HEADER VIRAL PROTEIN 24-JUN-10 3NNQ TITLE CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF MOLONEY MURINE LEUKEMIA TITLE 2 VIRUS INTEGRASE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET OR3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: N-TERMINAL DOMAIN OF MOLONEY MURINE LEUKEMIA VIRUS COMPND 3 INTEGRASE; COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: N-TERMINAL DOMAIN; COMPND 6 SYNONYM: INTEGRASE P46; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MOLONEY MURINE LEUKEMIA VIRUS; SOURCE 3 ORGANISM_COMMON: MOMLV; SOURCE 4 ORGANISM_TAXID: 11801; SOURCE 5 GENE: GAG-POL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21 KEYWDS RETROVIRAL INTEGRASE, ZN FINGER, MOLONEY MURINE LEUKEMIA VIRUS, KEYWDS 2 STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, NORTHEAST KEYWDS 3 STRUCTURAL GENOMICS CONSORTIUM, NESG, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.GUAN,R.XIAO,T.ACTON,M.JIANG,M.ROTH,G.T.MONTELIONE,NORTHEAST AUTHOR 2 STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 6 26-JUL-23 3NNQ 1 JRNL REMARK LINK REVDAT 5 08-NOV-17 3NNQ 1 REMARK REVDAT 4 22-FEB-17 3NNQ 1 JRNL VERSN REVDAT 3 04-AUG-10 3NNQ 1 AUTHOR REVDAT 2 28-JUL-10 3NNQ 1 AUTHOR REMARK TITLE REVDAT 1 14-JUL-10 3NNQ 0 JRNL AUTH R.GUAN,S.AIYER,M.L.COTE,R.XIAO,M.JIANG,T.B.ACTON,M.J.ROTH, JRNL AUTH 2 G.T.MONTELIONE JRNL TITL X-RAY CRYSTAL STRUCTURE OF THE N-TERMINAL REGION OF MOLONEY JRNL TITL 2 MURINE LEUKEMIA VIRUS INTEGRASE AND ITS IMPLICATIONS FOR JRNL TITL 3 VIRAL DNA RECOGNITION. JRNL REF PROTEINS V. 85 647 2017 JRNL REFN ESSN 1097-0134 JRNL PMID 28066922 JRNL DOI 10.1002/PROT.25245 REMARK 2 REMARK 2 RESOLUTION. 2.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_403 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.72 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 7829 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.234 REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 783 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.7323 - 4.8930 0.98 1236 137 0.2178 0.2383 REMARK 3 2 4.8930 - 3.8842 1.00 1201 134 0.1916 0.2630 REMARK 3 3 3.8842 - 3.3933 0.99 1183 131 0.2213 0.2720 REMARK 3 4 3.3933 - 3.0831 1.00 1187 132 0.2740 0.3201 REMARK 3 5 3.0831 - 2.8622 0.99 1172 131 0.2872 0.3442 REMARK 3 6 2.8622 - 2.6934 0.90 1067 118 0.3091 0.3573 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.40 REMARK 3 SHRINKAGE RADIUS : 0.04 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 88.87 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.420 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 74.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 94.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.76650 REMARK 3 B22 (A**2) : -3.76650 REMARK 3 B33 (A**2) : 7.53290 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 1628 REMARK 3 ANGLE : 0.674 2194 REMARK 3 CHIRALITY : 0.048 240 REMARK 3 PLANARITY : 0.002 268 REMARK 3 DIHEDRAL : 13.741 598 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): -31.1161 -20.6544 23.5604 REMARK 3 T TENSOR REMARK 3 T11: 0.1463 T22: 0.6774 REMARK 3 T33: 0.4821 T12: 0.0896 REMARK 3 T13: 0.1260 T23: -0.4002 REMARK 3 L TENSOR REMARK 3 L11: 0.3048 L22: 0.5822 REMARK 3 L33: 0.3986 L12: 0.1310 REMARK 3 L13: -0.0972 L23: -0.3563 REMARK 3 S TENSOR REMARK 3 S11: 0.3150 