HEADER OXIDOREDUCTASE 03-JUL-10 3NTD TITLE STRUCTURE OF THE SHEWANELLA LOIHICA PV-4 NADH-DEPENDENT PERSULFIDE TITLE 2 REDUCTASE C531S MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAD-DEPENDENT PYRIDINE NUCLEOTIDE-DISULPHIDE COMPND 3 OXIDOREDUCTASE; COMPND 4 CHAIN: A, B; COMPND 5 EC: 1.8.1.14; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHEWANELLA LOIHICA; SOURCE 3 ORGANISM_TAXID: 323850; SOURCE 4 STRAIN: ATCC BAA-1088 / PV-4; SOURCE 5 GENE: SHEW_0729; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PET21B+ KEYWDS FAD, COA, PERSULFIDE REDUCTASE, RHODANESE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.H.SAZINSKY,M.D.WARNER,V.LUKOSE,K.H.LEE,E.J.CRANE REVDAT 3 06-SEP-23 3NTD 1 REMARK SEQADV REVDAT 2 22-FEB-12 3NTD 1 JRNL VERSN REVDAT 1 08-DEC-10 3NTD 0 JRNL AUTH M.D.WARNER,V.LUKOSE,K.H.LEE,K.LOPEZ,M.H SAZINSKY,E.J.CRANE JRNL TITL CHARACTERIZATION OF AN NADH-DEPENDENT PERSULFIDE REDUCTASE JRNL TITL 2 FROM SHEWANELLA LOIHICA PV-4: IMPLICATIONS FOR THE MECHANISM JRNL TITL 3 OF SULFUR RESPIRATION VIA FAD-DEPENDENT ENZYMES . JRNL REF BIOCHEMISTRY V. 50 194 2010 JRNL REFN ISSN 0006-2960 JRNL PMID 21090815 JRNL DOI 10.1021/BI101232Y REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 115.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 103268 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 5538 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.99 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.04 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7179 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.12 REMARK 3 BIN R VALUE (WORKING SET) : 0.2130 REMARK 3 BIN FREE R VALUE SET COUNT : 386 REMARK 3 BIN FREE R VALUE : 0.2820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8589 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 204 REMARK 3 SOLVENT ATOMS : 607 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -22.26000 REMARK 3 B22 (A**2) : -22.26000 REMARK 3 B33 (A**2) : 44.51000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.025 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.024 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.142 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.411 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8923 ; 0.029 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 12117 ; 2.353 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1125 ; 7.486 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 397 ;37.331 ;24.433 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1480 ;17.636 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 62 ;20.574 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1368 ; 0.186 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6708 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5572 ; 1.434 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8919 ; 2.202 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3351 ; 3.909 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3198 ; 5.531 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 3 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.026 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : K, H, -L REMARK 3 TWIN FRACTION : 0.323 REMARK 3 TWIN DOMAIN : 3 REMARK 3 TWIN