data_3NQK # _entry.id 3NQK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3NQK pdb_00003nqk 10.2210/pdb3nqk/pdb RCSB RCSB060155 ? ? WWPDB D_1000060155 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 416718 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3NQK _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-06-29 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a STRUCTURAL GENOMICS, UNKNOWN FUNCTION (BACOVA_03322) from Bacteroides ovatus at 2.61 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3NQK _cell.length_a 124.073 _cell.length_b 124.073 _cell.length_c 66.888 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3NQK _symmetry.Int_Tables_number 150 _symmetry.space_group_name_H-M 'P 3 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'uncharacterized protein' 37451.086 1 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 3 water nat water 18.015 79 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GNEWEDEQYEQYVSFKAPIASGSDGVTTIYVRYKDNGKVTYQLPIIVSGSTVNSQDRDIHIAVDKDTLKTLNIERFSLYR PELWYTE(MSE)EEDKYEFPETVHIPAGSCVELLNIDFNLQDID(MSE)LEKWVLPLTIVDDGSYAYQSHPRKNYAKALL KVVPFNNYSGSYTASS(MSE)KVYTYINGKPDTNARTTDKRTGYVVDNNSIFFYAGLINED(MSE)DKD(MSE)RKKYKI NVHFKEDGTLD(MSE)KQDDPSNE(MSE)EFELIGTPTYSSTSV(MSE)DATRPYLERRYVQI(MSE)FEYDFQDFTYGG SGTEVIPIKYRVAGS(MSE)TLLRNINTQIPDEDQQIEW ; _entity_poly.pdbx_seq_one_letter_code_can ;GNEWEDEQYEQYVSFKAPIASGSDGVTTIYVRYKDNGKVTYQLPIIVSGSTVNSQDRDIHIAVDKDTLKTLNIERFSLYR PELWYTEMEEDKYEFPETVHIPAGSCVELLNIDFNLQDIDMLEKWVLPLTIVDDGSYAYQSHPRKNYAKALLKVVPFNNY SGSYTASSMKVYTYINGKPDTNARTTDKRTGYVVDNNSIFFYAGLINEDMDKDMRKKYKINVHFKEDGTLDMKQDDPSNE MEFELIGTPTYSSTSVMDATRPYLERRYVQIMFEYDFQDFTYGGSGTEVIPIKYRVAGSMTLLRNINTQIPDEDQQIEW ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 416718 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ASN n 1 3 GLU n 1 4 TRP n 1 5 GLU n 1 6 ASP n 1 7 GLU n 1 8 GLN n 1 9 TYR n 1 10 GLU n 1 11 GLN n 1 12 TYR n 1 13 VAL n 1 14 SER n 1 15 PHE n 1 16 LYS n 1 17 ALA n 1 18 PRO n 1 19 ILE n 1 20 ALA n 1 21 SER n 1 22 GLY n 1 23 SER n 1 24 ASP n 1 25 GLY n 1 26 VAL n 1 27 THR n 1 28 THR n 1 29 ILE n 1 30 TYR n 1 31 VAL n 1 32 ARG n 1 33 TYR n 1 34 LYS n 1 35 ASP n 1 36 ASN n 1 37 GLY n 1 38 LYS n 1 39 VAL n 1 40 THR n 1 41 TYR n 1 42 GLN n 1 43 LEU n 1 44 PRO n 1 45 ILE n 1 46 ILE n 1 47 VAL n 1 48 SER n 1 49 GLY n 1 50 SER n 1 51 THR n 1 52 VAL n 1 53 ASN n 1 54 SER n 1 55 GLN n 1 56 ASP n 1 57 ARG n 1 58 ASP n 1 59 ILE n 1 60 HIS n 1 61 ILE n 1 62 ALA n 1 63 VAL n 1 64 ASP n 1 65 LYS n 1 66 ASP n 1 67 THR n 1 68 LEU n 1 69 LYS n 1 70 THR n 1 71 LEU n 1 72 ASN n 1 73 ILE n 1 74 GLU n 1 75 ARG n 1 76 PHE n 1 77 SER n 1 78 LEU n 1 79 TYR n 1 80 ARG n 1 81 PRO n 1 82 GLU n 1 83 LEU n 1 84 TRP n 1 85 TYR n 1 86 THR n 1 87 GLU n 1 88 MSE n 1 89 GLU n 1 90 GLU n 1 91 ASP n 1 92 LYS n 1 93 TYR n 1 94 GLU n 1 95 PHE n 1 96 PRO n 1 97 GLU n 1 98 THR n 1 99 VAL n 1 100 HIS n 1 101 ILE n 1 102 PRO n 1 103 ALA n 1 104 GLY n 1 105 SER n 1 106 CYS n 1 107 VAL n 1 108 GLU n 1 109 LEU n 1 110 LEU n 1 111 ASN n 1 112 ILE n 1 113 ASP n 1 114 PHE n 1 115 ASN n 1 116 LEU n 1 117 GLN n 1 118 ASP n 1 119 ILE n 1 120 ASP n 1 121 MSE n 1 122 LEU n 1 123 GLU n 1 124 LYS n 1 125 TRP n 1 126 VAL n 1 127 LEU n 1 128 PRO n 1 129 LEU n 1 130 THR n 1 131 ILE n 1 132 VAL n 1 133 ASP n 1 134 ASP n 1 135 GLY n 1 136 SER n 1 137 TYR n 1 138 ALA n 1 139 TYR n 1 140 GLN n 1 141 SER n 1 142 HIS n 1 143 PRO n 1 144 ARG n 1 145 LYS n 1 146 ASN n 1 147 TYR n 1 148 ALA n 1 149 LYS n 1 150 ALA n 1 151 LEU n 1 152 LEU n 1 153 LYS n 1 154 VAL n 1 155 VAL n 1 156 PRO n 1 157 PHE n 1 158 ASN n 1 159 ASN n 1 160 TYR n 1 161 SER n 1 162 GLY n 1 163 SER n 1 164 TYR n 1 165 THR n 1 166 ALA n 1 167 SER n 1 168 SER n 1 169 MSE n 1 170 LYS n 1 171 VAL n 1 172 TYR n 1 173 THR n 1 174 TYR n 1 175 ILE n 1 176 ASN n 1 177 GLY n 1 178 LYS n 1 179 PRO n 1 180 ASP n 1 181 THR n 1 182 ASN n 1 183 ALA n 1 184 ARG n 1 185 THR n 1 186 THR n 1 187 ASP n 1 188 LYS n 1 189 ARG n 1 190 THR n 1 191 GLY n 1 192 TYR n 1 193 VAL n 1 194 VAL n 1 195 ASP n 1 196 ASN n 1 197 ASN n 1 198 SER n 1 199 ILE n 1 200 PHE n 1 201 PHE n 1 202 TYR n 1 203 ALA n 1 204 GLY n 1 205 LEU n 1 206 ILE n 1 207 ASN n 1 208 GLU n 1 209 ASP n 1 210 MSE n 1 211 ASP n 1 212 LYS n 1 213 ASP n 1 214 MSE n 1 215 ARG n 1 216 LYS n 1 217 LYS n 1 218 TYR n 1 219 LYS n 1 220 ILE n 1 221 ASN n 1 222 VAL n 1 223 HIS n 1 224 PHE n 1 225 LYS n 1 226 GLU n 1 227 ASP n 1 228 GLY n 1 229 THR n 1 230 LEU n 1 231 ASP n 1 232 MSE n 1 233 LYS n 