HEADER OXIDOREDUCTASE 23-JUN-10 3NN4 TITLE STRUCTURE OF CHLORITE DISMUTASE FROM CANDIDATUS NITROSPIRA DEFLUVII TITLE 2 R173K MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHLORITE DISMUTASE; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 EC: 1.13.11.49; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDATUS NITROSPIRA DEFLUVII; SOURCE 3 ORGANISM_TAXID: 330214; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PETM11 KEYWDS FERREDOXIN LIKE FOLD, CHLORITE DISMUTATION, PERIPLASMATIC, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.KOSTAN,B.SJOEBLOM,F.MAIXNER,G.MLYNEK,P.G.FURTMUELLER,C.OBINGER, AUTHOR 2 M.WAGNER,H.DAIMS,K.DJINOVIC-CARUGO REVDAT 5 03-APR-24 3NN4 1 REMARK REVDAT 4 27-DEC-23 3NN4 1 REMARK SEQADV LINK REVDAT 3 10-NOV-10 3NN4 1 JRNL REVDAT 2 04-AUG-10 3NN4 1 REMARK REVDAT 1 28-JUL-10 3NN4 0 JRNL AUTH J.KOSTAN,B.SJOEBLOM,F.MAIXNER,G.MLYNEK,P.G.FURTMUELLER, JRNL AUTH 2 C.OBINGER,M.WAGNER,H.DAIMS,K.DJINOVIC-CARUGO JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERISATION OF THE CHLORITE JRNL TITL 2 DISMUTASE FROM THE NITRITE-OXIDIZING BACTERIUM "CANDIDATUS JRNL TITL 3 NITROSPIRA DEFLUVII": IDENTIFICATION OF A CATALYTICALLY JRNL TITL 4 IMPORTANT AMINO ACID RESIDUE JRNL REF J.STRUCT.BIOL. V. 172 331 2010 JRNL REFN ISSN 1047-8477 JRNL PMID 20600954 JRNL DOI 10.1016/J.JSB.2010.06.014 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.72 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 42510 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2256 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3105 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.82 REMARK 3 BIN R VALUE (WORKING SET) : 0.3150 REMARK 3 BIN FREE R VALUE SET COUNT : 163 REMARK 3 BIN FREE R VALUE : 0.3770 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9585 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 320 REMARK 3 SOLVENT ATOMS : 195 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 77.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.30000 REMARK 3 B22 (A**2) : -2.13000 REMARK 3 B33 (A**2) : -5.48000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -8.42000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.346 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.310 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 29.372 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.922 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 10149 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 6830 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 13806 ; 1.325 ; 2.025 REMARK 3 BOND ANGLES OTHERS (DEGREES): 16530 ; 0.909 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1185 ; 5.568 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 470 ;29.342 ;23.404 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1720 ;18.062 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 70 ;19.801 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1445 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 11075 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2090 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2236 ; 0.211 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 6689 ; 0.191 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4612 ; 0.185 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 5369 ; 0.086 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 310 ; 0.175 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 3 ; 0.144 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 29 ; 0.254 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 24 ; 0.253 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 4 ; 0.400 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 7675 ; 0.457 