OPERATOR : -H,-K,L REMARK 3 TWIN FRACTION : 0.651 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 36 REMARK 3 ORIGIN FOR THE GROUP (A): 54.2813 -10.7332 38.7706 REMARK 3 T TENSOR REMARK 3 T11: 0.1927 T22: 0.1903 REMARK 3 T33: 0.2027 T12: 0.0082 REMARK 3 T13: 0.0028 T23: -0.0131 REMARK 3 L TENSOR REMARK 3 L11: 0.8925 L22: 1.2129 REMARK 3 L33: 1.5993 L12: 0.9802 REMARK 3 L13: -0.5387 L23: -0.3748 REMARK 3 S TENSOR REMARK 3 S11: -0.0120 S12: -0.0141 S13: -0.0152 REMARK 3 S21: 0.0552 S22: -0.0202 S23: -0.1240 REMARK 3 S31: -0.0498 S32: 0.1219 S33: 0.0322 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 37 A 179 REMARK 3 ORIGIN FOR THE GROUP (A): 44.2844 -1.5250 24.1330 REMARK 3 T TENSOR REMARK 3 T11: 0.1880 T22: 0.1611 REMARK 3 T33: 0.1838 T12: -0.0039 REMARK 3 T13: 0.0109 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 0.8455 L22: 0.1652 REMARK 3 L33: 0.5813 L12: -0.1091 REMARK 3 L13: 0.5580 L23: -0.0250 REMARK 3 S TENSOR REMARK 3 S11: -0.0319 S12: 0.0080 S13: 0.0945 REMARK 3 S21: 0.0013 S22: -0.0005 S23: 0.0003 REMARK 3 S31: -0.0893 S32: -0.0138 S33: 0.0325 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 180 A 236 REMARK 3 ORIGIN FOR THE GROUP (A): 32.4005 -10.3216 2.3193 REMARK 3 T TENSOR REMARK 3 T11: 0.2243 T22: 0.2445 REMARK 3 T33: 0.2039 T12: 0.0081 REMARK 3 T13: -0.0115 T23: -0.0084 REMARK 3 L TENSOR REMARK 3 L11: 1.5941 L22: 1.4233 REMARK 3 L33: 1.1973 L12: 0.5186 REMARK 3 L13: -0.3558 L23: -0.3202 REMARK 3 S TENSOR REMARK 3 S11: -0.0054 S12: 0.0517 S13: 0.0918 REMARK 3 S21: -0.0340 S22: -0.0113 S23: -0.1015 REMARK 3 S31: -0.1019 S32: 0.1099 S33: 0.0166 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 245 A 306 REMARK 3 ORIGIN FOR THE GROUP (A): 51.8290 -9.9885 14.3563 REMARK 3 T TENSOR REMARK 3 T11: 0.2025 T22: 0.1937 REMARK 3 T33: 0.1975 T12: -0.0099 REMARK 3 T13: 0.0105 T23: -0.0130 REMARK 3 L TENSOR REMARK 3 L11: 0.9919 L22: 0.7963 REMARK 3 L33: 0.6549 L12: -0.6305 REMARK 3 L13: 0.5558 L23: -0.5648 REMARK 3 S TENSOR REMARK 3 S11: 0.0964 S12: 0.1728 S13: -0.0184 REMARK 3 S21: -0.1431 S22: -0.0782 S23: 0.0318 REMARK 3 S31: 0.1038 S32: 0.1143 S33: -0.0183 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 307 A 470 REMARK 3 ORIGIN FOR THE GROUP (A): 34.6796 -30.2377 17.4037 REMARK 3 T TENSOR REMARK 3 T11: 0.1755 T22: 0.1652 REMARK 3 T33: 0.1507 T12: 0.0081 REMARK 3 T13: -0.0022 T23: 0.0117 REMARK 3 L TENSOR REMARK 3 L11: 0.7344 L22: 0.9981 REMARK 3 L33: 0.5222 L12: 0.1899 REMARK 3 L13: -0.2413 L23: 0.1489 REMARK 3 S TENSOR REMARK 3 S11: 0.0205 S12: 0.0054 S13: -0.0333 REMARK 3 S21: 0.0280 S22: 0.0018 S23: -0.1236 REMARK 3 S31: 0.0009 S32: 0.0855 S33: -0.0224 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 471 A 561 REMARK 3 ORIGIN FOR THE GROUP (A): 19.1640 -39.4619 -5.9450 REMARK 3 T TENSOR REMARK 3 T11: 0.2057 T22: 0.2128 REMARK 3 T33: 0.2030 T12: 0.0036 REMARK 3 T13: 0.0044 T23: 0.0038 REMARK 3 L TENSOR REMARK 3 L11: 1.1489 L22: 1.4156 REMARK 3 L33: 1.2464 L12: 0.1779 REMARK 3 L13: 0.3177 L23: 0.1604 REMARK 3 S TENSOR REMARK 3 S11: -0.0072 S12: 0.2265 S13: 0.0182 REMARK 3 S21: -0.2469 S22: 0.0073 S23: 0.0236 REMARK 3 S31: -0.0357 S32: -0.0349 S33: -0.0001 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 124 REMARK 3 ORIGIN FOR THE