HEADER UNKNOWN FUNCTION 15-JUN-10 3NI3 TITLE 54-MEMBERED RING MACROCYCLIC BETA-SHEET PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 54-MEMBERED RING MACROCYCLIC BETA-SHEET PEPTIDE; COMPND 3 CHAIN: A, B, C, D, E, F, G, H, I, J, K, L; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES KEYWDS ARTIFICIAL BETA SHEET DIMER, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR M.R.SAWAYA,D.EISENBERG,J.S.NOWICK,T.P.KORMAN,O.KHAKSHOOR REVDAT 3 15-NOV-23 3NI3 1 REMARK LINK ATOM REVDAT 2 22-SEP-10 3NI3 1 SOURCE REVDAT 1 15-SEP-10 3NI3 0 JRNL AUTH O.KHAKSHOOR,A.J.LIN,T.P.KORMAN,M.R.SAWAYA,S.C.TSAI, JRNL AUTH 2 D.EISENBERG,J.S.NOWICK JRNL TITL X-RAY CRYSTALLOGRAPHIC STRUCTURE OF AN ARTIFICIAL BETA-SHEET JRNL TITL 2 DIMER. JRNL REF J.AM.CHEM.SOC. V. 132 11622 2010 JRNL REFN ISSN 0002-7863 JRNL PMID 20669960 JRNL DOI 10.1021/JA103438W REMARK 2 REMARK 2 RESOLUTION. 1.34 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.34 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.41 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 56095 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.150 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.157 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2804 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.38 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3673 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.39 REMARK 3 BIN R VALUE (WORKING SET) : 0.2190 REMARK 3 BIN FREE R VALUE SET COUNT : 178 REMARK 3 BIN FREE R VALUE : 0.2470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1512 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 264 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.06000 REMARK 3 B22 (A**2) : -3.14000 REMARK 3 B33 (A**2) : 3.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.009 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.021 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.169 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.968 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1612 ; 0.008 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1010 ; 0.009 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2104 ; 1.709 ; 2.351 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2326 ; 7.661 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 88 ; 6.489 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 50 ; 7.940 ;20.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 86 ; 6.126 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 134 ; 0.061 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1734 ; 0.016 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 562 ; 0.015 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 486 ; 1.476 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 194 ; 0.429 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 732 ; 2.487 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1126 ; 2.910 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1370 ; 3.883 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 2622 ; 1.469 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.883 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : -L, -H, K REMARK 3 TWIN FRACTION : 0.117 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 3NI3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1000059856. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-AUG-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97853, 0.9200, 0.9205, 0.8670 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56158 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.340 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : 0.45300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MAGNESIUM CHLORIDE, 0.1M HEPES PH REMARK 280 7.5, 30% ISOPROPANOL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.02250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.12350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.09700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 32.12350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.02250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.09700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL UNIT IS A DIMER. THERE ARE SIX BIOLOGICAL REMARK 300 UNITS IN THE ASYMMETRIC UNIT (CHAINS A&B, C&D, E&F, G&H, I&J, K&L) REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C SER B 8 NE ORN B 9 1.34 REMARK 500 C SER K 8 NE ORN K 9 1.34 REMARK 500 C SER H 8 NE ORN H 9 1.34 REMARK 500 C SER D 8 NE ORN D 9 1.34 REMARK 500 C SER L 8 NE ORN L 9 1.34 REMARK 500 C SER F 8 NE ORN F 9 1.34 REMARK 500 C SER J 8 NE ORN J 9 1.34 REMARK 500 C SER I 8 NE ORN I 9 1.34 REMARK 500 C SER A 8 NE ORN A 9 1.34 REMARK 500 C SER E 8 NE ORN E 9 1.34 REMARK 500 C SER G 8 NE ORN G 9 1.34 REMARK 500 C SER C 8 NE ORN C 9 1.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 HAO A 10 C - N - CA ANGL. DEV. = 15.8 DEGREES REMARK 500 HAO A 10 CA - C - N ANGL. DEV. = 28.1 DEGREES REMARK 500 HAO B 10 C - N - CA ANGL. DEV. = 17.0 DEGREES REMARK 500 HAO B 10 CA - C - N ANGL. DEV. = 27.1 DEGREES REMARK 500 HAO C 10 C - N - CA ANGL. DEV. = 17.9 DEGREES REMARK 500 HAO C 10 CA - C - N ANGL. DEV. = 28.0 DEGREES REMARK 500 HAO D 10 C - N - CA ANGL. DEV. = 17.2 DEGREES REMARK 500 HAO D 10 CA - C - N ANGL. DEV. = 27.7 DEGREES REMARK 500 HAO E 10 C - N - CA ANGL. DEV. = 17.0 DEGREES REMARK 500 HAO E 10 CA - C - N ANGL. DEV. = 28.0 DEGREES REMARK 500 HAO F 10 C - N - CA ANGL. DEV. = 17.9 DEGREES REMARK 500 HAO F 10 CA - C - N ANGL. DEV. = 27.1 DEGREES REMARK 500 HAO G 10 C - N - CA ANGL. DEV. = 15.8 DEGREES REMARK 500 HAO G 10 CA - C - N ANGL. DEV. = 28.1 DEGREES REMARK 500 HAO H 10 C - N - CA ANGL. DEV. = 17.4 DEGREES REMARK 500 HAO H 10 CA - C - N ANGL. DEV. = 27.5 DEGREES REMARK 500 HAO I 10 C - N - CA ANGL. DEV. = 17.9 DEGREES REMARK 500 HAO I 10 CA - C - N ANGL. DEV. = 27.7 DEGREES REMARK 500 HAO J 10 C - N - CA ANGL. DEV. = 18.5 DEGREES REMARK 500 HAO J 10 CA - C - N ANGL. DEV. = 26.6 DEGREES REMARK 500 HAO K 10 C - N - CA ANGL. DEV. = 15.5 DEGREES REMARK 500 HAO K 10 CA - C - N ANGL. DEV. = 27.9 DEGREES REMARK 500 HAO L 10 C - N - CA ANGL. DEV. = 18.1 DEGREES REMARK 500 HAO L 10 CA - C - N ANGL. DEV. = 26.