HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 30-JUN-10 3NRF TITLE CRYSTAL STRUCTURE OF AN APAG PROTEIN (PA1934) FROM PSEUDOMONAS TITLE 2 AERUGINOSA PAO1 AT 1.50 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: APAG PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: PA1934; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI-2, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 01-FEB-23 3NRF 1 REMARK SEQADV REVDAT 5 17-JUL-19 3NRF 1 REMARK LINK REVDAT 4 08-NOV-17 3NRF 1 REMARK REVDAT 3 16-NOV-11 3NRF 1 TITLE REVDAT 2 20-JUL-11 3NRF 1 HEADER REVDAT 1 28-JUL-10 3NRF 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF AN APAG PROTEIN (PA1934) FROM JRNL TITL 2 PSEUDOMONAS AERUGINOSA AT 1.50 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0110 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 32812 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1666 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2229 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.65 REMARK 3 BIN R VALUE (WORKING SET) : 0.2740 REMARK 3 BIN FREE R VALUE SET COUNT : 108 REMARK 3 BIN FREE R VALUE : 0.3100 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1508 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 29 REMARK 3 SOLVENT ATOMS : 212 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.85 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.21000 REMARK 3 B22 (A**2) : -0.52000 REMARK 3 B33 (A**2) : -0.68000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.084 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.062 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.387 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1706 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1155 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2341 ; 1.697 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2837 ; 0.895 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 250 ; 4.317 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 80 ;31.772 ;24.250 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 297 ; 9.911 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;11.653 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 274 ; 0.107 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1988 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 352 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1091 ; 3.608 ;35.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 445 ; 2.687 ;35.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1761 ; 4.366 ; 8.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 615 ; 3.637 ;11.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 558 ; 4.053 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 25 A 126 REMARK 3 ORIGIN FOR THE GROUP (A): 30.4095 13.1912 27.0536 REMARK 3 T TENSOR REMARK 3 T11: 0.0394 T22: 0.0594 REMARK 3 T33: 0.0592 T12: 0.0081 REMARK 3 T13: -0.0203 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 1.8374 L22: 1.1659 REMARK 3 L33: 0.5640 L12: 0.5720 REMARK 3 L13: -0.2835 L23: -0.1165 REMARK 3 S TENSOR REMARK 3 S11: 0.0537 S12: 0.0926 S13: -0.0781 REMARK 3 S21: -0.0764 S22: -0.0348 S23: 0.0551 REMARK 3 S31: -0.0278 S32: -0.0539 S33: -0.0189 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 23 B 125 REMARK 3 ORIGIN FOR THE GROUP (A): 14.9751 13.3357 51.5627 REMARK 3 T TENSOR REMARK 3 T11: 0.0726 T22: 0.0472 REMARK 3 T33: 0.0647 T12: 0.0119 REMARK 3 T13: -0.0175 T23: -0.0028 REMARK 3 L TENSOR REMARK 3 L11: 0.6488 L22: 1.0837 REMARK 3 L33: 1.7229 L12: 0.1956 REMARK 3 L13: -0.2165 L23: 0.2822 REMARK 3 S TENSOR REMARK 3 S11: 0.1137 S12: -0.0855 S13: -0.0644 REMARK 3 S21: 0.1987 S22: -0.0088 S23: 0.1332 REMARK 3 S31: 0.1206 S32: -0.0389 S33: -0.1049 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. ATOM RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL B FACTORS. 3. ANISOU RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL U FACTORS. 4. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 5.(4R)-2-METHYL- 2,4-PENTANEDIOL (MRD),AND REMARK 3 CACODYLATE (CAC) FROM THE CRYSTALLIZATION WERE MODELED INTO THE REMARK 3 STRUCTURE. THE MODELING OF CACODYLATE IS SUPPORTED BY ANOMALOUS REMARK 3 DIFFERENCE MAPS. 5. SOLVENT MOLECULES WERE EXCLUDED FROM THE REMARK 3 ASSIGNMENT OF THE TLS GROUPS. REMARK 4 REMARK 4 3NRF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1000060186. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAY-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837,0.97936,0.97922 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : FLAT COLLIMATING MIRROR, TOROID REMARK 200 FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.15 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32823 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 29.178 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09800 REMARK 200 FOR THE DATA SET : 8.