data_3NKV # _entry.id 3NKV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.284 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3NKV RCSB RCSB059956 WWPDB D_1000059956 # _pdbx_database_status.entry_id 3NKV _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-06-21 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mueller, M.P.' 1 'Peters, H.' 2 'Blankenfeldt, W.' 3 'Goody, R.S.' 4 'Itzen, A.' 5 # _citation.id primary _citation.title 'The Legionella effector protein DrrA AMPylates the membrane traffic regulator Rab1b.' _citation.journal_abbrev Science _citation.journal_volume 329 _citation.page_first 946 _citation.page_last 949 _citation.year 2010 _citation.journal_id_ASTM SCIEAS _citation.country US _citation.journal_id_ISSN 0036-8075 _citation.journal_id_CSD 0038 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20651120 _citation.pdbx_database_id_DOI 10.1126/science.1192276 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Muller, M.P.' 1 primary 'Peters, H.' 2 primary 'Blumer, J.' 3 primary 'Blankenfeldt, W.' 4 primary 'Goody, R.S.' 5 primary 'Itzen, A.' 6 # _cell.entry_id 3NKV _cell.length_a 34.970 _cell.length_b 100.589 _cell.length_c 45.071 _cell.angle_alpha 90.00 _cell.angle_beta 102.43 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3NKV _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ras-related protein Rab-1B' 19752.369 2 ? ? Rab1b-AMP ? 2 non-polymer syn 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' 522.196 2 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 4 non-polymer syn 'BARIUM ION' 137.327 2 ? ? ? ? 5 non-polymer syn 'ADENOSINE MONOPHOSPHATE' 347.221 2 ? ? ? ? 6 water nat water 18.015 245 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GHMPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYR GAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVE QAFMTMAAEIKKRMG ; _entity_poly.pdbx_seq_one_letter_code_can ;GHMPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYR GAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVE QAFMTMAAEIKKRMG ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 MET n 1 4 PRO n 1 5 GLU n 1 6 TYR n 1 7 ASP n 1 8 TYR n 1 9 LEU n 1 10 PHE n 1 11 LYS n 1 12 LEU n 1 13 LEU n 1 14 LEU n 1 15 ILE n 1 16 GLY n 1 17 ASP n 1 18 SER n 1 19 GLY n 1 20 VAL n 1 21 GLY n 1 22 LYS n 1 23 SER n 1 24 CYS n 1 25 LEU n 1 26 LEU n 1 27 LEU n 1 28 ARG n 1 29 PHE n 1 30 ALA n 1 31 ASP n 1 32 ASP n 1 33 THR n 1 34 TYR n 1 35 THR n 1 36 GLU n 1 37 SER n 1 38 TYR n 1 39 ILE n 1 40 SER n 1 41 THR n 1 42 ILE n 1 43 GLY n 1 44 VAL n 1 45 ASP n 1 46 PHE n 1 47 LYS n 1 48 ILE n 1 49 ARG n 1 50 THR n 1 51 ILE n 1 52 GLU n 1 53 LEU n 1 54 ASP n 1 55 GLY n 1 56 LYS n 1 57 THR n 1 58 ILE n 1 59 LYS n 1 60 LEU n 1 61 GLN n 1 62 ILE n 1 63 TRP n 1 64 ASP n 1 65 THR n 1 66 ALA n 1 67 GLY n 1 68 GLN n 1 69 GLU n 1 70 ARG n 1 71 PHE n 1 72 ARG n 1 73 THR n 1 74 ILE n 1 75 THR n 1 76 SER n 1 77 SER n 1 78 TYR n 1 79 TYR n 1 80 ARG n 1 81 GLY n 1 82 ALA n 1 83 HIS n 1 84 GLY n 1 85 ILE n 1 86 ILE n 1 87 VAL n 1 88 VAL n 1 89 TYR n 1 90 ASP n 1 91 VAL n 1 92 THR n 1 93 ASP n 1 94 GLN n 1 95 GLU n 1 96 SER n 1 97 TYR n 1 98 ALA n 1 99 ASN n 1 100 VAL n 1 101 LYS n 1 102 GLN n 1 103 TRP n 1 104 LEU n 1 105 GLN n 1 106 GLU n 1 107 ILE n 1 108 ASP n 1 109 ARG n 1 110 TYR n 1 111 ALA n 1 112 SER n 1 113 GLU n 1 114 ASN n 1 115 VAL n 1 116 ASN n 1 117 LYS n 1 118 LEU n 1 119 LEU n 1 120 VAL n 1 121 GLY n 1 122 ASN n 1 123 LYS n 1 124 SER n 1 125 ASP n 1 126 LEU n 1 127 THR n 1 128 THR n 1 129 LYS n 1 130 LYS n 1 131 VAL n 1 132 VAL n 1 133 ASP n 1 134 ASN n 1 135 THR n 1 136 THR n 1 137 ALA n 1 138 LYS n 1 139 GLU n 1 140 PHE n 1 141 ALA n 1 142 ASP n 1 143 SER n 1 144 LEU n 1 145 GLY n 1 146 ILE n 1 147 PRO n 1 148 PHE n 1 149 LEU n 1 150 GLU n 1 151 THR n 1 152 SER n 1 153 ALA n 1 154 LYS n 1 155 ASN n 1 156 ALA n 1 157 THR n 1 158 ASN n 1 159 VAL n 1 160 GLU n 1 161 GLN n 1 162 ALA n 1 163 PHE n 1 164 MET n 1 165 THR n 1 166 MET n 1 167 ALA n 1 168 ALA n 1 169 GLU n 1 170 ILE n 1 171 LYS n 1 172 LYS n 1 173 ARG n 1 174 MET n 1 175 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'RAB1B, RAB1B_HUMAN' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMAL _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RAB1B_HUMAN _struct_ref.pdbx_db_accession Q9H0U4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAH GIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAF MTMAAEIKKRMG ; _struct_ref.pdbx_align_begin 3 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3NKV A 4 ? 175 ? Q9H0U4 3 ? 174 ? 3 174 2 1 3NKV B 4 ? 175 ? Q9H0U4 3 ? 174 ? 3 174 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3NKV GLY A 1 ? UNP Q9H0U4 ? ? 'EXPRESSION TAG' 0 1 1 3NKV HIS A 2 ? UNP Q9H0U4 ? ? 'EXPRESSION TAG' 1 2 1 3NKV MET A 3 ? UNP Q9H0U4 ? ? 'EXPRESSION TAG' 2 3 2 3NKV GLY B 1 ? UNP Q9H0U4 ? ? 'EXPRESSION TAG' 0 4 2 3NKV HIS B 2 ? UNP Q9H0U4 ? ? 'EXPRESSION TAG' 1 5 2 3NKV MET B 3 ? UNP Q9H0U4 ? ? 'EXPRESSION TAG' 2 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 AMP non-polymer . 'ADENOSINE MONOPHOSPHATE' ? 'C10 H14 N5 O7 P' 347.221 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BA non-polymer . 'BARIUM ION' ? 'Ba 2' 137.327 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GNP non-polymer . 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' ? 