HEADER TRANSFERASE 15-JUN-10 3NIB TITLE TEG14 APO COMPND MOL_ID: 1; COMPND 2 MOLECULE: TEG14; COMPND 3 CHAIN: A; COMPND 4 EC: 2.8.2.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNCULTURED SOIL BACTERIUM; SOURCE 3 ORGANISM_TAXID: 164851; SOURCE 4 GENE: TEG14; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A (NOVAGEN) KEYWDS ANTIBIOTIC TRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.J.BICK,J.J.BANIK,S.A.DARST,S.F.BRADY REVDAT 3 06-SEP-23 3NIB 1 REMARK SEQADV REVDAT 2 28-MAR-12 3NIB 1 JRNL VERSN REVDAT 1 08-DEC-10 3NIB 0 JRNL AUTH M.J.BICK,J.J.BANIK,S.A.DARST,S.F.BRADY JRNL TITL THE 2.7 A RESOLUTION STRUCTURE OF THE GLYCOPEPTIDE JRNL TITL 2 SULFOTRANSFERASE TEG14 JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 66 1278 2010 JRNL REFN ISSN 0907-4449 JRNL PMID 21123867 JRNL DOI 10.1107/S0907444910036681 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.5_2) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.080 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.8 REMARK 3 NUMBER OF REFLECTIONS : 13643 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 678 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 22.7867 - 4.6074 0.97 2931 139 0.1976 0.2130 REMARK 3 2 4.6074 - 3.6619 0.98 2825 150 0.1582 0.2142 REMARK 3 3 3.6619 - 3.2005 0.93 2661 149 0.1809 0.2103 REMARK 3 4 3.2005 - 2.9085 0.81 2326 117 0.2227 0.3030 REMARK 3 5 2.9085 - 2.7004 0.79 2222 123 0.2820 0.3508 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.37 REMARK 3 B_SOL : 79.85 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.49180 REMARK 3 B22 (A**2) : 4.49180 REMARK 3 B33 (A**2) : -8.98350 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 1859 REMARK 3 ANGLE : 0.805 2521 REMARK 3 CHIRALITY : 0.052 285 REMARK 3 PLANARITY : 0.004 321 REMARK 3 DIHEDRAL : 14.590 654 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 0:12) OR CHAIN A AND (RESID REMARK 3 57:67) OR CHAIN A AND (RESID 83:90) OR CHAIN A AND REMARK 3 (RESID 157:165) REMARK 3 ORIGIN FOR THE GROUP (A): 38.6554 -31.0358 -25.7622 REMARK 3 T TENSOR REMARK 3 T11: 0.2732 T22: 0.2790 REMARK 3 T33: 0.3194 T12: -0.0728 REMARK 3 T13: 0.0064 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 1.1224 L22: 0.4728 REMARK 3 L33: 1.3974 L12: -0.0979 REMARK 3 L13: 0.4967 L23: -0.7904 REMARK 3 S TENSOR REMARK 3 S11: -0.1365 S12: 0.1187 S13: 0.4650 REMARK 3 S21: 0.0879 S22: 0.1037 S23: 0.0129 REMARK 3 S31: -0.0019 S32: -0.1867 S33: -0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 166:170) REMARK 3 ORIGIN FOR THE GROUP (A): 54.4154 -35.3535 -28.4113 REMARK 3 T TENSOR REMARK 3 T11: 0.5049 T22: 0.3202 REMARK 3 T33: 0.3311 T12: -0.0543 REMARK 3 T13: -0.0059 T23: 0.0022 REMARK 3 L TENSOR REMARK 3 L11: 0.4298 L22: 0.2447 REMARK 3 L33: 0.6956 L12: 0.1307 REMARK 3 L13: 0.4815 L23: 0.1186 REMARK 3 S TENSOR REMARK 3 S11: 0.0723 S12: 0.7348 S13: -0.4821 REMARK 3 S21: -0.0243 S22: 0.4518 S23: -0.4553 REMARK 3 S31: -0.1068 S32: 0.9596 S33: 0.0220 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 171:186) REMARK 3 ORIGIN FOR THE GROUP (A): 48.6383 -26.1737 -21.4024 REMARK 3 T TENSOR REMARK 3 T11: 0.3457 T22: 0.2566 REMARK 3 T33: 0.3288 T12: -0.0483 REMARK 3 T13: -0.0113 T23: 0.0483 REMARK 3 L TENSOR