HEADER OXIDOREDUCTASE 14-JUN-10 3NHO TITLE COMPLEX OF 6-HYDROXY-L-NICOTINE OXIDASE WITH PRODUCT BOUND AT ACTIVE TITLE 2 SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 6-HYDROXY-L-NICOTINE OXIDASE; COMPND 3 CHAIN: X; COMPND 4 EC: 1.5.3.5; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARTHROBACTER NICOTINOVORANS; SOURCE 3 ORGANISM_TAXID: 29320; SOURCE 4 GENE: 6-HLNO; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: JM105; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PTRC99A KEYWDS ENANTHIOMERIC SUBSTRATE-INHIBITOR, FLAVOENZYMES, NICOTINE KEYWDS 2 DEGRADATION, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR G.S.KACHALOVA,H.D.BARTUNIK REVDAT 4 06-SEP-23 3NHO 1 REMARK SEQADV REVDAT 3 08-NOV-17 3NHO 1 REMARK REVDAT 2 10-AUG-11 3NHO 1 JRNL VERSN REVDAT 1 23-MAR-11 3NHO 0 JRNL AUTH G.S.KACHALOVA,G.P.BOURENKOV,T.MENGESDORF,S.SCHENK,H.R.MAUN, JRNL AUTH 2 M.BURGHAMMER,C.RIEKEL,K.DECKER,H.D.BARTUNIK JRNL TITL CRYSTAL STRUCTURE ANALYSIS OF FREE AND SUBSTRATE-BOUND JRNL TITL 2 6-HYDROXY-L-NICOTINE OXIDASE FROM ARTHROBACTER JRNL TITL 3 NICOTINOVORANS. JRNL REF J.MOL.BIOL. V. 396 785 2010 JRNL REFN ISSN 0022-2836 JRNL PMID 20006620 JRNL DOI 10.1016/J.JMB.2009.12.009 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH G.S.KACHALOVA,G.P.BOURENKOV,T.MENGESDORF,S.SCHENK,H.R.MAUN, REMARK 1 AUTH 2 M.BURGHAMMER,C.RIEKEL,K.DECKER,H.D.BARTUNIK REMARK 1 TITL CRYSTAL STRUCTURE ANALYSIS OF FREE AND SUBSTRATE-BOUND REMARK 1 TITL 2 6-HYDROXY-L-NICOTINE FROM ARTHROBACTER NICOTINOVORANS REMARK 1 REF J.MOL.BIOL. V. 396 785 2010 REMARK 1 REFN ISSN 0022-2836 REMARK 2 REMARK 2 RESOLUTION. 2.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 17298 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 944 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.92 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1207 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE SET COUNT : 62 REMARK 3 BIN FREE R VALUE : 0.3740 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3272 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 110 REMARK 3 SOLVENT ATOMS : 458 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.334 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.227 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.801 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.917 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3494 ; 0.019 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4762 ; 1.890 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 431 ; 7.075 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 157 ;36.192 ;23.694 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 531 ;19.132 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;19.971 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 522 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2664 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1890 ; 0.241 