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2420 ; 0.210 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 9485 ; 0.574 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 5042 ; 1.162 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4311 ; 1.694 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : C A B D E REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 C 1 C 238 2 REMARK 3 1 A 1 A 238 2 REMARK 3 1 B 1 B 238 2 REMARK 3 1 D 1 D 238 2 REMARK 3 1 E 1 E 238 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 C (A): 1402 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 A (A): 1402 ; 0.03 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 B (A): 1402 ; 0.04 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 D (A): 1402 ; 0.03 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 E (A): 1402 ; 0.04 ; 0.05 REMARK 3 MEDIUM POSITIONAL 1 C (A): 1863 ; 0.57 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 A (A): 1863 ; 0.52 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 B (A): 1863 ; 0.50 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 D (A): 1863 ; 0.52 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 E (A): 1863 ; 0.56 ; 0.50 REMARK 3 TIGHT THERMAL 1 C (A**2): 1402 ; 0.08 ; 0.50 REMARK 3 TIGHT THERMAL 1 A (A**2): 1402 ; 0.06 ; 0.50 REMARK 3 TIGHT THERMAL 1 B (A**2): 1402 ; 0.06 ; 0.50 REMARK 3 TIGHT THERMAL 1 D (A**2): 1402 ; 0.06 ; 0.50 REMARK 3 TIGHT THERMAL 1 E (A**2): 1402 ; 0.06 ; 0.50 REMARK 3 MEDIUM THERMAL 1 C (A**2): 1863 ; 0.41 ; 2.00 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1863 ; 0.33 ; 2.00 REMARK 3 MEDIUM THERMAL 1 B (A**2): 1863 ; 0.39 ; 2.00 REMARK 3 MEDIUM THERMAL 1 D (A**2): 1863 ; 0.38 ; 2.00 REMARK 3 MEDIUM THERMAL 1 E (A**2): 1863 ; 0.37 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 238 REMARK 3 ORIGIN FOR THE GROUP (A): -14.9720 23.4790 -27.5490 REMARK 3 T TENSOR REMARK 3 T11: 0.0782 T22: 0.1011 REMARK 3 T33: 0.2368 T12: 0.0878 REMARK 3 T13: -0.1112 T23: 0.0288 REMARK 3 L TENSOR REMARK 3 L11: 2.1585 L22: 2.2083 REMARK 3 L33: 3.3343 L12: 0.9937 REMARK 3 L13: 0.5527 L23: 0.7503 REMARK 3 S TENSOR REMARK 3 S11: -0.4110 S12: 0.0743 S13: 0.6119 REMARK 3 S21: -0.3024 S22: 0.0042 S23: 0.2816 REMARK 3 S31: -0.8736 S32: -0.1854 S33: 0.4068 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 238 REMARK 3 ORIGIN FOR THE GROUP (A): -16.6940 -23.0490 -27.0420 REMARK 3 T TENSOR REMARK 3 T11: 0.0999 T22: 0.0629 REMARK 3 T33: 0.0534 T12: -0.0269 REMARK 3 T13: 0.0539 T23: -0.1364 REMARK 3 L TENSOR REMARK 3 L11: 1.6946 L22: 1.3909 REMARK 3 L33: 4.8034 L12: -0.6604 REMARK 3 L13: 0.3661 L23: -0.1138 REMARK 3 S TENSOR REMARK 3 S11: 0.1851 S12: -0.0353 S13: -0.3427 REMARK 3 S21: -0.2906 S22: -0.1623 S23: 0.2363 REMARK 3 S31: 0.7274 S32: -0.4302 S33: -0.0228 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 238 REMARK 3 ORIGIN FOR THE GROUP (A): -31.5420 0.9720 -22.8230 REMARK 3 T TENSOR REMARK 3 T11: -0.1245 T22: 0.3567 REMARK 3 T33: 0.1226 T12: 0.0508 REMARK 3 T13: 0.0548 T23: -0.1154 REMARK 3 L TENSOR REMARK 3 L11: 1.0256 L22: 1.0588 REMARK 3 L33: 3.1868 L12: 0.2878 REMARK 3 L13: 1.1109 L23: -0.5605 REMARK 3 S TENSOR REMARK 3 S11: -0.0427 S12: -0.2346 S13: 0.1769 REMARK 3 S21: 0.0535 S22: 0.0151 S23: 0.4025 REMARK 3 S31: -0.0821 S32: -0.6893 S33: 0.0276 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 238 REMARK 3 ORIGIN FOR THE GROUP (A): 9.3770 -15.1690 -34.7420 REMARK 3 T TENSOR REMARK 3 T11: 0.1400 T22: 0.2105 REMARK 3 T33: 0.0359 T12: 0.2202 REMARK 3 T13: 0.2473 T23: 0.0399 REMARK 3 L TENSOR REMARK 3 L11: 1.3752 L22: 2.7310 REMARK 3 L33: 3.3826 L12: 0.6224 REMARK 3 L13: 1.0533 L23: -0.5520 REMARK 3 S TENSOR REMARK 3 S11: 0.0165 S12: 0.1788 S13: -0.2567 REMARK 3 S21: -0.7387 