1 234 GLN n 1 235 ASP n 1 236 ASP n 1 237 PRO n 1 238 SER n 1 239 ASN n 1 240 GLU n 1 241 MSE n 1 242 GLU n 1 243 PHE n 1 244 GLU n 1 245 LEU n 1 246 ILE n 1 247 GLY n 1 248 THR n 1 249 PRO n 1 250 THR n 1 251 TYR n 1 252 SER n 1 253 SER n 1 254 THR n 1 255 SER n 1 256 VAL n 1 257 MSE n 1 258 ASP n 1 259 ALA n 1 260 THR n 1 261 ARG n 1 262 PRO n 1 263 TYR n 1 264 LEU n 1 265 GLU n 1 266 ARG n 1 267 ARG n 1 268 TYR n 1 269 VAL n 1 270 GLN n 1 271 ILE n 1 272 MSE n 1 273 PHE n 1 274 GLU n 1 275 TYR n 1 276 ASP n 1 277 PHE n 1 278 GLN n 1 279 ASP n 1 280 PHE n 1 281 THR n 1 282 TYR n 1 283 GLY n 1 284 GLY n 1 285 SER n 1 286 GLY n 1 287 THR n 1 288 GLU n 1 289 VAL n 1 290 ILE n 1 291 PRO n 1 292 ILE n 1 293 LYS n 1 294 TYR n 1 295 ARG n 1 296 VAL n 1 297 ALA n 1 298 GLY n 1 299 SER n 1 300 MSE n 1 301 THR n 1 302 LEU n 1 303 LEU n 1 304 ARG n 1 305 ASN n 1 306 ILE n 1 307 ASN n 1 308 THR n 1 309 GLN n 1 310 ILE n 1 311 PRO n 1 312 ASP n 1 313 GLU n 1 314 ASP n 1 315 GLN n 1 316 GLN n 1 317 ILE n 1 318 GLU n 1 319 TRP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene BACOVA_03322 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 8483' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacteroides ovatus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 411476 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A7LZP6_BACOV _struct_ref.pdbx_db_accession A7LZP6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NEWEDEQYEQYVSFKAPIASGSDGVTTIYVRYKDNGKVTYQLPIIVSGSTVNSQDRDIHIAVDKDTLKTLNIERFSLYRP ELWYTEMEEDKYEFPETVHIPAGSCVELLNIDFNLQDIDMLEKWVLPLTIVDDGSYAYQSHPRKNYAKALLKVVPFNNYS GSYTASSMKVYTYINGKPDTNARTTDKRTGYVVDNNSIFFYAGLINEDMDKDMRKKYKINVHFKEDGTLDMKQDDPSNEM EFELIGTPTYSSTSVMDATRPYLERRYVQIMFEYDFQDFTYGGSGTEVIPIKYRVAGSMTLLRNINTQIPDEDQQIEW ; _struct_ref.pdbx_align_begin 22 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3NQK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 319 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A7LZP6 _struct_ref_seq.db_align_beg 22 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 339 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 22 _struct_ref_seq.pdbx_auth_seq_align_end 339 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3NQK _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code A7LZP6 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 21 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3NQK # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.97 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 69.00 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.6 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.200000000M (NH4)2Tartrate, 20.000000000% PEG-3350, No Buffer pH 6.6, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2010-04-07 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97937 1.0 3 0.97908 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.91837,0.97937,0.97908 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3NQK _reflns.d_resolution_high 2.61 _reflns.d_resolution_low 29.801 _reflns.number_all ? _reflns.number_obs 18340 _reflns.pdbx_Rsym_value 0.158 _reflns.pdbx_redundancy 11.700 _reflns.percent_possible_obs 99.900 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 3NQK _refine.ls_d_res_high 2.610 _refine.ls_d_res_low 29.801 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.870 _refine.ls_number_reflns_obs 18334 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;(1). HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. (2). A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. (3). ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. (4). WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. (5). ETHYLENE GLYCOL (EDO), USED AS A CRYOPROTECTANT, WAS MODELED INTO THE STRUCTURE. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.200 _refine.ls_R_factor_R_work 0.198 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.236 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 940 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 51.264 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.830 _refine.aniso_B[2][2] 0.830 _refine.aniso_B[3][3] -1.250 _refine.aniso_B[1][2] 0.420 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.949 _refine.correlation_coeff_Fo_to_Fc_free 0.926 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.241 _refine.overall_SU_ML 0.171 _refine.overall_SU_B 16.365 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 110.73 _refine.B_iso_min 