REMARK 3 L11: 0.2651 L22: 0.4315 REMARK 3 L33: 0.5573 L12: 0.0725 REMARK 3 L13: 0.3132 L23: -0.2051 REMARK 3 S TENSOR REMARK 3 S11: -0.1055 S12: 0.4843 S13: 1.1102 REMARK 3 S21: 0.1199 S22: -0.0750 S23: -0.3486 REMARK 3 S31: -0.6540 S32: -0.0688 S33: 0.0006 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 187:203) REMARK 3 ORIGIN FOR THE GROUP (A): 52.8211 -30.5503 -13.5689 REMARK 3 T TENSOR REMARK 3 T11: 0.2318 T22: 0.3755 REMARK 3 T33: 0.3244 T12: -0.0651 REMARK 3 T13: -0.0235 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 0.2604 L22: 0.4247 REMARK 3 L33: 0.6770 L12: 0.0355 REMARK 3 L13: 0.1606 L23: -0.4786 REMARK 3 S TENSOR REMARK 3 S11: -0.1612 S12: -0.1816 S13: 0.3465 REMARK 3 S21: 0.1178 S22: -0.1461 S23: 0.8226 REMARK 3 S31: -0.1719 S32: 0.1568 S33: 0.0006 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESID 204:211) REMARK 3 ORIGIN FOR THE GROUP (A): 50.6857 -47.9858 -15.4404 REMARK 3 T TENSOR REMARK 3 T11: 0.6947 T22: 0.4505 REMARK 3 T33: 0.7509 T12: -0.1584 REMARK 3 T13: -0.0426 T23: 0.0114 REMARK 3 L TENSOR REMARK 3 L11: 2.8571 L22: 0.6404 REMARK 3 L33: 0.4170 L12: -1.1508 REMARK 3 L13: 1.0174 L23: -0.5056 REMARK 3 S TENSOR REMARK 3 S11: 0.7925 S12: 0.4486 S13: -2.5544 REMARK 3 S21: 0.7609 S22: 0.7005 S23: 2.0169 REMARK 3 S31: 1.7553 S32: -0.5942 S33: 0.0368 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND (RESID 31:42) REMARK 3 ORIGIN FOR THE GROUP (A): 40.4987 -40.7667 -12.6568 REMARK 3 T TENSOR REMARK 3 T11: 0.5111 T22: 0.5812 REMARK 3 T33: 0.4826 T12: -0.0362 REMARK 3 T13: 0.0467 T23: 0.1726 REMARK 3 L TENSOR REMARK 3 L11: 0.1181 L22: 0.1659 REMARK 3 L33: 0.1896 L12: 0.1440 REMARK 3 L13: -0.1520 L23: -0.1793 REMARK 3 S TENSOR REMARK 3 S11: -0.1651 S12: -0.7365 S13: -0.8098 REMARK 3 S21: 0.6666 S22: 0.5417 S23: 0.7587 REMARK 3 S31: -0.1613 S32: -1.0264 S33: -0.0021 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN A AND (RESID 43:56) REMARK 3 ORIGIN FOR THE GROUP (A): 27.2437 -39.5568 -20.4042 REMARK 3 T TENSOR REMARK 3 T11: 0.2774 T22: 0.4590 REMARK 3 T33: 0.4135 T12: -0.1737 REMARK 3 T13: 0.0403 T23: -0.0350 REMARK 3 L TENSOR REMARK 3 L11: 0.4145 L22: 0.2551 REMARK 3 L33: 0.3192 L12: 0.3252 REMARK 3 L13: 0.1124 L23: 0.1244 REMARK 3 S TENSOR REMARK 3 S11: -0.2305 S12: -0.3866 S13: 0.3903 REMARK 3 S21: -0.6093 S22: 0.4909 S23: -0.4726 REMARK 3 S31: 0.1523 S32: 0.5242 S33: 0.0010 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN A AND (RESID 68:82) REMARK 3 ORIGIN FOR THE GROUP (A): 27.3987 -31.9227 -29.7818 REMARK 3 T TENSOR REMARK 3 T11: 0.2553 T22: 0.5557 REMARK 3 T33: 0.4074 T12: -0.1059 REMARK 3 T13: -0.0456 T23: -0.0057 REMARK 3 L TENSOR REMARK 3 L11: 0.0444 L22: 0.1561 REMARK 3 L33: 0.0917 L12: -0.0391 REMARK 3 L13: -0.0256 L23: -0.0874 REMARK 3 S TENSOR REMARK 3 S11: -0.2469 S12: 1.1500 S13: 0.5555 REMARK 3 S21: -0.0979 S22: -0.3428 S23: 0.1465 REMARK 3 S31: 0.0406 S32: -0.8382 S33: -0.0006 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN A AND (RESID 91:101) REMARK 3 ORIGIN FOR THE GROUP (A): 48.6268 -48.1953 -34.3775 REMARK 3 T TENSOR REMARK 3 T11: 0.7309 T22: 0.3472 REMARK 3 T33: 0.6312 T12: -0.0729 REMARK 3 T13: 0.2091 T23: 0.1928 REMARK 3 L TENSOR REMARK 3 L11: 0.4631 L22: 0.0149 