HEADER LYASE 23-JUN-10 3NNB TITLE CRYSTAL STRUCTURE OF AN ALGINATE LYASE (BACOVA_01668) FROM BACTEROIDES TITLE 2 OVATUS AT 1.60 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALGINATE LYASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES OVATUS; SOURCE 3 ORGANISM_TAXID: 411476; SOURCE 4 STRAIN: ATCC 8483; SOURCE 5 GENE: BACOVA_01668; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI-2, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 09-OCT-24 3NNB 1 REMARK REVDAT 4 01-FEB-23 3NNB 1 REMARK SEQADV LINK REVDAT 3 17-JUL-19 3NNB 1 REMARK LINK REVDAT 2 08-NOV-17 3NNB 1 REMARK REVDAT 1 06-OCT-10 3NNB 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF AN ALGINATE LYASE (BACOVA_01668) FROM JRNL TITL 2 BACTEROIDES OVATUS AT 1.60 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0110 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.14 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 60532 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.145 REMARK 3 R VALUE (WORKING SET) : 0.144 REMARK 3 FREE R VALUE : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3058 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4190 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.98 REMARK 3 BIN R VALUE (WORKING SET) : 0.2480 REMARK 3 BIN FREE R VALUE SET COUNT : 215 REMARK 3 BIN FREE R VALUE : 0.2830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3015 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 522 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.66 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.16000 REMARK 3 B22 (A**2) : -0.20000 REMARK 3 B33 (A**2) : 0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.072 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.045 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.307 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3256 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2292 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4425 ; 1.452 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5630 ; 0.933 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 418 ; 5.293 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 145 ;33.801 ;24.690 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 606 ;12.428 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;16.733 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 466 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3610 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 634 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1963 ; 1.532 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 783 ; 0.451 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3178 ; 2.462 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1293 ; 4.282 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1226 ; 6.388 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. CITRATE (CIT), SODIUM (NA) AND GLYCEROL (GOL) REMARK 3 MODELED ARE PRESENT IN CRYSTALLIZATION/CRYO CONDITIONS. 3. REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 4 REMARK 4 3NNB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000060041. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97870 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.15 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60601 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 29.137 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.12600 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.600000000M NACITRATE, NO BUFFER PH REMARK 280 6.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.28850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.68800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.08300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.68800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.28850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.08300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 20 N CA CB CG CD OE1 NE2 REMARK 470 GLU A 30 CD OE1 OE2 REMARK 470 ARG A 53 CZ NH1 NH2 REMARK 470 GLN A 323 CG CD OE1 NE2 REMARK 470 LYS A 374 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LYS A 69 NZ LYS A 78 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 114 -152.53 -102.37 REMARK 500 ASN A 238 -157.21 -114.99 REMARK 500 THR A 291 62.05 -113.84 REMARK 500 PRO A 347 32.90 -87.80 REMARK 500 GLN A 350 88.08 -159.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 401 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 200 O REMARK 620 2 SER A 202 O 102.5 REMARK 620 3 PHE A 205 O 86.8 101.0 REMARK 620 4 HOH A 438 O 173.1 83.9 89.5 REMARK 620 5 HOH A 533 O 95.0 88.0 170.2 87.7 REMARK 620 6 HOH A 583 O 84.8 165.1 92.2 89.5 78.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 416788 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (RESIDUES 20-400) WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3NNB A 20 400 UNP A7LV19 A7LV19_BACOV 20 400 SEQADV 3NNB GLY A 0 UNP A7LV19 EXPRESSION TAG SEQRES 1 A 382 GLY GLN VAL ALA ASN THR ARG ILE TYR ALA ALA GLU LYS SEQRES 2 A 382 LEU ALA LYS VAL LYS GLU LYS ALA ASP SER PRO LEU TYR SEQRES 3 A 382 ALA PRO ALA VAL LYS THR LEU LEU ARG ASP ALA ASP LYS SEQRES 4 A 382 ALA LEU LYS MSE THR PRO PRO SER VAL MSE ASP LYS THR SEQRES 5 A 382 MSE THR ALA ASP SER GLY ASP LYS HIS ASP TYR MSE SER SEQRES 6 A 382 MSE GLY PRO TYR TRP TRP PRO ASP PRO SER LYS PRO ASP SEQRES 7 A 382 GLY LEU PRO TYR ILE ARG LYS ASP GLY GLN ARG ASN PRO SEQRES 8 A 382 GLU LEU ASP LYS LEU ASP ARG ASN LYS LEU GLY ASP MSE SEQRES 9 A 382 SER LYS ALA VAL THR THR LEU GLY LEU ALA TYR TYR PHE SEQRES 10 A 382 SER GLY ASP GLU LYS TYR ALA GLN LYS ALA VAL ASP PHE SEQRES 11 A 382 LEU ASN VAL TRP PHE LEU ASP ALA LYS THR LYS MSE ASN SEQRES 12 A 382 PRO HIS LEU THR TYR GLY GLN THR ILE PRO GLY LYS ASN SEQRES 13 A 382 LYS GLY MSE GLY ARG GLY ALA GLY MSE ILE ASP ILE TYR SEQRES 14 A 382 SER PHE THR GLU MSE ILE ASP ALA MSE THR LEU MSE GLU SEQRES 15 A 382 ASN SER LYS ALA PHE THR PRO LYS VAL LYS LYS GLY MSE SEQRES 16 A 382 LYS GLU TRP PHE THR GLN LEU VAL GLU TRP MSE GLN THR SEQRES 17 A 382 SER PRO VAL ALA ALA GLU GLU GLN ARG ALA LYS ASN ASN SEQRES 18 A 382 HIS GLY LEU ALA TYR ASP VAL GLN LEU THR ALA TYR ALA SEQRES 19 A 382 LEU TYR THR GLY ASN GLN ASP LEU ALA MSE LYS THR ILE SEQRES 20 A 382 GLN GLU PHE PRO GLU LYS ARG LEU PHE ALA GLN ILE GLU SEQRES 21 A 382 PRO ASP GLY LYS GLN PRO LEU GLU LEU ALA ARG THR THR SEQRES 22 A 382 ALA LEU GLY TYR THR ILE PHE ASN LEU GLY HIS MSE LEU SEQRES 23 A 382 ASP MSE CYS SER ILE