S12: -0.4332 S13: 0.7309 REMARK 3 S21: 0.2706 S22: 0.3043 S23: -0.2965 REMARK 3 S31: -0.3942 S32: -0.0563 S33: 0.2568 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 0.7430 -34.6497 6.9312 REMARK 3 T TENSOR REMARK 3 T11: 0.3102 T22: 0.9028 REMARK 3 T33: 0.6654 T12: 0.0220 REMARK 3 T13: 0.1384 T23: -0.4470 REMARK 3 L TENSOR REMARK 3 L11: 0.3001 L22: 0.7879 REMARK 3 L33: 0.3207 L12: 0.1759 REMARK 3 L13: -0.1967 L23: -0.4916 REMARK 3 S TENSOR REMARK 3 S11: 0.2510 S12: 0.7394 S13: -0.1844 REMARK 3 S21: -0.3199 S22: -0.3588 S23: -0.7932 REMARK 3 S31: 0.1152 S32: -0.3588 S33: -0.0209 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 12:104 ) REMARK 3 SELECTION : CHAIN B AND (RESSEQ 12:104 ) REMARK 3 ATOM PAIRS NUMBER : 772 REMARK 3 RMSD : 0.015 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3NNQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JUN-10. REMARK 100 THE DEPOSITION ID IS D_1000060056. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97917, 0.97940, 0.96863 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 2.693 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 10.20 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 44.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.60 REMARK 200 R MERGE FOR SHELL (I) : 0.88600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.430 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M SODIUM MALONATE, 0.1 M SODIUM REMARK 280 ACETATE,0.05% ANAPOE X-305, PH 5.0, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 56.40900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 32.56775 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 38.50933 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 56.40900 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 32.56775 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 38.50933 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 56.40900 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 32.56775 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 38.50933 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 56.40900 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 32.56775 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 38.50933 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 56.40900 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 32.56775 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 38.50933 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 56.40900 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 32.56775 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 38.50933 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 65.13550 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 77.01867 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 65.13550 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 77.01867 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 65.13550 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 77.01867 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 65.13550 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 77.01867 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 65.13550 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 77.01867 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 65.13550 