'C10 H17 N6 O13 P3' 522.196 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3NKV _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.00 _exptl_crystal.density_percent_sol 37.50 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '15% (v/v) isopropanol, 15% (w/v) PEG4000, 0.1 M imidazole, 10 mM BaCl2, pH 6.0, vapor diffusion, hanging drop, temperature 298K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'PILATUS 6M' _diffrn_detector.pdbx_collection_date 2010-02-05 _diffrn_detector.details 'SI(111)' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111) MONOCHROMATOR' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9786 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_wavelength 0.9786 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3NKV _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 19.800 _reflns.d_resolution_high 1.700 _reflns.number_obs 33392 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.05300 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.8000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.70 _reflns_shell.d_res_low 1.80 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.31300 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.500 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3NKV _refine.ls_number_reflns_obs 31709 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.80 _refine.ls_d_res_high 1.70 _refine.ls_percent_reflns_obs 99.84 _refine.ls_R_factor_obs 0.15150 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.14958 _refine.ls_R_factor_R_free 0.18686 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1658 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.975 _refine.correlation_coeff_Fo_to_Fc_free 0.962 _refine.B_iso_mean 31.283 _refine.aniso_B[1][1] 0.47 _refine.aniso_B[2][2] -1.40 _refine.aniso_B[3][3] 0.30 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -1.45 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.103 _refine.pdbx_overall_ESU_R_Free 0.101 _refine.overall_SU_ML 0.072 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 4.830 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2701 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 112 _refine_hist.number_atoms_solvent 245 _refine_hist.number_atoms_total 3058 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 19.80 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.023 0.022 ? 2891 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1914 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.053 2.004 ? 3930 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.060 3.000 ? 4674 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.064 5.000 ? 346 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.981 24.488 ? 127 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.405 15.000 ? 517 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.547 15.000 ? 16 'X-RAY DIFFRACTION' ? r_chiral_restr 0.129 0.200 ? 451 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.020 ? 3115 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 595 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.395 1.500 ? 1685 'X-RAY DIFFRACTION' ? r_mcbond_other 0.475 1.500 ? 697 'X-RAY DIFFRACTION' ? r_mcangle_it 2.421 2.000 ? 2723 'X-RAY DIFFRACTION' ? r_scbond_it 3.620 3.000 ? 1204 'X-RAY DIFFRACTION' ? r_scangle_it 5.726 4.500 ? 1197 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.700 _refine_ls_shell.d_res_low 1.744 _refine_ls_shell.number_reflns_R_work 2366 _refine_ls_shell.R_factor_R_work 0.193 _refine_ls_shell.percent_reflns_obs 99.88 _refine_ls_shell.R_factor_R_free 0.239 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 129 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3NKV _struct.title 'Crystal structure of Rab1b covalently modified with AMP at Y77' _struct.pdbx_descriptor 'Ras-related protein Rab-1B' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3NKV _struct_keywords.text 'posttranslational modification, AMPylation, adenylylation, Rab1b, vesicular transport, PROTEIN TRANSPORT' _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 2 ? H N N 3 ? I N N 4 ? J N N 5 ? K N N 6 ? L N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 21 ? ASP A 32 ? GLY A 20 ASP A 31 1 ? 12 HELX_P HELX_P2 2 GLN A 68 ? ARG A 70 ? GLN A 67 ARG A 69 5 ? 3 HELX_P HELX_P3 3 PHE A 71 ? SER A 77 ? PHE A 70 SER A 76 1 ? 7 HELX_P HELX_P4 4 ASP A 93 ? ASN A 99 ? ASP A 92 ASN A 98 1 ? 7 HELX_P HELX_P5 5 ASN A 99 ? ALA A 111 ? ASN A 98 ALA A 110 1 ? 13 HELX_P HELX_P6 6 ASP A 133 ? LEU A 144 ? ASP A 132 LEU A 143 1 ? 12 HELX_P HELX_P7 7 ASN A 158 ? ARG A 173 ? ASN A 157 ARG A 172 1 ? 16 HELX_P HELX_P8 8 GLY B 21 ? ASP B 32 ? GLY B 20 ASP B 31 1 ? 12 HELX_P HELX_P9 9 GLN B 68 ? ARG B 70 ? GLN B 67 ARG B 69 5 ? 3 HELX_P HELX_P10 10 PHE B 71 ? SER B 77 ? PHE B 70 SER B 76 1 ? 7 HELX_P HELX_P11 11 ASP B 93 ? ASN B 99 ? ASP B 92 ASN B 98 1 ? 7 HELX_P HELX_P12 12 ASN B 99 ? ALA B 111 ? ASN B 98 ALA B 110 1 ? 13 HELX_P HELX_P13 13 LEU B 126 ? LYS B 130 ? LEU B 125 LYS B 129 5 ? 5 HELX_P HELX_P14 14 ASP B 133 ? LEU B 144 ? ASP B 132 LEU B 143 1 ? 12 HELX_P HELX_P15 15 ASN B 158 ? MET B 174 ? ASN B 157 MET B 173 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? C GNP . O2G ? ? ? 1_555 D MG . MG ? ? A GNP 400 A MG 500 1_555 ? ? ? ? ? ? ? 1.985 ? metalc2 metalc ? ? B SER 23 OG ? ? ? 1_555 H MG . MG ? ? B SER 22 B MG 500 1_555 ? ? ? ? ? ? ? 2.048 ? metalc3 metalc ? ? G GNP . O2G ? ? ? 1_555 H MG . MG ? ? B GNP 400 B MG 500 1_555 ? ? ? ? ? ? ? 2.033 ? metalc4 metalc ? ? C GNP . O2B ? ? ? 1_555 D MG . MG ? ? A GNP 400 A MG 500 1_555 ? ? ? ? ? ? ? 2.049 ? metalc5 metalc ? ? H MG . MG ? ? ? 1_555 L HOH . O ? ? B MG 500 B HOH 185 1_555 ? ? ? ? ? ? ? 2.029 ? metalc6 metalc ? ? D MG . MG ? ? ? 1_555 K HOH . O ? ? A MG 500 A HOH 218 1_555 ? ? ? ? ? ? ? 2.078 ? metalc7 metalc ? ? H MG . MG ? ? ? 1_555 L HOH . O ? ? B MG 500 B HOH 199 1_555 ? ? ? ? ? ? ? 2.059 ? metalc8 metalc ? ? D MG . MG ? ? ? 1_555 K HOH . O ? ? A MG 500 A HOH 189 1_555 ? ? ? ? ? ? ? 2.053 ? metalc9 metalc ? ? A SER 23 OG ? ? ? 1_555 D MG . MG ? ? A SER 22 A MG 500 1_555 ? ? ? ? ? ? ? 2.073 ? metalc10 metalc ? ? A THR 41 OG1 ? ? ? 1_555 D MG . MG ? ? A THR 40 A MG 500 1_555 ? ? ? ? ? ? ? 2.079 ? metalc11 metalc ? ? B THR 41 OG1 ? ? ? 1_555 H MG . MG ? ? B THR 40 B MG 500 1_555 ? ? ? ? ? ? ? 2.129 ? metalc12 metalc ? ? G GNP . O2B ? ? ? 1_555 H MG . MG ? ? B GNP 400 B MG 500 1_555 ? ? ? ? ? ? ? 2.086 ? metalc13 metalc ? ? I BA . BA ? ? ? 