data_3NUL # _entry.id 3NUL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3NUL WWPDB D_1000179071 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3NUL _pdbx_database_status.recvd_initial_deposition_date 1996-11-27 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Thorn, K.' 1 'Christensen, H.E.M.' 2 'Shigeta, R.' 3 'Huddler, D.' 4 'Chua, N.-H.' 5 'Shalaby, L.' 6 'Lindberg, U.' 7 'Schutt, C.E.' 8 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The crystal structure of a major allergen from plants.' Structure 5 19 32 1997 STRUE6 UK 0969-2126 2005 ? 9016723 '10.1016/S0969-2126(97)00163-9' 1 ;Arabidopsis Profilins are Functionally Similar to Yeast Profilins: Identification of a Vascular Bundle-Specific Profilin and a Pollen-Specific Profilin ; 'Plant J.' 10 269 ? 1996 PLJUED UK 0960-7412 2117 ? ? ? 2 'Crystallization and Structure Determination of Bovine Profilin at 2.0 A Resolution' J.Mol.Biol. 240 459 ? 1994 JMOBAK UK 0022-2836 0070 ? ? ? 3 'The Structure of Crystalline Profilin-Beta-Actin' Nature 365 810 ? 1993 NATUAS UK 0028-0836 0006 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Thorn, K.S.' 1 primary 'Christensen, H.E.' 2 primary 'Shigeta, R.' 3 primary 'Huddler, D.' 4 primary 'Shalaby, L.' 5 primary 'Lindberg, U.' 6 primary 'Chua, N.H.' 7 primary 'Schutt, C.E.' 8 1 'Christensen, H.E.' 9 1 'Ramachandran, S.' 10 1 'Tan, C.T.' 11 1 'Surana, U.' 12 1 'Dong, C.H.' 13 1 'Chua, N.H.' 14 2 'Cedergren-Zeppezauer, E.S.' 15 2 'Goonesekere, N.C.' 16 2 'Rozycki, M.D.' 17 2 'Myslik, J.C.' 18 2 'Dauter, Z.' 19 2 'Lindberg, U.' 20 2 'Schutt, C.E.' 21 3 'Schutt, C.E.' 22 3 'Myslik, J.C.' 23 3 'Rozycki, M.D.' 24 3 'Goonesekere, N.C.' 25 3 'Lindberg, U.' 26 # _cell.entry_id 3NUL _cell.length_a 42.040 _cell.length_b 43.070 _cell.length_c 59.450 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3NUL _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PROFILIN I' 14288.672 1 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 4 water nat water 18.015 99 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SWQSYVDDHL(MSE)CDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFLAPTGLFLGGEKY(MSE) VIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEP(MSE)TGGQCNLVVERLGDYLIESEL ; _entity_poly.pdbx_seq_one_letter_code_can ;SWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFLAPTGLFLGGEKYMVIQGEQGA VIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVERLGDYLIESEL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 TRP n 1 3 GLN n 1 4 SER n 1 5 TYR n 1 6 VAL n 1 7 ASP n 1 8 ASP n 1 9 HIS n 1 10 LEU n 1 11 MSE n 1 12 CYS n 1 13 ASP n 1 14 VAL n 1 15 GLU n 1 16 GLY n 1 17 ASN n 1 18 HIS n 1 19 LEU n 1 20 THR n 1 21 ALA n 1 22 ALA n 1 23 ALA n 1 24 ILE n 1 25 LEU n 1 26 GLY n 1 27 GLN n 1 28 ASP n 1 29 GLY n 1 30 SER n 1 31 VAL n 1 32 TRP n 1 33 ALA n 1 34 GLN n 1 35 SER n 1 36 ALA n 1 37 LYS n 1 38 PHE n 1 39 PRO n 1 40 GLN n 1 41 LEU n 1 42 LYS n 1 43 PRO n 1 44 GLN n 1 45 GLU n 1 46 ILE n 1 47 ASP n 1 48 GLY n 1 49 ILE n 1 50 LYS n 1 51 LYS n 1 52 ASP n 1 53 PHE n 1 54 GLU n 1 55 GLU n 1 56 PRO n 1 57 GLY n 1 58 PHE n 1 59 LEU n 1 60 ALA n 1 61 PRO n 1 62 THR n 1 63 GLY n 1 64 LEU n 1 65 PHE n 1 66 LEU n 1 67 GLY n 1 68 GLY n 1 69 GLU n 1 70 LYS n 1 71 TYR n 1 72 MSE n 1 73 