S22: -0.1903 S23: -0.3586 REMARK 3 S31: 0.3392 S32: 0.6011 S33: 0.1737 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 1 E 238 REMARK 3 ORIGIN FOR THE GROUP (A): 10.5250 13.3910 -35.1200 REMARK 3 T TENSOR REMARK 3 T11: 0.0276 T22: 0.2382 REMARK 3 T33: 0.0758 T12: -0.1326 REMARK 3 T13: 0.1167 T23: 0.2402 REMARK 3 L TENSOR REMARK 3 L11: 0.9825 L22: 2.4002 REMARK 3 L33: 3.6477 L12: -0.5371 REMARK 3 L13: 0.9423 L23: -0.5092 REMARK 3 S TENSOR REMARK 3 S11: -0.1072 S12: 0.1539 S13: 0.1695 REMARK 3 S21: -0.4055 S22: -0.2208 S23: -0.2411 REMARK 3 S31: -0.2002 S32: 0.7981 S33: 0.3280 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3NN4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1000060035. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : DIAMOND (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44825 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 106.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.77 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: IN-HOUSE MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4-0.6M AMMONIUM SULPHATE, 0.1M REMARK 280 CITRIC ACID, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K, PH REMARK 280 4 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 68.70500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 56.94000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 68.70500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 56.94000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 50380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 ALA A -1 REMARK 465 MET A 0 REMARK 465 GLY B -2 REMARK 465 ALA B -1 REMARK 465 MET B 0 REMARK 465 GLY C -2 REMARK 465 ALA C -1 REMARK 465 MET C 0 REMARK 465 GLY D -2 REMARK 465 ALA D -1 REMARK 465 MET D 0 REMARK 465 GLY E -2 REMARK 465 ALA E -1 REMARK 465 MET E 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 257 O HOH B 279 2.18 REMARK 500 N ARG D 131 O HOH D 264 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER A 130 OE2 GLU D 31 4454 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 59 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 128 77.57 -111.31 REMARK 500 ASP A 182 -156.11 -168.53 REMARK 500 SER B 128 78.30 -113.83 REMARK 500 ASP B 182 -161.47 -167.25 REMARK 500 SER C 128 79.59 -113.25 REMARK 500 ASP C 182 -153.54 -169.42 REMARK 500 SER D 128 75.99 -111.42 REMARK 500 ASP D 182 -157.66 -167.51 REMARK 500 SER E 128 77.28 -111.94 REMARK 500 ASP E 182 -155.50 -169.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 239 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 160 NE2 REMARK 620 2 HEM A 239 NA 93.9 REMARK 620 3 HEM A 239 NB 101.4 88.7 REMARK 620 4 HEM A 239 NC 93.9 171.7 92.4 REMARK 620 5 HEM A 239 ND 83.4 91.9 175.1 86.2 REMARK 620 6 HOH A 256 O 173.8 84.1 84.5 87.8 90.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 239 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 160 NE2 REMARK 620 2 HEM B 239 NA 89.2 REMARK 620 3 HEM B 239 NB 100.3 89.2 REMARK 620 4 HEM B 239 NC 99.4 171.4 89.0 REMARK 620 5 HEM B 239 ND 85.8 91.1 173.9 89.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM C 239 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 160 NE2 REMARK 620 2 HEM C 239 NA 93.5 REMARK 620 3 HEM C 239 NB 91.0 92.8 REMARK 620 4 HEM C 239 NC 91.0 173.3 82.1 REMARK 620 5 HEM C 239 ND 91.8 88.1 176.9 96.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM D 239 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 160 NE2 REMARK 620 2 HEM D 239 NA 82.4 REMARK 620 3 HEM D 239 NB 100.6 88.6 REMARK 620 4 HEM D 239 NC 99.7 177.7 90.1 REMARK 620 5 HEM D 239 ND 79.2 91.7 179.7 89.