HEADER OXIDOREDUCTASE 02-JUL-10 3NT0 TITLE C500S (T1D) MUTANT OF CUEO SOAKED IN AND BOUND TO CU(I) COMPND MOL_ID: 1; COMPND 2 MOLECULE: BLUE COPPER OXIDASE CUEO; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: B0123, CUEO, CUEO (YACK), JW0119, YACK; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PASK-IBA3 KEYWDS MULTICOPPER OXIDASE, COPPER(I), C500S MUTANT, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR S.A.ROBERTS,W.R.MONTFORT,S.K.SINGH REVDAT 4 06-SEP-23 3NT0 1 REMARK SEQADV LINK REVDAT 3 29-NOV-17 3NT0 1 JRNL REVDAT 2 08-NOV-17 3NT0 1 REMARK REVDAT 1 17-AUG-11 3NT0 0 JRNL AUTH S.K.SINGH,S.A.ROBERTS,S.F.MCDEVITT,A.WEICHSEL,G.F.WILDNER, JRNL AUTH 2 G.B.GRASS,C.RENSING,W.R.MONTFORT JRNL TITL CRYSTAL STRUCTURES OF MULTICOPPER OXIDASE CUEO BOUND TO JRNL TITL 2 COPPER(I) AND SILVER(I): FUNCTIONAL ROLE OF A JRNL TITL 3 METHIONINE-RICH SEQUENCE. JRNL REF J. BIOL. CHEM. V. 286 37849 2011 JRNL REFN ESSN 1083-351X JRNL PMID 21903583 JRNL DOI 10.1074/JBC.M111.293589 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 93.4 REMARK 3 NUMBER OF REFLECTIONS : 40340 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2159 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3032 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.69 REMARK 3 BIN R VALUE (WORKING SET) : 0.2720 REMARK 3 BIN FREE R VALUE SET COUNT : 168 REMARK 3 BIN FREE R VALUE : 0.3110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3595 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 13 REMARK 3 SOLVENT ATOMS : 386 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.49000 REMARK 3 B22 (A**2) : -0.56000 REMARK 3 B33 (A**2) : -0.31000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.86000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.156 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.088 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.762 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.924 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.880 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3805 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2548 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5185 ; 1.466 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6267 ; 1.166 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 492 ; 6.405 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 161 ;36.669 ;24.658 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 640 ;14.440 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;20.278 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 569 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4300 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 714 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2403 ; 0.797 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 973 ; 0.193 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3888 ; 1.426 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1402 ; 2.212 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1296 ; 3.575 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3NT0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1000060242. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-APR-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : .9002 REMARK 200 MONOCHROMATOR : UNKNOWN REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR REMARK 200 DATA SCALING SOFTWARE : CRYSTALCLEAR REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42528 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 20.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.15000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.33000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: UNNECESSARY REMARK 200 SOFTWARE USED: UNNECESSARY REMARK 200 STARTING MODEL: 1KV7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% POLYETHYLENE GLYCOL 4000, 0.2 M REMARK 280 AMMONIUM ACETATE, 0.1 M SODIUM ACETATE, PH 4.6; , VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 46.25350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 29 REMARK 465 MET A 379 REMARK 465 ASP A 380 REMARK 465 HIS A 381 REMARK 465 SER A 382 REMARK 465 GLN A 383 REMARK 465 MET A 384 REMARK 465 MET A 385 REMARK 465 GLY A 386 REMARK 465 HIS A 387 REMARK 465 MET A 388 REMARK 465 GLY A 389 REMARK 465 HIS A 390 REMARK 465 GLY A 391 REMARK 465 ASN A 392 REMARK 465 MET A 393 REMARK 465 ASN A 394 REMARK 465 HIS A 395 REMARK 465 MET A 396 REMARK 465 ASN A 397 REMARK 465 HIS A 398 REMARK 465 GLY A 399 REMARK 465 GLY A 400 REMARK 465 LYS A 401 REMARK 465 PHE A 402 REMARK 465 GLY A 522 REMARK 465 LEU A 523 REMARK 465 SER A 524 REMARK 465 ALA A 525 REMARK 465 TRP A 526 REMARK 465 SER A 527 REMARK 465 HIS A 528 REMARK 465 PRO A 529 REMARK 465 GLN A 530 REMARK 465 PHE A 531 REMARK 465 GLU A 532 REMARK 465 LYS A 533 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 74 -131.47 57.06 REMARK 500 HIS A 143 31.01 -140.40 REMARK 500 LYS A 174 24.43 -149.20 REMARK 500 LYS A 174 23.13 -147.50 REMARK 500 ILE A 178 -70.85 -117.06 REMARK 500 ALA A 241 -22.01 -144.67 REMARK 500 SER A 259 -165.14 -114.51 REMARK 500 ALA A 308 135.82 -37.96 REMARK 500 SER A 335 -167.60 -161.59 REMARK 500 PHE A 415 126.46 -39.38 REMARK 500 GLU A 476 89.16 -155.16 REMARK 500 LEU A 517 -54.44 -137.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 A 601 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 101 NE2 REMARK 620 2 HIS A 446 NE2 165.6 REMARK 620 3 ACT A 610 O 99.7 94.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 A 602 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 103 ND1 REMARK 620 2 HIS A 141 NE2 133.3 REMARK 620 3 HIS A 501 NE2 108.2 112.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 A 603 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 143 NE2 REMARK 620 2 HIS A 448 NE2 106.4 REMARK 620 3 HIS A 499 NE2 109.5 122.4 REMARK 620 4 HOH A 901 O 98.5 119.6 97.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 A 608 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 145 ND1 REMARK 620 2 MET A 417 SD 124.2 REMARK 620 3 HOH A 730 O 116.2 98.5 REMARK 620 4 HOH A 788 O 104.6 107.3 104.