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 HAO L 10 -10.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA A 13 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA B 13 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA F 13 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA G 13 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA H 13 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPA K 13 REMARK 999 REMARK 999 SEQUENCE REMARK 999 EACH CHAIN REPRESENTS ONE CYCLIC MOLECULE. DBREF 3NI3 A 1 12 PDB 3NI3 3NI3 1 12 DBREF 3NI3 B 1 12 PDB 3NI3 3NI3 1 12 DBREF 3NI3 C 1 12 PDB 3NI3 3NI3 1 12 DBREF 3NI3 D 1 12 PDB 3NI3 3NI3 1 12 DBREF 3NI3 E 1 12 PDB 3NI3 3NI3 1 12 DBREF 3NI3 F 1 12 PDB 3NI3 3NI3 1 12 DBREF 3NI3 G 1 12 PDB 3NI3 3NI3 1 12 DBREF 3NI3 H 1 12 PDB 3NI3 3NI3 1 12 DBREF 3NI3 I 1 12 PDB 3NI3 3NI3 1 12 DBREF 3NI3 J 1 12 PDB 3NI3 3NI3 1 12 DBREF 3NI3 K 1 12 PDB 3NI3 3NI3 1 12 DBREF 3NI3 L 1 12 PDB 3NI3 3NI3 1 12 SEQRES 1 A 12 ORN THR TYR PHE THR TYR 4BF SER ORN HAO LYS HAO SEQRES 1 B 12 ORN THR TYR PHE THR TYR 4BF SER ORN HAO LYS HAO SEQRES 1 C 12 ORN THR TYR PHE THR TYR 4BF SER ORN HAO LYS HAO SEQRES 1 D 12 ORN THR TYR PHE THR TYR 4BF SER ORN HAO LYS HAO SEQRES 1 E 12 ORN THR TYR PHE THR TYR 4BF SER ORN HAO LYS HAO SEQRES 1 F 12 ORN THR TYR PHE THR TYR 4BF SER ORN HAO LYS HAO SEQRES 1 G 12 ORN THR TYR PHE THR TYR 4BF SER ORN HAO LYS HAO SEQRES 1 H 12 ORN THR TYR PHE THR TYR 4BF SER ORN HAO LYS HAO SEQRES 1 I 12 ORN THR TYR PHE THR TYR 4BF SER ORN HAO LYS HAO SEQRES 1 J 12 ORN THR TYR PHE THR TYR 4BF SER ORN HAO LYS HAO SEQRES 1 K 12 ORN THR TYR PHE THR TYR 4BF SER ORN HAO LYS HAO SEQRES 1 L 12 ORN THR TYR PHE THR TYR 4BF SER ORN HAO LYS HAO MODRES 3NI3 ORN A 1 ALA ORNITHINE MODRES 3NI3 4BF A 7 TYR 4-BROMO-L-PHENYLALANINE MODRES 3NI3 ORN A 9 ALA ORNITHINE MODRES 3NI3 ORN B 1 ALA ORNITHINE MODRES 3NI3 4BF B 7 TYR 4-BROMO-L-PHENYLALANINE MODRES 3NI3 ORN B 9 ALA ORNITHINE MODRES 3NI3 ORN C 1 ALA ORNITHINE MODRES 3NI3 4BF C 7 TYR 4-BROMO-L-PHENYLALANINE MODRES 3NI3 ORN C 9 ALA ORNITHINE MODRES 3NI3 ORN D 1 ALA ORNITHINE MODRES 3NI3 4BF D 7 TYR 4-BROMO-L-PHENYLALANINE MODRES 3NI3 ORN D 9 ALA ORNITHINE MODRES 3NI3 ORN E 1 ALA ORNITHINE MODRES 3NI3 4BF E 7 TYR 4-BROMO-L-PHENYLALANINE MODRES 3NI3 ORN E 9 ALA ORNITHINE MODRES 3NI3 ORN F 1 ALA ORNITHINE MODRES 3NI3 4BF F 7 TYR 4-BROMO-L-PHENYLALANINE MODRES 3NI3 ORN F 9 ALA ORNITHINE MODRES 3NI3 ORN G 1 ALA ORNITHINE MODRES 3NI3 4BF G 7 TYR 4-BROMO-L-PHENYLALANINE MODRES 3NI3 ORN G 9 ALA ORNITHINE MODRES 3NI3 ORN H 1 ALA ORNITHINE MODRES 3NI3 4BF H 7 TYR 4-BROMO-L-PHENYLALANINE MODRES 3NI3 ORN H 9 ALA ORNITHINE MODRES 3NI3 ORN I 1 ALA ORNITHINE MODRES 3NI3 4BF I 7 TYR 4-BROMO-L-PHENYLALANINE MODRES 3NI3 ORN I 9 ALA ORNITHINE MODRES 3NI3 ORN J 1 ALA ORNITHINE MODRES 3NI3 4BF J 7 TYR 4-BROMO-L-PHENYLALANINE MODRES 3NI3 ORN