data_3NTO # _entry.id 3NTO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3NTO pdb_00003nto 10.2210/pdb3nto/pdb RCSB RCSB060266 ? ? WWPDB D_1000060266 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-09-15 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 4 'Structure model' 1 3 2023-12-27 5 'Structure model' 1 4 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site 7 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 3NTO _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-07-05 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3MZ0 apo-IDH unspecified PDB 3NT2 'IDH with bound cofactor' unspecified PDB 3NT4 'IDH with bound cofactor and inositol' unspecified PDB 3NT5 'IDH with bound cofactor and inosose' unspecified PDB 3NTQ 'K97V mutant IDH with bound cofactor' unspecified PDB 3NTR 'K97V mutant IDH with bound cofactor and inositol' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Van Straaten, K.E.' 1 'Palmer, D.R.J.' 2 'Sanders, D.A.R.' 3 # _citation.id primary _citation.title ;Structural investigation of myo-inositol dehydrogenase from Bacillus subtilis: implications for catalytic mechanism and inositol dehydrogenase subfamily classification. ; _citation.journal_abbrev Biochem.J. _citation.journal_volume 432 _citation.page_first 237 _citation.page_last 247 _citation.year 2010 _citation.journal_id_ASTM BIJOAK _citation.country UK _citation.journal_id_ISSN 0264-6021 _citation.journal_id_CSD 0043 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20809899 _citation.pdbx_database_id_DOI 10.1042/BJ20101079 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'van Straaten, K.E.' 1 ? primary 'Zheng, H.' 2 ? primary 'Palmer, D.R.' 3 ? primary 'Sanders, D.A.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase' 38364.488 1 1.1.1.18 K97V ? ? 2 non-polymer syn '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 238.305 1 ? ? ? ? 3 water nat water 18.015 352 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Myo-inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase, MI 2-dehydrogenase/DCI 3-dehydrogenase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAHE SSVLKAIKAQKYVFCEVPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEALDNHVIGEPLMIHCAHRNPTV GDNYTTDMAVVDTLVHEIDVLHWLVNDDYESVQVIYPKKSKNALPHLKDPQIVVIETKGGIVINAEIYVNCKYGYDIQCE IVGEDGIIKLPEPSSISLRKEGRFSTDILMDWQRRFVAAYDVEIQDFIDSIQKKGEVSGPTAWDGYIAAVTTDACVKAQE SGQKEKVELKEKPEFYQSFTTVQN ; _entity_poly.pdbx_seq_one_letter_code_can ;MSLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAHE SSVLKAIKAQKYVFCEVPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEALDNHVIGEPLMIHCAHRNPTV GDNYTTDMAVVDTLVHEIDVLHWLVNDDYESVQVIYPKKSKNALPHLKDPQIVVIETKGGIVINAEIYVNCKYGYDIQCE IVGEDGIIKLPEPSSISLRKEGRFSTDILMDWQRRFVAAYDVEIQDFIDSIQKKGEVSGPTAWDGYIAAVTTDACVKAQE SGQKEKVELKEKPEFYQSFTTVQN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' EPE 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 LEU n 1 4 ARG n 1 5 ILE n 1 6 GLY n 1 7 VAL n 1 8 ILE n 1 9 GLY n 1 10 THR n 1 11 GLY n 1 12 ALA n 1 13 ILE n 1 14 GLY n 1 15 LYS n 1 16 GLU n 1 17 HIS n 1 18 ILE n 1 19 ASN n 1 20 ARG n 1 21 ILE n 1 22 THR n 1 23 ASN n 1 24 LYS n 1 25 LEU n 1 26 SER n 1 27 GLY n 1 28 ALA n 1 29 GLU n 1 30 ILE n 1 31 VAL n 1 32 ALA n 1 33 VAL n 1 34 THR n 1 35 ASP n 1 36 VAL n 1 37 ASN n 1 38 GLN n 1 39 GLU n 1 40 ALA n 1 41 ALA n 1 42 GLN n 1 43 LYS n 1 44 VAL n 1 45 VAL n 1 46 GLU n 1 47 GLN n 1 48 TYR n 1 49 GLN n 1 50 LEU n 1 51 ASN n 1 52 ALA n 1 53 THR n 1 54 VAL n 1 55 TYR n 1 56 PRO n 1 57 ASN n 1 58 ASP n 1 59 ASP n 1 60 SER n 1 61 LEU n 1 62 LEU n 1 63 ALA n 1 64 ASP n 1 65 GLU n 1 66 ASN n 1 67 VAL n 1 68 ASP n 1 69 ALA n 1 70 VAL n 1 71 LEU n 1 72 VAL n 1 73 THR n 1 74 SER n 1 75 TRP n 1 76 GLY n 1 77 PRO n 1 78 ALA n 1 79 HIS n 1 80 GLU n 1 81 SER n 1 82 SER n 1 83 VAL n 1 84 LEU n 1 85 LYS n 1 86 ALA n 1 87 ILE n 1 88 LYS n 1 89 ALA n 1 90 GLN n 1 91 LYS n 1 92 TYR n 1 93 VAL n 1 94 PHE n 1 95 CYS n 1 96 GLU n 1 97 VAL n 1 98 PRO n 1 99 LEU n 1 100 ALA n 1 101 THR n 1 102 THR n 1 103 ALA n 1 104 GLU n 1 105 GLY n 1 106 CYS n 1 107 MET n 1 108 ARG n 1 109 ILE n 1 110 VAL n 1 111 GLU n 1 112 GLU n 1 113 GLU n 1 114 ILE n 1 115 LYS n 1 116 VAL n 1 117 GLY n 1 118 LYS n 1 119 ARG n 1 120 LEU n 1 121 VAL n 1 122 GLN n 1 123 VAL n 1 124 GLY n 1 125 PHE n 1 126 MET n 1 127 ARG n 1 128 ARG n 1 129 TYR n 1 130 ASP n 1 131 SER n 1 132 GLY n 1 133 TYR n 1 134 VAL n 1 135 GLN n 1 136 LEU n 1 137 LYS n 1 138 GLU n 1 139 ALA n 1 140 LEU n 1 141 ASP n 1 142 ASN n 1 143 HIS n 1 144 VAL n 1 145 ILE n 1 146 GLY n 1 147 GLU n 1 148 PRO n 1 149 LEU n 1 150 MET n 1 151 ILE n 1 152 HIS n 1 153 CYS n 1 154 ALA n 1 155 HIS n 1 156 ARG n 1 157 ASN n 1 158 PRO n 1 159 THR n 1 160 VAL n 1 161 GLY n 1 162 ASP n 1 163 ASN n 1 164 TYR n 1 165 THR n 1 166 THR n 1 167 ASP n 1 168 MET n 1 169 ALA n 1 170 VAL n 1 171 VAL n 1 172 ASP n 1 173 THR n 1 174 LEU n 1 175 VAL n 1 176 HIS n 1 177 GLU n 1 178 ILE n 1 179 ASP n 1 180 VAL n 1 181 LEU n 1 182 HIS n 1 183 TRP n 1 184 LEU n 1 185 VAL n 1 186 ASN n 1 187 ASP n 1 188 ASP n 1 189 TYR n 1 190 GLU n 1 191 SER n 1 192 VAL n 1 193 GLN n 1 194 VAL n 1 195 ILE n 1 196 TYR n 1 197 PRO n 1 198 LYS n 1 199 LYS n 1 200 SER n 1 201 LYS n 1 202 ASN n 1 203 ALA n 1 204 LEU n 1 205 PRO n 1 206 HIS n 1 207 LEU n 1 208 LYS n 1 209 ASP n 1 210 PRO n 1 211 GLN n 1 212 ILE n 1 213 VAL n 1 214 VAL n 1 215 ILE n 1 216 GLU n 1 217 THR n 1 218 LYS n 1 219 GLY n 1 220 GLY n 1 221 ILE n 1 222 VAL n 1 223 ILE n 1 224 ASN n 1 225 ALA n 1 226 GLU n 1 227 ILE n 1 228 TYR n 1 229 VAL n 1 230 ASN n 1 231 CYS n 1 232 LYS n 1 233 TYR n 1 234 GLY n 1 235 TYR n 1 236 ASP n 1 237 ILE n 1 238 GLN n 1 239 CYS n 1 240 GLU n 1 241 ILE n 1 242 VAL n 1 243 GLY n 1 244 GLU n 1 245 ASP n 1 246 GLY n 1 247 ILE n 1 248 ILE n 1 249 LYS n 1 250 LEU n 1 251 PRO n 1 252 GLU n 1 253 PRO n 1 254 SER n 1 255 SER n 1 256 ILE n 1 257 SER n 1 258 LEU n 1 259 ARG n 1 260 LYS n 1 261 GLU n 1 262 GLY n 1 263 ARG n 1 264 PHE n 1 265 SER n 1 266 THR n 1 267 ASP n 1 268 ILE n 1 269 LEU n 1 270 MET n 1 271 ASP n 1 272 TRP n 1 273 GLN n 1 274 ARG n 1 275 ARG n 1 276 PHE n 1 277 VAL n 1 278 ALA n 1 279 ALA n 1 280 TYR n 1 281 ASP n 1 282 VAL n 1 283 GLU n 1 284 ILE n 1 285 GLN n 1 286 ASP n 1 287 PHE n 1 288 ILE n 1 289 ASP n 1 290 SER n 1 291 ILE n 1 292 GLN n 1 293 LYS n 1 294 LYS n 1 295 GLY n 1 296 GLU n 1 297 VAL n 1 298 SER n 1 299 GLY n 1 300 PRO n 1 301 THR n 1 302 ALA n 1 303 TRP n 1 304 ASP n 1 305 GLY n 1 306 TYR n 1 307 ILE n 1 308 ALA n 1 309 ALA n 1 310 VAL n 1 311 THR n 1 312 THR n 1 313 ASP n 1 314 ALA n 1 315 CYS n 1 316 VAL n 1 317 LYS n 1 318 ALA n 1 319 GLN n 1 320 GLU n 1 321 SER n 1 322 GLY n 1 323 GLN n 1 324 LYS n 1 325 GLU n 1 326 LYS n 1 327 VAL n 1 328 GLU n 1 329 LEU n 1 330 LYS n 1 331 GLU n 1 332 