1_555 L HOH . O ? ? B BA 175 B HOH 187 1_555 ? ? ? ? ? ? ? 2.591 ? metalc14 metalc ? ? E BA . BA ? ? ? 1_555 K HOH . O ? ? A BA 175 A HOH 261 1_555 ? ? ? ? ? ? ? 2.645 ? metalc15 metalc ? ? I BA . BA ? ? ? 1_555 L HOH . O ? ? B BA 175 B HOH 301 1_555 ? ? ? ? ? ? ? 2.548 ? metalc16 metalc ? ? B THR 135 OG1 ? ? ? 1_555 I BA . BA ? ? B THR 134 B BA 175 1_555 ? ? ? ? ? ? ? 2.717 ? metalc17 metalc ? ? B ASP 133 OD2 ? ? ? 1_555 I BA . BA ? ? B ASP 132 B BA 175 1_555 ? ? ? ? ? ? ? 2.832 ? metalc18 metalc ? ? A VAL 44 O ? ? ? 1_555 E BA . BA ? ? A VAL 43 A BA 175 1_555 ? ? ? ? ? ? ? 2.888 ? metalc19 metalc ? ? A ASP 45 OD1 ? ? ? 1_555 E BA . BA ? ? A ASP 44 A BA 175 1_555 ? ? ? ? ? ? ? 2.887 ? metalc20 metalc ? ? I BA . BA ? ? ? 1_555 L HOH . O ? ? B BA 175 B HOH 228 1_555 ? ? ? ? ? ? ? 2.854 ? metalc21 metalc ? ? A ILE 42 O ? ? ? 1_555 E BA . BA ? ? A ILE 41 A BA 175 1_555 ? ? ? ? ? ? ? 2.894 ? metalc22 metalc ? ? B ASP 133 OD1 ? ? ? 1_555 I BA . BA ? ? B ASP 132 B BA 175 1_555 ? ? ? ? ? ? ? 2.868 ? covale1 covale ? ? A TYR 78 OH ? ? ? 1_555 F AMP . P ? ? A TYR 77 A AMP 600 1_555 ? ? ? ? ? ? ? 1.598 ? covale2 covale ? ? B TYR 78 OH ? ? ? 1_555 J AMP . P ? ? B TYR 77 B AMP 600 1_555 ? ? ? ? ? ? ? 1.566 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 44 ? LEU A 53 ? VAL A 43 LEU A 52 A 2 LYS A 56 ? THR A 65 ? LYS A 55 THR A 64 A 3 TYR A 8 ? GLY A 16 ? TYR A 7 GLY A 15 A 4 GLY A 84 ? ASP A 90 ? GLY A 83 ASP A 89 A 5 ASN A 116 ? ASN A 122 ? ASN A 115 ASN A 121 A 6 PHE A 148 ? GLU A 150 ? PHE A 147 GLU A 149 B 1 VAL B 44 ? LEU B 53 ? VAL B 43 LEU B 52 B 2 LYS B 56 ? THR B 65 ? LYS B 55 THR B 64 B 3 TYR B 8 ? GLY B 16 ? TYR B 7 GLY B 15 B 4 GLY B 84 ? ASP B 90 ? GLY B 83 ASP B 89 B 5 ASN B 116 ? ASN B 122 ? ASN B 115 ASN B 121 B 6 PHE B 148 ? THR B 151 ? PHE B 147 THR B 150 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 49 ? N ARG A 48 O LEU A 60 ? O LEU A 59 A 2 3 O LYS A 59 ? O LYS A 58 N TYR A 8 ? N TYR A 7 A 3 4 N LEU A 13 ? N LEU A 12 O ILE A 86 ? O ILE A 85 A 4 5 N TYR A 89 ? N TYR A 88 O ASN A 122 ? O ASN A 121 A 5 6 N LEU A 119 ? N LEU A 118 O LEU A 149 ? O LEU A 148 B 1 2 N ASP B 45 ? N ASP B 44 O ASP B 64 ? O ASP B 63 B 2 3 O TRP B 63 ? O TRP B 62 N LEU B 12 ? N LEU B 11 B 3 4 N LEU B 13 ? N LEU B 12 O ILE B 86 ? O ILE B 85 B 4 5 N TYR B 89 ? N TYR B 88 O ASN B 122 ? O ASN B 121 B 5 6 N GLY B 121 ? N GLY B 120 O THR B 151 ? O THR B 150 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 29 'BINDING SITE FOR RESIDUE GNP A 400' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE MG A 500' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE BA A 175' AC4 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE AMP A 600' AC5 Software ? ? ? ? 27 'BINDING SITE FOR RESIDUE GNP B 400' AC6 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE MG B 500' AC7 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE BA B 175' AC8 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE AMP B 600' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 29 SER A 18 ? SER A 17 . ? 1_555 ? 2 AC1 29 GLY A 19 ? GLY A 18 . ? 1_555 ? 3 AC1 29 VAL A 20 ? VAL A 19 . ? 1_555 ? 4 AC1 29 GLY A 21 ? GLY A 20 . ? 1_555 ? 5 AC1 29 LYS A 22 ? LYS A 21 . ? 1_555 ? 6 AC1 29 SER A 23 ? SER A 22 . ? 1_555 ? 7 AC1 29 CYS A 24 ? CYS A 23 . ? 1_555 ? 8 AC1 29 TYR A 34 ? TYR A 33 . ? 1_555 ? 9 AC1 29 THR A 35 ? THR A 34 . ? 1_555 ? 10 AC1 29 GLU A 36 ? GLU A 35 . ? 1_555 ? 11 AC1 29 SER A 37 ? SER A 36 . ? 1_555 ? 12 AC1 29 SER A 40 ? SER A 39 . ? 1_555 ? 13 AC1 29 THR A 41 ? THR A 40 . ? 1_555 ? 14 AC1 29 GLY A 67 ? GLY A 66 . ? 1_555 ? 15 AC1 29 ASN A 122 ? ASN A 121 . ? 1_555 ? 16 AC1 29 LYS A 123 ? LYS A 122 . ? 1_555 ? 17 AC1 29 ASP A 125 ? ASP A 124 . ? 1_555 ? 18 AC1 29 LEU A 126 ? LEU A 125 . ? 1_555 ? 19 AC1 29 SER A 152 ? SER A 151 . ? 1_555 ? 20 AC1 29 ALA A 153 ? ALA A 152 . ? 1_555 ? 21 AC1 29 LYS A 154 ? LYS A 153 . ? 1_555 ? 22 AC1 29 HOH K . ? HOH A 187 . ? 1_555 ? 23 AC1 29 HOH K . ? HOH A 189 . ? 1_555 ? 24 AC1 29 HOH K . ? HOH A 191 . ? 1_555 ? 25 AC1 29 HOH K . ? HOH A 208 . ? 1_555 ? 26 AC1 29 HOH K . ? HOH A 211 . ? 1_555 ? 27 AC1 29 HOH K . ? HOH A 218 . ? 1_555 ? 28 AC1 29 HOH K . ? HOH A 291 . ? 1_555 ? 29 AC1 29 MG D . ? MG A 500 . ? 1_555 ? 30 AC2 5 SER A 23 ? SER A 22 . ? 1_555 ? 31 AC2 5 THR A 41 ? THR A 40 . ? 1_555 ? 32 AC2 5 HOH K . ? HOH A 189 . ? 1_555 ? 33 AC2 5 HOH K . ? HOH A 218 . ? 1_555 ? 34 AC2 5 GNP C . ? GNP A 400 . ? 1_555 ? 35 AC3 4 ILE A 42 ? ILE A 41 . ? 1_555 ? 36 AC3 4 VAL A 44 ? VAL A 43 . ? 1_555 ? 37 AC3 4 ASP A 45 ? ASP A 44 . ? 1_555 ? 38 AC3 4 HOH K . ? HOH A 261 . ? 1_555 ? 39 AC4 6 VAL A 44 ? VAL A 43 . ? 1_555 ? 40 AC4 6 PHE A 46 ? PHE A 45 . ? 1_555 ? 41 AC4 6 GLN A 61 ? GLN A 60 . ? 1_555 ? 42 AC4 6 TRP A 63 ? TRP A 62 . ? 1_555 ? 43 AC4 6 TYR A 78 ? TYR A 77 . ? 1_555 ? 44 AC4 6 HOH K . ? HOH A 281 . ? 1_555 ? 45 AC5 27 SER B 18 ? SER B 17 . ? 1_555 ? 46 AC5 27 GLY B 19 ? GLY B 18 . ? 1_555 ? 47 AC5 27 VAL B 20 ? VAL B 19 . ? 1_555 ? 48 AC5 27 GLY B 21 ? GLY B 20 . ? 1_555 ? 49 AC5 27 LYS B 22 ? LYS B 21 . ? 1_555 ? 50 AC5 27 SER B 23 ? SER B 22 . ? 1_555 ? 51 AC5 27 CYS B 24 ? CYS B 23 . ? 1_555 ? 52 AC5 27 TYR B 34 ? TYR B 33 . ? 1_555 ? 53 AC5 27 GLU B 36 ? GLU B 35 . ? 1_555 ? 54 AC5 27 THR B 41 ? THR B 40 . ? 1_555 ? 55 AC5 27 GLY B 67 ? GLY B 66 . ? 1_555 ? 56 AC5 27 ASN B 122 ? ASN B 121 . ? 1_555 ? 57 AC5 27 LYS B 123 ? LYS B 122 . ? 1_555 ? 58 AC5 27 ASP B 125 ? ASP B 124 . ? 1_555 ? 59 AC5 27 LEU B 126 ? LEU B 125 . ? 1_555 ? 60 AC5 27 SER B 152 ? SER B 151 . ? 1_555 ? 61 AC5 27 ALA B 153 ? ALA B 152 . ? 1_555 ? 62 AC5 27 LYS B 154 ? LYS B 153 . ? 1_555 ? 63 AC5 27 HOH L . ? HOH B 181 . ? 1_555 ? 64 AC5 27 HOH L . ? HOH B 185 . ? 1_555 ? 65 AC5 27 HOH L . ? HOH B 199 . ? 1_555 ? 66 AC5 27 HOH L . ? HOH B 204 . ? 1_555 ? 67 AC5 27 HOH L . ? HOH B 212 . ? 1_555 ? 68 AC5 27 HOH L . ? HOH B 215 . ? 1_555 ? 