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM E 239 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS E 160 NE2 REMARK 620 2 HEM E 239 NA 96.1 REMARK 620 3 HEM E 239 NB 94.5 94.5 REMARK 620 4 HEM E 239 NC 90.5 173.1 87.2 REMARK 620 5 HEM E 239 ND 90.6 86.6 174.6 91.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 239 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 240 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 241 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 242 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 243 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM B 239 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 240 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 241 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 242 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 243 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM C 239 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 240 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 241 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 242 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 243 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 244 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM D 239 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 240 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 241 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM E 239 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 E 240 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 E 241 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 E 242 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 E 243 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 E 244 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 E 245 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3NN1 RELATED DB: PDB REMARK 900 SAME PROTEIN IN COMPLEX WITH IMIDAZOLE REMARK 900 RELATED ID: 3NN2 RELATED DB: PDB REMARK 900 SAME PROTEIN IN COMPLEX WITH CYANIDE REMARK 900 RELATED ID: 3NN3 RELATED DB: PDB REMARK 900 R173A MUTANT OF SAME PROTEIN DBREF 3NN4 A 1 238 UNP B3U4H7 B3U4H7_9BACT 27 264 DBREF 3NN4 B 1 238 UNP B3U4H7 B3U4H7_9BACT 27 264 DBREF 3NN4 C 1 238 UNP B3U4H7 B3U4H7_9BACT 27 264 DBREF 3NN4 D 1 238 UNP B3U4H7 B3U4H7_9BACT 27 264 DBREF 3NN4 E 1 238 UNP B3U4H7 B3U4H7_9BACT 27 264 SEQADV 3NN4 GLY A -2 UNP B3U4H7 CLONING ARTIFACT SEQADV 3NN4 ALA A -1 UNP B3U4H7 CLONING ARTIFACT SEQADV 3NN4 MET A 0 UNP B3U4H7 CLONING ARTIFACT SEQADV 3NN4 LYS A 173 UNP B3U4H7 ARG 199 ENGINEERED MUTATION SEQADV 3NN4 GLY B -2 UNP B3U4H7 CLONING ARTIFACT SEQADV 3NN4 ALA B -1 UNP B3U4H7 CLONING ARTIFACT SEQADV 3NN4 MET B 0 UNP B3U4H7 CLONING ARTIFACT SEQADV 3NN4 LYS B 173 UNP B3U4H7 ARG 199 ENGINEERED MUTATION SEQADV 3NN4 GLY C -2 UNP B3U4H7 CLONING ARTIFACT SEQADV 3NN4 ALA C -1 UNP B3U4H7 CLONING ARTIFACT SEQADV 3NN4 MET C 0 UNP B3U4H7 CLONING ARTIFACT SEQADV 3NN4 LYS C 173 UNP B3U4H7 ARG 199 ENGINEERED MUTATION SEQADV 3NN4 GLY D -2 UNP B3U4H7 CLONING ARTIFACT SEQADV 3NN4 ALA D -1 UNP B3U4H7 CLONING ARTIFACT SEQADV 3NN4 MET D 0 UNP B3U4H7 CLONING ARTIFACT SEQADV 3NN4 LYS D 173 UNP B3U4H7 ARG 199 ENGINEERED MUTATION SEQADV 3NN4 GLY E -2 UNP B3U4H7 CLONING ARTIFACT SEQADV 3NN4 ALA E -1 UNP B3U4H7 CLONING ARTIFACT SEQADV 3NN4 MET E 0 UNP B3U4H7 CLONING ARTIFACT SEQADV 3NN4 LYS E 173 UNP B3U4H7 ARG 199 ENGINEERED MUTATION SEQRES 1 A 241 GLY ALA MET ALA ASP ARG GLU LYS LEU LEU THR GLU SER SEQRES 2 A 241 GLY VAL TYR GLY THR PHE ALA THR PHE GLN MET ASP HIS SEQRES 3 A 241 ASP TRP TRP ASP LEU PRO GLY GLU SER ARG VAL ILE SER SEQRES 4 A 241 VAL ALA GLU VAL LYS GLY LEU VAL GLU GLN TRP SER GLY SEQRES 5 A 241 LYS ILE LEU VAL GLU SER TYR LEU LEU ARG GLY LEU SER SEQRES 6 A 241 ASP HIS ALA ASP LEU MET PHE ARG VAL HIS ALA ARG THR SEQRES 7 A 241 LEU SER ASP THR GLN