LYS n 1 333 PRO n 1 334 GLU n 1 335 PHE n 1 336 TYR n 1 337 GLN n 1 338 SER n 1 339 PHE n 1 340 THR n 1 341 THR n 1 342 VAL n 1 343 GLN n 1 344 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BSU39700, E83G, idh, iolG, NP_391849.2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus subtilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1423 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ROSETTA _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PHISTEV _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EPE non-polymer . '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' HEPES 'C8 H18 N2 O4 S' 238.305 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 LEU 3 3 3 LEU LEU A . n A 1 4 ARG 4 4 4 ARG ARG A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 HIS 17 17 17 HIS HIS A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 ASN 19 19 19 ASN ASN A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 GLN 38 38 38 GLN GLN A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 GLN 42 42 42 GLN GLN A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 GLN 47 47 47 GLN GLN A . n A 1 48 TYR 48 48 48 TYR TYR A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 THR 53 53 53 THR THR A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 TYR 55 55 55 TYR TYR A . n A 1 56 PRO 56 56 56 PRO PRO A . n A 1 57 ASN 57 57 57 ASN ASN A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 ASN 66 66 66 ASN ASN A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 VAL 70 70 70 VAL VAL A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 SER 74 74 74 SER SER A . n A 1 75 TRP 75 75 75 TRP TRP A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 HIS 79 79 79 HIS HIS A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 SER 82 82 82 SER SER A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 ILE 87 87 87 ILE ILE A . n A 1 88 LYS 88 88 88 LYS LYS A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 LYS 91 91 91 LYS LYS A . n A 1 92 TYR 92 92 92 TYR TYR A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 PHE 94 94 94 PHE PHE A . n A 1 95 CYS 95 95 95 CYS CYS A . n A 1 96 GLU 96 96 96 GLU GLU A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 PRO 98 98 98 PRO PRO A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 THR 102 102 102 THR THR A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 CYS 106 106 106 CYS CYS A . n A 1 107 MET 107 107 107 MET MET A . n A 1 108 ARG 108 108 108 ARG ARG A . n A 1 109 ILE 109 109 109 ILE ILE A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 GLU 112 112 112 GLU GLU A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 ILE 114 114 114 ILE ILE A . n A 1 115 LYS 115 115 115 LYS LYS A . n A 1 116 VAL 116 116 116 VAL VAL A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 LYS 118 118 118 LYS LYS A . n A 1 119 ARG 119 119 119 ARG ARG A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 VAL 121 121 121 VAL VAL A . n A 1 122 GLN 122 122 122 GLN GLN A . n A 1 123 VAL 123 123 123 VAL VAL A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 PHE 125 125 125 PHE PHE A . n A 1 126 MET 126 126 126 MET MET A . n A 1 127 ARG 127 127 127 ARG ARG A . n A 1 128 ARG 128 128 128 ARG ARG A . n A 1 129 TYR 129 129 129 TYR TYR A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 SER 131 131 131 SER SER A . n A 1 132 GLY 132 132 132 GLY GLY A . n A 1 133 TYR 133 133 133 TYR TYR A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 GLN 135 135 135 GLN GLN A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 LYS 137 137 137 LYS LYS A . n A 1 138 GLU 138 138 138 GLU GLU A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 ASP 141 141 141 ASP ASP A . n A 1 142 ASN 142 142 142 ASN ASN A . n A 1 143 HIS 143 143 143 HIS HIS A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 ILE 145 145 145 ILE ILE A . n A 1 146 GLY 146 146 146 GLY GLY A . n A 1 147 GLU 147 147 147 GLU GLU A . n A 1 148 PRO 148 148 148 PRO PRO A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 MET 150 150 150 MET MET A . n A 1 151 ILE 151 151 151 ILE ILE A . n A 1 152 HIS 152 152 152 HIS HIS A . n A 1 153 CYS 153 153 153 CYS CYS A . n A 1 154 ALA 154 154 154 ALA ALA A . n A 1 155 HIS 155 155 155 HIS HIS A . n A 1 156 ARG 156 156 156 ARG ARG A . n A 1 157 ASN 157 157 157 ASN ASN A . n A 1 158 PRO 158 158 158 PRO PRO A . n A 1 159 THR 159 159 159 THR THR A . n A 1 160 VAL 160 160 160 VAL VAL A . n A 1 161 GLY 161 161 161 GLY GLY A . n A 1 162 ASP 162 162 162 ASP ASP A . n A 1 163 ASN 163 163 163 ASN ASN A . n A 1 164 TYR 164 164 164 TYR TYR A . n A 1 165 THR 165 165 165 THR THR A . n A 1 166 THR 166 166 166 THR THR A . n A 1 167 ASP 167 167 167 ASP ASP A . n A 1 168 MET 168 168 168 MET MET A . n A 1 169 ALA 169 169 169 ALA ALA A . n A 1 170 VAL 170 170 170 VAL VAL A . n A 1 171 VAL 171 171 171 VAL VAL A . n A 1 172 ASP 172 172 172 ASP ASP A . n A 1 173 THR 173 173 173 THR THR A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 VAL 175 175 175 VAL VAL A . n A 1 176 HIS 176 176 176 HIS HIS A . n A 1 177 GLU 177 177 177 GLU GLU A . n A 1 178 ILE 178 178 178 ILE ILE A . n A 1 179 ASP 179 179 179 ASP ASP A . n A 1 180 VAL 180 180 180 VAL VAL A . n A 1 181 LEU 181 181 181 LEU LEU A . n A 1 182 HIS 182 182 182 HIS HIS A . n A 1 183 TRP 183 183 183 TRP TRP A . n A 1 184 LEU 184 184 184 LEU LEU A . n A 1 185 VAL 185 185 185 VAL VAL A . n A 1 186 ASN 186 186 186 ASN ASN A . n A 1 187 ASP 187 187 187 ASP ASP A . n A 1 188 ASP 188 188 188 ASP ASP A . n A 1 189 TYR 189 189 189 TYR TYR A . n A 1 190 GLU 190 190 190 GLU GLU A . n A 1 191 SER 191 191 191 SER SER A . n A 1 192 VAL 192 192 192 VAL VAL A . n A 1 193 GLN 193 193 193 GLN GLN A . n A 1 194 VAL 194 194 194 VAL VAL A . n A 1 195 ILE 195 195 195 ILE ILE A . n A 1 196 TYR 196 196 196 TYR TYR A . n A 1 197 PRO 197 197 197 PRO PRO A . n A 1 198 LYS 198 198 198 LYS LYS A . n A 1 199 LYS 199 199 199 LYS LYS A . n A 1 200 SER 200 200 200 SER SER A . n A 1 201 LYS 201 201 201 LYS LYS A . n A 1 202 ASN 202 202 202 ASN ASN A . n A 1 203 ALA 203 203 203 ALA ALA A . n A 1 204 LEU 204 204 204 LEU LEU A . n A 1 205 PRO 205 205 205 PRO PRO A . n A 1 206 HIS 206 206 206 HIS HIS A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 LYS 208 208 208 LYS LYS A . n A 1 209 ASP 209 209 209 ASP ASP A . n A 1 210 PRO 210 210 210 PRO PRO A . n A 1 211 GLN 211 211 211 GLN GLN A . n A 1 212 ILE 212 212 212 ILE ILE A . n A 1 213 VAL 213 213 213 VAL VAL A . n A 1 214 VAL 214 214 214 VAL VAL A . n A 1 215 ILE 215 215 215 ILE ILE A . n A 1 216 GLU 216 216 216 GLU GLU A . n A 1 217 THR 217 217 217 THR THR A . n A 1 218 LYS 218 218 218 LYS LYS A . n A 1 219 GLY 219 219 219 GLY GLY A . n A 1 220 GLY 220 220 220 GLY GLY A . n A 1 221 ILE 221 221 221 ILE ILE A . n A 1 222 VAL 222 222 222 VAL VAL A . n A 1 223 ILE 223 223 223 ILE ILE A . n A 1 224 ASN 224 224 224 ASN ASN A . n A 1 225 ALA 225 225 225 ALA ALA A . n A 1 226 GLU 226 226 226 GLU GLU A . n A 1 227 ILE 227 227 227 ILE ILE A . n A 1 228 TYR 228 228 228 TYR TYR A . n A 1 229 VAL 229 229 229 VAL VAL A . n A 1 230 ASN 230 230 230 ASN ASN A . n A 1 231 CYS 231 231 231 CYS CYS A . n A 1 232 LYS 232 232 232 LYS LYS A . n A 1 233 TYR 233 233 233 TYR TYR A . n A 1 234 GLY 234 234 234 GLY GLY A . n A 1 235 TYR 235 235 235 TYR TYR A . n A 1 236 ASP 236 236 236 ASP ASP A . n A 1 237 ILE 237 237 237 ILE ILE A . n A 1 238 GLN 238 238 238 GLN GLN A . n A 1 239 CYS 239 239 239 CYS CYS A . n A 1 240 GLU 240 240 240 GLU GLU A . n A 1 241 ILE 241 241 241 ILE ILE A . n A 1 242 VAL 242 242 242 VAL VAL A . n A 1 243 GLY 243 243 243 GLY GLY A . n A 1 244 GLU 244 244 244 GLU GLU A . n A 1 245 ASP 245 245 245 ASP ASP A . n A 1 246 GLY 246 246 246 GLY GLY A . n A 1 247 ILE 247 247 247 ILE ILE A . n A 1 248 ILE 248 248 248 ILE ILE A . n A 1 249 LYS 249 249 249 LYS LYS A . n A 1 250 LEU 250 250 250 LEU LEU A . n A 1 251 PRO 251 251 251 PRO PRO A . n A 1 252 GLU 252 252 252 GLU GLU A . n A 1 253 PRO 253 253 253 PRO PRO A . n A 1 254 SER 254 254 254 SER SER A . n A 1 255 SER 255 255 255 SER SER A . n A 1 256 ILE 256 256 256 ILE ILE A . n A 1 257 SER 257 257 257 SER SER A . n A 1 258 LEU 258 258 258 LEU LEU A . n A 1 259 ARG 259 259 259 ARG ARG A . n A 1 260 LYS 260 260 260 LYS LYS A . n A 1 261 GLU 261 261 261 GLU GLU A . n A 1 262 GLY 262 262 262 GLY GLY A . n A 1 263 ARG 263 263 263 ARG ARG A . n A 1 264 PHE 264 264 264 PHE PHE A . n A 1 265 SER 265 265 265 SER SER A . n A 1 266 THR 266 266 266 THR THR A . n A 1 267 ASP 267 267 267 ASP ASP A . n A 1 268 ILE 268 268 268 ILE ILE A . n A 1 269 LEU 269 269 269 LEU LEU A . n A 1 270 MET 270 270 270 MET MET A . n A 1 271 ASP 271 271 271 ASP ASP A . n A 1 272 TRP 272 272 272 TRP TRP A . n A 1 273 GLN 273 273 273 GLN GLN A . n A 1 274 ARG 274 274 274 ARG ARG A . n A 1 275 ARG 275 275 275 ARG ARG A . n A 1 276 PHE 276 276 276 PHE PHE A . n A 1 277 VAL 277 277 277 VAL VAL A . n A 1 278 ALA 278 278 278 ALA ALA A . n A 1 279 ALA 279 279 279 ALA ALA A . n A 1 280 TYR 280 280 280 TYR TYR A . n A 1 281 ASP 281 281 281 ASP ASP A . n A 1 282 VAL 282 282 282 VAL VAL A . n A 1 283 GLU 283 283 283 GLU GLU A . n A 1 284 ILE 284 284 284 ILE ILE A . n A 1 285 GLN 285 285 285 GLN GLN A . n A 1 286 ASP 286 286 286 ASP ASP A . n A 1 287 PHE 287 287 287 PHE PHE A . n A 1 288 ILE 288 288 288 ILE ILE A . n A 1 289 ASP 289 289 289 ASP ASP A . n A 1 290 SER 290 290 290 SER SER A . n A 1 291 ILE 291 291 291 ILE ILE A . n A 1 292 GLN 292 292 292 GLN GLN A . n A 1 293 LYS 293 293 293 LYS LYS A . n A 1 294 LYS 294 294 294 LYS LYS A . n A 1 295 GLY 295 295 295 GLY GLY A . n A 1 296 GLU 296 296 296 GLU GLU A . n A 1 297 VAL 297 297 297 VAL VAL A . n A 1 298 SER 298 298 298 SER SER A . n A 1 299 GLY 299 299 299 GLY GLY A . n A 1 300 PRO 300 300 300 PRO PRO A . n A 1 301 THR 301 301 301 THR THR A . n A 1 302 ALA 302 302 302 ALA ALA A . n A 1 303 TRP 303 303 303 TRP TRP A . n A 1 304 ASP 304 304 304 ASP ASP A . n A 1 305 GLY 305 305 305 GLY GLY A . n A 1 306 TYR 306 306 306 TYR TYR A . n A 1 307 ILE 307 307 307 ILE ILE A . n A 1 308 ALA 308 308 308 ALA ALA A . n A 1 309 ALA 309 309 309 ALA ALA A . n A 1 310 VAL 310 310 310 VAL VAL A . n A 1 311 THR 311 311 311 THR THR A . n A 1 312 THR 312 312 312 THR THR A . n A 1 313 ASP 313 313 313 ASP ASP A . n A 1 314 ALA 314 314 314 ALA ALA A . n A 1 315 CYS 315 315 315 CYS CYS A . n A 1 316 VAL 316 316 316 VAL VAL A . n A 1 317 LYS 317 317 317 LYS LYS A . n A 1 318 ALA 318 318 318 ALA ALA A . n A 1 319 GLN 319 319 319 GLN GLN A . n A 1 320 GLU 320 320 320 GLU GLU A . n A 1 321 SER 321 321 321 SER SER A . n A 1 322 GLY 322 322 322 GLY GLY A . n A 1 323 GLN 323 323 323 GLN GLN A . n A 1 324 LYS 324 324 324 LYS LYS A . n A 1 325 GLU 325 325 325 GLU GLU A . n A 1 326 LYS 326 326 326 LYS LYS A . n A 1 327 VAL 327 327 327 VAL VAL A . n A 1 328 GLU 328 328 328 GLU GLU A . n A 1 329 LEU 329 329 329 LEU LEU A . n A 1 330 LYS 330 330 330 LYS LYS A . n A 1 331 GLU 331 331 331 GLU GLU A . n A 1 332 LYS 332 332 332 LYS LYS A . n A 1 333 PRO 333 333 333 PRO PRO A . n A 1 334 GLU 334 334 334 GLU GLU A . n A 1 335 PHE 335 335 335 PHE PHE A . n A 1 336 TYR 336 336 336 TYR TYR A . n A 1 337 GLN 337 337 337 GLN GLN A . n A 1 338 SER 338 338 338 SER SER A . n A 1 339 PHE 339 339 ? ? ? A . n A 1 340 THR 340 340 ? ? ? A . n A 1 341 THR 341 341 ? ? ? A . n A 1 342 VAL 342 342 ? ? ? A . n A 1 343 GLN 343 343 ? ? ? A . n A 1 344 ASN 344 344 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EPE 1 401 401 EPE EPE A . C 3 HOH 1 345 345 HOH HOH A . C 3 HOH 2 346 346 HOH HOH A . C 3 HOH 3 347 347 HOH HOH A . C 3 HOH 4 348 348 HOH HOH A . C 3 HOH 5 349 349 HOH HOH A . C 3 HOH 6 350 350 HOH HOH A . C 3 HOH 7 351 351 HOH HOH A . C 3 HOH 8 352 1 HOH HOH A . C 3 HOH 9 353 353 HOH HOH A . C 3 HOH 10 354 354 HOH HOH A . C 3 HOH 11 355 355 HOH HOH A . C 3 HOH 12 356 356 HOH HOH A . C 3 HOH 13 357 357 HOH HOH A . C 3 HOH 14 358 358 HOH HOH A . C 3 HOH 15 359 359 HOH HOH A . C 3 HOH 16 360 360 HOH HOH A . C 3 HOH 17 361 2 HOH HOH A . C 3 HOH 18 362 3 HOH HOH A . C 3 HOH 19 363 4 HOH HOH A . C 3 HOH 20 364 5 HOH HOH A . C 3 HOH 21 365 6 HOH HOH A . C 3 HOH 22 366 7 HOH HOH A . C 3 HOH 23 367 8 HOH HOH A . C 3 HOH 24 368 9 HOH HOH A . C 3 HOH 25 369 10 HOH HOH A . C 3 HOH 26 370 11 HOH HOH A . C 3 HOH 27 371 12 HOH HOH A . C 3 HOH 28 372 13 HOH HOH A . C 3 HOH 29 373 14 HOH HOH A . C 3 HOH 30 374 15 HOH HOH A . C 3 HOH 31 375 16 HOH HOH A . C 3 HOH 32 376 17 HOH HOH A . C 3 HOH 33 377 18 HOH HOH A . C 3 HOH 34 378 19 HOH HOH A . C 3 HOH 35 379 20 HOH HOH A . C 3 HOH 36 380 21 HOH HOH A . C 3 HOH 37 381 22 HOH HOH A . C 3 HOH 38 382 23 HOH HOH A . C 3 HOH 39 383 24 HOH HOH A . C 3 HOH 40 384 25 HOH HOH A . C 3 HOH 41 385 26 HOH HOH A . C 3 HOH 42 386 27 HOH HOH A . C 3 HOH 43 387 28 HOH HOH A . C 3 HOH 44 388 29 HOH HOH A . C 3 HOH 45 389 30 HOH HOH A . C 3 HOH 46 390 31 HOH HOH A . C 3 HOH 47 391 32 HOH HOH A . C 3 HOH 48 392 33 HOH HOH A . C 3 HOH 49 393 34 HOH HOH A . C 3 HOH 50 394 35 HOH HOH A . C 3 HOH 51 395 36 HOH HOH A . C 3 HOH 52 396 37 HOH HOH A . C 3 HOH 53 397 38 HOH HOH A . C 3 HOH 54 398 39 HOH HOH A . C 3 HOH 55 399 40 HOH HOH A . C 3 HOH 56 400 41 HOH HOH A . C 3 HOH 57 402 42 HOH HOH A . C 3 HOH 58 403 43 HOH HOH A . C 3 HOH 59 404 44 HOH HOH A . C 3 HOH 60 405 45 HOH HOH A . C 3 HOH 61 406 46 HOH HOH A . C 3 HOH 62 407 47 HOH HOH A . C 3 HOH 63 408 48 HOH HOH A . C 3 HOH 64 409 49 HOH HOH A . C 3 HOH 65 410 50 HOH HOH A . C 3 HOH 66 411 51 HOH HOH A . C 3 HOH 67 412 52 HOH HOH A . C 3 HOH 68 413 53 HOH HOH A . C 3 HOH 69 414 54 HOH HOH A . C 3 HOH 70 415 55 HOH