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 A 604 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 355 SD REMARK 620 2 ASP A 360 OD1 94.3 REMARK 620 3 ASP A 360 OD2 140.0 51.1 REMARK 620 4 ASP A 439 OD2 104.6 117.3 80.6 REMARK 620 5 MET A 441 SD 115.1 105.2 95.4 118.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 A 605 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 358 SD REMARK 620 2 MET A 362 SD 100.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 A 609 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 361 SD REMARK 620 2 HOH A 881 O 119.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 A 606 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 364 SD REMARK 620 2 MET A 368 SD 101.2 REMARK 620 3 MET A 376 SD 108.6 102.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 A 607 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 488 ND1 REMARK 620 2 HOH A 892 O 144.4 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 A 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 A 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 A 609 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 610 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3NSC RELATED DB: PDB REMARK 900 RELATED ID: 3NSD RELATED DB: PDB REMARK 900 RELATED ID: 3NSF RELATED DB: PDB REMARK 900 RELATED ID: 3NSY RELATED DB: PDB DBREF 3NT0 A 29 516 UNP P36649 CUEO_ECOLI 29 516 SEQADV 3NT0 SER A 500 UNP P36649 CYS 500 ENGINEERED MUTATION SEQADV 3NT0 LEU A 517 UNP P36649 EXPRESSION TAG SEQADV 3NT0 GLN A 518 UNP P36649 EXPRESSION TAG SEQADV 3NT0 GLY A 519 UNP P36649 EXPRESSION TAG SEQADV 3NT0 ASP A 520 UNP P36649 EXPRESSION TAG SEQADV 3NT0 HIS A 521 UNP P36649 EXPRESSION TAG SEQADV 3NT0 GLY A 522 UNP P36649 EXPRESSION TAG SEQADV 3NT0 LEU A 523 UNP P36649 EXPRESSION TAG SEQADV 3NT0 SER A 524 UNP P36649 EXPRESSION TAG SEQADV 3NT0 ALA A 525 UNP P36649 EXPRESSION TAG SEQADV 3NT0 TRP A 526 UNP P36649 EXPRESSION TAG SEQADV 3NT0 SER A 527 UNP P36649 EXPRESSION TAG SEQADV 3NT0 HIS A 528 UNP P36649 EXPRESSION TAG SEQADV 3NT0 PRO A 529 UNP P36649 EXPRESSION TAG SEQADV 3NT0 GLN A 530 UNP P36649 EXPRESSION TAG SEQADV 3NT0 PHE A 531 UNP P36649 EXPRESSION TAG SEQADV 3NT0 GLU A 532 UNP P36649 EXPRESSION TAG SEQADV 3NT0 LYS A 533 UNP P36649 EXPRESSION TAG SEQRES 1 A 505 ALA GLU ARG PRO THR LEU PRO ILE PRO ASP LEU LEU THR SEQRES 2 A 505 THR ASP ALA ARG ASN ARG ILE GLN LEU THR ILE GLY ALA SEQRES 3 A 505 GLY GLN SER THR PHE GLY GLY LYS THR ALA THR THR TRP SEQRES 4 A 505 GLY TYR ASN GLY ASN LEU LEU GLY PRO ALA VAL LYS LEU SEQRES 5 A 505 GLN ARG GLY LYS ALA VAL THR VAL ASP ILE TYR ASN GLN SEQRES 6 A 505 LEU THR GLU GLU THR THR LEU HIS TRP HIS GLY LEU GLU SEQRES 7 A 505 VAL PRO GLY GLU VAL ASP GLY GLY PRO GLN GLY ILE ILE SEQRES 8 A 505 PRO PRO GLY GLY LYS ARG SER VAL THR LEU ASN VAL ASP SEQRES 9 A 505 GLN PRO ALA ALA THR CYS TRP PHE HIS PRO HIS GLN HIS SEQRES 10 A 505 GLY LYS THR GLY ARG GLN VAL ALA MET GLY LEU ALA GLY SEQRES 11 A 505 LEU VAL VAL ILE GLU ASP ASP GLU ILE LEU LYS LEU MET SEQRES 12 A 505 LEU PRO LYS GLN TRP GLY ILE ASP ASP VAL PRO VAL ILE SEQRES 13 A 