GLN PHE LEU SER ALA PHE MET GLY SEQRES 8 A 241 THR ARG LEU GLY ARG HIS LEU THR SER GLY GLY LEU LEU SEQRES 9 A 241 HIS GLY VAL SER LYS LYS PRO THR TYR VAL ALA GLY PHE SEQRES 10 A 241 PRO GLU SER MET LYS THR GLU LEU GLN VAL ASN GLY GLU SEQRES 11 A 241 SER GLY SER ARG PRO TYR ALA ILE VAL ILE PRO ILE LYS SEQRES 12 A 241 LYS ASP ALA GLU TRP TRP ALA LEU ASP GLN GLU ALA ARG SEQRES 13 A 241 THR ALA LEU MET GLN GLU HIS THR GLN ALA ALA LEU PRO SEQRES 14 A 241 TYR LEU LYS THR VAL LYS LYS LYS LEU TYR HIS SER THR SEQRES 15 A 241 GLY LEU ASP ASP VAL ASP PHE ILE THR TYR PHE GLU THR SEQRES 16 A 241 GLU ARG LEU GLU ASP PHE HIS ASN LEU VAL ARG ALA LEU SEQRES 17 A 241 GLN GLN VAL LYS GLU PHE ARG HIS ASN ARG ARG PHE GLY SEQRES 18 A 241 HIS PRO THR LEU LEU GLY THR MET SER PRO LEU ASP GLU SEQRES 19 A 241 ILE LEU GLU LYS PHE ALA GLN SEQRES 1 B 241 GLY ALA MET ALA ASP ARG GLU LYS LEU LEU THR GLU SER SEQRES 2 B 241 GLY VAL TYR GLY THR PHE ALA THR PHE GLN MET ASP HIS SEQRES 3 B 241 ASP TRP TRP ASP LEU PRO GLY GLU SER ARG VAL ILE SER SEQRES 4 B 241 VAL ALA GLU VAL LYS GLY LEU VAL GLU GLN TRP SER GLY SEQRES 5 B 241 LYS ILE LEU VAL GLU SER TYR LEU LEU ARG GLY LEU SER SEQRES 6 B 241 ASP HIS ALA ASP LEU MET PHE ARG VAL HIS ALA ARG THR SEQRES 7 B 241 LEU SER ASP THR GLN GLN PHE LEU SER ALA PHE MET GLY SEQRES 8 B 241 THR ARG LEU GLY ARG HIS LEU THR SER GLY GLY LEU LEU SEQRES 9 B 241 HIS GLY VAL SER LYS LYS PRO THR TYR VAL ALA GLY PHE SEQRES 10 B 241 PRO GLU SER MET LYS THR GLU LEU GLN VAL ASN GLY GLU SEQRES 11 B 241 SER GLY SER ARG PRO TYR ALA ILE VAL ILE PRO ILE LYS SEQRES 12 B 241 LYS ASP ALA GLU TRP TRP ALA LEU ASP GLN GLU ALA ARG SEQRES 13 B 241 THR ALA LEU MET GLN GLU HIS THR GLN ALA ALA LEU PRO SEQRES 14 B 241 TYR LEU LYS THR VAL LYS LYS LYS LEU TYR HIS SER THR SEQRES 15 B 241 GLY LEU ASP ASP VAL ASP PHE ILE THR TYR PHE GLU THR SEQRES 16 B 241 GLU ARG LEU GLU ASP PHE HIS ASN LEU VAL ARG ALA LEU SEQRES 17 B 241 GLN GLN VAL LYS GLU PHE ARG HIS ASN ARG ARG PHE GLY SEQRES 18 B 241 HIS PRO THR LEU LEU GLY THR MET SER PRO LEU ASP GLU SEQRES 19 B 241 ILE LEU GLU LYS PHE ALA GLN SEQRES 1 C 241 GLY ALA MET ALA ASP ARG GLU LYS LEU LEU THR GLU SER SEQRES 2 C 241 GLY VAL TYR GLY THR PHE ALA THR PHE GLN MET ASP HIS SEQRES 3 C 241 ASP TRP TRP ASP LEU PRO GLY GLU SER ARG VAL ILE SER SEQRES 4 C 241 VAL ALA GLU VAL LYS GLY LEU VAL GLU GLN TRP SER GLY SEQRES 5 C 241 LYS ILE LEU VAL GLU SER TYR LEU LEU ARG GLY LEU SER SEQRES 6 C 241 ASP HIS ALA ASP LEU MET PHE ARG VAL HIS ALA ARG THR SEQRES 7 C 241 LEU SER ASP THR GLN GLN PHE LEU SER ALA PHE MET GLY SEQRES 8 C 241 THR ARG LEU GLY ARG HIS LEU THR SER GLY GLY LEU LEU SEQRES 9 C 241 HIS GLY VAL SER LYS LYS PRO THR TYR VAL ALA GLY PHE SEQRES 10 C 241 PRO GLU SER MET LYS THR GLU LEU GLN VAL ASN GLY GLU SEQRES 11 C 241 SER GLY SER ARG PRO TYR ALA ILE VAL ILE PRO ILE LYS SEQRES 12 C 241 LYS ASP ALA GLU TRP TRP ALA LEU ASP GLN GLU ALA ARG SEQRES 13 C 241 THR ALA LEU MET GLN GLU HIS THR GLN ALA ALA LEU PRO SEQRES 14 C 241 TYR LEU LYS THR VAL LYS LYS LYS LEU TYR HIS SER THR SEQRES 15 C 241 GLY LEU ASP ASP VAL ASP PHE ILE THR TYR PHE GLU THR SEQRES 16 C 241 GLU ARG LEU GLU ASP PHE HIS ASN LEU VAL ARG ALA LEU SEQRES 17 C 241 GLN GLN VAL LYS GLU PHE ARG HIS ASN ARG ARG PHE GLY SEQRES 18 C 241 HIS PRO THR LEU LEU GLY THR MET SER PRO LEU ASP GLU SEQRES 19 C 241 ILE LEU GLU LYS PHE ALA GLN SEQRES 1 D 241 GLY ALA MET ALA ASP ARG GLU LYS LEU LEU THR GLU SER SEQRES 2 D 241 GLY VAL TYR GLY THR PHE ALA THR PHE GLN MET ASP HIS SEQRES 3 D 241 ASP TRP TRP ASP LEU PRO GLY GLU SER ARG VAL ILE SER SEQRES 4 D 241 VAL ALA GLU VAL LYS GLY LEU VAL GLU GLN TRP SER GLY SEQRES 5 D 241 LYS ILE LEU VAL GLU SER TYR LEU LEU ARG GLY LEU SER SEQRES 6 D 241 ASP HIS ALA ASP LEU MET PHE ARG VAL