69 AC5 27 HOH L . ? HOH B 227 . ? 1_555 ? 70 AC5 27 HOH L . ? HOH B 278 . ? 1_555 ? 71 AC5 27 MG H . ? MG B 500 . ? 1_555 ? 72 AC6 5 SER B 23 ? SER B 22 . ? 1_555 ? 73 AC6 5 THR B 41 ? THR B 40 . ? 1_555 ? 74 AC6 5 HOH L . ? HOH B 185 . ? 1_555 ? 75 AC6 5 HOH L . ? HOH B 199 . ? 1_555 ? 76 AC6 5 GNP G . ? GNP B 400 . ? 1_555 ? 77 AC7 8 GLU A 5 ? GLU A 4 . ? 1_454 ? 78 AC7 8 ASP A 7 ? ASP A 6 . ? 1_454 ? 79 AC7 8 THR A 57 ? THR A 56 . ? 1_454 ? 80 AC7 8 ASP B 133 ? ASP B 132 . ? 1_555 ? 81 AC7 8 THR B 135 ? THR B 134 . ? 1_555 ? 82 AC7 8 HOH L . ? HOH B 187 . ? 1_555 ? 83 AC7 8 HOH L . ? HOH B 228 . ? 1_555 ? 84 AC7 8 HOH L . ? HOH B 301 . ? 1_555 ? 85 AC8 6 PHE B 46 ? PHE B 45 . ? 1_555 ? 86 AC8 6 TRP B 63 ? TRP B 62 . ? 1_555 ? 87 AC8 6 TYR B 78 ? TYR B 77 . ? 1_555 ? 88 AC8 6 HOH L . ? HOH B 176 . ? 1_555 ? 89 AC8 6 HOH L . ? HOH B 216 . ? 1_555 ? 90 AC8 6 HOH L . ? HOH B 256 . ? 1_555 ? # _database_PDB_matrix.entry_id 3NKV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 3NKV _atom_sites.fract_transf_matrix[1][1] 0.028596 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006303 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009941 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022720 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BA C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 HIS 2 1 ? ? ? A . n A 1 3 MET 3 2 ? ? ? A . n A 1 4 PRO 4 3 ? ? ? A . n A 1 5 GLU 5 4 4 GLU GLU A . n A 1 6 TYR 6 5 5 TYR TYR A . n A 1 7 ASP 7 6 6 ASP ASP A . n A 1 8 TYR 8 7 7 TYR TYR A . n A 1 9 LEU 9 8 8 LEU LEU A . n A 1 10 PHE 10 9 9 PHE PHE A . n A 1 11 LYS 11 10 10 LYS LYS A . n A 1 12 LEU 12 11 11 LEU LEU A . n A 1 13 LEU 13 12 12 LEU LEU A . n A 1 14 LEU 14 13 13 LEU LEU A . n A 1 15 ILE 15 14 14 ILE ILE A . n A 1 16 GLY 16 15 15 GLY GLY A . n A 1 17 ASP 17 16 16 ASP ASP A . n A 1 18 SER 18 17 17 SER SER A . n A 1 19 GLY 19 18 18 GLY GLY A . n A 1 20 VAL 20 19 19 VAL VAL A . n A 1 21 GLY 21 20 20 GLY GLY A . n A 1 22 LYS 22 21 21 LYS LYS A . n A 1 23 SER 23 22 22 SER SER A . n A 1 24 CYS 24 23 23 CYS CYS A . n A 1 25 LEU 25 24 24 LEU LEU A . n A 1 26 LEU 26 25 25 LEU LEU A . n A 1 27 LEU 27 26 26 LEU LEU A . n A 1 28 ARG 28 27 27 ARG ARG A . n A 1 29 PHE 29 28 28 PHE PHE A . n A 1 30 ALA 30 29 29 ALA ALA A . n A 1 31 ASP 31 30 30 ASP ASP A . n A 1 32 ASP 32 31 31 ASP ASP A . n A 1 33 THR 33 32 32 THR THR A . n A 1 34 TYR 34 33 33 TYR TYR A . n A 1 35 THR 35 34 34 THR THR A . n A 1 36 GLU 36 35 35 GLU GLU A . n A 1 37 SER 37 36 36 SER SER A . n A 1 38 TYR 38 37 37 TYR TYR A . n A 1 39 ILE 39 38 38 ILE ILE A . n A 1 40 SER 40 39 39 SER SER A . n A 1 41 THR 41 40 40 THR THR A . n A 1 42 ILE 42 41 41 ILE ILE A . n A 1 43 GLY 43 42 42 GLY GLY A . n A 1 44 VAL 44 43 43 VAL VAL A . n A 1 45 ASP 45 44 44 ASP ASP A . n A 1 46 PHE 46 45 45 PHE PHE A . n A 1 47 LYS 47 46 46 LYS LYS A . n A 1 48 ILE 48 47 47 ILE ILE A . n A 1 49 ARG 49 48 48 ARG ARG A . n A 1 50 THR 50 49 49 THR THR A . n A 1 51 ILE 51 50 50 ILE ILE A . n A 1 52 GLU 52 51 51 GLU GLU A . n A 1 53 LEU 53 52 52 LEU LEU A . n A 1 54 ASP 54 53 53 ASP ASP A . n A 1 55 GLY 55 54 54 GLY GLY A . n A 1 56 LYS 56 55 55 LYS LYS A . n A 1 57 THR 57 56 56 THR THR A . n A 1 58 ILE 58 57 57 ILE ILE A . n A 1 59 LYS 59 58 58 LYS LYS A . n A 1 60 LEU 60 59 59 LEU LEU A . n A 1 61 GLN 61 60 60 GLN GLN A . n A 1 62 ILE 62 61 61 ILE ILE A . n A 1 63 TRP 63 62 62 TRP TRP A . n A 1 64 ASP 64 63 63 ASP ASP A . n A 1 65 THR 65 64 64 THR THR A . n A 1 66 ALA 66 65 65 ALA ALA A . n A 1 67 GLY 67 66 66 GLY GLY A . n A 1 68 GLN 68 67 67 GLN GLN A . n A 1 69 GLU 69 68 68 GLU GLU A . n A 1 70 ARG 70 69 69 ARG ARG A . n A 1 71 PHE 71 70 70 PHE PHE A . n A 1 72 ARG 72 71 71 ARG ARG A . n A 1 73 THR 73 72 72 THR THR A . n A 1 74 ILE 74 73 73 ILE ILE A . n A 1 75 THR 75 74 74 THR THR A . n A 1 76 SER 76 75 75 SER SER A . n A 1 77 SER 77 76 76 SER SER A . n A 1 78 TYR 78 77 77 TYR TYR A . n A 1 79 TYR 79 78 78 TYR TYR A . n A 1 80 ARG 80 79 79 ARG ARG A . n A 1 81 GLY 81 80 80 GLY GLY A . n A 1 82 ALA 82 81 81 ALA ALA A . n A 1 83 HIS 83 82 82 HIS HIS A . n A 1 84 GLY 84 83 83 GLY GLY A . n A 1 85 ILE 85 84 84 ILE ILE A . n A 1 86 ILE 86 85 85 ILE ILE A . n A 1 87 VAL 87 86 86 VAL VAL A . n A 1 88 VAL 88 87 87 VAL VAL A . n A 1 89 TYR 89 88 88 TYR TYR A . n A 1 90 ASP 90 89 89 ASP ASP A . n A 1 91 VAL 91 90 90 VAL VAL A . n A 1 92 THR 92 91 91 THR THR A . n A 1 93 ASP 93 92 92 ASP ASP A . n A 1 94 GLN 94 93 93 GLN GLN A . n A 1 95 GLU 95 94 94 GLU GLU A . n A 1 96 SER 96 95 95 SER SER A . n A 1 97 TYR 97 96 96 TYR TYR A . n A 1 98 ALA 98 97 97 ALA ALA A . n A 1 99 ASN 99 98 98 ASN ASN A . n A 1 100 VAL 100 99 99 VAL VAL A . n A 1 101 LYS 101 100 100 LYS LYS A . n A 1 102 GLN 102 101 101 GLN GLN A . n A 1 103 TRP 103 102 102 TRP TRP A . n A 1 104 LEU 104 103 103 LEU LEU A . n A 1 105 GLN 105 104 104 GLN GLN A . n A 1 106 GLU 106 105 105 GLU GLU A . n A 1 107 ILE 107 106 106 ILE ILE A . n A 1 108 ASP 108 107 107 ASP ASP A . n A 1 109 ARG 109 108 108 ARG ARG A . n A 1 110 TYR 110 109 109 TYR TYR A . n A 1 111 ALA 111 110 110 ALA ALA A . n A 1 112 SER 112 111 111 SER SER A . n A 1 113 GLU 113 112 112 GLU GLU A . n A 1 114 ASN 114 113 113 ASN ASN A . n A 1 115 VAL 115 114 114 VAL VAL A . n A 1 116 ASN 116 115 115 ASN ASN A . n A 1 117 LYS 117 116 116 LYS LYS A . n A 1 118 LEU 118 117 117 LEU LEU A . n A 1 119 LEU 119 118 118 LEU LEU A . n A 1 120 VAL 120 119 119 VAL VAL A . n A 1 121 GLY 121 120 120 GLY GLY A . n A 1 122 ASN 122 121 121 ASN ASN A . n A 1 123 LYS 123 122 122 LYS LYS A . n A 1 124 SER 124 123 123 SER SER A . n A 1 125 ASP 125 124 124 ASP ASP A . n A 1 126 LEU 126 125 125 LEU LEU A . n A 1 127 THR 127 126 126 THR THR A . n A 1 128 THR 128 127 127 THR THR A . n A 1 129 LYS 129 128 128 LYS LYS A . n A 1 130 LYS 130 129 129 LYS LYS A . n A 1 131 VAL 131 130 130 VAL VAL A . n A 1 132 VAL 132 131 131 VAL VAL A . n A 1 133 ASP 