ALA SER THR LEU GLY GLN ASP ILE SEQRES 24 A 382 TYR ASN ALA THR SER GLN ASP GLY ARG SER ILE THR ALA SEQRES 25 A 382 ALA LEU LYS PHE LEU ILE PRO TYR ILE GLY LYS PRO GLN SEQRES 26 A 382 SER GLU TRP PRO TYR GLN GLN ILE LYS GLU TRP ASP LYS SEQRES 27 A 382 LYS GLN GLU GLU ALA CYS TRP ILE LEU ARG ARG ALA SER SEQRES 28 A 382 PHE PHE ASP PRO LYS ALA GLY TYR GLU ALA ILE GLY ALA SEQRES 29 A 382 GLN PHE ARG GLU THR PRO ALA ASN LYS ARG ILE HIS LEU SEQRES 30 A 382 ILE TYR SER LEU GLU MODRES 3NNB MSE A 61 MET SELENOMETHIONINE MODRES 3NNB MSE A 67 MET SELENOMETHIONINE MODRES 3NNB MSE A 71 MET SELENOMETHIONINE MODRES 3NNB MSE A 82 MET SELENOMETHIONINE MODRES 3NNB MSE A 84 MET SELENOMETHIONINE MODRES 3NNB MSE A 122 MET SELENOMETHIONINE MODRES 3NNB MSE A 160 MET SELENOMETHIONINE MODRES 3NNB MSE A 177 MET SELENOMETHIONINE MODRES 3NNB MSE A 183 MET SELENOMETHIONINE MODRES 3NNB MSE A 192 MET SELENOMETHIONINE MODRES 3NNB MSE A 196 MET SELENOMETHIONINE MODRES 3NNB MSE A 199 MET SELENOMETHIONINE MODRES 3NNB MSE A 213 MET SELENOMETHIONINE MODRES 3NNB MSE A 224 MET SELENOMETHIONINE MODRES 3NNB MSE A 262 MET SELENOMETHIONINE MODRES 3NNB MSE A 303 MET SELENOMETHIONINE MODRES 3NNB MSE A 306 MET SELENOMETHIONINE HET MSE A 61 13 HET MSE A 67 8 HET MSE A 71 8 HET MSE A 82 8 HET MSE A 84 8 HET MSE A 122 8 HET MSE A 160 8 HET MSE A 177 13 HET MSE A 183 13 HET MSE A 192 8 HET MSE A 196 8 HET MSE A 199 8 HET MSE A 213 8 HET MSE A 224 8 HET MSE A 262 13 HET MSE A 303 8 HET MSE A 306 8 HET NA A 401 1 HET CIT A 402 13 HET GOL A 403 6 HET GOL A 404 6 HETNAM MSE SELENOMETHIONINE HETNAM NA SODIUM ION HETNAM CIT CITRIC ACID HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 17(C5 H11 N O2 SE) FORMUL 2 NA NA 1+ FORMUL 3 CIT C6 H8 O7 FORMUL 4 GOL 2(C3 H8 O3) FORMUL 6 HOH *522(H2 O) HELIX 1 1 ALA A 28 LYS A 38 1 11 HELIX 2 2 TYR A 44 LYS A 60 1 17 HELIX 3 3 ASN A 108 LEU A 114 5 7 HELIX 4 4 ASP A 115 GLY A 137 1 23 HELIX 5 5 ASP A 138 LEU A 154 1 17 HELIX 6 6 LYS A 173 MSE A 177 5 5 HELIX 7 7 ARG A 179 TYR A 187 5 9 HELIX 8 8 SER A 188 MSE A 199 1 12 HELIX 9 9 THR A 206 SER A 227 1 22 HELIX 10 10 SER A 227 ARG A 235 1 9 HELIX 11 11 ASN A 238 THR A 255 1 18 HELIX 12 12 ASN A 257 ARG A 272 1 16 HELIX 13 13 ARG A 272 ILE A 277 1 6 HELIX 14 14 GLN A 283 ALA A 288 1 6 HELIX 15 15 THR A 291 THR A 312 1 22 HELIX 16 16 SER A 327 ILE A 336 1 10 HELIX 17 17 PRO A 337 ILE A 339 5 3 HELIX 18 18 PRO A 342 TRP A 346 5 5 HELIX 19 19 GLU A 353 PHE A 370 1 18 HELIX 20 20 PHE A 371 ALA A 375 5 5 HELIX 21 21 GLY A 376 ARG A 385 1 10 HELIX 22 22 ARG A 392 TYR A 397 1 6 SHEET 1 A 2 MSE A 82 MSE A 84 0 SHEET 2 A 2 TYR A 166 THR A 169 1 O THR A 169 N SER A 83 SHEET 1 B 2 TRP A 88 TRP A 89 0 SHEET 2 B 2 ILE A 101 ARG A 102 -1 O ILE A 101 N TRP A 89 LINK C LYS A 60 N MSE A 61 1555 1555 1.33 LINK C MSE A 61 N THR A 62 1555 1555 1.34 LINK C VAL A 66 N MSE A 67 1555 1555 1.32 LINK C MSE A 67 N ASP A 68 1555 1555 1.33 LINK C THR A 70 N MSE A 71 1555 1555 1.34 LINK C MSE A 71 N THR A 72 1555 1555 1.32 LINK C TYR A 81 N MSE A 82 1555 1555 1.32 LINK C MSE A 82 N SER A 83 1555 1555 1.33 LINK C SER A 83 N MSE A 84 1555 1555 1.33 LINK C MSE A 84 N GLY A 85 1555 1555 1.33 LINK C ASP A 121 N MSE A 122 1555 1555 1.34 LINK C MSE A 122 N SER A 123 1555 1555 