HOH A . C 3 HOH 71 416 56 HOH HOH A . C 3 HOH 72 417 57 HOH HOH A . C 3 HOH 73 418 58 HOH HOH A . C 3 HOH 74 419 59 HOH HOH A . C 3 HOH 75 420 60 HOH HOH A . C 3 HOH 76 421 61 HOH HOH A . C 3 HOH 77 422 62 HOH HOH A . C 3 HOH 78 423 63 HOH HOH A . C 3 HOH 79 424 64 HOH HOH A . C 3 HOH 80 425 65 HOH HOH A . C 3 HOH 81 426 66 HOH HOH A . C 3 HOH 82 427 67 HOH HOH A . C 3 HOH 83 428 68 HOH HOH A . C 3 HOH 84 429 69 HOH HOH A . C 3 HOH 85 430 70 HOH HOH A . C 3 HOH 86 431 71 HOH HOH A . C 3 HOH 87 432 72 HOH HOH A . C 3 HOH 88 433 73 HOH HOH A . C 3 HOH 89 434 74 HOH HOH A . C 3 HOH 90 435 75 HOH HOH A . C 3 HOH 91 436 76 HOH HOH A . C 3 HOH 92 437 77 HOH HOH A . C 3 HOH 93 438 78 HOH HOH A . C 3 HOH 94 439 79 HOH HOH A . C 3 HOH 95 440 80 HOH HOH A . C 3 HOH 96 441 81 HOH HOH A . C 3 HOH 97 442 82 HOH HOH A . C 3 HOH 98 443 83 HOH HOH A . C 3 HOH 99 444 84 HOH HOH A . C 3 HOH 100 445 85 HOH HOH A . C 3 HOH 101 446 86 HOH HOH A . C 3 HOH 102 447 87 HOH HOH A . C 3 HOH 103 448 88 HOH HOH A . C 3 HOH 104 449 89 HOH HOH A . C 3 HOH 105 450 90 HOH HOH A . C 3 HOH 106 451 91 HOH HOH A . C 3 HOH 107 452 92 HOH HOH A . C 3 HOH 108 453 93 HOH HOH A . C 3 HOH 109 454 94 HOH HOH A . C 3 HOH 110 455 95 HOH HOH A . C 3 HOH 111 456 96 HOH HOH A . C 3 HOH 112 457 97 HOH HOH A . C 3 HOH 113 458 98 HOH HOH A . C 3 HOH 114 459 99 HOH HOH A . C 3 HOH 115 460 100 HOH HOH A . C 3 HOH 116 461 101 HOH HOH A . C 3 HOH 117 462 102 HOH HOH A . C 3 HOH 118 463 103 HOH HOH A . C 3 HOH 119 464 104 HOH HOH A . C 3 HOH 120 465 105 HOH HOH A . C 3 HOH 121 466 106 HOH HOH A . C 3 HOH 122 467 107 HOH HOH A . C 3 HOH 123 468 108 HOH HOH A . C 3 HOH 124 469 109 HOH HOH A . C 3 HOH 125 470 110 HOH HOH A . C 3 HOH 126 471 111 HOH HOH A . C 3 HOH 127 472 112 HOH HOH A . C 3 HOH 128 473 113 HOH HOH A . C 3 HOH 129 474 114 HOH HOH A . C 3 HOH 130 475 115 HOH HOH A . C 3 HOH 131 476 116 HOH HOH A . C 3 HOH 132 477 117 HOH HOH A . C 3 HOH 133 478 118 HOH HOH A . C 3 HOH 134 479 119 HOH HOH A . C 3 HOH 135 480 120 HOH HOH A . C 3 HOH 136 481 121 HOH HOH A . C 3 HOH 137 482 122 HOH HOH A . C 3 HOH 138 483 123 HOH HOH A . C 3 HOH 139 484 124 HOH HOH A . C 3 HOH 140 485 125 HOH HOH A . C 3 HOH 141 486 126 HOH HOH A . C 3 HOH 142 487 127 HOH HOH A . C 3 HOH 143 488 128 HOH HOH A . C 3 HOH 144 489 129 HOH HOH A . C 3 HOH 145 490 130 HOH HOH A . C 3 HOH 146 491 131 HOH HOH A . C 3 HOH 147 492 132 HOH HOH A . C 3 HOH 148 493 133 HOH HOH A . C 3 HOH 149 494 134 HOH HOH A . C 3 HOH 150 495 135 HOH HOH A . C 3 HOH 151 496 136 HOH HOH A . C 3 HOH 152 497 137 HOH HOH A . C 3 HOH 153 498 138 HOH HOH A . C 3 HOH 154 499 139 HOH HOH A . C 3 HOH 155 500 140 HOH HOH A . C 3 HOH 156 501 141 HOH HOH A . C 3 HOH 157 502 142 HOH HOH A . C 3 HOH 158 503 143 HOH HOH A . C 3 HOH 159 504 144 HOH HOH A . C 3 HOH 160 505 145 HOH HOH A . C 3 HOH 161 506 146 HOH HOH A . C 3 HOH 162 507 147 HOH HOH A . C 3 HOH 163 508 148 HOH HOH A . C 3 HOH 164 509 149 HOH HOH A . C 3 HOH 165 510 150 HOH HOH A . C 3 HOH 166 511 151 HOH HOH A . C 3 HOH 167 512 152 HOH HOH A . C 3 HOH 168 513 153 HOH HOH A . C 3 HOH 169 514 154 HOH HOH A . C 3 HOH 170 515 155 HOH HOH A . C 3 HOH 171 516 156 HOH HOH A . C 3 HOH 172 517 157 HOH HOH A . C 3 HOH 173 518 158 HOH HOH A . C 3 HOH 174 519 159 HOH HOH A . C 3 HOH 175 520 161 HOH HOH A . C 3 HOH 176 521 162 HOH HOH A . C 3 HOH 177 522 163 HOH HOH A . C 3 HOH 178 523 164 HOH HOH A . C 3 HOH 179 524 165 HOH HOH A . C 3 HOH 180 525 166 HOH HOH A . C 3 HOH 181 526 167 HOH HOH A . C 3 HOH 182 527 168 HOH HOH A . C 3 HOH 183 528 169 HOH HOH A . C 3 HOH 184 529 170 HOH HOH A . C 3 HOH 185 530 171 HOH HOH A . C 3 HOH 186 531 172 HOH HOH A . C 3 HOH 187 532 173 HOH HOH A . C 3 HOH 188 533 174 HOH HOH A . C 3 HOH 189 534 175 HOH HOH A . C 3 HOH 190 535 176 HOH HOH A . C 3 HOH 191 536 177 HOH HOH A . C 3 HOH 192 537 178 HOH HOH A . C 3 HOH 193 538 179 HOH HOH A . C 3 HOH 194 539 180 HOH HOH A . C 3 HOH 195 540 181 HOH HOH A . C 3 HOH 196 541 182 HOH HOH A . C 3 HOH 197 542 183 HOH HOH A . C 3 HOH 198 543 184 HOH HOH A . C 3 HOH 199 544 185 HOH HOH A . C 3 HOH 200 545 186 HOH HOH A . C 3 HOH 201 546 187 HOH HOH A . C 3 HOH 202 547 188 HOH HOH A . C 3 HOH 203 548 190 HOH HOH A . C 3 HOH 204 549 191 HOH HOH A . C 3 HOH 205 550 192 HOH HOH A . C 3 HOH 206 551 193 HOH HOH A . C 3 HOH 207 552 194 HOH HOH A . C 3 HOH 208 553 195 HOH HOH A . C 3 HOH 209 554 196 HOH HOH A . C 3 HOH 210 555 197 HOH HOH A . C 3 HOH 211 556 198 HOH HOH A . C 3 HOH 212 557 199 HOH HOH A . C 3 HOH 213 558 200 HOH HOH A . C 3 HOH 214 559 201 HOH HOH A . C 3 HOH 215 560 202 HOH HOH A . C 3 HOH 216 561 203 HOH HOH A . C 3 HOH 217 562 204 HOH HOH A . C 3 HOH 218 563 205 HOH HOH A . C 3 HOH 219 564 206 HOH HOH A . C 3 HOH 220 565 207 HOH HOH A . C 3 HOH 221 566 208 HOH HOH A . C 3 HOH 222 567 209 HOH HOH A . C 3 HOH 223 568 210 HOH HOH A . C 3 HOH 224 569 211 HOH HOH A . C 3 HOH 225 570 212 HOH HOH A . C 3 HOH 226 571 213 HOH HOH A . C 3 HOH 227 572 214 HOH HOH A . C 3 HOH 228 573 215 HOH HOH A . C 3 HOH 229 574 216 HOH HOH A . C 3 HOH 230 575 217 HOH HOH A . C 3 HOH 231 576 218 HOH HOH A . C 3 HOH 232 577 219 HOH HOH A . C 3 HOH 233 578 220 HOH HOH A . C 3 HOH 234 579 221 HOH HOH A . C 3 HOH 235 580 222 HOH HOH A . C 3 HOH 236 581 223 HOH HOH A . C 3 HOH 237 582 224 HOH HOH A . C 3 HOH 238 583 225 HOH HOH A . C 3 HOH 239 584 226 HOH HOH A . C 3 HOH 240 585 227 HOH HOH A . C 3 HOH 241 586 228 HOH HOH A . C 3 HOH 242 587 229 HOH HOH A . C 3 HOH 243 588 230 HOH HOH A . C 3 HOH 244 589 232 HOH HOH A . C 3 HOH 245 590 233 HOH HOH A . C 3 HOH 246 591 234 HOH HOH A . C 3 HOH 247 592 235 HOH HOH A . C 3 HOH 248 593 236 HOH HOH A . C 3 HOH 249 594 237 HOH HOH A . C 3 HOH 250 595 238 HOH HOH A . C 3 HOH 251 596 239 HOH HOH A . C 3 HOH 252 597 240 HOH HOH A . C 3 HOH 253 598 241 HOH HOH A . C 3 HOH 254 599 242 HOH HOH A . C 3 HOH 255 600 243 HOH HOH A . C 3 HOH 256 601 244 HOH HOH A . C 3 HOH 257 602 245 HOH HOH A . C 3 HOH 258 603 246 HOH HOH A . C 3 HOH 259 604 247 HOH HOH A . C 3 HOH 260 605 248 HOH HOH A . C 3 HOH 261 606 249 HOH HOH A . C 3 HOH 262 607 250 HOH HOH A . C 3 HOH 263 608 251 HOH HOH A . C 3 HOH 264 609 252 HOH HOH A . C 3 HOH 265 610 253 HOH HOH A . C 3 HOH 266 611 254 HOH HOH A . C 3 HOH 267 612 255 HOH HOH A . C 3 HOH 268 613 256 HOH HOH A . C 3 HOH 269 614 257 HOH HOH A . C 3 HOH 270 615 258 HOH HOH A . C 3 HOH 271 616 259 HOH HOH A . C 3 HOH 272 617 260 HOH HOH A . C 3 HOH 273 618 261 HOH HOH A . C 3 HOH 274 619 262 HOH HOH A . C 3 HOH 275 620 263 HOH HOH A . C 3 HOH 276 621 264 HOH HOH A . C 3 HOH 277 622 265 HOH HOH A . C 3 HOH 278 623 266 HOH HOH A . C 3 HOH 279 624 267 HOH HOH A . C 3 HOH 280 625 268 HOH HOH A . C 3 HOH 281 626 269 HOH HOH A . C 3 HOH 282 627 270 HOH HOH A . C 3 HOH 283 628 271 HOH HOH A . C 3 HOH 