133 132 132 ASP ASP A . n A 1 134 ASN 134 133 133 ASN ASN A . n A 1 135 THR 135 134 134 THR THR A . n A 1 136 THR 136 135 135 THR THR A . n A 1 137 ALA 137 136 136 ALA ALA A . n A 1 138 LYS 138 137 137 LYS LYS A . n A 1 139 GLU 139 138 138 GLU GLU A . n A 1 140 PHE 140 139 139 PHE PHE A . n A 1 141 ALA 141 140 140 ALA ALA A . n A 1 142 ASP 142 141 141 ASP ASP A . n A 1 143 SER 143 142 142 SER SER A . n A 1 144 LEU 144 143 143 LEU LEU A . n A 1 145 GLY 145 144 144 GLY GLY A . n A 1 146 ILE 146 145 145 ILE ILE A . n A 1 147 PRO 147 146 146 PRO PRO A . n A 1 148 PHE 148 147 147 PHE PHE A . n A 1 149 LEU 149 148 148 LEU LEU A . n A 1 150 GLU 150 149 149 GLU GLU A . n A 1 151 THR 151 150 150 THR THR A . n A 1 152 SER 152 151 151 SER SER A . n A 1 153 ALA 153 152 152 ALA ALA A . n A 1 154 LYS 154 153 153 LYS LYS A . n A 1 155 ASN 155 154 154 ASN ASN A . n A 1 156 ALA 156 155 155 ALA ALA A . n A 1 157 THR 157 156 156 THR THR A . n A 1 158 ASN 158 157 157 ASN ASN A . n A 1 159 VAL 159 158 158 VAL VAL A . n A 1 160 GLU 160 159 159 GLU GLU A . n A 1 161 GLN 161 160 160 GLN GLN A . n A 1 162 ALA 162 161 161 ALA ALA A . n A 1 163 PHE 163 162 162 PHE PHE A . n A 1 164 MET 164 163 163 MET MET A . n A 1 165 THR 165 164 164 THR THR A . n A 1 166 MET 166 165 165 MET MET A . n A 1 167 ALA 167 166 166 ALA ALA A . n A 1 168 ALA 168 167 167 ALA ALA A . n A 1 169 GLU 169 168 168 GLU GLU A . n A 1 170 ILE 170 169 169 ILE ILE A . n A 1 171 LYS 171 170 170 LYS LYS A . n A 1 172 LYS 172 171 171 LYS LYS A . n A 1 173 ARG 173 172 172 ARG ARG A . n A 1 174 MET 174 173 173 MET MET A . n A 1 175 GLY 175 174 ? ? ? A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 HIS 2 1 ? ? ? B . n B 1 3 MET 3 2 ? ? ? B . n B 1 4 PRO 4 3 ? ? ? B . n B 1 5 GLU 5 4 4 GLU GLU B . n B 1 6 TYR 6 5 5 TYR TYR B . n B 1 7 ASP 7 6 6 ASP ASP B . n B 1 8 TYR 8 7 7 TYR TYR B . n B 1 9 LEU 9 8 8 LEU LEU B . n B 1 10 PHE 10 9 9 PHE PHE B . n B 1 11 LYS 11 10 10 LYS LYS B . n B 1 12 LEU 12 11 11 LEU LEU B . n B 1 13 LEU 13 12 12 LEU LEU B . n B 1 14 LEU 14 13 13 LEU LEU B . n B 1 15 ILE 15 14 14 ILE ILE B . n B 1 16 GLY 16 15 15 GLY GLY B . n B 1 17 ASP 17 16 16 ASP ASP B . n B 1 18 SER 18 17 17 SER SER B . n B 1 19 GLY 19 18 18 GLY GLY B . n B 1 20 VAL 20 19 19 VAL VAL B . n B 1 21 GLY 21 20 20 GLY GLY B . n B 1 22 LYS 22 21 21 LYS LYS B . n B 1 23 SER 23 22 22 SER SER B . n B 1 24 CYS 24 23 23 CYS CYS B . n B 1 25 LEU 25 24 24 LEU LEU B . n B 1 26 LEU 26 25 25 LEU LEU B . n B 1 27 LEU 27 26 26 LEU LEU B . n B 1 28 ARG 28 27 27 ARG ARG B . n B 1 29 PHE 29 28 28 PHE PHE B . n B 1 30 ALA 30 29 29 ALA ALA B . n B 1 31 ASP 31 30 30 ASP ASP B . n B 1 32 ASP 32 31 31 ASP ASP B . n B 1 33 THR 33 32 32 THR THR B . n B 1 34 TYR 34 33 33 TYR TYR B . n B 1 35 THR 35 34 34 THR THR B . n B 1 36 GLU 36 35 35 GLU GLU B . n B 1 37 SER 37 36 36 SER SER B . n B 1 38 TYR 38 37 37 TYR TYR B . n B 1 39 ILE 39 38 38 ILE ILE B . n B 1 40 SER 40 39 39 SER SER B . n B 1 41 THR 41 40 40 THR THR B . n B 1 42 ILE 42 41 41 ILE ILE B . n B 1 43 GLY 43 42 42 GLY GLY B . n B 1 44 VAL 44 43 43 VAL VAL B . n B 1 45 ASP 45 44 44 ASP ASP B . n B 1 46 PHE 46 45 45 PHE PHE B . n B 1 47 LYS 47 46 46 LYS LYS B . n B 1 48 ILE 48 47 47 ILE ILE B . n B 1 49 ARG 49 48 48 ARG ARG B . n B 1 50 THR 50 49 49 THR THR B . n B 1 51 ILE 51 50 50 ILE ILE B . n B 1 52 GLU 52 51 51 GLU GLU B . n B 1 53 LEU 53 52 52 LEU LEU B . n B 1 54 ASP 54 53 53 ASP ASP B . n B 1 55 GLY 55 54 54 GLY GLY B . n B 1 56 LYS 56 55 55 LYS LYS B . n B 1 57 THR 57 56 56 THR THR B . n B 1 58 ILE 58 57 57 ILE ILE B . n B 1 59 LYS 59 58 58 LYS LYS B . n B 1 60 LEU 60 59 59 LEU LEU B . n B 1 61 GLN 61 60 60 GLN GLN B . n B 1 62 ILE 62 61 61 ILE ILE B . n B 1 63 TRP 63 62 62 TRP TRP B . n B 1 64 ASP 64 63 63 ASP ASP B . n B 1 65 THR 65 64 64 THR THR B . n B 1 66 ALA 66 65 65 ALA ALA B . n B 1 67 GLY 67 66 66 GLY GLY B . n B 1 68 GLN 68 67 67 GLN GLN B . n B 1 69 GLU 69 68 68 GLU GLU B . n B 1 70 ARG 70 69 69 ARG ARG B . n B 1 71 PHE 71 70 70 PHE PHE B . n B 1 72 ARG 72 71 71 ARG ARG B . n B 1 73 THR 73 72 72 THR THR B . n B 1 74 ILE 74 73 73 ILE ILE B . n B 1 75 THR 75 74 74 THR THR B . n B 1 76 SER 76 75 75 SER SER B . n B 1 77 SER 77 76 76 SER SER B . n B 1 78 TYR 78 77 77 TYR TYR B . n B 1 79 TYR 79 78 78 TYR TYR B . n B 1 80 ARG 80 79 79 ARG ARG B . n B 1 81 GLY 81 80 80 GLY GLY B . n B 1 82 ALA 82 81 81 ALA ALA B . n B 1 83 HIS 83 82 82 HIS HIS B . n B 1 84 GLY 84 83 83 GLY GLY B . n B 1 85 ILE 85 84 84 ILE ILE B . n B 1 86 ILE 86 85 85 ILE ILE B . n B 1 87 VAL 87 86 86 VAL VAL B . n B 1 88 VAL 88 87 87 VAL VAL B . n B 1 89 TYR 89 88 88 TYR TYR B . n B 1 90 ASP 90 89 89 ASP ASP B . n B 1 91 VAL 91 90 90 VAL VAL B . n B 1 92 THR 92 91 91 THR THR B . n B 1 93 ASP 93 92 92 ASP ASP B . n B 1 94 GLN 94 93 93 GLN GLN B . n B 1 95 GLU 95 94 94 GLU GLU B . n B 1 96 SER 96 95 95 SER SER B . n B 1 97 TYR 97 96 96 TYR TYR B . n B 1 98 ALA 98 97 97 ALA ALA B . n B 1 99 ASN 99 98 98 ASN ASN B . n B 1 100 VAL 100 99 99 VAL VAL B . n B 1 101 LYS 101 100 100 LYS LYS B . n B 1 102 GLN 102 101 101 GLN GLN B . n B 1 103 TRP 103 102 102 TRP TRP B . n B 1 104 LEU 104 103 103 LEU LEU B . n B 1 105 GLN 105 104 104 GLN GLN B . n B 1 106 GLU 106 105 105 GLU GLU B . n B 1 107 ILE 107 106 106 ILE ILE B . n B 1 108 ASP 108 107 107 ASP ASP B . n B 1 109 ARG 109 108 108 ARG ARG B . n B 1 110 TYR 110 109 109 TYR TYR B . n B 1 111 ALA 111 110 110 ALA ALA B . n B 1 112 SER 112 111 111 SER SER B . n B 1 113 GLU 113 112 ? ? ? B . n B 1 114 ASN 114 113 113 ASN ASN B . n B 1 115 VAL 115 114 114 VAL VAL B . n B 1 116 ASN 116 115 115 ASN ASN B . n B 1 117 LYS 117 116 116 LYS LYS B . n B 1 118 LEU 118 117 117 LEU LEU B . n B 1 119 LEU 119 118 118 LEU LEU B . n B 1 120 VAL 120 119 119 VAL VAL B . n B 1 121 GLY 121 120 120 GLY GLY B . n B 1 122 ASN 122 121 121 ASN ASN B . n B 1 123 LYS 123 122 122 LYS LYS B . n B 1 124 SER 124 123 123 SER