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2377 ; 0.328 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 357 ; 0.197 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 43 ; 0.192 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 29 ; 0.186 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2156 ; 1.009 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3410 ; 1.833 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1552 ; 2.532 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1345 ; 4.396 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3NHO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000059841. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUN-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MPG/DESY, HAMBURG REMARK 200 BEAMLINE : BW6 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.05 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18369 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.850 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 15.00 REMARK 200 R MERGE (I) : 0.14500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 15.00 REMARK 200 R MERGE FOR SHELL (I) : 0.74500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB CODE 3K7M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20MM SODIUM PHOSPHATE; 4M SODIUM REMARK 280 FORMIATE, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 Y,X,-Z REMARK 290 14555 -Y,-X,-Z REMARK 290 15555 Y,-X,Z REMARK 290 16555 -Y,X,Z REMARK 290 17555 X,Z,-Y REMARK 290 18555 -X,Z,Y REMARK 290 19555 -X,-Z,-Y REMARK 290 20555 X,-Z,Y REMARK 290 21555 Z,Y,-X REMARK 290 22555 Z,-Y,X REMARK 290 23555 -Z,Y,X REMARK 290 24555 -Z,-Y,-X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 164.72300 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS X 426 REMARK 465 HIS X 427 REMARK 465 HIS X 428 REMARK 465 HIS X 429 REMARK 465 HIS X 430 REMARK 465 HIS X 431 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP X 3 N LYS X 26 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA X 58 -41.78 -131.78 REMARK 500 ARG X 91 70.02 -115.47 REMARK 500 SER X 106 -8.44 -49.26 REMARK 500 ASP X 199 -38.33 -144.36 REMARK 500 LYS X 241 -85.22 -51.45 REMARK 500 ASP X 242 40.40 -92.10 REMARK 500 THR X 327 -175.77 -174.19 REMARK 500 PHE X 367 -64.07 -135.21 REMARK 500 PRO X 370 -86.45 -92.67 REMARK 500 HIS X 383 -61.88 -149.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP X 242 GLY X 243 149.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 GP7 X 435 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HNM X 433 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD X 434 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GP7 X 435 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3NGC RELATED DB: PDB REMARK 900 RELATED ID: 3NH3 RELATED DB: PDB REMARK 900 RELATED ID: 3NK0 RELATED DB: PDB REMARK 900 RELATED ID: 3NK1 RELATED DB: PDB REMARK 900 RELATED ID: 