505 VAL GLN ASP LYS LYS PHE SER ALA ASP GLY GLN ILE ASP SEQRES 14 A 505 TYR GLN LEU ASP VAL MET THR ALA ALA VAL GLY TRP PHE SEQRES 15 A 505 GLY ASP THR LEU LEU THR ASN GLY ALA ILE TYR PRO GLN SEQRES 16 A 505 HIS ALA ALA PRO ARG GLY TRP LEU ARG LEU ARG LEU LEU SEQRES 17 A 505 ASN GLY CYS ASN ALA ARG SER LEU ASN PHE ALA THR SER SEQRES 18 A 505 ASP ASN ARG PRO LEU TYR VAL ILE ALA SER ASP GLY GLY SEQRES 19 A 505 LEU LEU PRO GLU PRO VAL LYS VAL SER GLU LEU PRO VAL SEQRES 20 A 505 LEU MET GLY GLU ARG PHE GLU VAL LEU VAL GLU VAL ASN SEQRES 21 A 505 ASP ASN LYS PRO PHE ASP LEU VAL THR LEU PRO VAL SER SEQRES 22 A 505 GLN MET GLY MET ALA ILE ALA PRO PHE ASP LYS PRO HIS SEQRES 23 A 505 PRO VAL MET ARG ILE GLN PRO ILE ALA ILE SER ALA SER SEQRES 24 A 505 GLY ALA LEU PRO ASP THR LEU SER SER LEU PRO ALA LEU SEQRES 25 A 505 PRO SER LEU GLU GLY LEU THR VAL ARG LYS LEU GLN LEU SEQRES 26 A 505 SER MET ASP PRO MET LEU ASP MET MET GLY MET GLN MET SEQRES 27 A 505 LEU MET GLU LYS TYR GLY ASP GLN ALA MET ALA GLY MET SEQRES 28 A 505 ASP HIS SER GLN MET MET GLY HIS MET GLY HIS GLY ASN SEQRES 29 A 505 MET ASN HIS MET ASN HIS GLY GLY LYS PHE ASP PHE HIS SEQRES 30 A 505 HIS ALA ASN LYS ILE ASN GLY GLN ALA PHE ASP MET ASN SEQRES 31 A 505 LYS PRO MET PHE ALA ALA ALA LYS GLY GLN TYR GLU ARG SEQRES 32 A 505 TRP VAL ILE SER GLY VAL GLY ASP MET MET LEU HIS PRO SEQRES 33 A 505 PHE HIS ILE HIS GLY THR GLN PHE ARG ILE LEU SER GLU SEQRES 34 A 505 ASN GLY LYS PRO PRO ALA ALA HIS ARG ALA GLY TRP LYS SEQRES 35 A 505 ASP THR VAL LYS VAL GLU GLY ASN VAL SER GLU VAL LEU SEQRES 36 A 505 VAL LYS PHE ASN HIS ASP ALA PRO LYS GLU HIS ALA TYR SEQRES 37 A 505 MET ALA HIS SER HIS LEU LEU GLU HIS GLU ASP THR GLY SEQRES 38 A 505 MET MET LEU GLY PHE THR VAL LEU GLN GLY ASP HIS GLY SEQRES 39 A 505 LEU SER ALA TRP SER HIS PRO GLN PHE GLU LYS HET CU1 A 601 1 HET CU1 A 602 1 HET CU1 A 603 1 HET CU1 A 604 1 HET CU1 A 605 1 HET CU1 A 606 1 HET CU1 A 607 1 HET CU1 A 608 1 HET CU1 A 609 1 HET ACT A 610 4 HETNAM CU1 COPPER (I) ION HETNAM ACT ACETATE ION FORMUL 2 CU1 9(CU 1+) FORMUL 11 ACT C2 H3 O2 1- FORMUL 12 HOH *386(H2 O) HELIX 1 1 PRO A 108 GLY A 113 1 6 HELIX 2 2 LYS A 147 GLY A 155 1 9 HELIX 3 3 ASP A 164 LYS A 169 1 6 HELIX 4 4 ASP A 201 GLY A 208 1 8 HELIX 5 5 ASP A 356 GLY A 372 1 17 HELIX 6 6 ASP A 373 ALA A 377 5 5 HELIX 7 7 ALA A 463 ALA A 467 5 5 HELIX 8 8 PRO A 491 ALA A 495 5 5 HELIX 9 9 LEU A 502 THR A 508 1 7 SHEET 1 A 5 LEU A 39 LEU A 40 0 SHEET 2 A 5 ALA A 77 GLN A 81 1 O LYS A 79 N LEU A 40 SHEET 3 A 5 GLY A 158 GLU A 163 1 O VAL A 161 N VAL A 78 SHEET 4 A 5 ALA A 136 HIS A 141 -1 N PHE A 140 O GLY A 158 SHEET 5 A 5 HIS A 101 HIS A 103 -1 N HIS A 101 O HIS A 141 SHEET 1 B 4 LYS A 62 TYR A 69 0 SHEET 2 B 4 ARG A 47 PHE A 59 -1 N GLY A 55 O THR A 66 SHEET 3 B 4 ALA A 85 ASN A 92 1 O TYR A 91 N ILE A 52 SHEET 4 B 4 LYS A 124 ASN A 130 -1 O VAL A 127 N VAL A 88 SHEET 1 C 6 THR A 213 THR A 216 0 SHEET 2 C 6 ASP A 180 LYS A 188 -1 N GLN A 186 O LEU A 215 SHEET 3 C 6 GLY A 229 ASN A 237 1 O ARG A 234 N VAL A 183 SHEET 4 C 6 ARG A 280 VAL A 287 -1 O VAL A 287 N