REMARK 3 L33: 0.0114 L12: -0.0505 REMARK 3 L13: -0.0271 L23: -0.0061 REMARK 3 S TENSOR REMARK 3 S11: -0.9747 S12: -0.8676 S13: -0.8394 REMARK 3 S21: 1.0062 S22: -0.4247 S23: -2.0863 REMARK 3 S31: 0.1232 S32: 0.4133 S33: 0.0001 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN A AND (RESID 109:127) REMARK 3 ORIGIN FOR THE GROUP (A): 42.5001 -53.9483 -39.9293 REMARK 3 T TENSOR REMARK 3 T11: 0.9107 T22: 0.2738 REMARK 3 T33: 0.7684 T12: -0.1995 REMARK 3 T13: 0.2379 T23: -0.2330 REMARK 3 L TENSOR REMARK 3 L11: 4.3579 L22: 3.0015 REMARK 3 L33: 1.7938 L12: -2.8105 REMARK 3 L13: -1.7513 L23: 1.3240 REMARK 3 S TENSOR REMARK 3 S11: -0.8204 S12: 0.2215 S13: -1.4153 REMARK 3 S21: -0.1649 S22: 0.5171 S23: 0.4698 REMARK 3 S31: 1.8901 S32: -0.2892 S33: -0.0737 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN A AND (RESID 133:156) REMARK 3 ORIGIN FOR THE GROUP (A): 35.5298 -33.6840 -36.7007 REMARK 3 T TENSOR REMARK 3 T11: 0.3880 T22: 0.5309 REMARK 3 T33: 0.3526 T12: -0.0674 REMARK 3 T13: -0.0928 T23: 0.0458 REMARK 3 L TENSOR REMARK 3 L11: 1.2294 L22: 1.0716 REMARK 3 L33: 1.1216 L12: -0.0208 REMARK 3 L13: -0.2866 L23: 0.4765 REMARK 3 S TENSOR REMARK 3 S11: 0.1124 S12: 0.9264 S13: 0.0359 REMARK 3 S21: -0.8635 S22: -0.2962 S23: 0.0932 REMARK 3 S31: -0.3287 S32: -1.2354 S33: -0.0134 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN A AND (RESID 241:248) REMARK 3 ORIGIN FOR THE GROUP (A): 54.5776 -55.0434 -40.2967 REMARK 3 T TENSOR REMARK 3 T11: 0.9493 T22: 0.4237 REMARK 3 T33: 0.8996 T12: 0.0556 REMARK 3 T13: 0.2763 T23: -0.1377 REMARK 3 L TENSOR REMARK 3 L11: 0.0769 L22: 0.0402 REMARK 3 L33: 0.0273 L12: 0.0364 REMARK 3 L13: -0.0406 L23: -0.0317 REMARK 3 S TENSOR REMARK 3 S11: 0.6104 S12: -0.3628 S13: -0.1450 REMARK 3 S21: -0.4927 S22: -0.1828 S23: 0.0347 REMARK 3 S31: 0.3954 S32: 0.9898 S33: 0.0043 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN A AND (RESID 249:261) REMARK 3 ORIGIN FOR THE GROUP (A): 50.3530 -48.1628 -47.2467 REMARK 3 T TENSOR REMARK 3 T11: 0.6285 T22: 0.4706 REMARK 3 T33: 0.4844 T12: -0.2308 REMARK 3 T13: 0.2821 T23: -0.1713 REMARK 3 L TENSOR REMARK 3 L11: 0.3738 L22: 0.1305 REMARK 3 L33: 0.1902 L12: 0.2075 REMARK 3 L13: -0.2651 L23: -0.1309 REMARK 3 S TENSOR REMARK 3 S11: -0.3732 S12: 0.7675 S13: -0.0482 REMARK 3 S21: -0.5748 S22: -0.0817 S23: 0.1043 REMARK 3 S31: 0.0430 S32: -1.0929 S33: -0.0001 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN A AND (RESID 262:275) REMARK 3 ORIGIN FOR THE GROUP (A): 47.2975 -36.4494 -43.7925 REMARK 3 T TENSOR REMARK 3 T11: 0.4923 T22: 0.4803 REMARK 3 T33: 0.3015 T12: -0.1942 REMARK 3 T13: 0.0132 T23: -0.0727 REMARK 3 L TENSOR REMARK 3 L11: 0.5540 L22: 0.2630 REMARK 3 L33: 0.2033 L12: 0.1064 REMARK 3 L13: -0.3192 L23: -0.1370 REMARK 3 S TENSOR REMARK 3 S11: -0.7898 S12: 1.2986 S13: 0.3419 REMARK 3 S21: 0.1948 S22: 0.3281 S23: 0.4569 REMARK 3 S31: 0.2231 S32: -1.1360 S33: -0.0003 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN A AND (RESID 13:30) REMARK 3 ORIGIN FOR THE GROUP (A): 45.9061 -35.9029 -16.4765 REMARK 3 T TENSOR REMARK 3 T11: 0.1596 T22: 0.2906 REMARK 3 T33: 0.2770 T12: 0.0184 REMARK 3 T13: -0.0120 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 0.7499 L22: 1.2437 REMARK 3 L33: 1.8386 L12: 0.4922 REMARK 3 L13: 0.2602 L23: 0.7471 REMARK 3 S TENSOR REMARK 3 S11: 0.2166 S12: -0.4624 S13: -0.2425 REMARK 3 S21: 0.6823 S22: -0.0992 S23: 0.2721 REMARK 3 S31: 0.7963 S32: -0.2223 S33: 0.0028 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3NIB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000059864. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-SEP-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : VARIMAX CONFOCAL MAX-FLUX OPTICS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13977 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 200 DATA REDUNDANCY : 2.700 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : 0.07300 REMARK 200 FOR THE DATA SET : 14.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.49400 REMARK 200 R SYM FOR SHELL (I) : 0.49400 REMARK 200 FOR SHELL : 2.490 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: TEG12 TERNARY, PDB CODE 3MGB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALLIZED AT 20MG/ML USING JCSG REMARK 280 SOLUTION CORE II NUMBER 3 (1.0 M SODIUM CITRATE, 0.1 M CHES, PH REMARK 280 9.5) AS THE PRECIPITANT. DROP WAS A 1:1 MIXTURE OF PROTEIN AND REMARK 280 CRYSTALLIZATION SOLUTION. RESERVOIR VOLUME WAS 500 UL. CRYSTALS REMARK 280 APPEARED OVERNIGHT, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 295.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 24.93567 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 49.87133 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 49.87133 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 24.93567 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -49.87133 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -33 REMARK 465 GLY A -32 REMARK 465 SER A -31 REMARK 465 SER A -30 REMARK 465 HIS A -29 REMARK 465 HIS A -28 REMARK 465 HIS A -27 REMARK 465 HIS A -26 REMARK 465 HIS A -25 REMARK 465 HIS A -24 REMARK 465 SER A -23 REMARK 465 SER A -22 REMARK 465 GLY A -21 REMARK 465 LEU A -20 REMARK 465 VAL A -19 REMARK 465 PRO A -18 REMARK 465 ARG A -17 REMARK 465 GLY A -16 REMARK 465 SER A -15 REMARK 465 HIS A -14 REMARK 465 MET A -13 REMARK 465 ALA A -12 REMARK 465 SER A -11 REMARK 465 MET A -10 REMARK 465 THR A -9 REMARK 465 GLY A -8 REMARK 465 GLY A -7 REMARK 465 GLN A -6 REMARK 465 GLN A -5 REMARK 465 MET A -4 REMARK 465 GLY A -3 REMARK 465 ARG A -2 REMARK 465 GLY A -1 REMARK 465 MET A 102 REMARK 465 THR A 103 REMARK 465 ALA A 104 REMARK 465 ILE A 105 REMARK 465 SER A 106 REMARK 465 ARG A 107 REMARK 465 ASP A 108 REMARK 465 MET A 128 REMARK 465 ARG A 129 REMARK 465 GLY A 130 REMARK 465 ARG A 131 REMARK 465 GLY A 132 REMARK 465 GLN A 215 REMARK 465 GLN A 216 REMARK 465 GLY A 217 REMARK 465 GLN A 218 REMARK 465 TRP A 219 REMARK 465 ALA A 220 REMARK 465 SER A 221 REMARK 465 MET A 222 REMARK 465 THR A 223 REMARK 465 GLY A 224 REMARK 465 GLY A 225 REMARK 465 ARG A 226 REMARK 465 GLY A 227 REMARK 465 GLY A 228 REMARK 465 GLU A 229 REMARK 465 LYS A 230 REMARK 465 HIS A 231 REMARK 465 PRO A 232 REMARK 465 PHE A 233 REMARK 465 VAL A 234 REMARK 465 GLY A 235 REMARK 465 GLU A 236 REMARK 465 GLY A 237 REMARK 465 ARG A 238 REMARK 465 TYR A 239 REMARK 465 ASP A 240 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 