SER B . n B 1 125 ASP 125 124 124 ASP ASP B . n B 1 126 LEU 126 125 125 LEU LEU B . n B 1 127 THR 127 126 126 THR THR B . n B 1 128 THR 128 127 127 THR THR B . n B 1 129 LYS 129 128 128 LYS LYS B . n B 1 130 LYS 130 129 129 LYS LYS B . n B 1 131 VAL 131 130 130 VAL VAL B . n B 1 132 VAL 132 131 131 VAL VAL B . n B 1 133 ASP 133 132 132 ASP ASP B . n B 1 134 ASN 134 133 133 ASN ASN B . n B 1 135 THR 135 134 134 THR THR B . n B 1 136 THR 136 135 135 THR THR B . n B 1 137 ALA 137 136 136 ALA ALA B . n B 1 138 LYS 138 137 137 LYS LYS B . n B 1 139 GLU 139 138 138 GLU GLU B . n B 1 140 PHE 140 139 139 PHE PHE B . n B 1 141 ALA 141 140 140 ALA ALA B . n B 1 142 ASP 142 141 141 ASP ASP B . n B 1 143 SER 143 142 142 SER SER B . n B 1 144 LEU 144 143 143 LEU LEU B . n B 1 145 GLY 145 144 144 GLY GLY B . n B 1 146 ILE 146 145 145 ILE ILE B . n B 1 147 PRO 147 146 146 PRO PRO B . n B 1 148 PHE 148 147 147 PHE PHE B . n B 1 149 LEU 149 148 148 LEU LEU B . n B 1 150 GLU 150 149 149 GLU GLU B . n B 1 151 THR 151 150 150 THR THR B . n B 1 152 SER 152 151 151 SER SER B . n B 1 153 ALA 153 152 152 ALA ALA B . n B 1 154 LYS 154 153 153 LYS LYS B . n B 1 155 ASN 155 154 154 ASN ASN B . n B 1 156 ALA 156 155 155 ALA ALA B . n B 1 157 THR 157 156 156 THR THR B . n B 1 158 ASN 158 157 157 ASN ASN B . n B 1 159 VAL 159 158 158 VAL VAL B . n B 1 160 GLU 160 159 159 GLU GLU B . n B 1 161 GLN 161 160 160 GLN GLN B . n B 1 162 ALA 162 161 161 ALA ALA B . n B 1 163 PHE 163 162 162 PHE PHE B . n B 1 164 MET 164 163 163 MET MET B . n B 1 165 THR 165 164 164 THR THR B . n B 1 166 MET 166 165 165 MET MET B . n B 1 167 ALA 167 166 166 ALA ALA B . n B 1 168 ALA 168 167 167 ALA ALA B . n B 1 169 GLU 169 168 168 GLU GLU B . n B 1 170 ILE 170 169 169 ILE ILE B . n B 1 171 LYS 171 170 170 LYS LYS B . n B 1 172 LYS 172 171 171 LYS LYS B . n B 1 173 ARG 173 172 172 ARG ARG B . n B 1 174 MET 174 173 173 MET MET B . n B 1 175 GLY 175 174 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GNP 1 400 400 GNP GNP A . D 3 MG 1 500 500 MG MG A . E 4 BA 1 175 175 BA BA A . F 5 AMP 1 600 600 AMP AMP A . G 2 GNP 1 400 400 GNP GNP B . H 3 MG 1 500 500 MG MG B . I 4 BA 1 175 175 BA BA B . J 5 AMP 1 600 600 AMP AMP B . K 6 HOH 1 176 176 HOH HOH A . K 6 HOH 2 177 177 HOH HOH A . K 6 HOH 3 178 178 HOH HOH A . K 6 HOH 4 179 179 HOH HOH A . K 6 HOH 5 180 180 HOH HOH A . K 6 HOH 6 181 181 HOH HOH A . K 6 HOH 7 182 182 HOH HOH A . K 6 HOH 8 183 183 HOH HOH A . K 6 HOH 9 184 184 HOH HOH A . K 6 HOH 10 185 185 HOH HOH A . K 6 HOH 11 186 186 HOH HOH A . K 6 HOH 12 187 187 HOH HOH A . K 6 HOH 13 188 188 HOH HOH A . K 6 HOH 14 189 189 HOH HOH A . K 6 HOH 15 190 190 HOH HOH A . K 6 HOH 16 191 191 HOH HOH A . K 6 HOH 17 192 192 HOH HOH A . K 6 HOH 18 193 193 HOH HOH A . K 6 HOH 19 194 194 HOH HOH A . K 6 HOH 20 195 195 HOH HOH A . K 6 HOH 21 196 196 HOH HOH A . K 6 HOH 22 197 197 HOH HOH A . K 6 HOH 23 198 198 HOH HOH A . K 6 HOH 24 199 199 HOH HOH A . K 6 HOH 25 200 200 HOH HOH A . K 6 HOH 26 201 201 HOH HOH A . K 6 HOH 27 202 202 HOH HOH A . K 6 HOH 28 203 203 HOH HOH A . K 6 HOH 29 204 204 HOH HOH A . K 6 HOH 30 205 205 HOH HOH A . K 6 HOH 31 206 206 HOH HOH A . K 6 HOH 32 207 207 HOH HOH A . K 6 HOH 33 208 208 HOH HOH A . K 6 HOH 34 209 209 HOH HOH A . K 6 HOH 35 210 210 HOH HOH A . K 6 HOH 36 211 211 HOH HOH A . K 6 HOH 37 212 212 HOH HOH A . K 6 HOH 38 213 213 HOH HOH A . K 6 HOH 39 214 214 HOH HOH A . K 6 HOH 40 215 215 HOH HOH A . K 6 HOH 41 216 216 HOH HOH A . K 6 HOH 42 217 217 HOH HOH A . K 6 HOH 43 218 218 HOH HOH A . K 6 HOH 44 219 219 HOH HOH A . K 6 HOH 45 220 220 HOH HOH A . K 6 HOH 46 221 221 HOH HOH A . K 6 HOH 47 222 222 HOH HOH A . K 6 HOH 48 223 223 HOH HOH A . K 6 HOH 49 224 224 HOH HOH A . K 6 HOH 50 225 225 HOH HOH A . K 6 HOH 51 226 226 HOH HOH A . K 6 HOH 52 227 227 HOH HOH A . K 6 HOH 53 228 228 HOH HOH A . K 6 HOH 54 229 229 HOH HOH A . K 6 HOH 55 230 230 HOH HOH A . K 6 HOH 56 231 231 HOH HOH A . K 6 HOH 57 232 232 HOH HOH A . K 6 HOH 58 233 233 HOH HOH A . K 6 HOH 59 234 234 HOH HOH A . K 6 HOH 60 235 235 HOH HOH A . K 6 HOH 61 236 236 HOH HOH A . K 6 HOH 62 237 237 HOH HOH A . K 6 HOH 63 238 238 HOH HOH A . K 6 HOH 64 239 239 HOH HOH A . K 6 HOH 65 240 240 HOH HOH A . K 6 HOH 66 241 241 HOH HOH A . K 6 HOH 67 242 242 HOH HOH A . K 6 HOH 68 243 243 HOH HOH A . K 6 HOH 69 244 244 HOH HOH A . K 6 HOH 70 245 245 HOH HOH A . K 6 HOH 71 246 246 HOH HOH A . K 6 HOH 72 247 247 HOH HOH A . K 6 HOH 73 248 248 HOH HOH A . K 6 HOH 74 249 249 HOH HOH A . K 6 HOH 75 250 250 HOH HOH A . K 6 HOH 76 251 251 HOH HOH A . K 6 HOH 77 252 252 HOH HOH A . K 6 HOH 78 253 253 HOH HOH A . K 6 HOH 79 254 254 HOH HOH A . K 6 HOH 80 255 255 HOH HOH A . K 6 HOH 81 256 256 HOH HOH A . K 6 HOH 82 257 257 HOH HOH A . K 6 HOH 83 258 258 HOH HOH A . K 6 HOH 84 259 259 HOH HOH A . K 6 HOH 85 260 260 HOH HOH A . K 6 HOH 86 261 261 HOH HOH A . K 6 HOH 87 262 262 HOH HOH A . K 6 HOH 88 263 263 HOH HOH A . K 6 HOH 89 264 264 HOH HOH A . K 6 HOH 90 265 265 HOH HOH A . K 6 HOH 91 266 266 HOH HOH A . K 6 HOH 92 267 267 HOH HOH A . K 6 HOH 93 268 268 HOH HOH A . K 6 HOH 94 269 269 HOH HOH A . K 6 HOH 95 270 270 HOH HOH A . K 6 HOH 96 271 271 HOH HOH A . K 6 HOH 97 272 272 HOH HOH A . K 6 HOH 98 273 273 HOH HOH A . K 6 HOH 99 274 274 HOH HOH A . K 6 HOH 100 275 275 HOH HOH A . K 6 HOH 101 276 276 HOH HOH A . K 6 HOH 102 278 278 HOH HOH A . K 6 HOH 103 279 279 HOH HOH A . K 6 HOH 104 280 280 HOH HOH A . K 6 HOH 105 281 281 HOH HOH A . K 6 HOH 106 282 282 HOH HOH A . K 6 HOH 107 283 283 HOH HOH A . K 6 HOH 108 284 284 HOH HOH A . K 6 HOH 109 285 285 HOH HOH A . K 6 HOH 110 286 286 HOH HOH A . K 6 HOH 111 287 287 HOH HOH A . K 6 HOH 112 288 288 HOH HOH A . K 6 HOH 113 289 289 HOH HOH A . K 6 HOH 114 290 290 HOH HOH A . K 6 HOH 115 291 291 HOH HOH A . K 6 HOH 116 292 292 HOH HOH A . L 6 HOH 1 176 176 HOH HOH B . L 6 HOH 2 177 177 HOH HOH B . L 6 