GROUP (A): 5.7283 -51.8977 19.0332 REMARK 3 T TENSOR REMARK 3 T11: 0.1661 T22: 0.1801 REMARK 3 T33: 0.1779 T12: -0.0002 REMARK 3 T13: -0.0055 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 0.3172 L22: 0.4536 REMARK 3 L33: 0.5129 L12: -0.0429 REMARK 3 L13: -0.0791 L23: 0.2666 REMARK 3 S TENSOR REMARK 3 S11: -0.0020 S12: -0.0090 S13: -0.0240 REMARK 3 S21: 0.0134 S22: -0.0078 S23: 0.0841 REMARK 3 S31: 0.0273 S32: -0.0750 S33: 0.0099 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 125 B 183 REMARK 3 ORIGIN FOR THE GROUP (A): -0.4556 -34.7200 39.1289 REMARK 3 T TENSOR REMARK 3 T11: 0.1708 T22: 0.1624 REMARK 3 T33: 0.1693 T12: -0.0092 REMARK 3 T13: 0.0112 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 1.3690 L22: 0.8914 REMARK 3 L33: 1.5606 L12: -0.5110 REMARK 3 L13: 0.5624 L23: 0.5579 REMARK 3 S TENSOR REMARK 3 S11: 0.0014 S12: -0.1088 S13: 0.0027 REMARK 3 S21: 0.0734 S22: -0.0107 S23: 0.0665 REMARK 3 S31: -0.0015 S32: -0.1013 S33: 0.0093 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 184 B 254 REMARK 3 ORIGIN FOR THE GROUP (A): 8.3122 -32.9795 50.9583 REMARK 3 T TENSOR REMARK 3 T11: 0.2054 T22: 0.1833 REMARK 3 T33: 0.1665 T12: 0.0048 REMARK 3 T13: -0.0131 T23: -0.0130 REMARK 3 L TENSOR REMARK 3 L11: 2.1943 L22: 0.9376 REMARK 3 L33: 0.9390 L12: 0.2916 REMARK 3 L13: -0.7158 L23: -0.3359 REMARK 3 S TENSOR REMARK 3 S11: -0.0004 S12: -0.1012 S13: -0.0874 REMARK 3 S21: 0.1038 S22: -0.0044 S23: 0.1276 REMARK 3 S31: 0.0743 S32: -0.1099 S33: 0.0047 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 255 B 328 REMARK 3 ORIGIN FOR THE GROUP (A): 15.8328 -52.8700 32.8111 REMARK 3 T TENSOR REMARK 3 T11: 0.1972 T22: 0.2024 REMARK 3 T33: 0.1897 T12: -0.0022 REMARK 3 T13: -0.0025 T23: 0.0055 REMARK 3 L TENSOR REMARK 3 L11: 0.2359 L22: 0.5814 REMARK 3 L33: 0.1032 L12: -0.2756 REMARK 3 L13: -0.0710 L23: 0.1970 REMARK 3 S TENSOR REMARK 3 S11: -0.0346 S12: -0.0758 S13: -0.0340 REMARK 3 S21: 0.0826 S22: 0.0316 S23: -0.0291 REMARK 3 S31: 0.0539 S32: 0.0587 S33: 0.0030 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 329 B 456 REMARK 3 ORIGIN FOR THE GROUP (A): 30.2778 -33.0086 33.9073 REMARK 3 T TENSOR REMARK 3 T11: 0.0091 T22: 0.0198 REMARK 3 T33: 0.0119 T12: -0.0002 REMARK 3 T13: 0.0004 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 0.9978 L22: 0.8231 REMARK 3 L33: 0.6880 L12: -0.0311 REMARK 3 L13: 0.0395 L23: -0.1322 REMARK 3 S TENSOR REMARK 3 S11: -0.0060 S12: 0.0444 S13: -0.1004 REMARK 3 S21: -0.0138 S22: 0.0104 S23: -0.0199 REMARK 3 S31: 0.0785 S32: 0.0054 S33: -0.0044 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 457 B 564 REMARK 3 ORIGIN FOR THE GROUP (A): 39.5610 -20.3738 55.6884 REMARK 3 T TENSOR REMARK 3 T11: 0.1801 T22: 0.1719 REMARK 3 T33: 0.1776 T12: 0.0046 REMARK 3 T13: 0.0030 T23: 0.0130 REMARK 3 L TENSOR REMARK 3 L11: 1.3670 L22: 1.2655 REMARK 3 L33: 1.2676 L12: 0.2368 REMARK 3 L13: 0.2303 L23: 0.4360 REMARK 3 S TENSOR REMARK 3 S11: 0.0073 S12: -0.2287 S13: 0.0396 REMARK 3 S21: 0.2007 S22: -0.0038 S23: 0.0298 REMARK 3 S31: -0.0352 S32: -0.0312 S33: -0.0036 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3NTD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1000060255. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-FEB-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 103268 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 116.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09200 REMARK 200 FOR THE DATA SET : 15.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.41000 REMARK 200 FOR SHELL : 6.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3ICR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM NA ACETATE, 200 MM AMMONIUM REMARK 280 ACETATE, 5% PEG 8K, PH 4.7, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -63.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 176 CD CE NZ REMARK 470 MET B 1 CG SD CE REMARK 470 TYR B 558 OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 192 O ALA A 564 1.14 REMARK 500 SG CYS A 43 S1P COA A 901 1.92 REMARK 500 N ALA A 227 NE2 GLN A 238 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASN A 482 ND2 ASN B 482 1554 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 268 CB GLU A 268 CG 0.118 REMARK 500 GLN A 292 CB GLN A 292 CG -0.205 REMARK 500 GLU B 252 CG GLU B 252 CD 0.096 REMARK 500 GLU B 255 CB GLU B 255 CG 0.118 REMARK 500 ALA B 349 CA ALA B 349 CB 0.127 REMARK 500 GLU B 437 CG GLU B 437 CD 0.103 REMARK 500 ALA B 453 CA ALA B 453 CB 0.153 REMARK 500 TYR B 558 CD1 TYR B 558 CE1 0.109 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 34 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG A 34 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG A 86 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG B 34 NE - CZ - NH1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP B 191 CB - CG - OD1 ANGL. DEV. = -6.3 DEGREES REMARK 500 LEU B 209 CB - CG - CD2 ANGL. DEV. = 11.3 DEGREES REMARK 500 ARG B 422 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 VAL B 511 CB - CA - C ANGL. DEV. = -12.4 DEGREES REMARK 500 VAL B 511 CG1 - CB - CG2 ANGL. DEV. = 11.3 DEGREES REMARK 500 VAL B 533 CG1 - CB - CG2 ANGL. DEV. = 10.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 10 -131.28 -122.85 REMARK 500 PRO A 121 46.78 -79.97 REMARK 500 ARG A 134 -44.74 -132.09 REMARK 500 PHE A 354 -115.22 49.82 REMARK 500 ASN A 482 67.62 -113.84 REMARK 500 SER A 531 -158.20 -131.25 REMARK 500 VAL B 10 -125.48 -110.81 REMARK 500 ASN B 150 60.84 38.03 REMARK 500 LEU B 173 4.40 -69.73 REMARK 500 MET B 187 61.87 63.57 REMARK 500 THR B 293 -165.82 -65.15 REMARK 500 PHE B 354 -124.99 58.54 REMARK 500 ALA B 386 109.57 -41.04 REMARK 500 ASN B 482 -111.72 -71.45 REMARK 500 LEU B 483 132.44 85.24 REMARK 500 GLN B 499 -66.16 -26.68 REMARK 500 ASN B 500 0.87 -63.23 REMARK 500 SER B 531 -169.70 -126.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 474 ILE A 475 147.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 566 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 566 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD B 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE COA B 901 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3NTA RELATED DB: PDB REMARK 900 RELATED ID: 3NT6 RELATED DB: PDB DBREF 3NTD A 1 565 UNP A3QAV3 A3QAV3_SHELP 1 565 DBREF 3NTD B 1 565 UNP A3QAV3 A3QAV3_SHELP 1 565 SEQADV 3NTD SER A 531 UNP A3QAV3 CYS 531 ENGINEERED MUTATION SEQADV 3NTD SER B 531 UNP A3QAV3 CYS 531 ENGINEERED MUTATION SEQRES 1 A 565 MET LYS