3NK2 RELATED DB: PDB REMARK 900 RELATED ID: 3NN0 RELATED DB: PDB REMARK 900 RELATED ID: 3NN6 RELATED DB: PDB REMARK 900 RELATED ID: 3K7M RELATED DB: PDB REMARK 900 RELATED ID: 3K7Q RELATED DB: PDB DBREF 3NHO X 1 425 UNP Q93NH4 Q93NH4_ARTNI 1 425 SEQADV 3NHO HIS X 426 UNP Q93NH4 EXPRESSION TAG SEQADV 3NHO HIS X 427 UNP Q93NH4 EXPRESSION TAG SEQADV 3NHO HIS X 428 UNP Q93NH4 EXPRESSION TAG SEQADV 3NHO HIS X 429 UNP Q93NH4 EXPRESSION TAG SEQADV 3NHO HIS X 430 UNP Q93NH4 EXPRESSION TAG SEQADV 3NHO HIS X 431 UNP Q93NH4 EXPRESSION TAG SEQRES 1 X 431 MET TYR ASP ALA ILE VAL VAL GLY GLY GLY PHE SER GLY SEQRES 2 X 431 LEU LYS ALA ALA ARG ASP LEU THR ASN ALA GLY LYS LYS SEQRES 3 X 431 VAL LEU LEU LEU GLU GLY GLY GLU ARG LEU GLY GLY ARG SEQRES 4 X 431 ALA TYR SER ARG GLU SER ARG ASN VAL PRO GLY LEU ARG SEQRES 5 X 431 VAL GLU ILE GLY GLY ALA TYR LEU HIS ARG LYS HIS HIS SEQRES 6 X 431 PRO ARG LEU ALA ALA GLU LEU ASP ARG TYR GLY ILE PRO SEQRES 7 X 431 THR ALA ALA ALA SER GLU PHE THR SER PHE ARG HIS ARG SEQRES 8 X 431 LEU GLY PRO THR ALA VAL ASP GLN ALA PHE PRO ILE PRO SEQRES 9 X 431 GLY SER GLU ALA VAL ALA VAL GLU ALA ALA THR TYR THR SEQRES 10 X 431 LEU LEU ARG ASP ALA HIS ARG ILE ASP LEU GLU LYS GLY SEQRES 11 X 431 LEU GLU ASN GLN ASP LEU GLU ASP LEU ASP ILE PRO LEU SEQRES 12 X 431 ASN GLU TYR VAL ASP LYS LEU ASP LEU PRO PRO VAL SER SEQRES 13 X 431 ARG GLN PHE LEU LEU ALA TRP ALA TRP ASN MET LEU GLY SEQRES 14 X 431 GLN PRO ALA ASP GLN ALA SER ALA LEU TRP MET LEU GLN SEQRES 15 X 431 LEU VAL ALA ALA HIS HIS TYR SER ILE LEU GLY VAL VAL SEQRES 16 X 431 LEU SER LEU ASP GLU VAL PHE SER ASN GLY SER ALA ASP SEQRES 17 X 431 LEU VAL ASP ALA MET SER GLN GLU ILE PRO GLU ILE ARG SEQRES 18 X 431 LEU GLN THR VAL VAL THR GLY ILE ASP GLN SER GLY ASP SEQRES 19 X 431 VAL VAL ASN VAL THR VAL LYS ASP GLY HIS ALA PHE GLN SEQRES 20 X 431 ALA HIS SER VAL ILE VAL ALA THR PRO MET ASN THR TRP SEQRES 21 X 431 ARG ARG ILE VAL PHE THR PRO ALA LEU PRO GLU ARG ARG SEQRES 22 X 431 ARG SER VAL ILE GLU GLU GLY HIS GLY GLY GLN GLY LEU SEQRES 23 X 431 LYS ILE LEU ILE HIS VAL ARG GLY ALA GLU ALA GLY ILE SEQRES 24 X 431 GLU CYS VAL GLY ASP GLY ILE PHE PRO THR LEU TYR ASP SEQRES 25 X 431 TYR CYS GLU VAL SER GLU SER GLU ARG LEU LEU VAL ALA SEQRES 26 X 431 PHE THR ASP SER GLY SER PHE ASP PRO THR ASP ILE GLY SEQRES 27 X 431 ALA VAL LYS ASP ALA VAL LEU TYR TYR LEU PRO GLU VAL SEQRES 28 X 431 GLU VAL LEU GLY ILE ASP TYR HIS ASP TRP ILE ALA ASP SEQRES 29 X 431 PRO LEU PHE GLU GLY PRO TRP VAL ALA PRO ARG VAL GLY SEQRES 30 X 431 GLN PHE SER ARG VAL HIS LYS GLU LEU GLY GLU PRO ALA SEQRES 31 X 431 GLY ARG ILE HIS PHE VAL GLY SER ASP VAL SER LEU GLU SEQRES 32 X 431 PHE PRO GLY TYR ILE GLU GLY ALA LEU GLU THR ALA GLU SEQRES 33 X 431 CYS ALA VAL ASN ALA ILE LEU HIS SER HIS HIS HIS HIS SEQRES 34 X 431 HIS HIS HET HNM X 433 14 HET FAD X 434 53 HET GP7 X 435 43 HETNAM HNM 1-(6-HYDROXYPYRIDIN-3-YL)-4-(METHYLAMINO)BUTAN-1-ONE HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM GP7 (1R)-2-{[(S)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1- HETNAM 2 GP7 [(PENTADECANOYLOXY)METHYL]ETHYL (12E)-HEXADECA-9,12- HETNAM 3 GP7 DIENOATE HETSYN GP7 1-PENTADECANOYL-2-HEXADECANOYL-SN-GLYCERO-3- HETSYN 2 GP7 PHOSPHOETHANOLAMINE FORMUL 2 HNM C10 H14 N2 O2 FORMUL 3 FAD C27 H33 N9 O15 P2 FORMUL 4 GP7 C36 H68 N O8 P FORMUL 5 HOH *458(H2 O) HELIX 1 1 GLY X 10 ALA X 23 1 14 HELIX 2 2 HIS X 65 TYR X 75 1 11 HELIX 3 3 PRO X 104 SER X 106 5 3 HELIX 4 4 GLU X 107 ARG X 124 1 18 HELIX 5 5 LEU X 136 ASP X 140 5 5 HELIX 6 6 PRO X 142 VAL X 147 1 6 HELIX 7 7 PRO X 153 GLY X 169 1 17 HELIX 8 8 SER X 176 ALA X 186 1 11 HELIX 9 9 SER X 190 LEU X 196 1 7 HELIX 10 10 GLY X 205 GLN X 215 1 11 HELIX 11 11 PRO X 256 ILE X 263 5 8 HELIX 12 12 PRO X 270 GLY X 280 1 11 HELIX 13 13 ASP X 336 LEU X 348 1 13 HELIX 14 14 ASP X 360 ASP X 364 5 5 HELIX 15 15 GLY X 377 VAL X 382 1 6 HELIX 16 16 LYS X 384 GLU X 388 5 5 HELIX 17 17 GLY X 397 SER X 401 5 5 HELIX 18 18 TYR X 407 HIS X 424 1 18 SHEET 1 A 7 ILE X 220 ARG X 221 0 SHEET 2 A 7 VAL X 27 LEU X 30 1 N LEU X 29 O ARG X 221 SHEET 3 A 7 TYR X 2 VAL X 7 1 N VAL X 6 O LEU X 28 SHEET 4 A 7 ALA X 245 VAL X 253 1 O ILE X 252 N VAL X 7 SHEET 5 A 7 VAL X 236 VAL X 240 -1 N VAL X 238 O PHE X 246 SHEET 6 A 7 VAL X 226 ASP X 230 -1 N ASP X 230 O ASN X 237 SHEET 7 A 7 VAL X 264 THR X 266 1 O VAL X 264 N ILE X 229 SHEET 1 B 5 ILE X 220 ARG X 221 0 SHEET 2 B 5 VAL X 27 LEU X 30 1 N LEU X 29 O ARG X 221 SHEET 3 B 5 TYR X 2 VAL X 7 1 N VAL X 6 O LEU X 28 SHEET 4 B 5 ALA X 245 VAL X 253 1 O ILE X 252 N VAL X 7 SHEET 5 B 5 ILE X 393 PHE X 395 1 O HIS X 394 N VAL X 253 SHEET 1 C 2 SER X 42 GLU X 44 0 SHEET 2 C 2 ARG X 52 GLU X 54 -1 O VAL X 53 N ARG X 43 SHEET 1 D 3 TYR X 59 LEU X 60 0 SHEET 2 D 3 GLU X 200 PHE X 202 -1 O GLU X 200 N LEU X 60 SHEET 3 D 3 THR X 79 ALA X 81 -1 N ALA X 80 O VAL X 201 SHEET 1 E 6 SER X 87 PHE X 88 0 SHEET 2 E 6 ILE X 299 VAL X 302 1 O GLU X 300 N SER X 87 SHEET 3 E 6 THR X 309 SER X 317 -1 O ASP X 312 N ILE X 299 SHEET 4 E 6 GLU X 320 ASP X 328 -1 O VAL X 324 N TYR X 311 SHEET 5 E 6 GLY X 285 ARG X 293 -1 N ILE X 288 O ALA X 325 SHEET 6 E 6 GLU X 352 ASP X 357 -1 O GLY X 355 N HIS X 291 CISPEP 1 THR X 266 PRO X 267 0 -4.29 SITE 1 AC1 11 ASN X 166 MET X 167 TRP X 179 LEU X 183 SITE 2 AC1 11 PHE X 326 TRP X 371 VAL X 372 PRO X 405 SITE 3 AC1 11 FAD X 434 HOH X 538 HOH X 586 SITE 1 AC2 38 VAL X 7 GLY X 8 GLY X 9 GLY X 10 SITE 2 AC2 38 PHE X 11 SER X 12 LEU X 30 GLU X 31 SITE 3 AC2 38 GLY X 32 GLY X 37 GLY X 38 ARG X 39 SITE 4 AC2 38 GLY X 56 GLY X 57 ALA X 58 TYR X 59 SITE 5 AC2 38 THR X 224 VAL X 226 ALA X 254 THR X 255 SITE 6 AC2 38 PRO X 256 LEU X 366 PHE X 367 PRO X 370 SITE 7 AC2 38 TRP X 371 GLY X 397 SER X 398 GLY X 406 SITE 8 AC2 38 TYR X 407 ILE X 408 HNM X 433 HOH X 469 SITE 9 AC2 38 HOH X 476 HOH X 505 HOH X 674 HOH X 746 SITE 10 AC2 38 HOH X1035 HOH