HOH 3 178 178 HOH HOH B . L 6 HOH 4 179 179 HOH HOH B . L 6 HOH 5 180 180 HOH HOH B . L 6 HOH 6 181 181 HOH HOH B . L 6 HOH 7 182 182 HOH HOH B . L 6 HOH 8 183 183 HOH HOH B . L 6 HOH 9 184 184 HOH HOH B . L 6 HOH 10 185 185 HOH HOH B . L 6 HOH 11 186 186 HOH HOH B . L 6 HOH 12 187 187 HOH HOH B . L 6 HOH 13 188 188 HOH HOH B . L 6 HOH 14 189 189 HOH HOH B . L 6 HOH 15 190 190 HOH HOH B . L 6 HOH 16 191 191 HOH HOH B . L 6 HOH 17 192 192 HOH HOH B . L 6 HOH 18 193 193 HOH HOH B . L 6 HOH 19 194 194 HOH HOH B . L 6 HOH 20 195 195 HOH HOH B . L 6 HOH 21 196 196 HOH HOH B . L 6 HOH 22 197 197 HOH HOH B . L 6 HOH 23 198 198 HOH HOH B . L 6 HOH 24 199 199 HOH HOH B . L 6 HOH 25 200 200 HOH HOH B . L 6 HOH 26 201 201 HOH HOH B . L 6 HOH 27 202 202 HOH HOH B . L 6 HOH 28 203 203 HOH HOH B . L 6 HOH 29 204 204 HOH HOH B . L 6 HOH 30 205 205 HOH HOH B . L 6 HOH 31 206 206 HOH HOH B . L 6 HOH 32 207 207 HOH HOH B . L 6 HOH 33 208 208 HOH HOH B . L 6 HOH 34 209 209 HOH HOH B . L 6 HOH 35 210 210 HOH HOH B . L 6 HOH 36 211 211 HOH HOH B . L 6 HOH 37 212 212 HOH HOH B . L 6 HOH 38 213 213 HOH HOH B . L 6 HOH 39 214 214 HOH HOH B . L 6 HOH 40 215 215 HOH HOH B . L 6 HOH 41 216 216 HOH HOH B . L 6 HOH 42 217 217 HOH HOH B . L 6 HOH 43 218 218 HOH HOH B . L 6 HOH 44 219 219 HOH HOH B . L 6 HOH 45 220 220 HOH HOH B . L 6 HOH 46 221 221 HOH HOH B . L 6 HOH 47 222 222 HOH HOH B . L 6 HOH 48 223 223 HOH HOH B . L 6 HOH 49 224 224 HOH HOH B . L 6 HOH 50 225 225 HOH HOH B . L 6 HOH 51 226 226 HOH HOH B . L 6 HOH 52 227 227 HOH HOH B . L 6 HOH 53 228 228 HOH HOH B . L 6 HOH 54 229 229 HOH HOH B . L 6 HOH 55 230 230 HOH HOH B . L 6 HOH 56 231 231 HOH HOH B . L 6 HOH 57 232 232 HOH HOH B . L 6 HOH 58 233 233 HOH HOH B . L 6 HOH 59 234 234 HOH HOH B . L 6 HOH 60 235 235 HOH HOH B . L 6 HOH 61 236 236 HOH HOH B . L 6 HOH 62 237 237 HOH HOH B . L 6 HOH 63 238 238 HOH HOH B . L 6 HOH 64 239 239 HOH HOH B . L 6 HOH 65 240 240 HOH HOH B . L 6 HOH 66 241 241 HOH HOH B . L 6 HOH 67 242 242 HOH HOH B . L 6 HOH 68 243 243 HOH HOH B . L 6 HOH 69 244 244 HOH HOH B . L 6 HOH 70 245 245 HOH HOH B . L 6 HOH 71 246 246 HOH HOH B . L 6 HOH 72 247 247 HOH HOH B . L 6 HOH 73 248 248 HOH HOH B . L 6 HOH 74 249 249 HOH HOH B . L 6 HOH 75 250 250 HOH HOH B . L 6 HOH 76 251 251 HOH HOH B . L 6 HOH 77 252 252 HOH HOH B . L 6 HOH 78 253 253 HOH HOH B . L 6 HOH 79 254 254 HOH HOH B . L 6 HOH 80 255 255 HOH HOH B . L 6 HOH 81 256 256 HOH HOH B . L 6 HOH 82 257 257 HOH HOH B . L 6 HOH 83 258 258 HOH HOH B . L 6 HOH 84 259 259 HOH HOH B . L 6 HOH 85 260 260 HOH HOH B . L 6 HOH 86 261 261 HOH HOH B . L 6 HOH 87 262 262 HOH HOH B . L 6 HOH 88 263 263 HOH HOH B . L 6 HOH 89 264 264 HOH HOH B . L 6 HOH 90 265 265 HOH HOH B . L 6 HOH 91 266 266 HOH HOH B . L 6 HOH 92 267 267 HOH HOH B . L 6 HOH 93 268 268 HOH HOH B . L 6 HOH 94 269 269 HOH HOH B . L 6 HOH 95 270 270 HOH HOH B . L 6 HOH 96 271 271 HOH HOH B . L 6 HOH 97 272 272 HOH HOH B . L 6 HOH 98 273 273 HOH HOH B . L 6 HOH 99 274 274 HOH HOH B . L 6 HOH 100 275 275 HOH HOH B . L 6 HOH 101 276 276 HOH HOH B . L 6 HOH 102 278 278 HOH HOH B . L 6 HOH 103 279 279 HOH HOH B . L 6 HOH 104 280 280 HOH HOH B . L 6 HOH 105 281 281 HOH HOH B . L 6 HOH 106 282 282 HOH HOH B . L 6 HOH 107 283 283 HOH HOH B . L 6 HOH 108 284 284 HOH HOH B . L 6 HOH 109 285 285 HOH HOH B . L 6 HOH 110 286 286 HOH HOH B . L 6 HOH 111 287 287 HOH HOH B . L 6 HOH 112 288 288 HOH HOH B . L 6 HOH 113 289 289 HOH HOH B . L 6 HOH 114 290 290 HOH HOH B . L 6 HOH 115 291 291 HOH HOH B . L 6 HOH 116 292 292 HOH HOH B . L 6 HOH 117 293 293 HOH HOH B . L 6 HOH 118 294 294 HOH HOH B . L 6 HOH 119 295 295 HOH HOH B . L 6 HOH 120 296 296 HOH HOH B . L 6 HOH 121 297 297 HOH HOH B . L 6 HOH 122 298 298 HOH HOH B . L 6 HOH 123 299 299 HOH HOH B . L 6 HOH 124 300 300 HOH HOH B . L 6 HOH 125 301 301 HOH HOH B . L 6 HOH 126 302 302 HOH HOH B . L 6 HOH 127 303 303 HOH HOH B . L 6 HOH 128 304 304 HOH HOH B . L 6 HOH 129 305 305 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,K 2 1 B,G,H,I,J,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O2G ? C GNP . ? A GNP 400 ? 1_555 MG ? D MG . ? A MG 500 ? 1_555 O2B ? C GNP . ? A GNP 400 ? 1_555 95.7 ? 2 O2G ? C GNP . ? A GNP 400 ? 1_555 MG ? D MG . ? A MG 500 ? 1_555 O ? K HOH . ? A HOH 218 ? 1_555 92.5 ? 3 O2B ? C GNP . ? A GNP 400 ? 1_555 MG ? D MG . ? A MG 500 ? 1_555 O ? K HOH . ? A HOH 218 ? 1_555 88.9 ? 4 O2G ? C GNP . ? A GNP 400 ? 1_555 MG ? D MG . ? A MG 500 ? 1_555 O ? K HOH . ? A HOH 189 ? 1_555 92.7 ? 5 O2B ? C GNP . ? A GNP 400 ? 1_555 MG ? D MG . ? A MG 500 ? 1_555 O ? K HOH . ? A HOH 189 ? 1_555 89.6 ? 6 O ? K HOH . ? A HOH 218 ? 1_555 MG ? D MG . ? A MG 500 ? 1_555 O ? K HOH . ? A HOH 189 ? 1_555 174.7 ? 7 O2G ? C GNP . ? A GNP 400 ? 1_555 MG ? D MG . ? A MG 500 ? 1_555 OG ? A SER 23 ? A SER 22 ? 1_555 172.3 ? 8 O2B ? C GNP . ? A GNP 400 ? 1_555 MG ? D MG . ? A MG 500 ? 1_555 OG ? A SER 23 ? A SER 22 ? 1_555 91.8 ? 9 O ? K HOH . ? A HOH 218 ? 1_555 MG ? D MG . ? A MG 500 ? 1_555 OG ? A SER 23 ? A SER 22 ? 1_555 85.9 ? 10 O ? K HOH . ? A HOH 189 ? 1_555 MG ? D MG . ? A MG 500 ? 1_555 OG ? A SER 23 ? A SER 22 ? 1_555 89.1 ? 11 O2G ? C GNP . ? A GNP 400 ? 1_555 MG ? D MG . ? A MG 500 ? 1_555 OG1 ? A THR 41 ? A THR 40 ? 1_555 89.8 ? 12 O2B ? C GNP . ? A GNP 400 ? 1_555 MG ? D MG . ? A MG 500 ? 1_555 OG1 ? A THR 41 ? A THR 40 ? 1_555 173.7 ? 13 O ? K HOH . ? A HOH 218 ? 1_555 MG ? D MG . ? A MG 500 ? 1_555 OG1 ? A THR 41 ? A THR 40 ? 1_555 88.0 ? 14 O ? K HOH . ? A HOH 189 ? 1_555 MG ? D MG . ? A MG 500 ? 1_555 OG1 ? A THR 41 ? A THR 40 ? 1_555 93.0 ? 15 OG ? A SER 23 ? A SER 22 ? 1_555 MG ? D MG . ? A MG 500 ? 1_555 OG1 ? A THR 41 ? A THR 40 ? 1_555 82.6 ? 16 OG ? B SER 23 ? B SER 22 ? 1_555 MG ? H MG . ? B MG 500 ? 1_555 O2G ? G GNP . ? B GNP 400 ? 1_555 174.1 ? 17 OG ? B SER 23 ? B SER 22 ? 1_555 MG ? H MG . ? B MG 500 ? 1_555 O ? L HOH . ? B HOH 185 ? 