J 9 ALA ORNITHINE MODRES 3NI3 ORN K 1 ALA ORNITHINE MODRES 3NI3 4BF K 7 TYR 4-BROMO-L-PHENYLALANINE MODRES 3NI3 ORN K 9 ALA ORNITHINE MODRES 3NI3 ORN L 1 ALA ORNITHINE MODRES 3NI3 4BF L 7 TYR 4-BROMO-L-PHENYLALANINE MODRES 3NI3 ORN L 9 ALA ORNITHINE HET ORN A 1 8 HET 4BF A 7 13 HET ORN A 9 8 HET HAO A 10 17 HET HAO A 12 17 HET ORN B 1 8 HET 4BF B 7 13 HET ORN B 9 8 HET HAO B 10 17 HET HAO B 12 17 HET ORN C 1 8 HET 4BF C 7 12 HET ORN C 9 8 HET HAO C 10 17 HET HAO C 12 17 HET ORN D 1 8 HET 4BF D 7 13 HET ORN D 9 8 HET HAO D 10 17 HET HAO D 12 17 HET ORN E 1 8 HET 4BF E 7 12 HET ORN E 9 8 HET HAO E 10 17 HET HAO E 12 17 HET ORN F 1 8 HET 4BF F 7 13 HET ORN F 9 8 HET HAO F 10 17 HET HAO F 12 17 HET ORN G 1 8 HET 4BF G 7 12 HET ORN G 9 8 HET HAO G 10 17 HET HAO G 12 17 HET ORN H 1 8 HET 4BF H 7 13 HET ORN H 9 8 HET HAO H 10 17 HET HAO H 12 17 HET ORN I 1 8 HET 4BF I 7 12 HET ORN I 9 8 HET HAO I 10 17 HET HAO I 12 17 HET ORN J 1 8 HET 4BF J 7 13 HET ORN J 9 8 HET HAO J 10 17 HET HAO J 12 17 HET ORN K 1 8 HET 4BF K 7 12 HET ORN K 9 8 HET HAO K 10 17 HET HAO K 12 17 HET ORN L 1 8 HET 4BF L 7 13 HET ORN L 9 8 HET HAO L 10 17 HET HAO L 12 17 HET IPA A 13 4 HET IPA B 13 4 HET IPA F 13 4 HET IPA G 13 4 HET IPA H 13 4 HET IPA K 13 4 HETNAM ORN L-ORNITHINE HETNAM 4BF 4-BROMO-L-PHENYLALANINE HETNAM HAO {[3-(HYDRAZINOCARBONYL)-4-METHOXYPHENYL]AMINO}(OXO) HETNAM 2 HAO ACETIC ACID HETNAM IPA ISOPROPYL ALCOHOL HETSYN 4BF P-BROMO-L-PHENYLALANINE HETSYN IPA 2-PROPANOL FORMUL 1 ORN 24(C5 H12 N2 O2) FORMUL 1 4BF 12(C9 H10 BR N O2) FORMUL 1 HAO 24(C10 H11 N3 O5) FORMUL 13 IPA 6(C3 H8 O) FORMUL 19 HOH *264(H2 O) SHEET 1 A 2 TYR A 3 4BF A 7 0 SHEET 2 A 2 TYR B 3 4BF B 7 -1 O 4BF B 7 N TYR A 3 SHEET 1 B 2 TYR C 3 4BF C 7 0 SHEET 2 B 2 TYR D 3 4BF D 7 -1 O 4BF D 7 N TYR C 3 SHEET 1 C 2 TYR E 3 4BF E 7 0 SHEET 2 C 2 TYR F 3 4BF F 7 -1 O 4BF F 7 N TYR E 3 SHEET 1 D 2 TYR G 3 4BF G 7 0 SHEET 2 D 2 TYR H 3 4BF H 7 -1 O 4BF H 7 N TYR G 3 SHEET 1 E 2 TYR I 3 4BF I 7 0 SHEET 2 E 2 TYR J 3 4BF J 7 -1 O 4BF J 7 N TYR I 3 SHEET 1 F 2 TYR K 3 4BF K 7 0 SHEET 2 F 2 TYR L 3 4BF L 7 -1 O 4BF L 7 N TYR K 3 LINK C ORN A 1 N THR A 2 1555 1555 1.33 LINK NE ORN A 1 C HAO A 12 1555 1555 1.34 LINK C TYR A 6 N 4BF A 7 1555 1555 1.33 LINK C 4BF A 7 N SER A 8 1555 1555 1.33 LINK C HAO A 10 N LYS A 11 1555 1555 1.34 LINK C ORN B 1 N THR B 2 1555 1555 1.33 LINK NE ORN B 1 C HAO B 12 1555 1555 1.34 LINK C TYR B 6 N 4BF B 7 1555 1555 1.33 LINK C 4BF B 7 N SER B 8 1555 1555 1.33 LINK C HAO B 10 N LYS B 11 1555 1555 1.33 LINK C ORN C 1 N THR C 2 1555 1555 1.34 LINK NE ORN C 1 C HAO C 12 1555 1555 1.34 LINK C TYR C 6 N 4BF C 7 1555 1555 1.33 LINK C 4BF C 7 N SER C 8 1555 1555 1.33 LINK C HAO C 10 N LYS C 11 1555 1555 1.34 LINK C ORN D 1 N THR D 2 1555 1555 1.33 LINK NE ORN D 1 C HAO D 12 1555 1555 1.34 LINK C TYR D 6 N 4BF D 7 1555 1555 1.33 LINK C 4BF D 7 N SER D 8 1555 1555 1.33 LINK C HAO D 10 N LYS D 11 1555 1555 1.33 LINK C ORN E 1 N THR E 2 1555 1555 1.33 LINK NE ORN E 1 C HAO E 12 1555 1555 1.34 LINK C