HIS ALA ARG THR SEQRES 7 D 241 LEU SER ASP THR GLN GLN PHE LEU SER ALA PHE MET GLY SEQRES 8 D 241 THR ARG LEU GLY ARG HIS LEU THR SER GLY GLY LEU LEU SEQRES 9 D 241 HIS GLY VAL SER LYS LYS PRO THR TYR VAL ALA GLY PHE SEQRES 10 D 241 PRO GLU SER MET LYS THR GLU LEU GLN VAL ASN GLY GLU SEQRES 11 D 241 SER GLY SER ARG PRO TYR ALA ILE VAL ILE PRO ILE LYS SEQRES 12 D 241 LYS ASP ALA GLU TRP TRP ALA LEU ASP GLN GLU ALA ARG SEQRES 13 D 241 THR ALA LEU MET GLN GLU HIS THR GLN ALA ALA LEU PRO SEQRES 14 D 241 TYR LEU LYS THR VAL LYS LYS LYS LEU TYR HIS SER THR SEQRES 15 D 241 GLY LEU ASP ASP VAL ASP PHE ILE THR TYR PHE GLU THR SEQRES 16 D 241 GLU ARG LEU GLU ASP PHE HIS ASN LEU VAL ARG ALA LEU SEQRES 17 D 241 GLN GLN VAL LYS GLU PHE ARG HIS ASN ARG ARG PHE GLY SEQRES 18 D 241 HIS PRO THR LEU LEU GLY THR MET SER PRO LEU ASP GLU SEQRES 19 D 241 ILE LEU GLU LYS PHE ALA GLN SEQRES 1 E 241 GLY ALA MET ALA ASP ARG GLU LYS LEU LEU THR GLU SER SEQRES 2 E 241 GLY VAL TYR GLY THR PHE ALA THR PHE GLN MET ASP HIS SEQRES 3 E 241 ASP TRP TRP ASP LEU PRO GLY GLU SER ARG VAL ILE SER SEQRES 4 E 241 VAL ALA GLU VAL LYS GLY LEU VAL GLU GLN TRP SER GLY SEQRES 5 E 241 LYS ILE LEU VAL GLU SER TYR LEU LEU ARG GLY LEU SER SEQRES 6 E 241 ASP HIS ALA ASP LEU MET PHE ARG VAL HIS ALA ARG THR SEQRES 7 E 241 LEU SER ASP THR GLN GLN PHE LEU SER ALA PHE MET GLY SEQRES 8 E 241 THR ARG LEU GLY ARG HIS LEU THR SER GLY GLY LEU LEU SEQRES 9 E 241 HIS GLY VAL SER LYS LYS PRO THR TYR VAL ALA GLY PHE SEQRES 10 E 241 PRO GLU SER MET LYS THR GLU LEU GLN VAL ASN GLY GLU SEQRES 11 E 241 SER GLY SER ARG PRO TYR ALA ILE VAL ILE PRO ILE LYS SEQRES 12 E 241 LYS ASP ALA GLU TRP TRP ALA LEU ASP GLN GLU ALA ARG SEQRES 13 E 241 THR ALA LEU MET GLN GLU HIS THR GLN ALA ALA LEU PRO SEQRES 14 E 241 TYR LEU LYS THR VAL LYS LYS LYS LEU TYR HIS SER THR SEQRES 15 E 241 GLY LEU ASP ASP VAL ASP PHE ILE THR TYR PHE GLU THR SEQRES 16 E 241 GLU ARG LEU GLU ASP PHE HIS ASN LEU VAL ARG ALA LEU SEQRES 17 E 241 GLN GLN VAL LYS GLU PHE ARG HIS ASN ARG ARG PHE GLY SEQRES 18 E 241 HIS PRO THR LEU LEU GLY THR MET SER PRO LEU ASP GLU SEQRES 19 E 241 ILE LEU GLU LYS PHE ALA GLN HET HEM A 239 43 HET SO4 A 240 5 HET SO4 A 241 5 HET SO4 A 242 5 HET SO4 A 243 5 HET HEM B 239 43 HET SO4 B 240 5 HET SO4 B 241 5 HET SO4 B 242 5 HET SO4 B 243 5 HET HEM C 239 43 HET SO4 C 240 5 HET SO4 C 241 5 HET SO4 C 242 5 HET SO4 C 243 5 HET SO4 C 244 5 HET HEM D 239 43 HET SO4 D 240 5 HET SO4 D 241 5 HET HEM E 239 43 HET SO4 E 240 5 HET SO4 E 241 5 HET SO4 E 242 5 HET SO4 E 243 5 HET SO4 E 244 5 HET SO4 E 245 5 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM SO4 SULFATE ION HETSYN HEM HEME FORMUL 6 HEM 5(C34 H32 FE N4 O4) FORMUL 7 SO4 21(O4 S 2-) FORMUL 32 HOH *195(H2 O) HELIX 1 1 ALA A 1 GLU A 9 1 9 HELIX 2 2 HIS A 23 LEU A 28 5 6 HELIX 3 3 PRO A 29 SER A 48 1 20 HELIX 4 4 THR A 75 THR A 89 1 15 HELIX 5 5 LEU A 91 ARG A 93 5 3 HELIX 6 6 TYR A 110 PHE A 114 5 5 HELIX 7 7 PRO A 115 GLN A 123 1 9 HELIX 8 8 ASP A 142 LEU A 148 1 7 HELIX 9 9 ASP A 149 LEU A 165 1 17 HELIX 10 10 PRO A 166 LYS A 169 5 4 HELIX 11 11 ARG A 194 GLN A 206 1 13 HELIX 12 12 GLN A 207 ARG A 212 5 6 HELIX 13 13 PRO A 228 ALA A 237 1 10 HELIX 14 14 ALA B 1 GLU B 9 1 9 HELIX 15 15 HIS B 23 LEU B 28 5 6 HELIX 16 16 PRO B 29 SER B 48 1 20 HELIX 17 17 THR B 75 THR B 89 1 15 HELIX 18 18 LEU B 91 ARG B 93 5 3 HELIX 19 19 TYR B 110 PHE B 114 5 5 HELIX 20 20 PRO B 115 GLN B 123 1 9 HELIX 21 21 ASP B 142 LEU B 148 1 7 HELIX 22 22 ASP B 149 LEU B 165 1 17 HELIX 23 23 PRO B 166 LYS B 169 5 4 HELIX 24 24 ARG B 194 GLN B 206 1 13 HELIX 25 25 GLN B 207 ARG B 212 5 6 HELIX 26 26 PRO B 228 ALA B 237 1 10 HELIX 27 27 ALA C 1 GLU C 9 1 9 HELIX 28 28 HIS C 23 LEU C 28 5 6 HELIX 29 29 PRO C 29 TRP C 47 1 