X1042 SITE 1 AC3 12 GLN X 99 PRO X 104 GLY X 105 ALA X 108 SITE 2 AC3 12 THR X 115 PHE X 159 MET X 180 VAL X 194 SITE 3 AC3 12 HOH X 588 HOH X 698 HOH X 733 HOH X1019 CRYST1 164.723 164.723 164.723 90.00 90.00 90.00 P 4 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006071 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006071 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006071 0.00000 CONECT 3329 3330 3334 CONECT 3330 3329 3331 CONECT 3331 3330 3332 3336 CONECT 3332 3331 3333 CONECT 3333 3332 3334 CONECT 3334 3329 3333 3335 CONECT 3335 3334 CONECT 3336 3331 3337 3338 CONECT 3337 3336 CONECT 3338 3336 3339 CONECT 3339 3338 3340 CONECT 3340 3339 3341 CONECT 3341 3340 3342 CONECT 3342 3341 CONECT 3343 3344 3345 3346 3395 CONECT 3344 3343 CONECT 3345 3343 CONECT 3346 3343 3347 CONECT 3347 3346 3348 CONECT 3348 3347 3349 3350 CONECT 3349 3348 3354 CONECT 3350 3348 3351 3352 CONECT 3351 3350 CONECT 3352 3350 3353 3354 CONECT 3353 3352 CONECT 3354 3349 3352 3355 CONECT 3355 3354 3356 3364 CONECT 3356 3355 3357 CONECT 3357 3356 3358 CONECT 3358 3357 3359 3364 CONECT 3359 3358 3360 3361 CONECT 3360 3359 CONECT 3361 3359 3362 CONECT 3362 3361 3363 CONECT 3363 3362 3364 CONECT 3364 3355 3358 3363 CONECT 3365 3366 3382 CONECT 3366 3365 3367 3368 CONECT 3367 3366 CONECT 3368 3366 3369 CONECT 3369 3368 3370 3371 CONECT 3370 3369 CONECT 3371 3369 3372 3382 CONECT 3372 3371 3373 CONECT 3373 3372 3374 3380 CONECT 3374 3373 3375 CONECT 3375 3374 3376 3377 CONECT 3376 3375 CONECT 3377 3375 3378 3379 CONECT 3378 3377 CONECT 3379 3377 3380 CONECT 3380 3373 3379 3381 CONECT 3381 3380 3382 3383 CONECT 3382 3365 3371 3381 CONECT 3383 3381 3384 CONECT 3384 3383 3385 3386 CONECT 3385 3384 CONECT 3386 3384 3387 3388 CONECT 3387 3386 CONECT 3388 3386 3389 3390 CONECT 3389 3388 CONECT 3390 3388 3391 CONECT 3391 3390 3392 CONECT 3392 3391 3393 3394 3395 CONECT 3393 3392 CONECT 3394 3392 CONECT 3395 3343 3392 CONECT 3396 3412 3419 3430 3438 CONECT 3397 3398 3430 CONECT 3398 3397 3399 3400 CONECT 3399 3398 3420 CONECT 3400 3398 3401 CONECT 3401 3400 3402 CONECT 3402 3401 3403 3404 CONECT 3403 3402 CONECT 3404 3402 3405 CONECT 3405 3404 3406 CONECT 3406 3405 3407 CONECT 3407 3406 3408 CONECT 3408 3407 3409 CONECT 3409 3408 3410 CONECT 3410 3409 3411 CONECT 3411 3410 3413 CONECT 3412 3396 CONECT 3413 3411 3414 CONECT 3414 3413 3415 CONECT 3415 3414 3416 CONECT 3416 3415 3417 CONECT 3417 3416 3418 CONECT 3418 3417 CONECT 3419 3396 CONECT 3420 3399 3421 3422 CONECT 3421 3420 CONECT 3422 3420 3423 CONECT 3423 3422 3424 CONECT 3424 3423 3425 CONECT 3425 3424 3426 CONECT 3426 3425 3427 CONECT 3427 3426 3428 CONECT 3428 3427 3429 CONECT 3429 3428 3431 CONECT 3430 3396 3397 CONECT 3431 3429 3432 CONECT 3432 3431 3433 CONECT 3433 3432 3434 CONECT 3434 3433 3435 CONECT 3435 3434 3436 CONECT 3436 3435 3437 CONECT 3437 3436 CONECT 3438 3396 MASTER 422 0 3 18 23 0 16 6 3840 1 110 34 END