21.85 _refine.occupancy_max 1.00 _refine.occupancy_min 0.33 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2457 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 79 _refine_hist.number_atoms_total 2544 _refine_hist.d_res_high 2.610 _refine_hist.d_res_low 29.801 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 2540 0.015 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 1700 0.001 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 3448 0.917 1.959 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 4149 0.616 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 309 5.140 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 125 29.494 24.800 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 434 12.664 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 12 17.688 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 378 0.064 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 2823 0.007 0.021 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 514 0.001 0.020 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 1530 1.868 3.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 615 0.325 3.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 2496 3.578 5.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 1010 5.280 8.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 949 8.114 11.000 ? ? # _refine_ls_shell.d_res_high 2.610 _refine_ls_shell.d_res_low 2.678 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.780 _refine_ls_shell.number_reflns_R_work 1260 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.387 _refine_ls_shell.R_factor_R_free 0.469 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 81 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1341 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3NQK _struct.title 'Crystal structure of a STRUCTURAL GENOMICS, UNKNOWN FUNCTION (BACOVA_03322) from Bacteroides ovatus at 2.61 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag Y _struct.pdbx_model_type_details ? # _struct_keywords.text 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2' _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.entry_id 3NQK # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ;ANALYTICAL SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A TRIMER AS A SIGNIFICANT OLIGOMERIZATION STATE IN SOLUTION. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 64 ? SER A 77 ? ASP A 84 SER A 97 1 ? 14 HELX_P HELX_P2 2 ARG A 80 ? TRP A 84 ? ARG A 100 TRP A 104 5 ? 5 HELX_P HELX_P3 3 GLU A 89 ? ASP A 91 ? GLU A 109 ASP A 111 5 ? 3 HELX_P HELX_P4 4 ASP A 211 ? LYS A 216 ? ASP A 231 LYS A 236 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLU 87 C ? ? ? 1_555 A MSE 88 N ? ? A GLU 107 A MSE 108 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale2 covale both ? A MSE 88 C ? ? ? 1_555 A GLU 89 N ? ? A MSE 108 A GLU 109 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale3 covale both ? A ASP 120 C ? ? ? 1_555 A MSE 121 N ? ? A ASP 140 A MSE 141 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale4 covale both ? A MSE 121 C ? ? ? 1_555 A LEU 122 N ? ? A MSE 141 A LEU 142 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale5 covale both ? A SER 168 C ? ? ? 1_555 A MSE 169 N ? ? A SER 188 A MSE 189 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale6 covale both ? A MSE 169 C ? ? ? 1_555 A LYS 170 N ? ? A MSE 189 A LYS 190 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale7 covale both ? A ASP 209 C ? ? ? 1_555 A MSE 210 N ? ? A ASP 229 A MSE 230 1_555 ? ? ? ? ? ? ? 1.308 ? ? covale8 covale both ? A MSE 210 C ? ? ? 1_555 A ASP 211 N ? ? A MSE 230 A ASP 231 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale9 covale both ? A ASP 213 C ? ? ? 1_555 A MSE 214 N ? ? A ASP 233 A MSE 234 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale10 covale both ? A MSE 214 C ? ? ? 1_555 A ARG 215 N ? ? A MSE 234 A ARG 235 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale11 covale both ? A ASP 231 C ? ? ? 1_555 A MSE 232 N ? ? A ASP 251 A MSE 252 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale12 covale both ? A MSE 232 C ? ? ? 1_555 A LYS 233 N ? ? A MSE 252 A LYS 253 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale13 covale both ? A GLU 240 C ? ? ? 1_555 A MSE 241 N ? ? A GLU 260 A MSE 261 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale14 covale both ? A MSE 241 C ? ? ? 1_555 A GLU 242 N ? ? A MSE 261 A GLU 262 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale15 covale both ? A VAL 256 C ? ? ? 