LYS ILE LEU ILE ILE GLY GLY VAL ALA GLY GLY SEQRES 2 A 565 ALA SER ALA ALA ALA ARG ALA ARG ARG LEU SER GLU THR SEQRES 3 A 565 ALA GLU ILE ILE MET PHE GLU ARG GLY GLU TYR VAL SER SEQRES 4 A 565 PHE ALA ASN CYS GLY LEU PRO TYR HIS ILE SER GLY GLU SEQRES 5 A 565 ILE ALA GLN ARG SER ALA LEU VAL LEU GLN THR PRO GLU SEQRES 6 A 565 SER PHE LYS ALA ARG PHE ASN VAL GLU VAL ARG VAL LYS SEQRES 7 A 565 HIS GLU VAL VAL ALA ILE ASP ARG ALA ALA LYS LEU VAL SEQRES 8 A 565 THR VAL ARG ARG LEU LEU ASP GLY SER GLU TYR GLN GLU SEQRES 9 A 565 SER TYR ASP THR LEU LEU LEU SER PRO GLY ALA ALA PRO SEQRES 10 A 565 ILE VAL PRO PRO ILE PRO GLY VAL ASP ASN PRO LEU THR SEQRES 11 A 565 HIS SER LEU ARG ASN ILE PRO ASP MET ASP ARG ILE LEU SEQRES 12 A 565 GLN THR ILE GLN MET ASN ASN VAL GLU HIS ALA THR VAL SEQRES 13 A 565 VAL GLY GLY GLY PHE ILE GLY LEU GLU MET MET GLU SER SEQRES 14 A 565 LEU HIS HIS LEU GLY ILE LYS THR THR LEU LEU GLU LEU SEQRES 15 A 565 ALA ASP GLN VAL MET THR PRO VAL ASP ARG GLU MET ALA SEQRES 16 A 565 GLY PHE ALA HIS GLN ALA ILE ARG ASP GLN GLY VAL ASP SEQRES 17 A 565 LEU ARG LEU GLY THR ALA LEU SER GLU VAL SER TYR GLN SEQRES 18 A 565 VAL GLN THR HIS VAL ALA SER ASP ALA ALA GLY GLU ASP SEQRES 19 A 565 THR ALA HIS GLN HIS ILE LYS GLY HIS LEU SER LEU THR SEQRES 20 A 565 LEU SER ASN GLY GLU LEU LEU GLU THR ASP LEU LEU ILE SEQRES 21 A 565 MET ALA ILE GLY VAL ARG PRO GLU THR GLN LEU ALA ARG SEQRES 22 A 565 ASP ALA GLY LEU ALA ILE GLY GLU LEU GLY GLY ILE LYS SEQRES 23 A 565 VAL ASN ALA MET MET GLN THR SER ASP PRO ALA ILE TYR SEQRES 24 A 565 ALA VAL GLY ASP ALA VAL GLU GLU GLN ASP PHE VAL THR SEQRES 25 A 565 GLY GLN ALA CYS LEU VAL PRO LEU ALA GLY PRO ALA ASN SEQRES 26 A 565 ARG GLN GLY ARG MET ALA ALA ASP ASN MET PHE GLY ARG SEQRES 27 A 565 GLU GLU ARG TYR GLN GLY THR GLN GLY THR ALA ILE CYS SEQRES 28 A 565 LYS VAL PHE ASP LEU ALA VAL GLY ALA THR GLY LYS ASN SEQRES 29 A 565 GLU LYS GLN LEU LYS GLN ALA GLY ILE ALA PHE GLU LYS SEQRES 30 A 565 VAL TYR VAL HIS THR ALA SER HIS ALA SER TYR TYR PRO SEQRES 31 A 565 GLY ALA GLU VAL VAL SER PHE LYS LEU LEU PHE ASP PRO SEQRES 32 A 565 VAL LYS GLY THR ILE PHE GLY ALA GLN ALA VAL GLY LYS SEQRES 33 A 565 ASP GLY ILE ASP LYS ARG ILE ASP VAL MET ALA VAL ALA SEQRES 34 A 565 GLN ARG ALA GLY MET THR VAL GLU GLN LEU GLN HIS LEU SEQRES 35 A 565 GLU LEU SER TYR ALA PRO PRO TYR GLY SER ALA LYS ASP SEQRES 36 A 565 VAL ILE ASN GLN ALA ALA PHE VAL ALA SER ASN ILE ILE SEQRES 37 A 565 LYS GLY ASP ALA THR PRO ILE HIS PHE ASP GLN ILE ASP SEQRES 38 A 565 ASN LEU SER GLU ASP GLN LEU LEU LEU ASP VAL ARG ASN SEQRES 39 A 565 PRO GLY GLU LEU GLN ASN GLY GLY LEU GLU GLY ALA VAL SEQRES 40 A 565 ASN ILE PRO VAL ASP GLU LEU ARG ASP ARG MET HIS GLU SEQRES 41 A 565 LEU PRO LYS ASP LYS GLU ILE ILE ILE PHE SER GLN VAL SEQRES 42 A 565 GLY LEU ARG GLY ASN VAL ALA TYR ARG GLN LEU VAL ASN SEQRES 43 A 565 ASN GLY TYR ARG ALA ARG ASN LEU ILE GLY GLY TYR ARG SEQRES 44 A 565 THR TYR LYS PHE ALA SER SEQRES 1 B 565 MET LYS LYS ILE LEU ILE ILE GLY GLY VAL ALA GLY GLY SEQRES 2 B 565 ALA SER ALA ALA ALA ARG ALA ARG ARG LEU SER GLU THR SEQRES 3 B 565 ALA GLU ILE ILE MET PHE GLU ARG GLY GLU TYR VAL SER SEQRES 4 B 565 PHE ALA ASN CYS GLY LEU PRO TYR HIS ILE SER GLY GLU SEQRES 5 B 565 ILE ALA GLN ARG SER ALA LEU