VAL n 1 74 ILE n 1 75 GLN n 1 76 GLY n 1 77 GLU n 1 78 GLN n 1 79 GLY n 1 80 ALA n 1 81 VAL n 1 82 ILE n 1 83 ARG n 1 84 GLY n 1 85 LYS n 1 86 LYS n 1 87 GLY n 1 88 PRO n 1 89 GLY n 1 90 GLY n 1 91 VAL n 1 92 THR n 1 93 ILE n 1 94 LYS n 1 95 LYS n 1 96 THR n 1 97 ASN n 1 98 GLN n 1 99 ALA n 1 100 LEU n 1 101 VAL n 1 102 PHE n 1 103 GLY n 1 104 PHE n 1 105 TYR n 1 106 ASP n 1 107 GLU n 1 108 PRO n 1 109 MSE n 1 110 THR n 1 111 GLY n 1 112 GLY n 1 113 GLN n 1 114 CYS n 1 115 ASN n 1 116 LEU n 1 117 VAL n 1 118 VAL n 1 119 GLU n 1 120 ARG n 1 121 LEU n 1 122 GLY n 1 123 ASP n 1 124 TYR n 1 125 LEU n 1 126 ILE n 1 127 GLU n 1 128 SER n 1 129 GLU n 1 130 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'MOUSE EAR CRESS' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Arabidopsis thaliana' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id ? _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location 'CELLULAR CYTOSKELETON' _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PROF1_ARATH _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession Q42449 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFLAPTGLFLGGEKYMVIQGEQG AVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVERLGDYLIESEL ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3NUL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 130 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q42449 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 131 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 131 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3NUL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.90 _exptl_crystal.density_percent_sol 34.69 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_details '2.0 M AMMONIUM SULFATE, 0.1 M CITRATE, PH 5.0, 10 mM DTT, 0.2 mM EDTA' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE AREA DETECTOR' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1996-03-15 _diffrn_detector.details 'NI/RH MIRRORS' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'CRYSTALLINE MONOCHROMATOR' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.95 1.0 2 1.1 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X12C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X12C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.95, 1.1' # _reflns.entry_id 3NUL _reflns.observed_criterion_sigma_I 5. _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 1.6 _reflns.number_obs 32355 _reflns.number_all ? _reflns.percent_possible_obs 96.0 _reflns.pdbx_Rmerge_I_obs 0.0740000 _reflns.pdbx_Rsym_value 0.0550000 _reflns.pdbx_netI_over_sigmaI 18.2 _reflns.B_iso_Wilson_estimate 12.2 _reflns.pdbx_redundancy 4.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.66 _reflns_shell.percent_possible_all 78.8 _reflns_shell.Rmerge_I_obs 0.2230000 _reflns_shell.pdbx_Rsym_value 0.1890000 _reflns_shell.meanI_over_sigI_obs 5.3 _reflns_shell.pdbx_redundancy 2.