284 629 272 HOH HOH A . C 3 HOH 285 630 273 HOH HOH A . C 3 HOH 286 631 274 HOH HOH A . C 3 HOH 287 632 275 HOH HOH A . C 3 HOH 288 633 277 HOH HOH A . C 3 HOH 289 634 278 HOH HOH A . C 3 HOH 290 635 279 HOH HOH A . C 3 HOH 291 636 280 HOH HOH A . C 3 HOH 292 637 281 HOH HOH A . C 3 HOH 293 638 282 HOH HOH A . C 3 HOH 294 639 283 HOH HOH A . C 3 HOH 295 640 284 HOH HOH A . C 3 HOH 296 641 285 HOH HOH A . C 3 HOH 297 642 286 HOH HOH A . C 3 HOH 298 643 287 HOH HOH A . C 3 HOH 299 644 288 HOH HOH A . C 3 HOH 300 645 289 HOH HOH A . C 3 HOH 301 646 290 HOH HOH A . C 3 HOH 302 647 291 HOH HOH A . C 3 HOH 303 648 292 HOH HOH A . C 3 HOH 304 649 293 HOH HOH A . C 3 HOH 305 650 294 HOH HOH A . C 3 HOH 306 651 295 HOH HOH A . C 3 HOH 307 652 296 HOH HOH A . C 3 HOH 308 653 297 HOH HOH A . C 3 HOH 309 654 298 HOH HOH A . C 3 HOH 310 655 299 HOH HOH A . C 3 HOH 311 656 300 HOH HOH A . C 3 HOH 312 657 301 HOH HOH A . C 3 HOH 313 658 302 HOH HOH A . C 3 HOH 314 659 303 HOH HOH A . C 3 HOH 315 660 304 HOH HOH A . C 3 HOH 316 661 305 HOH HOH A . C 3 HOH 317 662 306 HOH HOH A . C 3 HOH 318 663 307 HOH HOH A . C 3 HOH 319 664 308 HOH HOH A . C 3 HOH 320 665 309 HOH HOH A . C 3 HOH 321 666 310 HOH HOH A . C 3 HOH 322 667 311 HOH HOH A . C 3 HOH 323 668 312 HOH HOH A . C 3 HOH 324 669 313 HOH HOH A . C 3 HOH 325 670 314 HOH HOH A . C 3 HOH 326 671 315 HOH HOH A . C 3 HOH 327 672 316 HOH HOH A . C 3 HOH 328 673 317 HOH HOH A . C 3 HOH 329 674 318 HOH HOH A . C 3 HOH 330 675 319 HOH HOH A . C 3 HOH 331 676 320 HOH HOH A . C 3 HOH 332 677 321 HOH HOH A . C 3 HOH 333 678 322 HOH HOH A . C 3 HOH 334 679 324 HOH HOH A . C 3 HOH 335 680 325 HOH HOH A . C 3 HOH 336 681 326 HOH HOH A . C 3 HOH 337 682 327 HOH HOH A . C 3 HOH 338 683 328 HOH HOH A . C 3 HOH 339 684 329 HOH HOH A . C 3 HOH 340 685 330 HOH HOH A . C 3 HOH 341 686 332 HOH HOH A . C 3 HOH 342 687 333 HOH HOH A . C 3 HOH 343 688 334 HOH HOH A . C 3 HOH 344 689 335 HOH HOH A . C 3 HOH 345 690 337 HOH HOH A . C 3 HOH 346 691 338 HOH HOH A . C 3 HOH 347 692 339 HOH HOH A . C 3 HOH 348 693 340 HOH HOH A . C 3 HOH 349 694 341 HOH HOH A . C 3 HOH 350 695 342 HOH HOH A . C 3 HOH 351 696 343 HOH HOH A . C 3 HOH 352 697 344 HOH HOH A . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 MOLREP . ? program 'Alexei Vaguine' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 3 PHENIX 1.6.1_357 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 MxDC . ? ? ? ? 'data collection' ? ? ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? # _cell.length_a 52.270 _cell.length_b 119.500 _cell.length_c 128.700 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3NTO _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.entry_id 3NTO _symmetry.Int_Tables_number 23 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3NTO _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.62 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 53.04 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method MICROBATCH _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.2M CaCl2, 0.1M Hepes pH 7.5, 14% PEG 400, microbatch, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2008-03-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'SAGITALLY FOCUSED' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97934 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CLSI BEAMLINE 08ID-1' _diffrn_source.pdbx_wavelength_list 0.97934 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site CLSI _diffrn_source.pdbx_synchrotron_beamline 08ID-1 # _reflns.entry_id 3NTO _reflns.d_resolution_high 1.910 _reflns.number_obs 31224 _reflns.pdbx_Rmerge_I_obs 0.036 _reflns.pdbx_netI_over_sigmaI 33.410 _reflns.percent_possible_obs 98.700 _reflns.B_iso_Wilson_estimate 27.557 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40.0 _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 6.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 1.910 1.960 8354 ? 2002 0.137 9.0 ? ? ? ? ? 86.800 ? 1 1.960 2.020 16054 ? 2247 0.113 15.4 ? ? ? ? ? 100.000 ? 2 2.020 2.070 15609 ? 2185 0.094 18.5 ? ? ? ? ? 100.000 ? 3 2.070 2.140 15182 ? 2124 0.082 20.7 ? ? ? ? ? 100.000 ? 4 2.140 2.210 14765 ? 2064 0.067 23.2 ? ? ? ? ? 100.000 ? 5 2.210 2.290 14272 ? 1999 0.061 26.0 ? ? ? ? ? 100.000 ? 6 2.290 2.370 13728 ? 1923 0.056 28.2 ? ? ? ? ? 99.900 ? 7 2.370 2.470 13306 ? 1862 0.048 31.4 ? ? ? ? ? 99.900 ? 8 2.470 2.580 12676 ? 1779 0.044 33.7 ? ? ? ? ? 99.900 ? 9 2.580 2.700 12249 ? 1719 0.040 37.1 ? ? ? ? ? 99.900 ? 10 2.700 2.850 11547 ? 1631 0.036 40.3 ? ? ? ? ? 99.900 ? 11 2.850 3.020 10936 ? 1548 0.034 44.0 ? ? ? ? ? 99.900 ? 12 3.020 3.230 10266 ? 1454 0.032 47.5 ? ? ? ? ? 99.900 ? 13 3.230 3.490 9617 ? 1375 0.029 51.3 ? ? ? ? ? 100.000 ? 14 3.490 3.820 8720 ? 1257 0.028 54.1 ? ? ? ? ? 99.900 ? 15 3.820 4.280 7811 ? 1133 0.027 56.5 ? ? ? ? ? 99.900 ? 16 4.280 4.940 6926 ? 1025 0.026 57.6 ? ? ? ? ? 100.000 ? 17 4.940 6.050 5941 ? 873 0.024 57.2 ? ? ? ? ? 99.900 ? 18 6.050 8.550 4462 ? 690 0.023 56.4 ? ? ? ? ? 99.400 ? 19 8.550 ? 1696 ? 334 0.027 50.2 ? ? ? ? ? 80.500 ? 20 # _refine.entry_id 3NTO _refine.ls_d_res_high 1.9124 _refine.ls_d_res_low 19.6700 _refine.pdbx_ls_sigma_F 1.990 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.8400 _refine.ls_number_reflns_obs 31217 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1696 _refine.ls_R_factor_R_work 0.1675 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2093 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_number_reflns_R_free 1561 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 25.6228 _refine.solvent_model_param_bsol 41.7220 _refine.solvent_model_param_ksol 0.3750 _refine.pdbx_isotropic_thermal_model RANDOM _refine.aniso_B[1][1] 13.2093 _refine.aniso_B[2][2] -4.5027 _refine.aniso_B[3][3] -8.7066 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.2300 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model apo-IDH _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8678 _refine.B_iso_max 97.740 _refine.B_iso_min 8.240 _refine.occupancy_max 1.000 _refine.occupancy_min 0.380 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error 19.65 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2644 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 352 _refine_hist.number_atoms_total 3011 _refine_hist.d_res_high 1.9124 _refine_hist.d_res_low 19.6700 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 2736 0.007 ? ? 'X-RAY DIFFRACTION' ? f_angle_d 3716 1.023 ? ? 'X-RAY DIFFRACTION' ? f_chiral_restr 422 0.073 ? ? 'X-RAY DIFFRACTION' ? f_plane_restr 481 0.004 ? ? 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 1025 13.610 ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 1.9124 1.9807 10 90.0000 2646 . 0.1931 0.2264 . 140 . 2786 . . 'X-RAY DIFFRACTION' 1.9807 2.0600 10 100.0000 2964 . 