VAL LEU GLN THR PRO GLU SEQRES 6 B 565 SER PHE LYS ALA ARG PHE ASN VAL GLU VAL ARG VAL LYS SEQRES 7 B 565 HIS GLU VAL VAL ALA ILE ASP ARG ALA ALA LYS LEU VAL SEQRES 8 B 565 THR VAL ARG ARG LEU LEU ASP GLY SER GLU TYR GLN GLU SEQRES 9 B 565 SER TYR ASP THR LEU LEU LEU SER PRO GLY ALA ALA PRO SEQRES 10 B 565 ILE VAL PRO PRO ILE PRO GLY VAL ASP ASN PRO LEU THR SEQRES 11 B 565 HIS SER LEU ARG ASN ILE PRO ASP MET ASP ARG ILE LEU SEQRES 12 B 565 GLN THR ILE GLN MET ASN ASN VAL GLU HIS ALA THR VAL SEQRES 13 B 565 VAL GLY GLY GLY PHE ILE GLY LEU GLU MET MET GLU SER SEQRES 14 B 565 LEU HIS HIS LEU GLY ILE LYS THR THR LEU LEU GLU LEU SEQRES 15 B 565 ALA ASP GLN VAL MET THR PRO VAL ASP ARG GLU MET ALA SEQRES 16 B 565 GLY PHE ALA HIS GLN ALA ILE ARG ASP GLN GLY VAL ASP SEQRES 17 B 565 LEU ARG LEU GLY THR ALA LEU SER GLU VAL SER TYR GLN SEQRES 18 B 565 VAL GLN THR HIS VAL ALA SER ASP ALA ALA GLY GLU ASP SEQRES 19 B 565 THR ALA HIS GLN HIS ILE LYS GLY HIS LEU SER LEU THR SEQRES 20 B 565 LEU SER ASN GLY GLU LEU LEU GLU THR ASP LEU LEU ILE SEQRES 21 B 565 MET ALA ILE GLY VAL ARG PRO GLU THR GLN LEU ALA ARG SEQRES 22 B 565 ASP ALA GLY LEU ALA ILE GLY GLU LEU GLY GLY ILE LYS SEQRES 23 B 565 VAL ASN ALA MET MET GLN THR SER ASP PRO ALA ILE TYR SEQRES 24 B 565 ALA VAL GLY ASP ALA VAL GLU GLU GLN ASP PHE VAL THR SEQRES 25 B 565 GLY GLN ALA CYS LEU VAL PRO LEU ALA GLY PRO ALA ASN SEQRES 26 B 565 ARG GLN GLY ARG MET ALA ALA ASP ASN MET PHE GLY ARG SEQRES 27 B 565 GLU GLU ARG TYR GLN GLY THR GLN GLY THR ALA ILE CYS SEQRES 28 B 565 LYS VAL PHE ASP LEU ALA VAL GLY ALA THR GLY LYS ASN SEQRES 29 B 565 GLU LYS GLN LEU LYS GLN ALA GLY ILE ALA PHE GLU LYS SEQRES 30 B 565 VAL TYR VAL HIS THR ALA SER HIS ALA SER TYR TYR PRO SEQRES 31 B 565 GLY ALA GLU VAL VAL SER PHE LYS LEU LEU PHE ASP PRO SEQRES 32 B 565 VAL LYS GLY THR ILE PHE GLY ALA GLN ALA VAL GLY LYS SEQRES 33 B 565 ASP GLY ILE ASP LYS ARG ILE ASP VAL MET ALA VAL ALA SEQRES 34 B 565 GLN ARG ALA GLY MET THR VAL GLU GLN LEU GLN HIS LEU SEQRES 35 B 565 GLU LEU SER TYR ALA PRO PRO TYR GLY SER ALA LYS ASP SEQRES 36 B 565 VAL ILE ASN GLN ALA ALA PHE VAL ALA SER ASN ILE ILE SEQRES 37 B 565 LYS GLY ASP ALA THR PRO ILE HIS PHE ASP GLN ILE ASP SEQRES 38 B 565 ASN LEU SER GLU ASP GLN LEU LEU LEU ASP VAL ARG ASN SEQRES 39 B 565 PRO GLY GLU LEU GLN ASN GLY GLY LEU GLU GLY ALA VAL SEQRES 40 B 565 ASN ILE PRO VAL ASP GLU LEU ARG ASP ARG MET HIS GLU SEQRES 41 B 565 LEU PRO LYS ASP LYS GLU ILE ILE ILE PHE SER GLN VAL SEQRES 42 B 565 GLY LEU ARG GLY ASN VAL ALA TYR ARG GLN LEU VAL ASN SEQRES 43 B 565 ASN GLY TYR ARG ALA ARG ASN LEU ILE GLY GLY TYR ARG SEQRES 44 B 565 THR TYR LYS PHE ALA SER HET COA A 901 48 HET CL A 566 1 HET FAD A 900 53 HET CL B 566 1 HET FAD B 900 53 HET COA B 901 48 HETNAM COA COENZYME A HETNAM CL CHLORIDE ION HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE FORMUL 3 COA 2(C21 H36 N7 O16 P3 S) FORMUL 4 CL 2(CL 1-) FORMUL 5 FAD 2(C27 H33 N9 O15 P2) FORMUL 9 HOH *607(H2 O) HELIX 1 1 VAL A 10 SER A 24 1 15 HELIX 2 2 ALA A 41 CYS A 43 5 3 HELIX 3 3 GLY A 44 SER A 50 1 7 HELIX 4 4 GLN A 55 VAL A 60 5 6 HELIX 5 5 THR A 63 ASN A 72 1 10 HELIX 6 6 ASN A 135 ASN A 149 1 15 HELIX 7 7 GLY A 160 LEU A 173 1 14 HELIX 8 8 ASP A 191 GLN A 205 1 15 HELIX 9 9 SER