TYR E 6 N 4BF E 7 1555 1555 1.33 LINK C 4BF E 7 N SER E 8 1555 1555 1.33 LINK C HAO E 10 N LYS E 11 1555 1555 1.33 LINK C ORN F 1 N THR F 2 1555 1555 1.34 LINK NE ORN F 1 C HAO F 12 1555 1555 1.34 LINK C TYR F 6 N 4BF F 7 1555 1555 1.32 LINK C 4BF F 7 N SER F 8 1555 1555 1.33 LINK C HAO F 10 N LYS F 11 1555 1555 1.33 LINK C ORN G 1 N THR G 2 1555 1555 1.33 LINK NE ORN G 1 C HAO G 12 1555 1555 1.34 LINK C TYR G 6 N 4BF G 7 1555 1555 1.33 LINK C 4BF G 7 N SER G 8 1555 1555 1.33 LINK C HAO G 10 N LYS G 11 1555 1555 1.34 LINK C ORN H 1 N THR H 2 1555 1555 1.33 LINK NE ORN H 1 C HAO H 12 1555 1555 1.34 LINK C TYR H 6 N 4BF H 7 1555 1555 1.33 LINK C 4BF H 7 N SER H 8 1555 1555 1.33 LINK C HAO H 10 N LYS H 11 1555 1555 1.34 LINK C ORN I 1 N THR I 2 1555 1555 1.34 LINK NE ORN I 1 C HAO I 12 1555 1555 1.34 LINK C TYR I 6 N 4BF I 7 1555 1555 1.32 LINK C 4BF I 7 N SER I 8 1555 1555 1.33 LINK C HAO I 10 N LYS I 11 1555 1555 1.33 LINK C ORN J 1 N THR J 2 1555 1555 1.33 LINK NE ORN J 1 C HAO J 12 1555 1555 1.35 LINK C TYR J 6 N 4BF J 7 1555 1555 1.33 LINK C 4BF J 7 N SER J 8 1555 1555 1.33 LINK C HAO J 10 N LYS J 11 1555 1555 1.33 LINK C ORN K 1 N THR K 2 1555 1555 1.33 LINK NE ORN K 1 C HAO K 12 1555 1555 1.34 LINK C TYR K 6 N 4BF K 7 1555 1555 1.33 LINK C 4BF K 7 N SER K 8 1555 1555 1.33 LINK C HAO K 10 N LYS K 11 1555 1555 1.34 LINK C ORN L 1 N THR L 2 1555 1555 1.33 LINK NE ORN L 1 C HAO L 12 1555 1555 1.33 LINK C TYR L 6 N 4BF L 7 1555 1555 1.33 LINK C 4BF L 7 N SER L 8 1555 1555 1.33 LINK C HAO L 10 N LYS L 11 1555 1555 1.33 SITE 1 AC1 6 ORN A 9 HOH A 69 HOH A 90 THR I 5 SITE 2 AC1 6 TYR I 6 PHE J 4 SITE 1 AC2 2 HOH A 16 PHE B 4 SITE 1 AC3 6 TYR A 6 SER A 8 THR B 2 THR F 2 SITE 2 AC3 6 PHE F 4 HOH F 151 SITE 1 AC4 5 THR E 5 HOH E 78 THR F 5 ORN G 9 SITE 2 AC4 5 HOH G 220 SITE 1 AC5 2 4BF E 7 HOH G 65 SITE 1 AC6 8 THR C 5 TYR C 6 TYR D 3 PHE D 4 SITE 2 AC6 8 ORN K 9 HAO K 10 HOH K 21 HOH K 27 CRYST1 64.045 64.194 64.247 90.00 90.00 90.00 P 21 21 21 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015614 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015578 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015565 0.00000 HETATM 1 N ORN A 1 -25.535 22.989 -20.151 1.00 21.25 N ANISOU 1 N ORN A 1 2980 2497 2595 -180 -700 336 N HETATM 2 CA ORN A 1 -25.055 23.186 -18.749 1.00 19.56 C ANISOU 2 CA ORN A 1 2663 2300 2466 -119 -648 385 C HETATM 3 CB ORN A 1 -25.420 24.363 -17.854 1.00 19.25 C ANISOU 3 CB ORN A 1 2481 2314 2519 96 -670 467 C HETATM 4 CG ORN A 1 -25.497 25.865 -17.989 1.00 19.66 C ANISOU 4 CG ORN A 1 2671 2084 2713 372 -590 632 C HETATM 5 CD ORN A 1 -24.087 26.440 -18.048 1.00 20.02 C ANISOU 5 CD ORN A 1 2706 2294 2607 191 -541 601 C HETATM 6 NE ORN A 1 -23.466 26.425 -16.735 1.00 16.84 N ANISOU 6 NE ORN A 1 2314 1683 2402 -108 -584 491 N HETATM 7 C ORN A 1 -24.709 21.862 -18.111 1.00 18.49 C ANISOU 7 C ORN A 1 2657 2139 2230 -169 -699 346 C HETATM 8 O ORN A 1 -25.466 20.907 -18.239 1.00 19.44 O ANISOU 8 O ORN A 1 2714 2430 2241 -299 -769 344 O