1_555 91.4 ? 18 O2G ? G GNP . ? B GNP 400 ? 1_555 MG ? H MG . ? B MG 500 ? 1_555 O ? L HOH . ? B HOH 185 ? 1_555 92.1 ? 19 OG ? B SER 23 ? B SER 22 ? 1_555 MG ? H MG . ? B MG 500 ? 1_555 O ? L HOH . ? B HOH 199 ? 1_555 88.2 ? 20 O2G ? G GNP . ? B GNP 400 ? 1_555 MG ? H MG . ? B MG 500 ? 1_555 O ? L HOH . ? B HOH 199 ? 1_555 88.7 ? 21 O ? L HOH . ? B HOH 185 ? 1_555 MG ? H MG . ? B MG 500 ? 1_555 O ? L HOH . ? B HOH 199 ? 1_555 175.3 ? 22 OG ? B SER 23 ? B SER 22 ? 1_555 MG ? H MG . ? B MG 500 ? 1_555 OG1 ? B THR 41 ? B THR 40 ? 1_555 82.5 ? 23 O2G ? G GNP . ? B GNP 400 ? 1_555 MG ? H MG . ? B MG 500 ? 1_555 OG1 ? B THR 41 ? B THR 40 ? 1_555 92.4 ? 24 O ? L HOH . ? B HOH 185 ? 1_555 MG ? H MG . ? B MG 500 ? 1_555 OG1 ? B THR 41 ? B THR 40 ? 1_555 93.2 ? 25 O ? L HOH . ? B HOH 199 ? 1_555 MG ? H MG . ? B MG 500 ? 1_555 OG1 ? B THR 41 ? B THR 40 ? 1_555 91.3 ? 26 OG ? B SER 23 ? B SER 22 ? 1_555 MG ? H MG . ? B MG 500 ? 1_555 O2B ? G GNP . ? B GNP 400 ? 1_555 89.7 ? 27 O2G ? G GNP . ? B GNP 400 ? 1_555 MG ? H MG . ? B MG 500 ? 1_555 O2B ? G GNP . ? B GNP 400 ? 1_555 95.4 ? 28 O ? L HOH . ? B HOH 185 ? 1_555 MG ? H MG . ? B MG 500 ? 1_555 O2B ? G GNP . ? B GNP 400 ? 1_555 86.5 ? 29 O ? L HOH . ? B HOH 199 ? 1_555 MG ? H MG . ? B MG 500 ? 1_555 O2B ? G GNP . ? B GNP 400 ? 1_555 88.9 ? 30 OG1 ? B THR 41 ? B THR 40 ? 1_555 MG ? H MG . ? B MG 500 ? 1_555 O2B ? G GNP . ? B GNP 400 ? 1_555 172.2 ? 31 O ? L HOH . ? B HOH 187 ? 1_555 BA ? I BA . ? B BA 175 ? 1_555 O ? L HOH . ? B HOH 301 ? 1_555 119.4 ? 32 O ? L HOH . ? B HOH 187 ? 1_555 BA ? I BA . ? B BA 175 ? 1_555 OG1 ? B THR 135 ? B THR 134 ? 1_555 66.5 ? 33 O ? L HOH . ? B HOH 301 ? 1_555 BA ? I BA . ? B BA 175 ? 1_555 OG1 ? B THR 135 ? B THR 134 ? 1_555 78.6 ? 34 O ? L HOH . ? B HOH 187 ? 1_555 BA ? I BA . ? B BA 175 ? 1_555 OD2 ? B ASP 133 ? B ASP 132 ? 1_555 126.5 ? 35 O ? L HOH . ? B HOH 301 ? 1_555 BA ? I BA . ? B BA 175 ? 1_555 OD2 ? B ASP 133 ? B ASP 132 ? 1_555 77.3 ? 36 OG1 ? B THR 135 ? B THR 134 ? 1_555 BA ? I BA . ? B BA 175 ? 1_555 OD2 ? B ASP 133 ? B ASP 132 ? 1_555 68.7 ? 37 O ? L HOH . ? B HOH 187 ? 1_555 BA ? I BA . ? B BA 175 ? 1_555 O ? L HOH . ? B HOH 228 ? 1_555 67.4 ? 38 O ? L HOH . ? B HOH 301 ? 1_555 BA ? I BA . ? B BA 175 ? 1_555 O ? L HOH . ? B HOH 228 ? 1_555 153.4 ? 39 OG1 ? B THR 135 ? B THR 134 ? 1_555 BA ? I BA . ? B BA 175 ? 1_555 O ? L HOH . ? B HOH 228 ? 1_555 81.8 ? 40 OD2 ? B ASP 133 ? B ASP 132 ? 1_555 BA ? I BA . ? B BA 175 ? 1_555 O ? L HOH . ? B HOH 228 ? 1_555 78.9 ? 41 O ? L HOH . ? B HOH 187 ? 1_555 BA ? I BA . ? B BA 175 ? 1_555 OD1 ? B ASP 133 ? B ASP 132 ? 1_555 162.0 ? 42 O ? L HOH . ? B HOH 301 ? 1_555 BA ? I BA . ? B BA 175 ? 1_555 OD1 ? B ASP 133 ? B ASP 132 ? 1_555 76.5 ? 43 OG1 ? B THR 135 ? B THR 134 ? 1_555 BA ? I BA . ? B BA 175 ? 1_555 OD1 ? B ASP 133 ? B ASP 132 ? 1_555 112.2 ? 44 OD2 ? B ASP 133 ? B ASP 132 ? 1_555 BA ? I BA . ? B BA 175 ? 1_555 OD1 ? B ASP 133 ? B ASP 132 ? 1_555 44.7 ? 45 O ? L HOH . ? B HOH 228 ? 1_555 BA ? I BA . ? B BA 175 ? 1_555 OD1 ? B ASP 133 ? B ASP 132 ? 1_555 94.6 ? 46 O ? K HOH . ? A HOH 261 ? 1_555 BA ? E BA . ? A BA 175 ? 1_555 O ? A VAL 44 ? A VAL 43 ? 1_555 70.9 ? 47 O ? K HOH . ? A HOH 261 ? 1_555 BA ? E BA . ? A BA 175 ? 1_555 OD1 ? A ASP 45 ? A ASP 44 ? 1_555 130.1 ? 48 O ? A VAL 44 ? A VAL 43 ? 1_555 BA ? E BA . ? A BA 175 ? 1_555 OD1 ? A ASP 45 ? A ASP 44 ? 1_555 63.8 ? 49 O ? K HOH . ? A HOH 261 ? 1_555 BA ? E BA . ? A BA 175 ? 1_555 O ? A ILE 42 ? A ILE 41 ? 1_555 81.4 ? 50 O ? A VAL 44 ? A VAL 43 ? 1_555 BA ? E BA . ? A BA 175 ? 1_555 O ? A ILE 42 ? A ILE 41 ? 1_555 98.8 ? 51 OD1 ? A ASP 45 ? A ASP 44 ? 1_555 BA ? E BA . ? A BA 175 ? 1_555 O ? A ILE 42 ? A ILE 41 ? 1_555 85.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-08-04 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category diffrn_detector # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 3 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_diffrn_detector.detector' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -3.2630 21.8830 -2.4050 0.0244 0.0458 0.0390 0.0050 0.0137 -0.0093 1.5080 1.0420 1.7764 0.4846 0.1943 0.4799 -0.1245 0.0693 -0.0242 0.0232 0.1130 -0.0052 0.0805 -0.0319 0.0115 'X-RAY DIFFRACTION' 2 ? refined -4.5870 -6.1690 -19.7160 0.0439 0.0275 0.0490 -0.0105 0.0084 0.0000 1.0081 0.8355 1.1973 -0.3233 0.0889 -0.1415 0.1129 0.0017 -0.1193 -0.1330 -0.0253 0.0239 -0.0245 0.0228 -0.0876 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A -10 ? ? A 9999 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B -10 ? ? B 9999 ? ? ? ? # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 1 REFMAC 5.5.0102 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 2 PDB_EXTRACT 3.004 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 3 XDS . ? ? ? ? 'data reduction' ? ? ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 180 ? ? O B HOH 226 ? ? 2.05 2 1 OH B TYR 77 ? ? "O5'" B AMP 600 ? ? 2.11 3 1 O B HOH 179 ? ? O B HOH 198 ? ? 2.13 4 1 CD B GLN 160 ? ? O B HOH 237 ? ? 2.17 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 16 ? ? CG A ASP 16 ? ? OD1 A ASP 16 ? ? 124.08 118.30 5.78 0.90 N 2 1 NE A ARG 69 ? ? CZ A ARG 69 ? ? NH2 A ARG 69 ? ? 116.94 120.30 -3.36 0.50 N 3 1 CG A MET 165 ? ? SD A MET 165 ? ? CE A MET 165 ? ? 76.05 100.20 -24.15 1.60 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA B 110 ? ? -112.15 -124.29 2 1 LYS B 122 ? ? 78.21 33.57 3 1 ALA B 155 ? ? 78.38 -2.82 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A HIS 1 ? A HIS 2 3 1 Y 1 A MET 2 ? A MET 3 4 1 Y 1 A PRO 3 ? A PRO 4 5 1 Y 1 A GLY 174 ? A GLY 175 6 1 Y 1 B GLY 0 ? B GLY 1 7 1 Y 1 B HIS 1 ? B HIS 2 8 1 Y 1 B MET 2 ? B MET 3 9 1 Y 1 B PRO 3 ? B PRO 4 10 1 Y 1 B GLU 112 ? B GLU 113 11 1 Y 1 B GLY 174 ? B GLY 175 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' GNP 3 'MAGNESIUM ION' MG 4 'BARIUM ION' BA 5 'ADENOSINE MONOPHOSPHATE' AMP 6 water HOH #