GLY A 229 SHEET 5 C 6 LEU A 254 SER A 259 -1 N ILE A 257 O GLU A 282 SHEET 6 C 6 GLY A 262 VAL A 270 -1 O VAL A 270 N LEU A 254 SHEET 1 D 5 GLN A 223 PRO A 227 0 SHEET 2 D 5 HIS A 314 ILE A 322 1 O ARG A 318 N HIS A 224 SHEET 3 D 5 PHE A 293 THR A 297 -1 N PHE A 293 O ILE A 319 SHEET 4 D 5 LEU A 244 THR A 248 -1 N ALA A 247 O VAL A 296 SHEET 5 D 5 LEU A 273 VAL A 275 -1 O VAL A 275 N LEU A 244 SHEET 1 E 5 ASN A 408 ILE A 410 0 SHEET 2 E 5 THR A 347 MET A 355 -1 N SER A 354 O LYS A 409 SHEET 3 E 5 GLU A 430 SER A 435 1 O VAL A 433 N LEU A 351 SHEET 4 E 5 VAL A 479 VAL A 484 -1 O SER A 480 N ILE A 434 SHEET 5 E 5 ARG A 453 SER A 456 -1 N ARG A 453 O LEU A 483 SHEET 1 F 5 PHE A 422 ALA A 424 0 SHEET 2 F 5 MET A 511 VAL A 516 1 O THR A 515 N ALA A 424 SHEET 3 F 5 TYR A 496 SER A 500 -1 N TYR A 496 O PHE A 514 SHEET 4 F 5 HIS A 443 ILE A 447 -1 N HIS A 446 O HIS A 499 SHEET 5 F 5 THR A 472 VAL A 475 -1 O VAL A 473 N PHE A 445 LINK NE2 HIS A 101 CU CU1 A 601 1555 1555 2.00 LINK ND1 HIS A 103 CU CU1 A 602 1555 1555 2.00 LINK NE2 HIS A 141 CU CU1 A 602 1555 1555 2.14 LINK NE2 HIS A 143 CU CU1 A 603 1555 1555 2.07 LINK ND1 HIS A 145 CU CU1 A 608 1555 1555 2.15 LINK SD MET A 355 CU CU1 A 604 1555 1555 2.25 LINK SD MET A 358 CU CU1 A 605 1555 1555 2.16 LINK OD1 ASP A 360 CU CU1 A 604 1555 1555 2.35 LINK OD2 ASP A 360 CU CU1 A 604 1555 1555 2.62 LINK SD MET A 361 CU CU1 A 609 1555 1555 2.18 LINK SD MET A 362 CU CU1 A 605 1555 1555 2.68 LINK SD AMET A 364 CU CU1 A 606 1555 1555 2.39 LINK SD MET A 368 CU CU1 A 606 1555 1555 2.62 LINK SD MET A 376 CU CU1 A 606 1555 1555 2.38 LINK SD MET A 417 CU CU1 A 608 1555 1555 2.37 LINK OD2 ASP A 439 CU CU1 A 604 1555 1555 2.20 LINK SD MET A 441 CU CU1 A 604 1555 1555 2.25 LINK NE2 HIS A 446 CU CU1 A 601 1555 1555 2.04 LINK NE2 HIS A 448 CU CU1 A 603 1555 1555 2.04 LINK ND1 HIS A 488 CU CU1 A 607 1555 1555 2.09 LINK NE2 HIS A 499 CU CU1 A 603 1555 1555 2.16 LINK NE2 HIS A 501 CU CU1 A 602 1555 1555 2.23 LINK CU CU1 A 601 O ACT A 610 1555 1555 2.33 LINK CU CU1 A 603 O HOH A 901 1555 1555 1.89 LINK CU CU1 A 607 O HOH A 892 1555 1555 2.31 LINK CU CU1 A 608 O HOH A 730 1555 1555 2.25 LINK CU CU1 A 608 O HOH A 788 1555 1555 2.57 LINK CU CU1 A 609 O HOH A 881 1555 1555 2.49 CISPEP 1 ALA A 308 PRO A 309 0 2.75 SITE 1 AC1 5 HIS A 101 HIS A 103 HIS A 446 HIS A 448 SITE 2 AC1 5 ACT A 610 SITE 1 AC2 4 HIS A 103 HIS A 141 HIS A 501 HOH A 901 SITE 1 AC3 4 HIS A 143 HIS A 448 HIS A 499 HOH A 901 SITE 1 AC4 4 MET A 355 ASP A 360 ASP A 439 MET A 441 SITE 1 AC5 3 MET A 358 MET A 362 HOH A 872 SITE 1 AC6 3 MET A 364 MET A 368 MET A 376 SITE 1 AC7 2 HIS A 488 HOH A 892 SITE 1 AC8 4 HIS A 145 MET A 417 HOH A 730 HOH A 788 SITE 1 AC9 2 MET A 361 HOH A 881 SITE 1 BC1 10 HIS A 101 HIS A 103 GLY A 104 LEU A 105 SITE 2 BC1 10 ASP A 112 HIS A 446 HIS A 448 GLY A 449 SITE 3 BC1 10 THR A 450 CU1 A 601 CRYST1 50.861 92.507 54.330 90.00 102.47 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019661 0.000000 0.004348 0.00000 SCALE2 0.000000 0.010810 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018851 0.00000