0.1742 0.2303 . 156 . 3120 . . 'X-RAY DIFFRACTION' 2.0600 2.1536 10 100.0000 2956 . 0.1708 0.1937 . 155 . 3111 . . 'X-RAY DIFFRACTION' 2.1536 2.2670 10 100.0000 2981 . 0.1681 0.2465 . 157 . 3138 . . 'X-RAY DIFFRACTION' 2.2670 2.4088 10 100.0000 2984 . 0.1734 0.2243 . 157 . 3141 . . 'X-RAY DIFFRACTION' 2.4088 2.5944 10 100.0000 2964 . 0.1692 0.2000 . 156 . 3120 . . 'X-RAY DIFFRACTION' 2.5944 2.8548 10 100.0000 2999 . 0.1704 0.2039 . 158 . 3157 . . 'X-RAY DIFFRACTION' 2.8548 3.2662 10 100.0000 3022 . 0.1745 0.2183 . 159 . 3181 . . 'X-RAY DIFFRACTION' 3.2662 4.1089 10 100.0000 3016 . 0.1517 0.1810 . 159 . 3175 . . 'X-RAY DIFFRACTION' 4.1089 19.6715 10 99.0000 3124 . 0.1583 0.2002 . 164 . 3288 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3NTO _struct.title 'Crystal structure of K97V mutant myo-inositol dehydrogenase from Bacillus subtilis' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3NTO _struct_keywords.text 'K97V mutant, BSIDH, oxidoreductase, N-terminal Rossmann fold domain, glyceraldehyde-3-phosphate like C-terminal domain' _struct_keywords.pdbx_keywords OXIDOREDUCTASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code IOLG_BACSU _struct_ref.pdbx_db_accession P26935 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAHE SSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKEALDNHVIGEPLMIHCAHRNPTV GDNYTTDMAVVDTLVHEIDVLHWLVNDDYESVQVIYPKKSKNALPHLKDPQIVVIETKGGIVINAEIYVNCKYGYDIQCE IVGEDGIIKLPEPSSISLRKEGRFSTDILMDWQRRFVAAYDVEIQDFIDSIQKKGEVSGPTAWDGYIAAVTTDACVKAQE SGQKEKVELKEKPEFYQSFTTVQN ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3NTO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 344 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P26935 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 344 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 344 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3NTO _struct_ref_seq_dif.mon_id VAL _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 97 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P26935 _struct_ref_seq_dif.db_mon_id LYS _struct_ref_seq_dif.pdbx_seq_db_seq_num 97 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 97 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 14310 ? 1 MORE -24 ? 1 'SSA (A^2)' 52350 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1.0000000000 0.0000000000 0.0000000000 -52.2700000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_455 -x-1,y,-z -1.0000000000 0.0000000000 0.0000000000 -52.2700000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_555 x,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 11 ? LYS A 24 ? GLY A 11 LYS A 24 1 ? 14 HELX_P HELX_P2 2 ASN A 37 ? TYR A 48 ? ASN A 37 TYR A 48 1 ? 12 HELX_P HELX_P3 3 ASN A 57 ? ALA A 63 ? ASN A 57 ALA A 63 1 ? 7 HELX_P HELX_P4 4 TRP A 75 ? PRO A 77 ? TRP A 75 PRO A 77 5 ? 3 HELX_P HELX_P5 5 ALA A 78 ? ALA A 89 ? ALA A 78 ALA A 89 1 ? 12 HELX_P HELX_P6 6 THR A 102 ? GLY A 117 ? THR A 102 GLY A 117 1 ? 16 HELX_P HELX_P7 7 PHE A 125 ? TYR A 129 ? PHE A 125 TYR A 129 5 ? 5 HELX_P HELX_P8 8 ASP A 130 ? ASN A 142 ? ASP A 130 ASN A 142 1 ? 13 HELX_P HELX_P9 9 ASP A 167 ? ASP A 172 ? ASP A 167 ASP A 172 1 ? 6 HELX_P HELX_P10 10 LEU A 174 ? ASN A 186 ? LEU A 174 ASN A 186 1 ? 13 HELX_P HELX_P11 11 ASP A 271 ? ARG A 275 ? ASP A 271 ARG A 275 5 ? 5 HELX_P HELX_P12 12 PHE A 276 ? GLY A 295 ? PHE A 276 GLY A 295 1 ? 20 HELX_P HELX_P13 13 THR A 301 ? GLY A 322 ? THR A 301 GLY A 322 1 ? 22 HELX_P HELX_P14 14 PRO A 333 ? GLN A 337 ? PRO A 333 GLN A 337 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 VAL 97 A . ? VAL 97 A PRO 98 A ? PRO 98 A 1 0.28 2 ASP 209 A . ? ASP 209 A PRO 210 A ? PRO 210 A 1 5.56 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 7 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 53 ? VAL A 54 ? THR A 53 VAL A 54 A 2 ALA A 28 ? THR A 34 ? ALA A 28 THR A 34 A 3 LEU A 3 ? ILE A 8 ? LEU A 3 ILE A 8 A 4 ALA A 69 ? VAL A 72 ? ALA A 69 VAL A 72 A 5 TYR A 92 ? CYS A 95 ? TYR A 92 CYS A 95 A 6 VAL A 121 ? VAL A 123 ? VAL A 121 VAL A 123 B 1 ILE A 247 ? LYS A 249 ? ILE A 247 LYS A 249 B 2 ASP A 236 ? GLY A 243 ? ASP A 236 GLY A 243 B 3 PRO A 148 ? ARG A 156 ? PRO A 148 ARG A 156 B 4 VAL A 222 ? TYR A 228 ? VAL A 222 TYR A 228 B 5 GLN A 211 ? THR A 217 ? GLN A 211 THR A 217 B 6 TYR A 189 ? ILE A 195 ? TYR A 189 ILE A 195 B 7 GLU A 325 ? LYS A 326 ? GLU A 325 LYS A 326 C 1 SER A 257 ? LYS A 260 ? SER A 257 LYS A 260 C 2 ARG A 263 ? THR A 266 ? ARG A 263 THR A 266 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 53 ? O THR A 53 N VAL A 33 ? N VAL A 33 A 2 3 O GLU A 29 ? O GLU A 29 N ILE A 5 ? N ILE A 5 A 3 4 N ILE A 8 ? N ILE A 8 O LEU A 71 ? O LEU A 71 A 4 5 N VAL A 72 ? N VAL A 72 O PHE A 94 ? O PHE A 94 A 5 6 N CYS A 95 ? N CYS A 95 O GLN A 122 ? O GLN A 122 B 1 2 O ILE A 248 ? O ILE A 248 N ILE A 241 ? N ILE A 241 B 2 3 O VAL A 242 ? O VAL A 242 N LEU A 149 ? N LEU A 149 B 3 4 N CYS A 153 ? N CYS A 153 O GLU A 226 ? O GLU A 226 B 4 5 O ILE A 223 ? O ILE A 223 N ILE A 215 ? N ILE A 215 B 5 6 O GLU A 216 ? O GLU A 216 N GLU A 190 ? N GLU A 190 B 6 7 N VAL A 192 ? N VAL A 192 O GLU A 325 ? O GLU A 325 C 1 2 N LEU A 258 ? N LEU A 258 O SER A 265 ? O SER A 265 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id EPE _struct_site.pdbx_auth_seq_id 401 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 8 _struct_site.details 'BINDING SITE FOR RESIDUE EPE A 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 VAL A 160 ? VAL A 160 . ? 1_555 ? 2 AC1 8 GLY A 161 ? GLY A 161 . ? 1_555 ? 3 AC1 8 TYR A 164 ? TYR A 164 . ? 1_555 ? 4 AC1 8 ASP A 172 ? ASP A 172 . ? 1_555 ? 5 AC1 8 THR A 173 ? THR A 173 . ? 1_555 ? 6 AC1 8 TYR A 235 ? TYR A 235 . ? 1_555 ? 7 AC1 8 TRP A 272 ? TRP A 272 . ? 1_555 ? 8 AC1 8 HOH C . ? HOH A 683 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 24 ? ? -130.24 -35.95 2 1 THR A 173 ? ? -101.90 -64.35 3 1 LYS A 232 ? ? 69.42 -40.77 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 601 ? C HOH . 2 1 A HOH 604 ? C HOH . 3 1 A HOH 618 ? C HOH . 4 1 A HOH 679 ? C HOH . 