1_555 A MSE 257 N ? ? A VAL 276 A MSE 277 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale16 covale both ? A MSE 257 C ? ? ? 1_555 A ASP 258 N ? ? A MSE 277 A ASP 278 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale17 covale both ? A ILE 271 C ? ? ? 1_555 A MSE 272 N ? ? A ILE 291 A MSE 292 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale18 covale both ? A MSE 272 C ? ? ? 1_555 A PHE 273 N ? ? A MSE 292 A PHE 293 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale19 covale both ? A SER 299 C ? ? ? 1_555 A MSE 300 N ? ? A SER 319 A MSE 320 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale20 covale both ? A MSE 300 C ? ? ? 1_555 A THR 301 N ? ? A MSE 320 A THR 321 1_555 ? ? ? ? ? ? ? 1.314 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 5 ? D ? 5 ? E ? 5 ? F ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel F 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 12 ? PHE A 15 ? TYR A 32 PHE A 35 A 2 LYS A 38 ? SER A 48 ? LYS A 58 SER A 68 A 3 VAL A 107 ? ASN A 115 ? VAL A 127 ASN A 135 A 4 TYR A 93 ? GLU A 94 ? TYR A 113 GLU A 114 B 1 THR A 27 ? ARG A 32 ? THR A 47 ARG A 52 B 2 LYS A 149 ? PHE A 157 ? LYS A 169 PHE A 177 B 3 TRP A 125 ? ASP A 133 ? TRP A 145 ASP A 153 B 4 THR A 86 ? GLU A 87 ? THR A 106 GLU A 107 C 1 THR A 27 ? ARG A 32 ? THR A 47 ARG A 52 C 2 LYS A 149 ? PHE A 157 ? LYS A 169 PHE A 177 C 3 TRP A 125 ? ASP A 133 ? TRP A 145 ASP A 153 C 4 ARG A 57 ? VAL A 63 ? ARG A 77 VAL A 83 C 5 THR A 98 ? ILE A 101 ? THR A 118 ILE A 121 D 1 GLY A 162 ? THR A 165 ? GLY A 182 THR A 185 D 2 LYS A 188 ? ASP A 195 ? LYS A 208 ASP A 215 D 3 SER A 198 ? TYR A 202 ? SER A 218 TYR A 222 D 4 LYS A 219 ? PHE A 224 ? LYS A 239 PHE A 244 D 5 LEU A 230 ? GLN A 234 ? LEU A 250 GLN A 254 E 1 LYS A 178 ? ARG A 184 ? LYS A 198 ARG A 204 E 2 MSE A 169 ? ILE A 175 ? MSE A 189 ILE A 195 E 3 ILE A 292 ? ASN A 307 ? ILE A 312 ASN A 327 E 4 LEU A 264 ? ASP A 279 ? LEU A 284 ASP A 299 E 5 GLU A 244 ? LEU A 245 ? GLU A 264 LEU A 265 F 1 LYS A 178 ? ARG A 184 ? LYS A 198 ARG A 204 F 2 MSE A 169 ? ILE A 175 ? MSE A 189 ILE A 195 F 3 ILE A 292 ? ASN A 307 ? ILE A 312 ASN A 327 F 4 LEU A 264 ? ASP A 279 ? LEU A 284 ASP A 299 F 5 THR A 250 ? MSE A 257 ? THR A 270 MSE A 277 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 14 ? N SER A 34 O ILE A 46 ? O ILE A 66 A 2 3 N TYR A 41 ? N TYR A 61 O ILE A 112 ? O ILE A 132 A 3 4 O ASP A 113 ? O ASP A 133 N GLU A 94 ? N GLU A 114 B 1 2 N THR A 27 ? N THR A 47 O LYS A 153 ? O LYS A 173 B 2 3 O ALA A 150 ? O ALA A 170 N LEU A 129 ? N LEU A 149 B 3 4 O VAL A 126 ? O VAL A 146 N THR A 86 ? N THR A 106 C 1 2 N THR A 27 ? N THR A 47 O LYS A 153 ? O LYS A 173 C 2 3 O ALA A 150 ? O ALA A 170 N LEU A 129 ? N LEU A 149 C 3 4 O THR A 130 ? O THR A 150 N ALA A 62 ? N ALA A 82 C 4 5 N ILE A 59 ? N ILE A 79 O VAL A 99 ? O VAL A 119 D 1 2 N GLY A 162 ? N GLY A 182 O GLY A 191 ? O GLY A 211 D 2 3 N TYR A 192 ? N TYR A 212 O PHE A 200 ? O PHE A 220 D 3 4 N ILE A 199 ? N ILE A 219 O VAL A 222 ? O VAL A 242 D 4 5 N ASN A 221 ? N ASN A 241 O LYS A 233 ? O LYS A 253 E 1 2 O LYS A 178 ? O LYS A 198 N ILE A 175 ? N ILE A 195 E 2 3 N TYR A 172 ? N TYR A 192 O ARG A 295 ? O ARG A 315 E 3 4 O ILE A 306 ? O ILE A 326 N GLU A 265 ? N GLU A 285 E 4 5 O ASP A 276 ? O ASP A 296 N GLU A 244 ? N GLU A 264 F 1 2 O LYS A 178 ? O LYS A 198 N ILE A 175 ? N ILE A 195 F 2 3 N TYR A 172 ? N TYR A 192 O ARG A 295 ? O ARG A 315 F 3 4 O ILE A 306 ? O ILE A 326 N GLU A 265 ? N GLU A 285 F 4 5 O MSE A 272 ? O MSE A 292 N THR A 250 ? N THR A 270 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 401 ? 4 'BINDING SITE FOR RESIDUE EDO A 401' AC2 Software A EDO 402 ? 2 'BINDING SITE FOR RESIDUE EDO A 402' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 GLY A 22 ? GLY A 42 . ? 1_555 ? 2 AC1 4 SER A 23 ? SER A 43 . ? 1_555 ? 3 AC1 4 ASP A 24 ? ASP A 44 . ? 1_555 ? 4 AC1 4 VAL A 26 ? VAL A 46 . ? 1_555 ? 5 AC2 2 GLU A 94 ? GLU A 114 . ? 1_555 ? 6 AC2 2 PHE A 95 ? PHE A 115 . ? 