1.33 LINK C LYS A 159 N MSE A 160 1555 1555 1.32 LINK C MSE A 160 N ASN A 161 1555 1555 1.33 LINK C GLY A 176 N MSE A 177 1555 1555 1.32 LINK C MSE A 177 N GLY A 178 1555 1555 1.33 LINK C GLY A 182 N MSE A 183 1555 1555 1.33 LINK C MSE A 183 N ILE A 184 1555 1555 1.33 LINK C GLU A 191 N MSE A 192 1555 1555 1.34 LINK C MSE A 192 N ILE A 193 1555 1555 1.33 LINK C ALA A 195 N MSE A 196 1555 1555 1.34 LINK C MSE A 196 N THR A 197 1555 1555 1.33 LINK C LEU A 198 N MSE A 199 1555 1555 1.33 LINK C MSE A 199 N GLU A 200 1555 1555 1.32 LINK C GLY A 212 N MSE A 213 1555 1555 1.33 LINK C MSE A 213 N LYS A 214 1555 1555 1.33 LINK C TRP A 223 N MSE A 224 1555 1555 1.34 LINK C MSE A 224 N GLN A 225 1555 1555 1.32 LINK C ALA A 261 N MSE A 262 1555 1555 1.35 LINK C MSE A 262 N LYS A 263 1555 1555 1.32 LINK C HIS A 302 N MSE A 303 1555 1555 1.33 LINK C MSE A 303 N LEU A 304 1555 1555 1.32 LINK C ASP A 305 N MSE A 306 1555 1555 1.34 LINK C MSE A 306 N CYS A 307 1555 1555 1.33 LINK O GLU A 200 NA NA A 401 1555 1555 2.40 LINK O SER A 202 NA NA A 401 1555 1555 2.27 LINK O PHE A 205 NA NA A 401 1555 1555 2.41 LINK NA NA A 401 O HOH A 438 1555 1555 2.46 LINK NA NA A 401 O HOH A 533 1555 1555 2.40 LINK NA NA A 401 O HOH A 583 1555 1555 2.52 CISPEP 1 LEU A 98 PRO A 99 0 0.66 SITE 1 AC1 6 GLU A 200 SER A 202 PHE A 205 HOH A 438 SITE 2 AC1 6 HOH A 533 HOH A 583 SITE 1 AC2 13 TYR A 87 TRP A 88 ARG A 102 ARG A 179 SITE 2 AC2 13 ASN A 238 HIS A 240 ARG A 289 TYR A 295 SITE 3 AC2 13 HOH A 427 HOH A 510 HOH A 563 HOH A 585 SITE 4 AC2 13 HOH A 743 SITE 1 AC3 7 ARG A 107 THR A 291 GLY A 294 TYR A 295 SITE 2 AC3 7 PHE A 298 HOH A 444 HOH A 824 SITE 1 AC4 3 SER A 311 HOH A 549 HOH A 870 CRYST1 54.577 80.166 103.376 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018323 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012474 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009673 0.00000 CONECT 302 309 CONECT 309 302 310 311 CONECT 310 309 312 314 CONECT 311 309 312 315 CONECT 312 310 311 313 322 CONECT 313 312 CONECT 314 310 316 CONECT 315 311 317 CONECT 316 314 318 CONECT 317 315 319 CONECT 318 316 320 CONECT 319 317 321 CONECT 320 318 CONECT 321 319 CONECT 322 312 CONECT 351 356 CONECT 356 351 357 CONECT 357 356 358 360 CONECT 358 357 359 364 CONECT 359 358 CONECT 360 357 361 CONECT 361 360 362 CONECT 362 361 363 CONECT 363 362 CONECT 364 358 CONECT 383 388 CONECT 388 383 389 CONECT 389 388 390 392 CONECT 390 389 391 396 CONECT 391 390 CONECT 392 389 393 CONECT 393 392 394 CONECT 394 393 395 CONECT 395 394 CONECT 396 390 CONECT 469 479 CONECT 479 469 480 CONECT 480 479 481 483 CONECT 481 480 482 487 CONECT 482 481 CONECT 483 480 484 CONECT 484 483 485 CONECT 485 484 486 CONECT 486 485 CONECT 487 481 CONECT 489 493 CONECT 493 489 494 CONECT 494 493 495 497 CONECT 495 494 496 501 CONECT 496 495 CONECT 497 494 498 CONECT 498 497 499 CONECT 499 498 500 CONECT 500 499 CONECT 501 495 CONECT 815 821 CONECT 821 815 822 CONECT 822 821 823 825 CONECT 823 822 824 829 CONECT 824 823 CONECT 825 822 826 CONECT 826 825 827 CONECT 827 826 828 CONECT 828 827 CONECT 829 823 CONECT 1119 1126 CONECT 1126 1119 1127 CONECT 1127 1126 1128 1130 CONECT 1128 1127 1129 1134 CONECT 1129 1128 CONECT 1130 1127 1131 CONECT 1131 1130 