19 HELIX 30 30 SER C 48 LYS C 50 5 3 HELIX 31 31 THR C 75 THR C 89 1 15 HELIX 32 32 LEU C 91 ARG C 93 5 3 HELIX 33 33 TYR C 110 PHE C 114 5 5 HELIX 34 34 PRO C 115 VAL C 124 1 10 HELIX 35 35 ASP C 142 LEU C 148 1 7 HELIX 36 36 ASP C 149 LEU C 165 1 17 HELIX 37 37 PRO C 166 LYS C 169 5 4 HELIX 38 38 ARG C 194 GLN C 206 1 13 HELIX 39 39 GLN C 207 ARG C 212 5 6 HELIX 40 40 PRO C 228 ALA C 237 1 10 HELIX 41 41 ALA D 1 GLU D 9 1 9 HELIX 42 42 HIS D 23 LEU D 28 5 6 HELIX 43 43 PRO D 29 SER D 48 1 20 HELIX 44 44 THR D 75 THR D 89 1 15 HELIX 45 45 THR D 89 HIS D 94 1 6 HELIX 46 46 TYR D 110 PHE D 114 5 5 HELIX 47 47 PRO D 115 GLN D 123 1 9 HELIX 48 48 ASP D 142 LEU D 148 1 7 HELIX 49 49 ASP D 149 LEU D 165 1 17 HELIX 50 50 PRO D 166 LYS D 169 5 4 HELIX 51 51 ARG D 194 GLN D 206 1 13 HELIX 52 52 GLN D 207 ARG D 212 5 6 HELIX 53 53 PRO D 228 ALA D 237 1 10 HELIX 54 54 ALA E 1 GLU E 9 1 9 HELIX 55 55 HIS E 23 LEU E 28 5 6 HELIX 56 56 PRO E 29 SER E 48 1 20 HELIX 57 57 THR E 75 THR E 89 1 15 HELIX 58 58 THR E 89 HIS E 94 1 6 HELIX 59 59 TYR E 110 PHE E 114 5 5 HELIX 60 60 PRO E 115 GLN E 123 1 9 HELIX 61 61 ASP E 142 LEU E 148 1 7 HELIX 62 62 ASP E 149 LEU E 165 1 17 HELIX 63 63 PRO E 166 LYS E 169 5 4 HELIX 64 64 ARG E 194 GLN E 206 1 13 HELIX 65 65 GLN E 207 ARG E 212 5 6 HELIX 66 66 PRO E 228 ALA E 237 1 10 SHEET 1 A10 ASN A 214 PHE A 217 0 SHEET 2 A10 TYR A 133 LYS A 141 -1 N LYS A 140 O ARG A 216 SHEET 3 A10 LEU A 222 MET A 226 -1 O GLY A 224 N ALA A 134 SHEET 4 A10 LEU A 52 LEU A 57 -1 N LEU A 57 O THR A 225 SHEET 5 A10 LEU A 67 ALA A 73 -1 O HIS A 72 N LEU A 52 SHEET 6 A10 TYR A 13 MET A 21 -1 N PHE A 19 O LEU A 67 SHEET 7 A10 LEU A 95 VAL A 104 -1 O THR A 96 N GLN A 20 SHEET 8 A10 VAL A 171 HIS A 177 -1 O HIS A 177 N VAL A 104 SHEET 9 A10 PHE A 186 THR A 192 -1 O GLU A 191 N LYS A 172 SHEET 10 A10 TYR A 133 LYS A 141 -1 N TYR A 133 O THR A 192 SHEET 1 B10 ASN B 214 PHE B 217 0 SHEET 2 B10 TYR B 133 LYS B 141 -1 N LYS B 140 O ARG B 216 SHEET 3 B10 LEU B 222 MET B 226 -1 O GLY B 224 N ALA B 134 SHEET 4 B10 LEU B 52 LEU B 57 -1 N LEU B 57 O THR B 225 SHEET 5 B10 LEU B 67 ALA B 73 -1 O HIS B 72 N LEU B 52 SHEET 6 B10 TYR B 13 MET B 21 -1 N PHE B 19 O LEU B 67 SHEET 7 B10 LEU B 95 VAL B 104 -1 O THR B 96 N GLN B 20 SHEET 8 B10 VAL B 171 HIS B 177 -1 O HIS B 177 N VAL B 104 SHEET 9 B10 PHE B 186 THR B 192 -1 O GLU B 191 N LYS B 172 SHEET 10 B10 TYR B 133 LYS B 141 -1 N TYR B 133 O THR B 192 SHEET 1 C10 ASN C 214 PHE C 217 0 SHEET 2 C10 TYR C 133 LYS C 141 -1 N LYS C 140 O ARG C 216 SHEET 3 C10 LEU C 222 SER C 227 -1 O LEU C 222 N VAL C 136 SHEET 4 C10 LEU C 52 LEU C 57 -1 N LEU C 57 O THR C 225 SHEET 5 C10 LEU C 67 ALA C 73 -1 O HIS C 72 N LEU C 52 SHEET 6 C10 TYR C 13 MET C 21 -1 N PHE C 19 O LEU C 67 SHEET 7 C10 LEU C 95 VAL C 104 -1 O THR C 96 N GLN C 20 SHEET 8 C10 VAL C 171 HIS C 177 -1 O HIS C 177 N VAL C 104 SHEET 9 C10 PHE C 186 THR C 192 -1 O GLU C 191 N LYS C 172 SHEET 10 C10 TYR C 133 LYS C 141 -1 N TYR C 133 O THR C 192 SHEET 1 D10 ASN D 214 PHE D 217 0 SHEET 2 D10 TYR D 133 LYS D 141 -1 N LYS D 140 O ARG D 216 SHEET 3 D10 LEU D 222 MET D 226 -1 O GLY D 224 N ALA D 134 SHEET 4 D10 LEU D 52 LEU D 57 -1 N LEU D 57 O THR D 225 SHEET 5 D10 LEU D 67 ALA D 73 -1 O HIS D 72 N LEU D 52 SHEET 6 D10 TYR D 13 MET D 21 -1 N PHE D 19 O LEU D 67 SHEET 7 D10 LEU D 95 VAL D 104 -1 O THR D 96 N GLN D 20 SHEET 8 D10 VAL D 171 HIS D 177 -1 O HIS D 177 N VAL D 104 SHEET 9 D10 PHE D 186 THR D 192 -1 O GLU D 191 N LYS D 172 SHEET 10 D10 TYR D 133 LYS D 141 -1 N TYR D 133 O THR D 192 SHEET 1 E10 ASN E 214 PHE E 217 0 SHEET 2 E10 TYR E 133 LYS E 141 -1 N LYS E 140 O ARG E 216 SHEET 3 E10 LEU E 222 MET E 226 -1 O GLY E 224 N ALA E 134 SHEET 4 E10 LEU E 52 LEU E 57 -1 N LEU E 57 