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3NUL _refine.ls_number_reflns_obs 26492 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 4200000000.0 _refine.pdbx_data_cutoff_low_absF 0.00 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.0 _refine.ls_d_res_high 1.6 _refine.ls_percent_reflns_obs 96. _refine.ls_R_factor_obs 0.1808 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1808 _refine.ls_R_factor_R_free 0.2040 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 6.0 _refine.ls_number_reflns_R_free 880 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 11.1 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method 'DURING REFINEMENT' _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_phase_error ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3NUL _refine_analyze.Luzzati_coordinate_error_obs 0.18 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs 6.0 _refine_analyze.Luzzati_coordinate_error_free 0.18 _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 995 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 17 _refine_hist.number_atoms_solvent 99 _refine_hist.number_atoms_total 1111 _refine_hist.d_res_high 1.6 _refine_hist.d_res_low 8.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.878 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 24.11 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.625 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 1.60 _refine_ls_shell.d_res_low 1.67 _refine_ls_shell.number_reflns_R_work 1635 _refine_ls_shell.R_factor_R_work 0.2562000 _refine_ls_shell.percent_reflns_obs 90.5 _refine_ls_shell.R_factor_R_free 0.2596000 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 6.25 _refine_ls_shell.number_reflns_R_free 109 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARHCSDX.PRO GOLPAR.PRO 'X-RAY DIFFRACTION' 2 SOLVPAR.PRO SEMETPAR.PRO 'X-RAY DIFFRACTION' # _struct.entry_id 3NUL _struct.title 'Profilin I from Arabidopsis thaliana' _struct.pdbx_descriptor 'PROFILIN I' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3NUL _struct_keywords.pdbx_keywords 'ACTIN BINDING PROTEIN' _struct_keywords.text 'PROFILIN, CYTOSKELETON, ACTIN BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 H2 PRO A 43 ? GLU A 54 ? PRO A 44 GLU A 55 1 ? 12 HELX_P HELX_P2 H4 GLY A 111 ? GLU A 127 ? GLY A 112 GLU A 128 1 'SEE REMARK 650' 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MSE 11 N ? ? ? 1_555 A LEU 10 C ? ? A MSE 12 A LEU 11 1_555 ? ? ? ? ? ? ? 1.328 ? covale2 covale ? ? A MSE 11 C ? ? ? 1_555 A CYS 12 N ? ? A MSE 12 A CYS 13 1_555 ? ? ? ? ? ? ? 1.327 ? covale3 covale ? ? A MSE 72 N ? ? ? 1_555 A TYR 71 C ? ? A MSE 73 A TYR 72 1_555 ? ? ? ? ? ? ? 1.329 ? covale4 covale ? ? A MSE 72 C ? ? ? 1_555 A VAL 73 N ? ? A MSE 73 A VAL 74 1_555 ? ? ? ? ? ? ? 1.328 ? covale5 covale ? ? A MSE 109 N ? ? ? 1_555 A PRO 108 C ? ? A MSE 110 A PRO 109 1_555 ? ? ? ? ? ? ? 1.330 ? covale6 covale ? ? A MSE 109 C ? ? ? 1_555 A THR 110 N ? ? A MSE 110 A THR 111 1_555 ? ? ? ? ? ? ? 1.329 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 107 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 108 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 108 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 109 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.04 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 81 ? LYS A 85 ? VAL A 82 LYS A 86 A 2 GLY A 89 ? LYS A 95 ? GLY A 90 LYS A 96 A 3 ALA A 99 ? ASP A 106 ? ALA A 100 ASP A 107 A 4 ALA A 21 ? GLY A 26 ? ALA A 22 GLY A 27 A 5 VAL A 31 ? GLN A 34 ? VAL A 32 GLN A 35 B 1 LEU A 64 ? LEU A 66 ? LEU A 65 LEU A 67 B 2 GLU A 69 ? TYR A 71 ? GLU A 70 TYR A 72 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 82 ? O ILE A 83 N ILE A 93 ? N ILE A 94 A 2 3 O GLY A 90 ? O GLY A 91 N TYR A 105 ? N TYR A 106 A 3 4 O LEU A 100 ? O LEU A 101 N LEU A 25 ? N LEU A 26 A 4 5 O ILE A 24 ? O ILE A 25 N ALA A 33 ? N ALA A 34 B 1 2 O LEU A 64 ? O LEU A 65 N TYR A 71 ? N TYR A 72 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE SO4 A 400' AC2 Software ? ? ? ? 