1_555 ? # _atom_sites.entry_id 3NQK _atom_sites.fract_transf_matrix[1][1] 0.008060 _atom_sites.fract_transf_matrix[1][2] 0.004653 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009307 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014950 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 21 ? ? ? A . n A 1 2 ASN 2 22 ? ? ? A . n A 1 3 GLU 3 23 ? ? ? A . n A 1 4 TRP 4 24 ? ? ? A . n A 1 5 GLU 5 25 ? ? ? A . n A 1 6 ASP 6 26 ? ? ? A . n A 1 7 GLU 7 27 ? ? ? A . n A 1 8 GLN 8 28 ? ? ? A . n A 1 9 TYR 9 29 ? ? ? A . n A 1 10 GLU 10 30 ? ? ? A . n A 1 11 GLN 11 31 31 GLN GLN A . n A 1 12 TYR 12 32 32 TYR TYR A . n A 1 13 VAL 13 33 33 VAL VAL A . n A 1 14 SER 14 34 34 SER SER A . n A 1 15 PHE 15 35 35 PHE PHE A . n A 1 16 LYS 16 36 36 LYS LYS A . n A 1 17 ALA 17 37 37 ALA ALA A . n A 1 18 PRO 18 38 38 PRO PRO A . n A 1 19 ILE 19 39 39 ILE ILE A . n A 1 20 ALA 20 40 40 ALA ALA A . n A 1 21 SER 21 41 41 SER SER A . n A 1 22 GLY 22 42 42 GLY GLY A . n A 1 23 SER 23 43 43 SER SER A . n A 1 24 ASP 24 44 44 ASP ASP A . n A 1 25 GLY 25 45 45 GLY GLY A . n A 1 26 VAL 26 46 46 VAL VAL A . n A 1 27 THR 27 47 47 THR THR A . n A 1 28 THR 28 48 48 THR THR A . n A 1 29 ILE 29 49 49 ILE ILE A . n A 1 30 TYR 30 50 50 TYR TYR A . n A 1 31 VAL 31 51 51 VAL VAL A . n A 1 32 ARG 32 52 52 ARG ARG A . n A 1 33 TYR 33 53 53 TYR TYR A . n A 1 34 LYS 34 54 54 LYS LYS A . n A 1 35 ASP 35 55 55 ASP ASP A . n A 1 36 ASN 36 56 56 ASN ASN A . n A 1 37 GLY 37 57 57 GLY GLY A . n A 1 38 LYS 38 58 58 LYS LYS A . n A 1 39 VAL 39 59 59 VAL VAL A . n A 1 40 THR 40 60 60 THR THR A . n A 1 41 TYR 41 61 61 TYR TYR A . n A 1 42 GLN 42 62 62 GLN GLN A . n A 1 43 LEU 43 63 63 LEU LEU A . n A 1 44 PRO 44 64 64 PRO PRO A . n A 1 45 ILE 45 65 65 ILE ILE A . n A 1 46 ILE 46 66 66 ILE ILE A . n A 1 47 VAL 47 67 67 VAL VAL A . n A 1 48 SER 48 68 68 SER SER A . n A 1 49 GLY 49 69 69 GLY GLY A . n A 1 50 SER 50 70 70 SER SER A . n A 1 51 THR 51 71 71 THR THR A . n A 1 52 VAL 52 72 72 VAL VAL A . n A 1 53 ASN 53 73 73 ASN ASN A . n A 1 54 SER 54 74 74 SER SER A . n A 1 55 GLN 55 75 75 GLN GLN A . n A 1 56 ASP 56 76 76 ASP ASP A . n A 1 57 ARG 57 77 77 ARG ARG A . n A 1 58 ASP 58 78 78 ASP ASP A . n A 1 59 ILE 59 79 79 ILE ILE A . n A 1 60 HIS 60 80 80 HIS HIS A . n A 1 61 ILE 61 81 81 ILE ILE A . n A 1 62 ALA 62 82 82 ALA ALA A . n A 1 63 VAL 63 83 83 VAL VAL A . n A 1 64 ASP 64 84 84 ASP ASP A . n A 1 65 LYS 65 85 85 LYS LYS A . n A 1 66 ASP 66 86 86 ASP ASP A . n A 1 67 THR 67 87 87 THR THR A . n A 1 68 LEU 68 88 88 LEU LEU A . n A 1 69 LYS 69 89 89 LYS LYS A . n A 1 70 THR 70 90 90 THR THR A . n A 1 71 LEU 71 91 91 LEU LEU A . n A 1 72 ASN 72 92 92 ASN ASN A . n A 1 73 ILE 73 93 93 ILE ILE A . n A 1 74 GLU 74 94 94 GLU GLU A . n A 1 75 ARG 75 95 95 ARG ARG A . n A 1 76 PHE 76 96 96 PHE PHE A . n A 1 77 SER 77 97 97 SER SER A . n A 1 78 LEU 78 98 98 LEU LEU A . n A 1 79 TYR 79 99 99 TYR TYR A . n A 1 80 ARG 80 100 100 ARG ARG A . n A 1 81 PRO 81 101 101 PRO PRO A . n A 1 82 GLU 82 102 102 GLU GLU A . n A 1 83 LEU 83 103 103 LEU LEU A . n A 1 84 TRP 84 104 104 TRP TRP A . n A 1 85 TYR 85 105 105 TYR TYR A . n A 1 86 THR 86 106 106 THR THR A . n A 1 87 GLU 87 107 107 GLU GLU A . n A 1 88 MSE 88 108 108 MSE MSE A . n A 1 89 GLU 89 109 109 GLU GLU A . n A 1 90 GLU 90 110 110 GLU GLU A . n A 1 91 ASP 91 111 111 ASP ASP A . n A 1 92 LYS 92 112 112 LYS LYS A . n A 1 93 TYR 93 113 113 TYR TYR A . n A 1 94 GLU 94 114 114 GLU GLU A . n A 1 95 PHE 95 115 115 PHE PHE A . n A 1 96 PRO 96 116 116 PRO PRO A . n A 1 97 GLU 97 117 117 GLU GLU A . n A 1 98 THR 98 118 118 THR THR A . n A 1 99 VAL 99 119 119 VAL VAL A . n A 1 100 HIS 100 120 120 HIS HIS A . n A 1 101 ILE 101 121 121 ILE ILE A . n A 1 102 PRO 102 122 122 PRO PRO A . n A 1 103 ALA 103 123 123 ALA ALA A . n A 1 104 GLY 104 124 124 GLY GLY A . n A 1 105 SER 105 125 125 SER SER A . n A 1 106 CYS 106 126 126 CYS CYS A . n A 1 107 VAL 107 127 127 VAL VAL A . n A 1 108 GLU 108 128 128 GLU GLU A . n A 1 109 LEU 109 129 129 LEU LEU A . n A 1 110 LEU 110 130 130 LEU LEU A . n A 1 111 ASN 111 131 131 ASN ASN A . n A 1 112 ILE 112 132 132 ILE ILE A . n A 1 113 ASP 113 133 133 ASP ASP A . n A 1 114 PHE 114 134 134 PHE PHE A . n A 1 115 ASN 115 135 135 ASN ASN A . n A 1 116 LEU 116 136 136 LEU LEU A . n A 1 117 GLN 117 137 137 GLN GLN A . n A 1 118 ASP 118 138 138 ASP ASP A . n A 1 119 ILE 119 139 139 ILE ILE A . n A 1 120 ASP 120 140 140 ASP ASP A . n A 1 121 MSE 121 141 141 MSE MSE A . n A 1 122 LEU 122 142 142 LEU LEU A . n A 1 123 GLU 123 143 143 GLU GLU A . n A 1 124 LYS 124 144 144 LYS LYS A . n A 1 125 TRP 125 145 145 TRP TRP A . n A 1 126 VAL 126 146 146 VAL VAL A . n A 1 127 LEU 127 147 147 LEU LEU A . n A 1 128 PRO 128 148 148 PRO PRO A . n A 1 129 LEU 129 149 149 LEU LEU A . n A 1 130 THR 130 150 150 THR THR A . n A 1 131 ILE 131 151 151 ILE ILE A . n A 1 132 VAL 132 152 152 VAL VAL A . n A 1 133 ASP 133 153 153 ASP ASP A . n A 1 134 ASP 