O THR E 225 SHEET 5 E10 LEU E 67 ALA E 73 -1 O HIS E 72 N LEU E 52 SHEET 6 E10 TYR E 13 MET E 21 -1 N PHE E 19 O LEU E 67 SHEET 7 E10 LEU E 95 VAL E 104 -1 O THR E 96 N GLN E 20 SHEET 8 E10 VAL E 171 HIS E 177 -1 O HIS E 177 N VAL E 104 SHEET 9 E10 PHE E 186 THR E 192 -1 O GLU E 191 N LYS E 172 SHEET 10 E10 TYR E 133 LYS E 141 -1 N ILE E 139 O PHE E 186 LINK NE2 HIS A 160 FE HEM A 239 1555 1555 2.15 LINK FE HEM A 239 O HOH A 256 1555 1555 2.73 LINK NE2 HIS B 160 FE HEM B 239 1555 1555 2.11 LINK NE2 HIS C 160 FE HEM C 239 1555 1555 2.16 LINK NE2 HIS D 160 FE HEM D 239 1555 1555 2.22 LINK NE2 HIS E 160 FE HEM E 239 1555 1555 2.20 CISPEP 1 HIS A 219 PRO A 220 0 0.65 CISPEP 2 HIS B 219 PRO B 220 0 -1.27 CISPEP 3 HIS C 219 PRO C 220 0 -0.66 CISPEP 4 HIS D 219 PRO D 220 0 1.13 CISPEP 5 HIS E 219 PRO E 220 0 2.87 SITE 1 AC1 20 PRO A 108 THR A 109 TYR A 110 VAL A 111 SITE 2 AC1 20 ILE A 137 ILE A 139 LYS A 141 TRP A 145 SITE 3 AC1 20 MET A 157 HIS A 160 THR A 161 ALA A 164 SITE 4 AC1 20 LEU A 168 LYS A 173 PHE A 186 THR A 188 SITE 5 AC1 20 PHE A 190 LEU A 205 GLU A 210 HOH A 256 SITE 1 AC2 4 LYS A 173 LYS A 174 LEU A 175 HOH A 250 SITE 1 AC3 4 LYS A 140 ARG A 215 ARG A 216 HIS C 219 SITE 1 AC4 5 LYS A 106 THR A 109 HIS A 177 HIS C 199 SITE 2 AC4 5 ARG C 203 SITE 1 AC5 4 ARG A 194 LEU A 195 GLU A 196 TYR E 13 SITE 1 AC6 19 PRO B 108 THR B 109 TYR B 110 VAL B 111 SITE 2 AC6 19 ILE B 137 LYS B 141 TRP B 145 MET B 157 SITE 3 AC6 19 HIS B 160 THR B 161 ALA B 164 LEU B 168 SITE 4 AC6 19 LYS B 173 PHE B 186 THR B 188 PHE B 190 SITE 5 AC6 19 LEU B 205 GLU B 210 HOH B 277 SITE 1 AC7 3 LYS B 173 LYS B 174 LEU B 175 SITE 1 AC8 5 LYS B 140 ARG B 215 ARG B 216 HOH B 254 SITE 2 AC8 5 HIS D 219 SITE 1 AC9 5 LYS B 106 THR B 109 HIS B 177 HIS D 199 SITE 2 AC9 5 ARG D 203 SITE 1 BC1 5 GLU B 193 ARG B 194 LEU B 195 GLU B 196 SITE 2 BC1 5 TYR C 13 SITE 1 BC2 20 PRO C 108 THR C 109 TYR C 110 VAL C 111 SITE 2 BC2 20 LEU C 122 ILE C 137 ILE C 139 LYS C 141 SITE 3 BC2 20 MET C 157 HIS C 160 THR C 161 ALA C 164 SITE 4 BC2 20 LEU C 168 LYS C 173 PHE C 186 PHE C 190 SITE 5 BC2 20 LEU C 201 LEU C 205 GLU C 210 HOH C 267 SITE 1 BC3 3 LYS C 173 LYS C 174 LEU C 175 SITE 1 BC4 3 HIS B 219 LYS C 140 ARG C 215 SITE 1 BC5 5 HIS B 199 ARG B 203 LYS C 106 THR C 109 SITE 2 BC5 5 HIS C 177 SITE 1 BC6 5 ASP B 27 ARG C 90 ARG C 93 HIS C 94 SITE 2 BC6 5 HOH C 266 SITE 1 BC7 5 TYR A 13 GLU C 193 ARG C 194 LEU C 195 SITE 2 BC7 5 GLU C 196 SITE 1 BC8 23 PRO D 108 THR D 109 TYR D 110 VAL D 111 SITE 2 BC8 23 LEU D 122 ILE D 139 LYS D 141 TRP D 145 SITE 3 BC8 23 MET D 157 HIS D 160 THR D 161 ALA D 164 SITE 4 BC8 23 LEU D 168 LYS D 173 LEU D 175 PHE D 186 SITE 5 BC8 23 THR D 188 PHE D 190 LEU D 201 LEU D 205 SITE 6 BC8 23 GLU D 210 PHE D 217 HOH D 253 SITE 1 BC9 3 LYS D 173 LYS D 174 LEU D 175 SITE 1 CC1 5 TYR B 13 GLU D 193 ARG D 194 LEU D 195 SITE 2 CC1 5 HOH D 281 SITE 1 CC2 18 PRO E 108 THR E 109 TYR E 110 VAL E 111 SITE 2 CC2 18 ILE E 139 LYS E 141 TRP E 145 MET E 157 SITE 3 CC2 18 HIS E 160 THR E 161 ALA E 164 LEU E 168 SITE 4 CC2 18 LYS E 173 PHE E 186 PHE E 190 LEU E 201 SITE 5 CC2 18 LEU E 205 GLU E 210 SITE 1 CC3 4 LYS E 173 LYS E 174 LEU E 175 HOH E 263 SITE 1 CC4 4 HIS A 219 LYS E 140 ARG E 215 ARG E 216 SITE 1 CC5 4 LYS D 140 ARG D 215 HIS E 219 HOH E 264 SITE 1 CC6 6 LYS D 106 THR D 109 HIS D 177 HIS E 199 SITE 2 CC6 6 ARG E 203 HOH E 270 SITE 1 CC7 5 HIS A 199 ARG A 203 LYS E 106 HIS E 177 SITE 2 CC7 5 HOH E 276 SITE 1 CC8 4 TYR D 13 ARG E 194 LEU E 195 GLU E 196 CRYST1 137.410 113.880 119.870 90.00 118.02 90.00 C 1 2 1 20 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007277 0.000000 0.003873 0.00000 SCALE2 0.000000 0.008781 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009450 0.00000