1132 CONECT 1132 1131 1133 CONECT 1133 1132 CONECT 1134 1128 CONECT 1253 1255 CONECT 1255 1253 1256 1257 CONECT 1256 1255 1258 1260 CONECT 1257 1255 1258 1261 CONECT 1258 1256 1257 1259 1268 CONECT 1259 1258 CONECT 1260 1256 1262 CONECT 1261 1257 1263 CONECT 1262 1260 1264 CONECT 1263 1261 1265 CONECT 1264 1262 1266 CONECT 1265 1263 1267 CONECT 1266 1264 CONECT 1267 1265 CONECT 1268 1258 CONECT 1294 1296 CONECT 1296 1294 1297 1298 CONECT 1297 1296 1299 1301 CONECT 1298 1296 1299 1302 CONECT 1299 1297 1298 1300 1309 CONECT 1300 1299 CONECT 1301 1297 1303 CONECT 1302 1298 1304 CONECT 1303 1301 1305 CONECT 1304 1302 1306 CONECT 1305 1303 1307 CONECT 1306 1304 1308 CONECT 1307 1305 CONECT 1308 1306 CONECT 1309 1299 CONECT 1371 1378 CONECT 1378 1371 1379 CONECT 1379 1378 1380 1382 CONECT 1380 1379 1381 1386 CONECT 1381 1380 CONECT 1382 1379 1383 CONECT 1383 1382 1384 CONECT 1384 1383 1385 CONECT 1385 1384 CONECT 1386 1380 CONECT 1404 1407 CONECT 1407 1404 1408 CONECT 1408 1407 1409 1411 CONECT 1409 1408 1410 1415 CONECT 1410 1409 CONECT 1411 1408 1412 CONECT 1412 1411 1413 CONECT 1413 1412 1414 CONECT 1414 1413 CONECT 1415 1409 CONECT 1424 1430 CONECT 1430 1424 1431 CONECT 1431 1430 1432 1434 CONECT 1432 1431 1433 1438 CONECT 1433 1432 CONECT 1434 1431 1435 CONECT 1435 1434 1436 CONECT 1436 1435 1437 CONECT 1437 1436 CONECT 1438 1432 CONECT 1441 3141 CONECT 1463 3141 CONECT 1483 3141 CONECT 1541 1543 CONECT 1543 1541 1544 CONECT 1544 1543 1545 1547 CONECT 1545 1544 1546 1551 CONECT 1546 1545 CONECT 1547 1544 1548 CONECT 1548 1547 1549 CONECT 1549 1548 1550 CONECT 1550 1549 CONECT 1551 1545 CONECT 1648 1660 CONECT 1660 1648 1661 CONECT 1661 1660 1662 1664 CONECT 1662 1661 1663 1668 CONECT 1663 1662 CONECT 1664 1661 1665 CONECT 1665 1664 1666 CONECT 1666 1665 1667 CONECT 1667 1666 CONECT 1668 1662 CONECT 1974 1977 CONECT 1977 1974 1978 1979 CONECT 1978 1977 1980 1982 CONECT 1979 1977 1980 1983 CONECT 1980 1978 1979 1981 1990 CONECT 1981 1980 CONECT 1982 1978 1984 CONECT 1983 1979 1985 CONECT 1984 1982 1986 CONECT 1985 1983 1987 CONECT 1986 1984 1988 CONECT 1987 1985 1989 CONECT 1988 1986 CONECT 1989 1987 CONECT 1990 1980 CONECT 2317 2325 CONECT 2325 2317 2326 CONECT 2326 2325 2327 2329 CONECT 2327 2326 2328 2333 CONECT 2328 2327 CONECT 2329 2326 2330 CONECT 2330 2329 2331 CONECT 2331 2330 2332 CONECT 2332 2331 CONECT 2333 2327 CONECT 2343 2349 CONECT 2349 2343 2350 CONECT 2350 2349 2351 2353 CONECT 2351 2350 2352 2357 CONECT 2352 2351 CONECT 2353 2350 2354 CONECT 2354 2353 2355 CONECT 2355 2354 2356 CONECT 2356 2355 CONECT 2357 2351 CONECT 3141 1441 1463 1483 3200 CONECT 3141 3295 3346 CONECT 3142 3143 3144 3145 CONECT 3143 3142 CONECT 3144 3142 CONECT 3145 3142 3146 CONECT 3146 3145 3147 3148 3152 CONECT 3147 3146 CONECT 3148 3146 3149 CONECT 3149 3148 3150 3151 CONECT 3150 3149 CONECT 3151 3149 CONECT 3152 3146 3153 3154 CONECT 3153 3152 CONECT 3154 3152 CONECT 3155 3156 3157 CONECT 3156 3155 CONECT 3157 3155 3158 3159 CONECT 3158 3157 CONECT 3159 3157 3160 CONECT 3160 3159 CONECT 3161 3162 3163 CONECT 3162 3161 CONECT 3163 3161 3164 3165 CONECT 3164 3163 CONECT 3165 3163 3166 CONECT 3166 3165 CONECT 3200 3141 CONECT 3295 3141 CONECT 3346 3141 MASTER 334 0 21 22 4 0 9 6 3563 1 223 30 END