10 'BINDING SITE FOR RESIDUE GOL A 600' AC3 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE GOL A 601' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 SER A 1 ? SER A 2 . ? 1_555 ? 2 AC1 6 LYS A 70 ? LYS A 71 . ? 2_564 ? 3 AC1 6 MSE A 72 ? MSE A 73 . ? 2_564 ? 4 AC1 6 LYS A 95 ? LYS A 96 . ? 4_455 ? 5 AC1 6 HOH E . ? HOH A 217 . ? 2_564 ? 6 AC1 6 HOH E . ? HOH A 241 . ? 1_555 ? 7 AC2 10 ASP A 52 ? ASP A 53 . ? 1_555 ? 8 AC2 10 PHE A 53 ? PHE A 54 . ? 1_555 ? 9 AC2 10 PRO A 56 ? PRO A 57 . ? 1_555 ? 10 AC2 10 GLY A 57 ? GLY A 58 . ? 1_555 ? 11 AC2 10 GLY A 76 ? GLY A 77 . ? 1_555 ? 12 AC2 10 GLY A 79 ? GLY A 80 . ? 1_555 ? 13 AC2 10 VAL A 81 ? VAL A 82 . ? 1_555 ? 14 AC2 10 HOH E . ? HOH A 202 . ? 1_555 ? 15 AC2 10 HOH E . ? HOH A 253 . ? 1_555 ? 16 AC2 10 HOH E . ? HOH A 262 . ? 1_555 ? 17 AC3 5 PHE A 58 ? PHE A 59 . ? 3_645 ? 18 AC3 5 THR A 62 ? THR A 63 . ? 3_645 ? 19 AC3 5 GLU A 77 ? GLU A 78 . ? 1_555 ? 20 AC3 5 LYS A 94 ? LYS A 95 . ? 1_555 ? 21 AC3 5 HOH E . ? HOH A 273 . ? 1_555 ? # _database_PDB_matrix.entry_id 3NUL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3NUL _atom_sites.fract_transf_matrix[1][1] 0.023787 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023218 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016821 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 2 2 SER SER A . n A 1 2 TRP 2 3 3 TRP TRP A . n A 1 3 GLN 3 4 4 GLN GLN A . n A 1 4 SER 4 5 5 SER SER A . n A 1 5 TYR 5 6 6 TYR TYR A . n A 1 6 VAL 6 7 7 VAL VAL A . n A 1 7 ASP 7 8 8 ASP ASP A . n A 1 8 ASP 8 9 9 ASP ASP A . n A 1 9 HIS 9 10 10 HIS HIS A . n A 1 10 LEU 10 11 11 LEU LEU A . n A 1 11 MSE 11 12 12 MSE MSE A . n A 1 12 CYS 12 13 13 CYS CYS A . n A 1 13 ASP 13 14 14 ASP ASP A . n A 1 14 VAL 14 15 15 VAL VAL A . n A 1 15 GLU 15 16 16 GLU GLU A . n A 1 16 GLY 16 17 17 GLY GLY A . n A 1 17 ASN 17 18 18 ASN ASN A . n A 1 18 HIS 18 19 19 HIS HIS A . n A 1 19 LEU 19 20 20 LEU LEU A . n A 1 20 THR 20 21 21 THR THR A . n A 1 21 ALA 21 22 22 ALA ALA A . n A 1 22 ALA 22 23 23 ALA ALA A . n A 1 23 ALA 23 24 24 ALA ALA A . n A 1 24 ILE 24 25 25 ILE ILE A . n A 1 25 LEU 25 26 26 LEU LEU A . n A 1 26 GLY 26 27 27 GLY GLY A . n A 1 27 GLN 27 28 28 GLN GLN A . n A 1 28 ASP 28 29 29 ASP ASP A . n A 1 29 GLY 29 30 30 GLY GLY A . n A 1 30 SER 30 31 31 SER SER A . n A 1 31 VAL 31 32 32 VAL VAL A . n A 1 32 TRP 32 33 33 TRP TRP A . n A 1 33 ALA 33 34 34 ALA ALA A . n A 1 34 GLN 34 35 35 GLN GLN A . n A 1 35 SER 35 36 36 SER SER A . n A 1 36 ALA 36 37 37 ALA ALA A . n A 1 37 LYS 37 38 38 LYS LYS A . n A 1 38 PHE 38 39 39 PHE PHE A . n A 1 39 PRO 39 40 40 PRO PRO A . n A 1 40 GLN 40 41 41 GLN GLN A . n A 1 41 LEU 41 42 42 LEU LEU A . n A 1 42 LYS 42 43 43 LYS LYS A . n A 1 43 PRO 43 44 44 PRO PRO A . n A 1 44 GLN 44 45 45 GLN GLN A . n A 1 45 GLU 