5 1 A HOH 686 ? C HOH . # _phasing.method MR # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A PHE 339 ? A PHE 339 2 1 Y 1 A THR 340 ? A THR 340 3 1 Y 1 A THR 341 ? A THR 341 4 1 Y 1 A VAL 342 ? A VAL 342 5 1 Y 1 A GLN 343 ? A GLN 343 6 1 Y 1 A ASN 344 ? A ASN 344 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EPE N1 N N N 88 EPE C2 C N N 89 EPE C3 C N N 90 EPE N4 N N N 91 EPE C5 C N N 92 EPE C6 C N N 93 EPE C7 C N N 94 EPE C8 C N N 95 EPE O8 O N N 96 EPE C9 C N N 97 EPE C10 C N N 98 EPE S S N N 99 EPE O1S O N N 100 EPE O2S O N N 101 EPE O3S O N N 102 EPE H21 H N N 103 EPE H22 H N N 104 EPE H31 H N N 105 EPE H32 H N N 106 EPE H51 H N N 107 EPE H52 H N N 108 EPE H61 H N N 109 EPE H62 H N N 110 EPE H71 H N N 111 EPE H72 H N N 112 EPE H81 H N N 113 EPE H82 H N N 114 EPE HO8 H N N 115 EPE H91 H N N 116 EPE H92 H N N 117 EPE H101 H N N 118 EPE H102 H N N 119 EPE HOS3 H N N 120 GLN N N N N 121 GLN CA C N S 122 GLN C C N N 123 GLN O O N N 124 GLN CB C N N 125 GLN CG C N N 126 GLN CD C N N 127 GLN OE1 O N N 128 GLN NE2 N N N 129 GLN OXT O N N 130 GLN H H N N 131 GLN H2 H N N 132 GLN HA H N N 133 GLN HB2 H N N 134 GLN HB3 H N N 135 GLN HG2 H N N 136 GLN HG3 H N N 137 GLN HE21 H N N 138 GLN HE22 H N N 139 GLN HXT H N N 140 GLU N N N N 141 GLU CA C N S 142 GLU C C N N 143 GLU O O N N 144 GLU CB C N N 145 GLU CG C N N 146 GLU CD C N N 147 GLU OE1 O N N 148 GLU OE2 O N N 149 GLU OXT O N N 150 GLU H H N N 151 GLU H2 H N N 152 GLU HA H N N 153 GLU HB2 H N N 154 GLU HB3 H N N 155 GLU HG2 H N N 156 GLU HG3 H N N 157 GLU HE2 H N N 158 GLU HXT H N N 159 GLY N N N N 160 GLY CA C N N 161 GLY C C N N 162 GLY O O N N 163 GLY OXT O N N 164 GLY H H N N 165 GLY H2 H N N 166 GLY HA2 H N N 167 GLY HA3 H N N 168 GLY HXT H N N 169 HIS N N N N 170 HIS CA C N S 171 HIS C C N N 172 HIS O O N N 173 HIS CB C N N 174 HIS CG C Y N 175 HIS ND1 N Y N 176 HIS CD2 C Y N 177 HIS CE1 C Y N 178 HIS NE2 N Y N 179 HIS OXT O N N 180 HIS H H N N 181 HIS H2 H N N 182 HIS HA H N N 183 HIS HB2 H N N 184 HIS HB3 H N N 185 HIS HD1 H N N 186 HIS HD2 H N N 187 HIS HE1 H N N 188 HIS HE2 H N N 189 HIS HXT H N N 190 HOH O O N N 191 HOH H1 H N N 192 HOH H2 H N N 193 ILE N N N N 194 ILE CA C N S 195 ILE C C N N 196 ILE O O N N 197 ILE CB C N S 198 ILE CG1 C N N 199 ILE CG2 C N N 200 ILE CD1 C N N 201 ILE OXT O N N 202 ILE H H N N 203 ILE H2 H N N 204 ILE HA H N N 205 ILE HB H N N 206 ILE HG12 H N N 207 ILE HG13 H N N 208 ILE HG21 H N N 209 ILE HG22 H N N 210 ILE HG23 H N N 211 ILE HD11 H N N 212 ILE HD12 H N N 213 ILE HD13 H N N 214 ILE HXT H N N 215 LEU N N N N 216 LEU CA C N S 217 LEU C C N N 218 LEU O O N N 219 LEU CB C N N 220 LEU CG C N N 221 LEU CD1 C N N 222 LEU CD2 C N N 223 LEU OXT O N N 224 LEU H H N N 225 LEU H2 H N N 226 LEU HA H N N 227 LEU HB2 H N N 228 LEU HB3 H N N 229 LEU HG H N N 230 LEU HD11 H N N 231 LEU HD12 H N N 232 LEU HD13 H N N 233 LEU HD21 H N N 234 LEU HD22 H N N 235 LEU HD23 H N N 236 LEU HXT H N N 237 LYS N N N N 238 LYS CA C N S 239 LYS C C N N 240 LYS O O N N 241 LYS CB C N N 242 LYS CG C N N 243 LYS CD C N N 244 LYS CE C N N 245 LYS NZ N N N 246 LYS OXT O N N 247 LYS H H N N 248 LYS H2 H N N 249 LYS HA H N N 250 LYS HB2 H N N 251 LYS HB3 H N N 252 LYS HG2 H N N 253 LYS HG3 H N N 254 LYS HD2 H N N 255 LYS HD3 H N N 256 LYS HE2 H N N 257 LYS HE3 H N N 258 LYS HZ1 H N N 259 LYS HZ2 H N N 260 LYS HZ3 H N N 261 LYS HXT H N N 262 MET N N N N 263 MET CA C N S 264 MET C C N N 265 MET O O N N 266 MET CB C N N 267 MET CG C N N 268 MET SD S N N 269 MET CE C N N 270 MET OXT O N N 271 MET H H N N 272 MET H2 H N N 273 MET HA H N N 274 MET HB2 H N N 275 MET HB3 H N N 276 MET HG2 H N N 277 MET HG3 H N N 278 MET HE1 H N N 279 MET HE2 H N N 280 MET HE3 H N N 281 MET HXT H N N 282 PHE N N N N 283 PHE CA C N S 284 PHE C C N N 285 PHE O O N N 286 PHE CB C N N 287 PHE CG C Y N 288 PHE CD1 C Y N 289 PHE CD2 C Y N 290 PHE CE1 C Y N 291 PHE CE2 C Y N 292 PHE CZ C Y N 293 PHE OXT O N N 294 PHE H H N N 295 PHE H2 H N N 296 PHE HA H N N 297 PHE HB2 H N N 298 PHE HB3 H N N 299 PHE HD1 H N N 300 PHE HD2 H N N 301 PHE HE1 H N N 302 PHE HE2 H N N 303 PHE HZ H N N 304 PHE HXT H N N 305 PRO N N N N 306 PRO CA C N S 307 PRO C C N N 308 PRO O O N N 309 PRO CB C N N 310 PRO CG C N N 311 PRO CD C N N 312 PRO OXT O N N 313 PRO H H N N 314 PRO HA H N N 315 PRO HB2 H N N 316 PRO HB3 H N N 317 PRO HG2 H N N 318 PRO HG3 H N N 319 PRO HD2 H N N 320 PRO HD3 H N N 321 PRO HXT H N N 322 SER N N N N 323 SER CA C N S 324 SER C C N N 325 SER O O N N 326 SER CB C N N 327 SER OG O N N 328 SER OXT O N N 329 SER H H N N 330 SER H2 H N N 331 SER HA H N N 332 SER HB2 H N N 333 SER HB3 H N N 334 SER HG H N N 335 SER HXT H N N 336 THR N N N N 337 THR CA C N S 338 THR C C N N 339 THR O O N N 340 THR CB C N R 341 THR OG1 O N N 342 THR CG2 C N N 343 THR OXT O N N 344 THR H H N N 345 THR H2 H N N 346 THR HA H N N 347 THR HB H N N 348 THR HG1 H N N 349 THR HG21 H N N 350 THR HG22 H N N 351 THR HG23 H N N 352 THR HXT H N N 353 TRP N N N N 354 TRP CA C N S 355 TRP C C N N 356 TRP O O N N 357 TRP CB C N N 358 TRP CG C Y N 359 TRP CD1 C Y N 360 TRP CD2 C Y N 361 TRP NE1 N Y N 362 TRP CE2 C Y N 363 TRP CE3 C Y N 364 TRP CZ2 C Y N 365 TRP CZ3 C Y N 366 TRP CH2 C Y N 367 TRP OXT O N N 368 TRP H H N N 369 TRP H2 H N N 370 TRP HA H N N 371 TRP HB2 H N N 372 TRP HB3 H N N 373 TRP HD1 H N N 374 TRP HE1 H N N 375 TRP HE3 H N N 376 TRP HZ2 H N N 377 TRP HZ3 H N N 378 TRP HH2 H N N 379 TRP HXT H N N 380 TYR N N N N 381 TYR CA C N S 382 TYR C C N N 383 TYR O O N N 384 TYR CB C N N 385 TYR CG C Y N 386 TYR CD1 C Y N 387 TYR CD2 C Y N 388 TYR CE1 C Y N 389 TYR CE2 C Y N 390 TYR CZ C Y N 391 TYR OH O N N 392 TYR OXT O N N 393 TYR H H N N 394 TYR H2 H N N 395 TYR HA H N N 396 TYR HB2 H N N 397 TYR HB3 H N N 398 TYR HD1 H N N 399 TYR HD2 H N N 400 TYR HE1 H N N 401 TYR HE2 H N N 402 TYR HH H N N 403 TYR HXT H N N 404 VAL N N N N 405 VAL CA C N S 406 VAL C C N N 407 VAL O O N N 408 VAL CB C N N 409 VAL CG1 C N N 410 VAL CG2 C N N 411 VAL OXT O N N 412 VAL H H N N 413 VAL H2 H N N 414 VAL HA H N N 415 VAL HB H N N 416 VAL HG11 H N N 417 VAL HG12 H N N 418 VAL HG13 H N N 419 VAL HG21 H N N 420 VAL HG22 H N N 421 VAL HG23 H N N 422 VAL HXT H N N 423 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EPE N1 C2 sing N N 83 EPE N1 C6 sing N N 84 EPE N1 C9 sing N N 85 EPE C2 C3 sing N N 86 EPE C2 H21 sing N N 87 EPE C2 H22 sing N N 88 EPE C3 N4 sing N N 89 EPE C3 H31 sing N N 90 EPE C3 H32 sing N N 91 EPE N4 C5 sing N N 92 EPE N4 C7 sing N N 93 EPE C5 C6 sing N N 94 EPE C5 H51 sing N N 95 EPE C5 H52 sing N N 96 EPE C6 H61 sing N N 97 EPE C6 H62 sing N N 98 EPE C7 C8 sing N N 99 EPE C7 H71 sing N N 100 EPE C7 H72 sing N N 101 EPE C8 O8 sing N N 102 EPE C8 H81 sing N N 103 EPE C8 H82 sing N N 104 EPE O8 HO8 sing N N 105 EPE C9 C10 sing N N 106 EPE C9 H91 sing N N 107 EPE C9 H92 sing N N 108 EPE C10 S sing N N 109 EPE C10 H101 sing N N 110 EPE C10 H102 sing N N 111 EPE S O1S doub N N 112 EPE S O2S doub N N 113 EPE S O3S sing N N 114 EPE O3S HOS3 sing N N 115 GLN N CA sing N N 116 GLN N H sing N N 117 GLN N H2 sing N N 118 GLN CA C sing N N 119 GLN CA CB sing N N 120 GLN CA HA sing N N 121 GLN C O doub N N 122 GLN C OXT sing N N 123 GLN CB CG sing N N 124 GLN CB HB2 sing N N 125 GLN CB HB3 sing N N 126 GLN CG CD sing N N 127 GLN CG HG2 sing N N 128 GLN CG HG3 sing N N 129 GLN CD OE1 doub N N 130 GLN CD NE2 sing N N 131 GLN NE2 HE21 sing N N 132 GLN NE2 HE22 sing N N 133 GLN OXT HXT sing N N 134 GLU N CA sing N N 135 GLU N H sing N N 136 GLU N