A 228 GLY A 232 5 5 HELIX 10 10 THR A 269 GLY A 276 1 8 HELIX 11 11 GLY A 302 VAL A 305 5 4 HELIX 12 12 LEU A 320 PHE A 336 1 17 HELIX 13 13 ASN A 364 ALA A 371 1 8 HELIX 14 14 GLY A 418 ALA A 432 1 15 HELIX 15 15 THR A 435 GLN A 440 1 6 HELIX 16 16 ASP A 455 LYS A 469 1 15 HELIX 17 17 ASN A 494 GLY A 501 5 8 HELIX 18 18 PRO A 510 LEU A 514 5 5 HELIX 19 19 ARG A 517 LEU A 521 5 5 HELIX 20 20 GLY A 534 ASN A 547 1 14 HELIX 21 21 GLY A 556 ALA A 564 1 9 HELIX 22 22 GLY B 12 SER B 24 1 13 HELIX 23 23 ALA B 41 CYS B 43 5 3 HELIX 24 24 GLY B 44 SER B 50 1 7 HELIX 25 25 GLN B 55 VAL B 60 5 6 HELIX 26 26 THR B 63 ASN B 72 1 10 HELIX 27 27 ASN B 135 ASN B 149 1 15 HELIX 28 28 GLY B 160 LEU B 173 1 14 HELIX 29 29 ASP B 191 GLN B 205 1 15 HELIX 30 30 THR B 269 GLY B 276 1 8 HELIX 31 31 GLY B 302 VAL B 305 5 4 HELIX 32 32 LEU B 320 PHE B 336 1 17 HELIX 33 33 ASN B 364 ALA B 371 1 8 HELIX 34 34 GLY B 418 ALA B 432 1 15 HELIX 35 35 THR B 435 GLN B 440 1 6 HELIX 36 36 ASP B 455 LYS B 469 1 15 HELIX 37 37 ASN B 494 GLN B 499 1 6 HELIX 38 38 PRO B 510 MET B 518 1 9 HELIX 39 39 HIS B 519 LEU B 521 5 3 HELIX 40 40 GLY B 534 ASN B 546 1 13 HELIX 41 41 GLY B 556 SER B 565 1 10 SHEET 1 A 5 GLU A 74 ARG A 76 0 SHEET 2 A 5 GLU A 28 PHE A 32 1 N MET A 31 O ARG A 76 SHEET 3 A 5 LYS A 3 ILE A 7 1 N ILE A 4 O GLU A 28 SHEET 4 A 5 THR A 108 LEU A 111 1 O LEU A 110 N ILE A 7 SHEET 5 A 5 ILE A 298 ALA A 300 1 O TYR A 299 N LEU A 109 SHEET 1 B 3 HIS A 79 ASP A 85 0 SHEET 2 B 3 LEU A 90 ARG A 95 -1 O LEU A 90 N ASP A 85 SHEET 3 B 3 GLU A 101 SER A 105 -1 O TYR A 102 N VAL A 93 SHEET 1 C 2 ALA A 115 PRO A 117 0 SHEET 2 C 2 VAL A 265 PRO A 267 -1 O ARG A 266 N ALA A 116 SHEET 1 D 5 THR A 130 HIS A 131 0 SHEET 2 D 5 LEU A 258 MET A 261 1 O MET A 261 N HIS A 131 SHEET 3 D 5 HIS A 153 VAL A 157 1 N THR A 155 O ILE A 260 SHEET 4 D 5 LYS A 176 GLU A 181 1 O THR A 178 N VAL A 156 SHEET 5 D 5 ASP A 208 LEU A 211 1 O ARG A 210 N LEU A 179 SHEET 1 E 3 LEU A 215 GLN A 221 0 SHEET 2 E 3 HIS A 243 LEU A 248 -1 O THR A 247 N GLU A 217 SHEET 3 E 3 LEU A 253 THR A 256 -1 O LEU A 254 N LEU A 246 SHEET 1 F 2 GLU A 307 GLN A 308 0 SHEET 2 F 2 ALA A 315 CYS A 316 -1 O CYS A 316 N GLU A 307 SHEET 1 G 5 ALA A 349 VAL A 353 0 SHEET 2 G 5 LEU A 356 GLY A 362 -1 O LEU A 356 N VAL A 353 SHEET 3 G 5 ILE A 408 GLY A 415 -1 O ALA A 413 N GLY A 359 SHEET 4 G 5 VAL A 394 PHE A 401 -1 N LYS A 398 O GLN A 412 SHEET 5 G 5 GLU A 376 ALA A 383 -1 N GLU A 376 O PHE A 401 SHEET 1 H 5 PRO A 474 ILE A 475 0 SHEET 2 H 5 ALA A 551 LEU A 554 1 O ASN A 553 N ILE A 475 SHEET 3 H 5 GLU A 526 PHE A 530 1 N ILE A 529 O ARG A 552 SHEET 4 H 5 GLN A 487 ASP A 491 1 N LEU A 488 O ILE A 528 SHEET 5 H 5 VAL A 507 ASN A 508 1 O VAL A 507 N ASP A 491 SHEET 1 I 5 GLU B 74 ARG B 76 0 SHEET 2 I 5 GLU B 28 PHE B 32 1 N MET B 31 O ARG B 76 SHEET 3 I 5 LYS B 3 ILE B 7 1 N ILE B 4 O GLU B 28 SHEET 4 I 5 THR B 108 LEU B 111 1 O LEU B 110 N ILE B 7 SHEET 5 I 5 ILE B 298 ALA B 300 1 O TYR B 299 N LEU B 109 SHEET 1 J 3 HIS B 79 ASP B 85 0 SHEET 2 J 3 LEU B 90 ARG B 95 -1 O ARG B 94 N GLU B 80 SHEET 3 J 3 GLU B 101 SER B 105 -1 O GLU B 104 N VAL B 91 SHEET 1 K 2 ALA B 115 PRO B 117 0 SHEET 2 K 2 VAL B 265 PRO B 267 -1 O ARG B 266 N ALA B 116 SHEET 1 L 5 THR B 130 HIS B 131 0 SHEET 