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 77.01867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE BIOLOGICAL UNIT IS A DIMER, NOT A REMARK 300 TETRAMER. THE DIMER IN THE ASYMMETRIC UNIT MAY NOT BE THE REAL REMARK 300 DIMER IN SOLUTION, HOWEVER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -65.13550 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 38.50933 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 136 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 ILE A 2 REMARK 465 GLU A 3 REMARK 465 ASN A 4 REMARK 465 SER A 5 REMARK 465 SER A 6 REMARK 465 PRO A 7 REMARK 465 TYR A 8 REMARK 465 THR A 9 REMARK 465 SER A 10 REMARK 465 GLU A 11 REMARK 465 LEU A 107 REMARK 465 GLU A 108 REMARK 465 HIS A 109 REMARK 465 HIS A 110 REMARK 465 HIS A 111 REMARK 465 HIS A 112 REMARK 465 HIS A 113 REMARK 465 HIS A 114 REMARK 465 MSE B 1 REMARK 465 ILE B 2 REMARK 465 GLU B 3 REMARK 465 ASN B 4 REMARK 465 SER B 5 REMARK 465 SER B 6 REMARK 465 PRO B 7 REMARK 465 TYR B 8 REMARK 465 THR B 9 REMARK 465 SER B 10 REMARK 465 GLU B 11 REMARK 465 LEU B 107 REMARK 465 GLU B 108 REMARK 465 HIS B 109 REMARK 465 HIS B 110 REMARK 465 HIS B 111 REMARK 465 HIS B 112 REMARK 465 HIS B 113 REMARK 465 HIS B 114 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 35 -7.89 81.86 REMARK 500 PRO A 46 166.09 -48.26 REMARK 500 LYS B 35 -8.07 82.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 58 NE2 REMARK 620 2 HIS A 62 ND1 114.5 REMARK 620 3 CYS A 95 SG 100.3 98.7 REMARK 620 4 CYS A 98 SG 94.8 132.7 112.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 58 NE2 REMARK 620 2 HIS B 62 ND1 111.6 REMARK 620 3 CYS B 95 SG 97.1 96.5 REMARK 620 4 CYS B 98 SG 95.1 136.7 113.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 115 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 115 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: OR3 RELATED DB: TARGETDB DBREF 3NNQ A 2 106 UNP P03355 POL_MLVMO 1331 1435 DBREF 3NNQ B 2 106 UNP P03355 POL_MLVMO 1331 1435 SEQADV 3NNQ MSE A 1 UNP P03355 EXPRESSION TAG SEQADV 3NNQ LEU A 107 UNP P03355 EXPRESSION TAG SEQADV 3NNQ GLU A 108 UNP P03355 EXPRESSION TAG SEQADV 3NNQ HIS A 109 UNP P03355 EXPRESSION TAG SEQADV 3NNQ HIS A 110 UNP P03355 EXPRESSION TAG SEQADV 3NNQ HIS A 111 UNP P03355 EXPRESSION TAG SEQADV 3NNQ HIS A 112 UNP P03355 EXPRESSION TAG SEQADV 3NNQ HIS A 113 UNP P03355 EXPRESSION TAG SEQADV 3NNQ HIS A 114 UNP P03355 EXPRESSION TAG SEQADV 3NNQ MSE B 1 UNP P03355 EXPRESSION TAG SEQADV 3NNQ LEU B 107 UNP P03355 EXPRESSION TAG SEQADV 3NNQ GLU B 108 UNP P03355 EXPRESSION TAG SEQADV 3NNQ HIS B 109 UNP P03355 EXPRESSION TAG SEQADV 3NNQ HIS B 110 UNP P03355 EXPRESSION TAG SEQADV 3NNQ HIS B 111 UNP P03355 EXPRESSION TAG SEQADV 3NNQ HIS B 112 UNP P03355 EXPRESSION TAG SEQADV 3NNQ HIS B 113 UNP P03355 EXPRESSION TAG SEQADV 3NNQ HIS B 114 UNP P03355 EXPRESSION TAG SEQRES 1 A 114 MSE ILE GLU ASN SER SER PRO TYR THR SER GLU HIS PHE SEQRES 2 A 114 HIS TYR THR VAL THR ASP ILE LYS ASP LEU THR LYS LEU SEQRES 3 A 114 GLY ALA ILE TYR ASP LYS THR LYS LYS TYR TRP VAL TYR SEQRES 4 A 114 GLN GLY LYS PRO VAL MSE PRO ASP GLN PHE THR PHE GLU SEQRES 5 A 114 LEU LEU ASP PHE LEU HIS GLN LEU THR HIS LEU SER PHE SEQRES 6 A 114 SER LYS MSE LYS ALA LEU LEU GLU ARG SER HIS SER PRO SEQRES 7 A 114 TYR TYR MSE LEU ASN ARG ASP ARG THR LEU LYS