H2 sing N N 137 GLU CA C sing N N 138 GLU CA CB sing N N 139 GLU CA HA sing N N 140 GLU C O doub N N 141 GLU C OXT sing N N 142 GLU CB CG sing N N 143 GLU CB HB2 sing N N 144 GLU CB HB3 sing N N 145 GLU CG CD sing N N 146 GLU CG HG2 sing N N 147 GLU CG HG3 sing N N 148 GLU CD OE1 doub N N 149 GLU CD OE2 sing N N 150 GLU OE2 HE2 sing N N 151 GLU OXT HXT sing N N 152 GLY N CA sing N N 153 GLY N H sing N N 154 GLY N H2 sing N N 155 GLY CA C sing N N 156 GLY CA HA2 sing N N 157 GLY CA HA3 sing N N 158 GLY C O doub N N 159 GLY C OXT sing N N 160 GLY OXT HXT sing N N 161 HIS N CA sing N N 162 HIS N H sing N N 163 HIS N H2 sing N N 164 HIS CA C sing N N 165 HIS CA CB sing N N 166 HIS CA HA sing N N 167 HIS C O doub N N 168 HIS C OXT sing N N 169 HIS CB CG sing N N 170 HIS CB HB2 sing N N 171 HIS CB HB3 sing N N 172 HIS CG ND1 sing Y N 173 HIS CG CD2 doub Y N 174 HIS ND1 CE1 doub Y N 175 HIS ND1 HD1 sing N N 176 HIS CD2 NE2 sing Y N 177 HIS CD2 HD2 sing N N 178 HIS CE1 NE2 sing Y N 179 HIS CE1 HE1 sing N N 180 HIS NE2 HE2 sing N N 181 HIS OXT HXT sing N N 182 HOH O H1 sing N N 183 HOH O H2 sing N N 184 ILE N CA sing N N 185 ILE N H sing N N 186 ILE N H2 sing N N 187 ILE CA C sing N N 188 ILE CA CB sing N N 189 ILE CA HA sing N N 190 ILE C O doub N N 191 ILE C OXT sing N N 192 ILE CB CG1 sing N N 193 ILE CB CG2 sing N N 194 ILE CB HB sing N N 195 ILE CG1 CD1 sing N N 196 ILE CG1 HG12 sing N N 197 ILE CG1 HG13 sing N N 198 ILE CG2 HG21 sing N N 199 ILE CG2 HG22 sing N N 200 ILE CG2 HG23 sing N N 201 ILE CD1 HD11 sing N N 202 ILE CD1 HD12 sing N N 203 ILE CD1 HD13 sing N N 204 ILE OXT HXT sing N N 205 LEU N CA sing N N 206 LEU N H sing N N 207 LEU N H2 sing N N 208 LEU CA C sing N N 209 LEU CA CB sing N N 210 LEU CA HA sing N N 211 LEU C O doub N N 212 LEU C OXT sing N N 213 LEU CB CG sing N N 214 LEU CB HB2 sing N N 215 LEU CB HB3 sing N N 216 LEU CG CD1 sing N N 217 LEU CG CD2 sing N N 218 LEU CG HG sing N N 219 LEU CD1 HD11 sing N N 220 LEU CD1 HD12 sing N N 221 LEU CD1 HD13 sing N N 222 LEU CD2 HD21 sing N N 223 LEU CD2 HD22 sing N N 224 LEU CD2 HD23 sing N N 225 LEU OXT HXT sing N N 226 LYS N CA sing N N 227 LYS N H sing N N 228 LYS N H2 sing N N 229 LYS CA C sing N N 230 LYS CA CB sing N N 231 LYS CA HA sing N N 232 LYS C O doub N N 233 LYS C OXT sing N N 234 LYS CB CG sing N N 235 LYS CB HB2 sing N N 236 LYS CB HB3 sing N N 237 LYS CG CD sing N N 238 LYS CG HG2 sing N N 239 LYS CG HG3 sing N N 240 LYS CD CE sing N N 241 LYS CD HD2 sing N N 242 LYS CD HD3 sing N N 243 LYS CE NZ sing N N 244 LYS CE HE2 sing N N 245 LYS CE HE3 sing N N 246 LYS NZ HZ1 sing N N 247 LYS NZ HZ2 sing N N 248 LYS NZ HZ3 sing N N 249 LYS OXT HXT sing N N 250 MET N CA sing N N 251 MET N H sing N N 252 MET N H2 sing N N 253 MET CA C sing N N 254 MET CA CB sing N N 255 MET CA HA sing N N 256 MET C O doub N N 257 MET C OXT sing N N 258 MET CB CG sing N N 259 MET CB HB2 sing N N 260 MET CB HB3 sing N N 261 MET CG SD sing N N 262 MET CG HG2 sing N N 263 MET CG HG3 sing N N 264 MET SD CE sing N N 265 MET CE HE1 sing N N 266 MET CE HE2 sing N N 267 MET CE HE3 sing N N 268 MET OXT HXT sing N N 269 PHE N CA sing N N 270 PHE N H sing N N 271 PHE N H2 sing N N 272 PHE CA C sing N N 273 PHE CA CB sing N N 274 PHE CA HA sing N N 275 PHE C O doub N N 276 PHE C OXT sing N N 277 PHE CB CG sing N N 278 PHE CB HB2 sing N N 279 PHE CB HB3 sing N N 280 PHE CG CD1 doub Y N 281 PHE CG CD2 sing Y N 282 PHE CD1 CE1 sing Y N 283 PHE CD1 HD1 sing N N 284 PHE CD2 CE2 doub Y N 285 PHE CD2 HD2 sing N N 286 PHE CE1 CZ doub Y N 287 PHE CE1 HE1 sing N N 288 PHE CE2 CZ sing Y N 289 PHE CE2 HE2 sing N N 290 PHE CZ HZ sing N N 291 PHE OXT HXT sing N N 292 PRO N CA sing N N 293 PRO N CD sing N N 294 PRO N H sing N N 295 PRO CA C sing N N 296 PRO CA CB sing N N 297 PRO CA HA sing N N 298 PRO C O doub N N 299 PRO C OXT sing N N 300 PRO CB CG sing N N 301 PRO CB HB2 sing N N 302 PRO CB HB3 sing N N 303 PRO CG CD sing N N 304 PRO CG HG2 sing N N 305 PRO CG HG3 sing N N 306 PRO CD HD2 sing N N 307 PRO CD HD3 sing N N 308 PRO OXT HXT sing N N 309 SER N CA sing N N 310 SER N H sing N N 311 SER N H2 sing N N 312 SER CA C sing N N 313 SER CA CB sing N N 314 SER CA HA sing N N 315 SER C O doub N N 316 SER C OXT sing N N 317 SER CB OG sing N N 318 SER CB HB2 sing N N 319 SER CB HB3 sing N N 320 SER OG HG sing N N 321 SER OXT HXT sing N N 322 THR N CA sing N N 323 THR N H sing N N 324 THR N H2 sing N N 325 THR CA C sing N N 326 THR CA CB sing N N 327 THR CA HA sing N N 328 THR C O doub N N 329 THR C OXT sing N N 330 THR CB OG1 sing N N 331 THR CB CG2 sing N N 332 THR CB HB sing N N 333 THR OG1 HG1 sing N N 334 THR CG2 HG21 sing N N 335 THR CG2 HG22 sing N N 336 THR CG2 HG23 sing N N 337 THR OXT HXT sing N N 338 TRP N CA sing N N 339 TRP N H sing N N 340 TRP N H2 sing N N 341 TRP CA C sing N N 342 TRP CA CB sing N N 343 TRP CA HA sing N N 344 TRP C O doub N N 345 TRP C OXT sing N N 346 TRP CB CG sing N N 347 TRP CB HB2 sing N N 348 TRP CB HB3 sing N N 349 TRP CG CD1 doub Y N 350 TRP CG CD2 sing Y N 351 TRP CD1 NE1 sing Y N 352 TRP CD1 HD1 sing N N 353 TRP CD2 CE2 doub Y N 354 TRP CD2 CE3 sing Y N 355 TRP NE1 CE2 sing Y N 356 TRP NE1 HE1 sing N N 357 TRP CE2 CZ2 sing Y N 358 TRP CE3 CZ3 doub Y N 359 TRP CE3 HE3 sing N N 360 TRP CZ2 CH2 doub Y N 361 TRP CZ2 HZ2 sing N N 362 TRP CZ3 CH2 sing Y N 363 TRP CZ3 HZ3 sing N N 364 TRP CH2 HH2 sing N N 365 TRP OXT HXT sing N N 366 TYR N CA sing N N 367 TYR N H sing N N 368 TYR N H2 sing N N 369 TYR CA C sing N N 370 TYR CA CB sing N N 371 TYR CA HA sing N N 372 TYR C O doub N N 373 TYR C OXT sing N N 374 TYR CB CG sing N N 375 TYR CB HB2 sing N N 376 TYR CB HB3 sing N N 377 TYR CG CD1 doub Y N 378 TYR CG CD2 sing Y N 379 TYR CD1 CE1 sing Y N 380 TYR CD1 HD1 sing N N 381 TYR CD2 CE2 doub Y N 382 TYR CD2 HD2 sing N N 383 TYR CE1 CZ doub Y N 384 TYR CE1 HE1 sing N N 385 TYR CE2 CZ sing Y N 386 TYR CE2 HE2 sing N N 387 TYR CZ OH sing N N 388 TYR OH HH sing N N 389 TYR OXT HXT sing N N 390 VAL N CA sing N N 391 VAL N H sing N N 392 VAL N H2 sing N N 393 VAL CA C sing N N 394 VAL CA CB sing N N 395 VAL CA HA sing N N 396 VAL C O doub N N 397 VAL C OXT sing N N 398 VAL CB CG1 sing N N 399 VAL CB CG2 sing N N 400 VAL CB HB sing N N 401 VAL CG1 HG11 sing N N 402 VAL CG1 HG12 sing N N 403 VAL CG1 HG13 sing N N 404 VAL CG2 HG21 sing N N 405 VAL CG2 HG22 sing N N 406 VAL CG2 HG23 sing N N 407 VAL OXT HXT sing N N 408 # _pdbx_initial_refinement_model.accession_code 3MZ0 _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.details apo-IDH # _atom_sites.entry_id 3NTO _atom_sites.fract_transf_matrix[1][1] 0.019131 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008368 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007770 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_