EXPRESSION TAG SEQADV 3NGW HIS A 204 UNP O28274 EXPRESSION TAG SEQADV 3NGW HIS A 205 UNP O28274 EXPRESSION TAG SEQADV 3NGW HIS A 206 UNP O28274 EXPRESSION TAG SEQADV 3NGW HIS A 207 UNP O28274 EXPRESSION TAG SEQADV 3NGW HIS A 208 UNP O28274 EXPRESSION TAG SEQRES 1 A 208 MSE LYS VAL ALA VAL LEU VAL GLY GLY VAL GLY ARG ARG SEQRES 2 A 208 ILE GLY MSE GLU LYS THR GLU VAL MSE LEU CYS GLY LYS SEQRES 3 A 208 LYS LEU ILE GLU TRP VAL LEU GLU LYS TYR SER PRO PHE SEQRES 4 A 208 GLN THR VAL PHE VAL CYS ARG ASP GLU LYS GLN ALA GLU SEQRES 5 A 208 LYS LEU SER SER ARG TYR GLU ALA GLU PHE ILE TRP ASP SEQRES 6 A 208 LEU HIS LYS GLY VAL GLY SER ILE ALA GLY ILE HIS ALA SEQRES 7 A 208 ALA LEU ARG HIS PHE GLY SER CYS VAL VAL ALA ALA ILE SEQRES 8 A 208 ASP MSE PRO PHE VAL LYS PRO GLU VAL LEU GLU HIS LEU SEQRES 9 A 208 TYR LYS GLU GLY GLU LYS ALA GLY CYS ASP ALA LEU ILE SEQRES 10 A 208 PRO LYS HIS ASP TYR PRO GLU PRO LEU LEU ALA TYR TYR SEQRES 11 A 208 ALA GLU SER ALA ALA ASP GLU LEU GLU ARG ALA ILE LEU SEQRES 12 A 208 GLN GLY ILE ARG LYS ILE LEU VAL PRO LEU GLU ARG LEU SEQRES 13 A 208 ASN VAL VAL TYR TYR PRO VAL GLU LYS LEU ARG LYS PHE SEQRES 14 A 208 ASP LYS GLU LEU ILE SER PHE PHE ASN ILE ASN THR PRO SEQRES 15 A 208 ASP ASP LEU LYS ARG ALA GLU GLU ILE CYS SER LYS MSE SEQRES 16 A 208 SER THR GLU GLY LEU LEU GLU HIS HIS HIS HIS HIS HIS MODRES 3NGW MSE A 1 MET SELENOMETHIONINE MODRES 3NGW MSE A 16 MET SELENOMETHIONINE MODRES 3NGW MSE A 22 MET SELENOMETHIONINE MODRES 3NGW MSE A 93 MET SELENOMETHIONINE MODRES 3NGW MSE A 195 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 16 8 HET MSE A 22 8 HET MSE A 93 8 HET MSE A 195 8 HET CA A 209 1 HET CA A 210 1 HETNAM MSE SELENOMETHIONINE HETNAM CA CALCIUM ION FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 2 CA 2(CA 2+) FORMUL 4 HOH *58(H2 O) HELIX 1 1 GLU A 17 GLU A 20 5 4 HELIX 2 2 LEU A 28 SER A 37 1 10 HELIX 3 3 ASP A 47 SER A 56 1 10 HELIX 4 4 GLY A 71 GLY A 84 1 14 HELIX 5 5 LYS A 97 GLY A 112 1 16 HELIX 6 6 ALA A 134 GLN A 144 1 11 HELIX 7 7 ILE A 149 ARG A 155 1 7 HELIX 8 8 GLU A 164 ARG A 167 5 4 HELIX 9 9 LEU A 173 PHE A 177 5 5 HELIX 10 10 THR A 181 MSE A 195 1 15 SHEET 1 A 7 PHE A 62 ILE A 63 0 SHEET 2 A 7 GLN A 40 VAL A 44 1 N PHE A 43 O ILE A 63 SHEET 3 A 7 LYS A 2 LEU A 6 1 N VAL A 5 O VAL A 44 SHEET 4 A 7 CYS A 86 ALA A 90 1 O VAL A 87 N ALA A 4 SHEET 5 A 7 LEU A 127 TYR A 130 -1 O ALA A 128 N VAL A 88 SHEET 6 A 7 ALA A 115 LYS A 119 -1 N LEU A 116 O TYR A 129 SHEET 7 A 7 VAL A 158 PRO A 162 1 O VAL A 159 N ALA A 115 SHEET 1 B 2 MSE A 22 LEU A 23 0 SHEET 2 B 2 LYS A 26 LYS A 27 -1 O LYS A 26 N LEU A 23 SSBOND 1 CYS A 24 CYS A 192 1555 1555 2.03 LINK C MSE A 1 N LYS A 2 1555 1555 1.33 LINK C GLY A 15 N MSE A 16 1555 1555 1.33 LINK C MSE A 16 N GLU A 17 1555 1555 1.33 LINK C VAL A 21 N MSE A 22 1555 1555 1.33 LINK C MSE A 22 N LEU A 23 1555 1555 1.32 LINK C ASP A 92 N MSE A 93 1555 1555 1.33 LINK C MSE A 93 N PRO A 94 1555 1555 1.34 LINK C LYS A 194 N MSE A 195 1555 1555 1.33 LINK CA CA A 209 O HOH A 267 1555 1555 2.59 LINK OD1 ASP A 184 CA CA A 210 1555 1555 2.65 LINK CA CA A 209 O HOH A 263 1555 1555 2.78 LINK OD2 ASP A 136 CA CA A 209 1555 1555 2.81 LINK OD2 ASP A 184 CA CA A 210 1555 1555 2.86 LINK CA CA A 209 O HOH A 262 1555 1555 2.87 LINK OD1 ASP A 136 CA CA A 209 1555 1555 2.92 LINK CA CA A 210 O HOH A 268 1555 1555 2.94 LINK CA CA A 210 O HOH A 265 1555 1555 3.01 SITE 1 AC1 5 GLU A 109 ASP A 136 HOH A 262 HOH A 263 SITE 2 AC1 5 HOH A 267 SITE 1 AC2 3 ASP A 184 HOH A 265 HOH A 268 CRYST1 116.100 116.100 116.100 90.00 90.00 90.00 I 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008613 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008613 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008613 0.00000 HETATM 1 N MSE A 1 47.026 87.501 84.211 1.00 52.03 N HETATM 2 CA MSE A 1 47.316 86.212 84.896 1.00 39.07 C HETATM 3 C MSE A 1 48.390 85.390 84.200 1.00 36.90 C HETATM 4 O MSE A 1 48.317 85.149 82.993 1.00 40.52 O HETATM 5 CB MSE A 1 46.048 85.378 84.981 1.00 41.67 C HETATM 6 CG MSE A 1 46.319 83.952 85.395 1.00 50.45 C HETATM 7 SE MSE A 1 44.790 82.815 85.171 1.00 65.38 SE HETATM 8 CE MSE A 1 44.910 81.927 86.851 1.00 65.38 C