134 154 154 ASP ASP A . n A 1 135 GLY 135 155 155 GLY GLY A . n A 1 136 SER 136 156 156 SER SER A . n A 1 137 TYR 137 157 157 TYR TYR A . n A 1 138 ALA 138 158 158 ALA ALA A . n A 1 139 TYR 139 159 159 TYR TYR A . n A 1 140 GLN 140 160 160 GLN GLN A . n A 1 141 SER 141 161 ? ? ? A . n A 1 142 HIS 142 162 ? ? ? A . n A 1 143 PRO 143 163 ? ? ? A . n A 1 144 ARG 144 164 ? ? ? A . n A 1 145 LYS 145 165 165 LYS LYS A . n A 1 146 ASN 146 166 166 ASN ASN A . n A 1 147 TYR 147 167 167 TYR TYR A . n A 1 148 ALA 148 168 168 ALA ALA A . n A 1 149 LYS 149 169 169 LYS LYS A . n A 1 150 ALA 150 170 170 ALA ALA A . n A 1 151 LEU 151 171 171 LEU LEU A . n A 1 152 LEU 152 172 172 LEU LEU A . n A 1 153 LYS 153 173 173 LYS LYS A . n A 1 154 VAL 154 174 174 VAL VAL A . n A 1 155 VAL 155 175 175 VAL VAL A . n A 1 156 PRO 156 176 176 PRO PRO A . n A 1 157 PHE 157 177 177 PHE PHE A . n A 1 158 ASN 158 178 178 ASN ASN A . n A 1 159 ASN 159 179 179 ASN ASN A . n A 1 160 TYR 160 180 180 TYR TYR A . n A 1 161 SER 161 181 181 SER SER A . n A 1 162 GLY 162 182 182 GLY GLY A . n A 1 163 SER 163 183 183 SER SER A . n A 1 164 TYR 164 184 184 TYR TYR A . n A 1 165 THR 165 185 185 THR THR A . n A 1 166 ALA 166 186 186 ALA ALA A . n A 1 167 SER 167 187 187 SER SER A . n A 1 168 SER 168 188 188 SER SER A . n A 1 169 MSE 169 189 189 MSE MSE A . n A 1 170 LYS 170 190 190 LYS LYS A . n A 1 171 VAL 171 191 191 VAL VAL A . n A 1 172 TYR 172 192 192 TYR TYR A . n A 1 173 THR 173 193 193 THR THR A . n A 1 174 TYR 174 194 194 TYR TYR A . n A 1 175 ILE 175 195 195 ILE ILE A . n A 1 176 ASN 176 196 196 ASN ASN A . n A 1 177 GLY 177 197 197 GLY GLY A . n A 1 178 LYS 178 198 198 LYS LYS A . n A 1 179 PRO 179 199 199 PRO PRO A . n A 1 180 ASP 180 200 200 ASP ASP A . n A 1 181 THR 181 201 201 THR THR A . n A 1 182 ASN 182 202 202 ASN ASN A . n A 1 183 ALA 183 203 203 ALA ALA A . n A 1 184 ARG 184 204 204 ARG ARG A . n A 1 185 THR 185 205 205 THR THR A . n A 1 186 THR 186 206 206 THR THR A . n A 1 187 ASP 187 207 207 ASP ASP A . n A 1 188 LYS 188 208 208 LYS LYS A . n A 1 189 ARG 189 209 209 ARG ARG A . n A 1 190 THR 190 210 210 THR THR A . n A 1 191 GLY 191 211 211 GLY GLY A . n A 1 192 TYR 192 212 212 TYR TYR A . n A 1 193 VAL 193 213 213 VAL VAL A . n A 1 194 VAL 194 214 214 VAL VAL A . n A 1 195 ASP 195 215 215 ASP ASP A . n A 1 196 ASN 196 216 216 ASN ASN A . n A 1 197 ASN 197 217 217 ASN ASN A . n A 1 198 SER 198 218 218 SER SER A . n A 1 199 ILE 199 219 219 ILE ILE A . n A 1 200 PHE 200 220 220 PHE PHE A . n A 1 201 PHE 201 221 221 PHE PHE A . n A 1 202 TYR 202 222 222 TYR TYR A . n A 1 203 ALA 203 223 223 ALA ALA A . n A 1 204 GLY 204 224 224 GLY GLY A . n A 1 205 LEU 205 225 225 LEU LEU A . n A 1 206 ILE 206 226 226 ILE ILE A . n A 1 207 ASN 207 227 227 ASN ASN A . n A 1 208 GLU 208 228 228 GLU GLU A . n A 1 209 ASP 209 229 229 ASP ASP A . n A 1 210 MSE 210 230 230 MSE MSE A . n A 1 211 ASP 211 231 231 ASP ASP A . n A 1 212 LYS 212 232 232 LYS LYS A . n A 1 213 ASP 213 233 233 ASP ASP A . n A 1 214 MSE 214 234 234 MSE MSE A . n A 1 215 ARG 215 235 235 ARG ARG A . n A 1 216 LYS 216 236 236 LYS LYS A . n A 1 217 LYS 217 237 237 LYS LYS A . n A 1 218 TYR 218 238 238 TYR TYR A . n A 1 219 LYS 219 239 239 LYS LYS A . n A 1 220 ILE 220 240 240 ILE ILE A . n A 1 221 ASN 221 241 241 ASN ASN A . n A 1 222 VAL 222 242 242 VAL VAL A . n A 1 223 HIS 223 243 243 HIS HIS A . n A 1 224 PHE 224 244 244 PHE PHE A . n A 1 225 LYS 225 245 245 LYS LYS A . n A 1 226 GLU 226 246 246 GLU GLU A . n A 1 227 ASP 227 247 247 ASP ASP A . n A 1 228 GLY 228 248 248 GLY GLY A . n A 1 229 THR 229 249 249 THR THR A . n A 1 230 LEU 230 250 250 LEU LEU A . n A 1 231 ASP 231 251 251 ASP ASP A . n A 1 232 MSE 232 252 252 MSE MSE A . n A 1 233 LYS 233 253 253 LYS LYS A . n A 1 234 GLN 234 254 254 GLN GLN A . n A 1 235 ASP 235 255 255 ASP ASP A . n A 1 236 ASP 236 256 256 ASP ASP A . n A 1 237 PRO 237 257 257 PRO PRO A . n A 1 238 SER 238 258 258 SER SER A . n A 1 239 ASN 239 259 259 ASN ASN A . n A 1 240 GLU 240 260 260 GLU GLU A . n A 1 241 MSE 241 261 261 MSE MSE A . n A 1 242 GLU 242 262 262 GLU GLU A . n A 1 243 PHE 243 263 263 PHE PHE A . n A 1 244 GLU 244 264 264 GLU GLU A . n A 1 245 LEU 245 265 265 LEU LEU A . n A 1 246 ILE 246 266 266 ILE ILE A . n A 1 247 GLY 247 267 267 GLY GLY A . n A 1 248 THR 248 268 268 THR THR A . n A 1 249 PRO 249 269 269 PRO PRO A . n A 1 250 THR 250 270 270 THR THR A . n A 1 251 TYR 251 271 271 TYR TYR A . n A 1 252 SER 252 272 272 