2 L 5 LEU B 258 MET B 261 1 O MET B 261 N HIS B 131 SHEET 3 L 5 HIS B 153 VAL B 157 1 N THR B 155 O ILE B 260 SHEET 4 L 5 LYS B 176 LEU B 180 1 O THR B 178 N VAL B 156 SHEET 5 L 5 ASP B 208 ARG B 210 1 O ARG B 210 N LEU B 179 SHEET 1 M 3 LEU B 215 GLN B 221 0 SHEET 2 M 3 HIS B 243 LEU B 248 -1 O THR B 247 N GLU B 217 SHEET 3 M 3 LEU B 253 THR B 256 -1 O LEU B 254 N LEU B 246 SHEET 1 N 2 GLU B 307 GLN B 308 0 SHEET 2 N 2 ALA B 315 CYS B 316 -1 O CYS B 316 N GLU B 307 SHEET 1 O 5 ALA B 349 VAL B 353 0 SHEET 2 O 5 LEU B 356 GLY B 362 -1 O LEU B 356 N VAL B 353 SHEET 3 O 5 ILE B 408 GLY B 415 -1 O ALA B 413 N GLY B 359 SHEET 4 O 5 VAL B 394 PHE B 401 -1 N LYS B 398 O GLN B 412 SHEET 5 O 5 GLU B 376 ALA B 383 -1 N VAL B 378 O LEU B 399 SHEET 1 P 5 PRO B 474 ILE B 475 0 SHEET 2 P 5 ALA B 551 LEU B 554 1 O ASN B 553 N ILE B 475 SHEET 3 P 5 GLU B 526 PHE B 530 1 N ILE B 529 O LEU B 554 SHEET 4 P 5 GLN B 487 ASP B 491 1 N LEU B 488 O ILE B 528 SHEET 5 P 5 VAL B 507 ASN B 508 1 O VAL B 507 N ASP B 491 SITE 1 AC1 30 ALA A 11 ALA A 14 ARG A 19 ARG A 22 SITE 2 AC1 30 SER A 39 PHE A 40 ASN A 42 CYS A 43 SITE 3 AC1 30 ALA A 321 ASN A 325 ARG A 329 HOH A 636 SITE 4 AC1 30 HOH A 638 HOH A 655 HOH A 659 HOH A 711 SITE 5 AC1 30 HOH A 792 FAD A 900 HOH A 948 TYR B 446 SITE 6 AC1 30 LYS B 454 GLN B 459 PHE B 462 VAL B 463 SITE 7 AC1 30 ASN B 466 VAL B 533 GLY B 534 LEU B 535 SITE 8 AC1 30 ASN B 538 HOH B 708 SITE 1 AC2 6 ALA A 231 SER A 531 GLN A 532 VAL A 533 SITE 2 AC2 6 LEU A 535 ARG A 536 SITE 1 AC3 35 GLY A 8 VAL A 10 ALA A 11 GLY A 12 SITE 2 AC3 35 GLU A 33 ARG A 34 ASN A 42 CYS A 43 SITE 3 AC3 35 HIS A 79 GLU A 80 VAL A 81 SER A 112 SITE 4 AC3 35 PRO A 113 GLY A 114 LEU A 133 ARG A 134 SITE 5 AC3 35 PHE A 161 ILE A 162 GLY A 302 ASP A 303 SITE 6 AC3 35 PRO A 319 LEU A 320 ALA A 321 HOH A 597 SITE 7 AC3 35 HOH A 606 HOH A 631 HOH A 665 HOH A 669 SITE 8 AC3 35 HOH A 695 HOH A 719 HOH A 857 COA A 901 SITE 9 AC3 35 TYR B 446 ALA B 447 PRO B 448 SITE 1 AC4 6 ALA B 231 SER B 531 GLN B 532 VAL B 533 SITE 2 AC4 6 LEU B 535 ARG B 536 SITE 1 AC5 37 TYR A 446 ALA A 447 PRO A 448 ILE B 7 SITE 2 AC5 37 GLY B 8 VAL B 10 ALA B 11 GLY B 12 SITE 3 AC5 37 GLU B 33 ARG B 34 ASN B 42 CYS B 43 SITE 4 AC5 37 HIS B 79 GLU B 80 VAL B 81 SER B 112 SITE 5 AC5 37 PRO B 113 GLY B 114 LEU B 133 ARG B 134 SITE 6 AC5 37 PHE B 161 ILE B 162 LEU B 271 GLY B 302 SITE 7 AC5 37 ASP B 303 PRO B 319 LEU B 320 ALA B 321 SITE 8 AC5 37 HOH B 574 HOH B 575 HOH B 585 HOH B 598 SITE 9 AC5 37 HOH B 610 HOH B 639 HOH B 657 HOH B 683 SITE 10 AC5 37 HOH B 763 SITE 1 AC6 35 TYR A 446 LYS A 454 GLN A 459 PHE A 462 SITE 2 AC6 35 VAL A 463 ASN A 466 VAL A 533 GLY A 534 SITE 3 AC6 35 LEU A 535 ASN A 538 HOH A 613 HOH A 637 SITE 4 AC6 35 HOH A 663 VAL B 10 ALA B 11 ALA B 14 SITE 5 AC6 35 SER B 15 ALA B 18 ARG B 19 ARG B 22 SITE 6 AC6 35 SER B 39 PHE B 40 ASN B 42 CYS B 43 SITE 7 AC6 35 GLN B 62 ALA B 321 ASN B 325 ARG B 329 SITE 8 AC6 35 HOH B 650 HOH B 651 HOH B 653 HOH B 840 SITE 9 AC6 35 HOH B 876 HOH B 961 HOH B1091 CRYST1 133.737 133.737 79.713 90.00 90.00 120.00 P 3 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007477 0.004317 0.000000 0.00000 SCALE2 0.000000 0.008634 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012545 0.00000