0 OG REMARK 470 LYS A 29 CD CE NZ REMARK 470 LYS A 35 CG CD CE NZ REMARK 470 GLU A 38 CG CD OE1 OE2 REMARK 470 GLU A 57 CG CD OE1 OE2 REMARK 470 LYS A 60 CG CD CE NZ REMARK 470 ARG A 101 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 109 CG OD1 OD2 REMARK 470 MET A 110 CG SD CE REMARK 470 GLU A 111 CG CD OE1 OE2 REMARK 470 SER A 112 OG REMARK 470 THR A 115 OG1 CG2 REMARK 470 ARG A 118 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 146 CD1 REMARK 470 SER A 150 OG REMARK 470 ARG A 154 CD NE CZ NH1 NH2 REMARK 470 GLU A 192 CD OE1 OE2 REMARK 470 GLU A 208 CG CD OE1 OE2 REMARK 470 LYS A 211 CG CD CE NZ REMARK 470 ARG A 212 CD NE CZ NH1 NH2 REMARK 470 GLN A 214 CG CD OE1 NE2 REMARK 470 GLN A 241 CG CD OE1 NE2 REMARK 470 GLU A 248 CG CD OE1 OE2 REMARK 470 GLU A 256 CG CD OE1 OE2 REMARK 470 ASP A 261 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 211 -70.92 -47.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NHE A 276 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 277 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 278 DBREF 3NIB A 1 275 UNP B7T1D9 B7T1D9_9BACT 1 275 SEQADV 3NIB MET A -33 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB GLY A -32 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB SER A -31 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB SER A -30 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB HIS A -29 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB HIS A -28 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB HIS A -27 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB HIS A -26 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB HIS A -25 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB HIS A -24 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB SER A -23 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB SER A -22 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB GLY A -21 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB LEU A -20 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB VAL A -19 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB PRO A -18 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB ARG A -17 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB GLY A -16 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB SER A -15 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB HIS A -14 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB MET A -13 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB ALA A -12 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB SER A -11 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB MET A -10 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB THR A -9 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB GLY A -8 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB GLY A -7 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB GLN A -6 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB GLN A -5 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB MET A -4 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB GLY A -3 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB ARG A -2 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB GLY A -1 UNP B7T1D9 EXPRESSION TAG SEQADV 3NIB SER A 0 UNP B7T1D9 EXPRESSION TAG SEQRES 1 A 309 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 309 LEU VAL PRO ARG GLY SER HIS MET ALA SER MET THR GLY SEQRES 3 A 309 GLY GLN GLN MET GLY ARG GLY SER MET ASN GLY ILE ARG SEQRES 4 A 309 TRP ILE ALA SER TYR PRO LYS ALA GLY ASN THR TRP LEU SEQRES 5 A 309 ARG CYS MET LEU ALA ALA TYR ILE THR GLY LYS ALA PRO SEQRES 6 A 309 GLN THR TRP LYS ASP MET GLU THR VAL SER LEU GLU LEU SEQRES 7 A 309 GLU GLY MET LEU HIS LEU GLY ASP MET PRO PRO THR GLU SEQRES 8 A 309 PRO THR LYS PRO VAL LEU VAL LYS THR HIS LEU LYS ALA SEQRES 9 A 309 ASP VAL PRO VAL LEU GLY LEU TYR SER GLU ALA THR ALA SEQRES 10 A 309 LYS VAL LEU TYR LEU VAL ARG ASN PRO ARG ASP ILE LEU SEQRES 11 A 309 LEU SER ALA MET ARG MET THR ALA ILE SER ARG ASP ASP SEQRES 12 A 309 MET GLU SER SER ARG THR PHE ALA ARG ASP PHE ILE ALA SEQRES 13 A 309 ASN GLU GLY LEU ARG MET ARG GLY ARG GLY GLY GLY ALA SEQRES 14 A 309 GLY LEU GLY SER TRP PRO GLU ASN VAL ARG ILE TRP THR SEQRES 15 A 309 GLU SER SER ARG ASP ARG PHE PRO ASN ALA ASP VAL LEU SEQRES 16 A 309 THR MET ARG TYR GLU ASP LEU LYS GLY ASP PRO VAL ALA SEQRES 17 A 309 ARG PHE SER GLU ILE VAL GLU PHE LEU ASP LEU GLY ASP SEQRES 18 A 309 PRO VAL ASP ILE GLU ASP ILE ARG ARG ALA VAL ALA ALA SEQRES 19 A 309 CYS THR LEU GLU ARG MET ARG GLU LEU GLU LYS ARG SER SEQRES 20 A 309 GLN GLN GLN GLY GLN TRP ALA SER MET THR GLY GLY ARG SEQRES 21 A 309 GLY GLY GLU LYS HIS PRO PHE VAL GLY GLU GLY ARG TYR SEQRES 22 A 309 ASP GLN SER LEU SER PHE LEU GLY GLU ASP ILE GLU SER SEQRES 23 A 309 ALA TYR GLN GLU LEU LEU HIS GLY ASP SER GLU PHE ALA SEQRES 24 A 309 HIS TYR ALA LYS GLN TYR GLY TYR ALA GLY HET NHE A 276 13 HET GOL A 277 6 HET GOL A 278 6 HETNAM NHE 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID HETNAM GOL GLYCEROL HETSYN NHE N-CYCLOHEXYLTAURINE; CHES HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 NHE C8 H17 N O3 S FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 HOH *54(H2 O) HELIX 1 1 GLY A 14 GLY A 28 1 15 HELIX 2 2 THR A 33 VAL A 40 1 8 HELIX 3 3 LEU A 44 LEU A 50 1 7 HELIX 4 4 VAL A 72 LEU A 77 1 6 HELIX 5 5 ASN A 91 MET A 100 1 10 HELIX 6 6 ASP A 109 GLU A 124 1 16 HELIX 7 7 SER A 139 PHE A 155 1 17 HELIX 8 8 TYR A 165 ASP A 171 1 7 HELIX 9 9 ASP A 171 ASP A 184 1 14 HELIX 10 10 ASP A 190 CYS A 201 1 12 HELIX 11 11 THR A 202 SER A 213 1 12 HELIX 12 12 GLY A 247 GLY A 260 1 14 HELIX 13 13 SER A 262 TYR A 271 1 10 SHEET 1 A 5 SER A 41 GLU A 43 0 SHEET 2 A 5 PRO A 61 THR A 66 1 O LYS A 65 N LEU A 42 SHEET 3 A 5 GLY A 3 SER A 9 1 N ARG A 5 O VAL A 62 SHEET 4 A 5 THR A 82 VAL A 89 1 O LEU A 86 N ALA A 8 SHEET 5 A 5 ASP A 159 ARG A 164 1 O LEU A 161 N TYR A 87 SSBOND 1 CYS A 20 CYS A 201 1555 1555 2.04 SITE 1 AC1 10 LYS A 12 ALA A 13 GLY A 14 ASN A 15 SITE 2 AC1 10 THR A 16 TRP A 17 TYR A 165 LEU A 203 SITE 3 AC1 10 MET A 206 GOL A 278 SITE 1 AC2 5 GLU A 38 THR A 39 VAL A 40 VAL A 62 SITE 2 AC2 5 LEU A 63 SITE 1 AC3 4 LYS A 12 ARG A 90 SER A 98 NHE A 276 CRYST1 112.194 112.194 74.807 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008913 0.005146 0.000000 0.00000 SCALE2 0.000000 0.010292 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013368 0.00000