SER SER A . n A 1 253 SER 253 273 273 SER SER A . n A 1 254 THR 254 274 274 THR THR A . n A 1 255 SER 255 275 275 SER SER A . n A 1 256 VAL 256 276 276 VAL VAL A . n A 1 257 MSE 257 277 277 MSE MSE A . n A 1 258 ASP 258 278 278 ASP ASP A . n A 1 259 ALA 259 279 279 ALA ALA A . n A 1 260 THR 260 280 280 THR THR A . n A 1 261 ARG 261 281 281 ARG ARG A . n A 1 262 PRO 262 282 282 PRO PRO A . n A 1 263 TYR 263 283 283 TYR TYR A . n A 1 264 LEU 264 284 284 LEU LEU A . n A 1 265 GLU 265 285 285 GLU GLU A . n A 1 266 ARG 266 286 286 ARG ARG A . n A 1 267 ARG 267 287 287 ARG ARG A . n A 1 268 TYR 268 288 288 TYR TYR A . n A 1 269 VAL 269 289 289 VAL VAL A . n A 1 270 GLN 270 290 290 GLN GLN A . n A 1 271 ILE 271 291 291 ILE ILE A . n A 1 272 MSE 272 292 292 MSE MSE A . n A 1 273 PHE 273 293 293 PHE PHE A . n A 1 274 GLU 274 294 294 GLU GLU A . n A 1 275 TYR 275 295 295 TYR TYR A . n A 1 276 ASP 276 296 296 ASP ASP A . n A 1 277 PHE 277 297 297 PHE PHE A . n A 1 278 GLN 278 298 298 GLN GLN A . n A 1 279 ASP 279 299 299 ASP ASP A . n A 1 280 PHE 280 300 300 PHE PHE A . n A 1 281 THR 281 301 301 THR THR A . n A 1 282 TYR 282 302 302 TYR TYR A . n A 1 283 GLY 283 303 303 GLY GLY A . n A 1 284 GLY 284 304 304 GLY GLY A . n A 1 285 SER 285 305 305 SER SER A . n A 1 286 GLY 286 306 306 GLY GLY A . n A 1 287 THR 287 307 307 THR THR A . n A 1 288 GLU 288 308 308 GLU GLU A . n A 1 289 VAL 289 309 309 VAL VAL A . n A 1 290 ILE 290 310 310 ILE ILE A . n A 1 291 PRO 291 311 311 PRO PRO A . n A 1 292 ILE 292 312 312 ILE ILE A . n A 1 293 LYS 293 313 313 LYS LYS A . n A 1 294 TYR 294 314 314 TYR TYR A . n A 1 295 ARG 295 315 315 ARG ARG A . n A 1 296 VAL 296 316 316 VAL VAL A . n A 1 297 ALA 297 317 317 ALA ALA A . n A 1 298 GLY 298 318 318 GLY GLY A . n A 1 299 SER 299 319 319 SER SER A . n A 1 300 MSE 300 320 320 MSE MSE A . n A 1 301 THR 301 321 321 THR THR A . n A 1 302 LEU 302 322 322 LEU LEU A . n A 1 303 LEU 303 323 323 LEU LEU A . n A 1 304 ARG 304 324 324 ARG ARG A . n A 1 305 ASN 305 325 325 ASN ASN A . n A 1 306 ILE 306 326 326 ILE ILE A . n A 1 307 ASN 307 327 327 ASN ASN A . n A 1 308 THR 308 328 328 THR THR A . n A 1 309 GLN 309 329 329 GLN GLN A . n A 1 310 ILE 310 330 330 ILE ILE A . n A 1 311 PRO 311 331 331 PRO PRO A . n A 1 312 ASP 312 332 332 ASP ASP A . n A 1 313 GLU 313 333 333 GLU GLU A . n A 1 314 ASP 314 334 334 ASP ASP A . n A 1 315 GLN 315 335 335 GLN GLN A . n A 1 316 GLN 316 336 336 GLN GLN A . n A 1 317 ILE 317 337 337 ILE ILE A . n A 1 318 GLU 318 338 338 GLU GLU A . n A 1 319 TRP 319 339 339 TRP TRP A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 401 401 EDO EDO A . C 2 EDO 1 402 402 EDO EDO A . D 3 HOH 1 403 403 HOH HOH A . D 3 HOH 2 404 404 HOH HOH A . D 3 HOH 3 405 405 HOH HOH A . D 3 HOH 4 406 406 HOH HOH A . D 3 HOH 5 407 407 HOH HOH A . D 3 HOH 6 408 408 HOH HOH A . D 3 HOH 7 409 409 HOH HOH A . D 3 HOH 8 410 410 HOH HOH A . D 3 HOH 9 411 411 HOH HOH A . D 3 HOH 10 412 412 HOH HOH A . D 3 HOH 11 413 413 HOH HOH A . D 3 HOH 12 414 414 HOH HOH A . D 3 HOH 13 415 415 HOH HOH A . D 3 HOH 14 416 416 HOH HOH A . D 3 HOH 15 417 417 HOH HOH A . D 3 HOH 16 418 418 HOH HOH A . D 3 HOH 17 419 419 HOH HOH A . D 3 HOH 18 420 420 HOH HOH A . D 3 HOH 19 421 421 HOH HOH A . D 3 HOH 20 422 422 HOH HOH A . D 3 HOH 21 423 423 HOH HOH A . D 3 HOH 22 424 424 HOH HOH A . D 3 HOH 23 425 425 HOH HOH A . D 3 HOH 24 426 426 HOH HOH A . D 3 HOH 25 427 427 HOH HOH A . D 3 HOH 26 428 428 HOH HOH A . D 3 HOH 27 429 429 HOH HOH A . D 3 HOH 28 430 430 HOH HOH A . D 3 HOH 29 431 431 HOH HOH A . D 3 HOH 30 432 432 HOH HOH A . D 3 HOH 31 433 433 HOH HOH A . D 3 HOH 32 434 434 HOH HOH A . D 3 HOH 33 435 435 HOH HOH A . D 3 HOH 34 436 436 HOH HOH A . D 3 HOH 35 437 437 HOH HOH A . D 3 HOH 36 438 438 HOH HOH A . D 3 HOH 37 439 439 HOH HOH A . D 3 HOH 38 440 440 HOH HOH A . D 3 HOH 39 441 441 HOH HOH A . D 3 HOH 40 442 442 HOH HOH A . D 3 HOH 41 443 443 HOH HOH A . D 3 HOH 42 444 444 HOH HOH A . D 3 HOH 43 445 445 HOH HOH A . D 3 HOH 44 446 446 HOH HOH A . D 3 HOH 45 447 447 HOH HOH A . D 3 HOH 46 448 448 HOH HOH A . D 3 HOH 47 449 449 HOH HOH A . D 3 HOH 48 450 450 HOH HOH A . D 3 HOH 49 451 451 HOH HOH A . D 3 HOH 50 452 452 HOH HOH A . D 3 HOH 51 453 453 HOH HOH A . D 3 HOH 52 454 454 HOH HOH A . D 3 HOH 53 455 455 HOH HOH A . D 3 HOH 54 456 456 HOH HOH A . D 3 HOH 55 457 457 HOH HOH A . D 3 HOH 56 458 458 HOH HOH A . D 3 HOH 57 459 459 HOH HOH A . D 3 HOH 58 460 460 HOH HOH A . D 3 HOH 59 461 461 HOH HOH