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.79800 REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40.000000000% MPD, 5.000000000% PEG REMARK 280 -8000, 0.1M CACODYLATE PH 6.5, NANODROP, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.89400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 30.89400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 34.67150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.24550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 34.67150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.24550 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 30.89400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 34.67150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 48.24550 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 30.89400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 34.67150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 48.24550 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A REMARK 300 TETRAMER AS A SIGNIFICANT OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 69.34300 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 92.68200 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 ALA A 22 REMARK 465 ALA A 23 REMARK 465 PRO A 24 REMARK 465 GLY B 0 REMARK 465 ALA B 22 REMARK 465 LYS B 126 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 25 CG OD1 OD2 REMARK 470 LYS A 60 CG CD CE NZ REMARK 470 LYS A 126 CG CD CE NZ REMARK 470 ARG B 32 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 25 48.30 -82.37 REMARK 500 ASP B 110 -157.64 -100.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD A 128 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD B 127 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD B 129 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CAC B 130 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 416839 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT (RESIDUES 22-126) WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE DBREF 3NRF A 22 126 UNP Q9I2H0 Q9I2H0_PSEAE 22 126 DBREF 3NRF B 22 126 UNP Q9I2H0 Q9I2H0_PSEAE 22 126 SEQADV 3NRF GLY A 0 UNP Q9I2H0 EXPRESSION TAG SEQADV 3NRF GLY B 0 UNP Q9I2H0 EXPRESSION TAG SEQRES 1 A 106 GLY ALA ALA PRO ASP ALA VAL MSE VAL PHE ALA ARG GLN SEQRES 2 A 106 GLY ASP LYS GLY SER VAL SER VAL GLY ASP LYS HIS PHE SEQRES 3 A 106 ARG THR GLN ALA PHE LYS VAL ARG LEU VAL ASN ALA ALA SEQRES 4 A 106 LYS SER GLU ILE SER LEU LYS ASN SER CYS LEU VAL ALA SEQRES 5 A 106 GLN SER ALA ALA GLY GLN SER PHE ARG LEU ASP THR VAL SEQRES 6 A 106 ASP GLU GLU LEU THR ALA ASP THR LEU LYS PRO GLY ALA SEQRES 7 A 106 SER VAL GLU GLY ASP ALA ILE PHE ALA SER GLU ASP ASP SEQRES 8 A 106 ALA VAL TYR GLY ALA SER LEU VAL ARG LEU SER ASP ARG SEQRES 9 A 106 CYS LYS SEQRES 1 B 106 GLY ALA ALA PRO ASP ALA VAL MSE VAL PHE ALA ARG GLN SEQRES 2 B 106 GLY ASP LYS GLY SER VAL SER VAL GLY ASP LYS HIS PHE SEQRES 3 B 106 ARG THR GLN ALA PHE LYS VAL ARG LEU VAL ASN ALA ALA SEQRES 4 B 106 LYS SER GLU ILE SER LEU LYS ASN SER CYS LEU VAL ALA SEQRES 5 B 106 GLN SER ALA ALA GLY GLN SER PHE ARG LEU ASP THR VAL SEQRES 6 B 106 ASP GLU GLU LEU THR ALA ASP THR LEU LYS PRO GLY ALA SEQRES 7 B 106 SER VAL GLU GLY ASP ALA ILE PHE ALA SER GLU ASP ASP SEQRES 8 B 106 ALA VAL TYR GLY ALA SER LEU VAL ARG LEU SER ASP ARG SEQRES 9 B 106 CYS LYS MODRES 3NRF MSE A 28 MET SELENOMETHIONINE MODRES 3NRF MSE B 28 MET SELENOMETHIONINE HET MSE A 28 8 HET MSE B 28 8 HET MRD A 128 8 HET MRD B 127 8 HET MRD B 129 8 HET CAC B 130 5 HETNAM MSE SELENOMETHIONINE HETNAM MRD (4R)-2-METHYLPENTANE-2,4-DIOL HETNAM CAC CACODYLATE ION HETSYN CAC DIMETHYLARSINATE FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 3 MRD 3(C6 H14 O2) FORMUL 6 CAC C2 H6 AS O2 1- FORMUL 7 HOH *212(H2 O) HELIX 1 1 GLU A 87 ALA A 91 5 5 HELIX 2 2 ASP A 111 TYR A 114 5 4 HELIX 3 3 GLU B 87 ALA B 91 5 5 HELIX 4 4 ASP B 111 ALA B 116 5 6 SHEET 1 A12 ALA A 116 SER A 122 0 SHEET 2 A12 CYS A 69 SER A 74 -1 N CYS A 69 O SER A 122 SHEET 3 A12 SER A 79 VAL A 85 -1 O PHE A 80 N ALA A 72 SHEET 4 A12 SER A 99 SER A 108 -1 O ILE A 105 N ASP A 83 SHEET 5 A12 LYS A 44 VAL A 56 -1 N ARG A 47 O SER A 108 SHEET 6 A12 MSE A 28 VAL A 41 -1 N VAL A 41 O LYS A 44 SHEET 7 A12 VAL B 27 VAL B 41 -1 O SER B 40 N VAL A 29 SHEET 8 A12 LYS B 44 ASN B 57 -1 O ALA B 50 N GLY B 34 SHEET 9 A12 SER B 99 SER B 108 -1 O SER B 108 N ARG B 47 SHEET 10 A12 SER B 79 VAL B 85 -1 N THR B 84 O ILE B 105 SHEET 11 A12 CYS B 69 GLN B 73 -1 N ALA B 72 O PHE B 80 SHEET 12 A12 LEU B 118 SER B 122 -1 O ARG B 120 N VAL B 71 SHEET 1 B 2 ILE A 63 SER A 64 0 SHEET 2 B 2 THR A 93 LEU A 94 -1 O LEU A 94 N ILE A 63 SHEET 1 C 2 ILE B 63 SER B 64 0 SHEET 2 C 2 THR B 93 LEU B 94 -1 O LEU B 94 N ILE B 63 SSBOND 1 CYS A 69 CYS A 125 1555 1555 2.08 SSBOND 2 CYS B 69 CYS B 125 1555 1555 2.04 LINK C VAL A 27 N MSE A 28 1555 1555 1.33 LINK C MSE A 28 N VAL A 29 1555 1555 1.32 LINK C VAL B 27 N MSE B 28 1555 1555 1.32 LINK C MSE B 28 N VAL B 29 1555 1555 1.32 SITE 1 AC1 4 PHE A 30 ARG A 32 LYS A 52 GLU A 101 SITE 1 AC2 2 LYS B 52 GLU B 101 SITE 1 AC3 3 THR B 84 VAL B 85 ASP B 86 SITE 1 AC4 9 ARG A 120 SER A 122 ARG A 124 HOH A 311 SITE 2 AC4 9 GLN B 73 SER B 79 ARG B 120 SER B 122 SITE 3 AC4 9 HOH B 310 CRYST1 69.343 96.491 61.788 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014421 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010364 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016184 0.00000