ASN ILE SEQRES 8 A 114 THR GLU THR CYS LYS ALA CYS ALA GLN VAL ASN ALA SER SEQRES 9 A 114 LYS SER LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 114 MSE ILE GLU ASN SER SER PRO TYR THR SER GLU HIS PHE SEQRES 2 B 114 HIS TYR THR VAL THR ASP ILE LYS ASP LEU THR LYS LEU SEQRES 3 B 114 GLY ALA ILE TYR ASP LYS THR LYS LYS TYR TRP VAL TYR SEQRES 4 B 114 GLN GLY LYS PRO VAL MSE PRO ASP GLN PHE THR PHE GLU SEQRES 5 B 114 LEU LEU ASP PHE LEU HIS GLN LEU THR HIS LEU SER PHE SEQRES 6 B 114 SER LYS MSE LYS ALA LEU LEU GLU ARG SER HIS SER PRO SEQRES 7 B 114 TYR TYR MSE LEU ASN ARG ASP ARG THR LEU LYS ASN ILE SEQRES 8 B 114 THR GLU THR CYS LYS ALA CYS ALA GLN VAL ASN ALA SER SEQRES 9 B 114 LYS SER LEU GLU HIS HIS HIS HIS HIS HIS MODRES 3NNQ MSE A 45 MET SELENOMETHIONINE MODRES 3NNQ MSE A 68 MET SELENOMETHIONINE MODRES 3NNQ MSE A 81 MET SELENOMETHIONINE MODRES 3NNQ MSE B 45 MET SELENOMETHIONINE MODRES 3NNQ MSE B 68 MET SELENOMETHIONINE MODRES 3NNQ MSE B 81 MET SELENOMETHIONINE HET MSE A 45 8 HET MSE A 68 8 HET MSE A 81 8 HET MSE B 45 8 HET MSE B 68 8 HET MSE B 81 8 HET ZN A 201 1 HET ACT A 115 4 HET ZN B 201 1 HET ACT B 115 4 HETNAM MSE SELENOMETHIONINE HETNAM ZN ZINC ION HETNAM ACT ACETATE ION FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 ZN 2(ZN 2+) FORMUL 4 ACT 2(C2 H3 O2 1-) FORMUL 7 HOH *36(H2 O) HELIX 1 1 THR A 16 GLY A 27 1 12 HELIX 2 2 PRO A 46 HIS A 62 1 17 HELIX 3 3 SER A 64 HIS A 76 1 13 HELIX 4 4 ASN A 83 CYS A 95 1 13 HELIX 5 5 CYS A 95 ALA A 103 1 9 HELIX 6 6 THR B 16 GLY B 27 1 12 HELIX 7 7 PRO B 46 HIS B 62 1 17 HELIX 8 8 SER B 64 HIS B 76 1 13 HELIX 9 9 ASN B 83 CYS B 95 1 13 HELIX 10 10 CYS B 95 ALA B 103 1 9 SHEET 1 A 4 ILE A 29 ASP A 31 0 SHEET 2 A 4 TYR A 36 TYR A 39 -1 O VAL A 38 N ILE A 29 SHEET 3 A 4 LYS A 42 MSE A 45 -1 O VAL A 44 N TRP A 37 SHEET 4 A 4 TYR A 80 MSE A 81 1 O TYR A 80 N MSE A 45 SHEET 1 B 4 ILE B 29 ASP B 31 0 SHEET 2 B 4 TYR B 36 TYR B 39 -1 O VAL B 38 N ILE B 29 SHEET 3 B 4 LYS B 42 MSE B 45 -1 O VAL B 44 N TRP B 37 SHEET 4 B 4 TYR B 80 MSE B 81 1 O TYR B 80 N MSE B 45 LINK C VAL A 44 N MSE A 45 1555 1555 1.33 LINK C MSE A 45 N PRO A 46 1555 1555 1.35 LINK C LYS A 67 N MSE A 68 1555 1555 1.33 LINK C MSE A 68 N LYS A 69 1555 1555 1.33 LINK C TYR A 80 N MSE A 81 1555 1555 1.33 LINK C MSE A 81 N LEU A 82 1555 1555 1.33 LINK C VAL B 44 N MSE B 45 1555 1555 1.33 LINK C MSE B 45 N PRO B 46 1555 1555 1.35 LINK C LYS B 67 N MSE B 68 1555 1555 1.33 LINK C MSE B 68 N LYS B 69 1555 1555 1.33 LINK C TYR B 80 N MSE B 81 1555 1555 1.33 LINK C MSE B 81 N LEU B 82 1555 1555 1.33 LINK NE2 HIS A 58 ZN ZN A 201 1555 1555 2.05 LINK ND1 HIS A 62 ZN ZN A 201 1555 1555 2.06 LINK SG CYS A 95 ZN ZN A 201 1555 1555 2.28 LINK SG CYS A 98 ZN ZN A 201 1555 1555 2.33 LINK NE2 HIS B 58 ZN ZN B 201 1555 1555 2.09 LINK ND1 HIS B 62 ZN ZN B 201 1555 1555 2.07 LINK SG CYS B 95 ZN ZN B 201 1555 1555 2.30 LINK SG CYS B 98 ZN ZN B 201 1555 1555 2.28 SITE 1 AC1 4 HIS A 58 HIS A 62 CYS A 95 CYS A 98 SITE 1 AC2 3 LEU A 71 ARG A 74 HOH A 124 SITE 1 AC3 4 HIS B 58 HIS B 62 CYS B 95 CYS B 98 SITE 1 AC4 3 LEU B 71 HOH B 116 HOH B 124 CRYST1 112.818 112.818 115.528 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008864 0.005118 0.000000 0.00000 SCALE2 0.000000 0.010235 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008656 0.00000