A . D 3 HOH 60 462 462 HOH HOH A . D 3 HOH 61 463 463 HOH HOH A . D 3 HOH 62 464 464 HOH HOH A . D 3 HOH 63 465 465 HOH HOH A . D 3 HOH 64 466 466 HOH HOH A . D 3 HOH 65 467 467 HOH HOH A . D 3 HOH 66 468 468 HOH HOH A . D 3 HOH 67 469 469 HOH HOH A . D 3 HOH 68 470 470 HOH HOH A . D 3 HOH 69 471 471 HOH HOH A . D 3 HOH 70 472 472 HOH HOH A . D 3 HOH 71 473 473 HOH HOH A . D 3 HOH 72 474 474 HOH HOH A . D 3 HOH 73 475 475 HOH HOH A . D 3 HOH 74 476 476 HOH HOH A . D 3 HOH 75 477 477 HOH HOH A . D 3 HOH 76 478 478 HOH HOH A . D 3 HOH 77 479 479 HOH HOH A . D 3 HOH 78 480 480 HOH HOH A . D 3 HOH 79 481 481 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 88 A MSE 108 ? MET SELENOMETHIONINE 2 A MSE 121 A MSE 141 ? MET SELENOMETHIONINE 3 A MSE 169 A MSE 189 ? MET SELENOMETHIONINE 4 A MSE 210 A MSE 230 ? MET SELENOMETHIONINE 5 A MSE 214 A MSE 234 ? MET SELENOMETHIONINE 6 A MSE 232 A MSE 252 ? MET SELENOMETHIONINE 7 A MSE 241 A MSE 261 ? MET SELENOMETHIONINE 8 A MSE 257 A MSE 277 ? MET SELENOMETHIONINE 9 A MSE 272 A MSE 292 ? MET SELENOMETHIONINE 10 A MSE 300 A MSE 320 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3010 ? 1 MORE -7 ? 1 'SSA (A^2)' 29880 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_556 x-y,-y,-z+1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 66.8880000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-08-04 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 1 3 2019-07-17 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 44.6370 _pdbx_refine_tls.origin_y 21.3690 _pdbx_refine_tls.origin_z 31.0480 _pdbx_refine_tls.T[1][1] 0.1176 _pdbx_refine_tls.T[2][2] 0.1519 _pdbx_refine_tls.T[3][3] 0.1676 _pdbx_refine_tls.T[1][2] -0.0096 _pdbx_refine_tls.T[1][3] -0.0452 _pdbx_refine_tls.T[2][3] 0.0325 _pdbx_refine_tls.L[1][1] 0.5417 _pdbx_refine_tls.L[2][2] 1.4368 _pdbx_refine_tls.L[3][3] 1.0519 _pdbx_refine_tls.L[1][2] -0.0767 _pdbx_refine_tls.L[1][3] -0.3697 _pdbx_refine_tls.L[2][3] -0.4912 _pdbx_refine_tls.S[1][1] -0.0248 _pdbx_refine_tls.S[2][2] 0.1046 _pdbx_refine_tls.S[3][3] -0.0797 _pdbx_refine_tls.S[1][2] -0.0402 _pdbx_refine_tls.S[1][3] -0.0101 _pdbx_refine_tls.S[2][3] 0.1861 _pdbx_refine_tls.S[2][1] 0.1184 _pdbx_refine_tls.S[3][1] 0.0158 _pdbx_refine_tls.S[3][2] -0.0368 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 31 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 339 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.5.0110 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SOLVE . ? program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 SCALA 3.3.15 2009/03/31 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 7 # _pdbx_entry_details.entry_id 3NQK _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT (22-339) WAS EXPRESSED WITH A N-TERMINAL PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 22 TO 339 OF THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 54 ? ? -107.30 -110.07 2 1 ASN A 56 ? ? 59.47 8.74 3 1 SER A 97 ? ? 78.05 164.36 4 1 ASP A 153 ? ? -160.32 119.13 5 1 ALA A 158 ? ? 70.26 -100.06 6 1 TYR A 159 ? ? 69.50 72.07 7 1 ASP A 231 ? ? -33.53 127.53 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN 56 ? CG ? A ASN 36 CG 2 1 Y 1 A ASN 56 ? OD1 ? A ASN 36 OD1 3 1 Y 1 A ASN 56 ? ND2 ? A ASN 36 ND2 4 1 Y 1 A LYS 58 ? CE ? A LYS 38 CE 5 1 Y 1 A LYS 58 ? NZ ? A LYS 38 NZ 6 1 Y 1 A SER 70 ? OG ? A SER 50 OG 7 1 Y 1 A LYS 85 ? CE ? A LYS 65 CE 8 1 Y 1 A LYS 85 ? NZ ? A LYS 65 NZ 9 1 Y 1 A ARG 95 ? CZ ? A ARG 75 CZ 10 1 Y 1 A ARG 95 ? NH1 ? A ARG 75 NH1 11 1 Y 1 A ARG 95 ? NH2 ? A ARG 75 NH2 12 1 Y 1 A GLN 160 ? CG ? A GLN 140 CG 13 1 Y 1 A GLN 160 ? CD ? A GLN 140 CD 14 1 Y 1 A GLN 160 ? OE1 ? A GLN 140 OE1 15 1 Y 1 A GLN 160 ? NE2 ? A GLN 140 NE2 16 1 Y 1 A LYS 165 ? CG ? A LYS 145 CG 17 1 Y 1 A LYS 165 ? CD ? A LYS 145 CD 18 1 Y 1 A LYS 165 ? CE ? A LYS 145 CE 19 1 Y 1 A LYS 165 ? NZ ? A LYS 145 NZ 20 1 Y 1 A LYS 198 ? CE ? A LYS 178 CE 21 1 Y 1 A LYS 198 ? NZ ? A LYS 178 NZ 22 1 Y 1 A LYS 236 ? NZ ? A LYS 216 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 21 ? A GLY 1 2 1 Y 1 A ASN 22 ? A ASN 2 3 1 Y 1 A GLU 23 ? A GLU 3 4 1 Y 1 A TRP 24 ? A TRP 4 5 1 Y 1 A GLU 25 ? A GLU 5 6 1 Y 1 A ASP 26 ? A ASP 6 7 1 Y 1 A GLU 27 ? A GLU 7 8 1 Y 1 A GLN 28 ? A GLN 8 9 1 Y 1 A TYR 29 ? A TYR 9 10 1 Y 1 A GLU 30 ? A GLU 10 11 1 Y 1 A SER 161 ? A SER 141 12 1 Y 1 A HIS 162 ? A HIS 142 13 1 Y 1 A PRO 163 ? A PRO 143 14 1 Y 1 A ARG 164 ? A ARG 144 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 water HOH #