45 46 46 GLU GLU A . n A 1 46 ILE 46 47 47 ILE ILE A . n A 1 47 ASP 47 48 48 ASP ASP A . n A 1 48 GLY 48 49 49 GLY GLY A . n A 1 49 ILE 49 50 50 ILE ILE A . n A 1 50 LYS 50 51 51 LYS LYS A . n A 1 51 LYS 51 52 52 LYS LYS A . n A 1 52 ASP 52 53 53 ASP ASP A . n A 1 53 PHE 53 54 54 PHE PHE A . n A 1 54 GLU 54 55 55 GLU GLU A . n A 1 55 GLU 55 56 56 GLU GLU A . n A 1 56 PRO 56 57 57 PRO PRO A . n A 1 57 GLY 57 58 58 GLY GLY A . n A 1 58 PHE 58 59 59 PHE PHE A . n A 1 59 LEU 59 60 60 LEU LEU A . n A 1 60 ALA 60 61 61 ALA ALA A . n A 1 61 PRO 61 62 62 PRO PRO A . n A 1 62 THR 62 63 63 THR THR A . n A 1 63 GLY 63 64 64 GLY GLY A . n A 1 64 LEU 64 65 65 LEU LEU A . n A 1 65 PHE 65 66 66 PHE PHE A . n A 1 66 LEU 66 67 67 LEU LEU A . n A 1 67 GLY 67 68 68 GLY GLY A . n A 1 68 GLY 68 69 69 GLY GLY A . n A 1 69 GLU 69 70 70 GLU GLU A . n A 1 70 LYS 70 71 71 LYS LYS A . n A 1 71 TYR 71 72 72 TYR TYR A . n A 1 72 MSE 72 73 73 MSE MSE A . n A 1 73 VAL 73 74 74 VAL VAL A . n A 1 74 ILE 74 75 75 ILE ILE A . n A 1 75 GLN 75 76 76 GLN GLN A . n A 1 76 GLY 76 77 77 GLY GLY A . n A 1 77 GLU 77 78 78 GLU GLU A . n A 1 78 GLN 78 79 79 GLN GLN A . n A 1 79 GLY 79 80 80 GLY GLY A . n A 1 80 ALA 80 81 81 ALA ALA A . n A 1 81 VAL 81 82 82 VAL VAL A . n A 1 82 ILE 82 83 83 ILE ILE A . n A 1 83 ARG 83 84 84 ARG ARG A . n A 1 84 GLY 84 85 85 GLY GLY A . n A 1 85 LYS 85 86 86 LYS LYS A . n A 1 86 LYS 86 87 87 LYS LYS A . n A 1 87 GLY 87 88 88 GLY GLY A . n A 1 88 PRO 88 89 89 PRO PRO A . n A 1 89 GLY 89 90 90 GLY GLY A . n A 1 90 GLY 90 91 91 GLY GLY A . n A 1 91 VAL 91 92 92 VAL VAL A . n A 1 92 THR 92 93 93 THR THR A . n A 1 93 ILE 93 94 94 ILE ILE A . n A 1 94 LYS 94 95 95 LYS LYS A . n A 1 95 LYS 95 96 96 LYS LYS A . n A 1 96 THR 96 97 97 THR THR A . n A 1 97 ASN 97 98 98 ASN ASN A . n A 1 98 GLN 98 99 99 GLN GLN A . n A 1 99 ALA 99 100 100 ALA ALA A . n A 1 100 LEU 100 101 101 LEU LEU A . n A 1 101 VAL 101 102 102 VAL VAL A . n A 1 102 PHE 102 103 103 PHE PHE A . n A 1 103 GLY 103 104 104 GLY GLY A . n A 1 104 PHE 104 105 105 PHE PHE A . n A 1 105 TYR 105 106 106 TYR TYR A . n A 1 106 ASP 106 107 107 ASP ASP A . n A 1 107 GLU 107 108 108 GLU GLU A . n A 1 108 PRO 108 109 109 PRO PRO A . n A 1 109 MSE 109 110 110 MSE MSE A . n A 1 110 THR 110 111 111 THR THR A . n A 1 111 GLY 111 112 112 GLY GLY A . n A 1 112 GLY 112 113 113 GLY GLY A . n A 1 113 GLN 113 114 114 GLN GLN A . n A 1 114 CYS 114 115 115 CYS CYS A . n A 1 115 ASN 115 116 116 ASN ASN A . n A 1 116 LEU 116 117 117 LEU LEU A . n A 1 117 VAL 117 118 118 VAL VAL A . n A 1 118 VAL 118 119 119 VAL VAL A . n A 1 119 GLU 119 120 120 GLU GLU A . n A 1 120 ARG 120 121 121 ARG ARG A . n A 1 121 LEU 121 122 122 LEU LEU A . n A 1 122 GLY 122 123 123 GLY GLY A . n A 1 123 ASP 123 124 124 ASP ASP A . n A 1 124 TYR 124 125 125 TYR TYR A . n A 1 125 LEU 125 126 126 LEU LEU A . n A 1 126 ILE 126 127 127 ILE ILE A . n A 1 127 GLU 127 128 128 GLU GLU A . n A 1 128 SER 128 129 129 SER SER A . n A 1 129 GLU 129 130 130 GLU GLU A . n A 1 130 LEU 130 131 131 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 400 400 SO4 SO4 A . C 3 GOL 1 600 600 GOL GOL A . D 3 GOL 1 601 601 GOL GOL A . E 4 HOH 1 201 201 HOH HOH A . E 4 HOH 2 202 202 HOH HOH A . E 4 HOH 3 203 203 HOH HOH A . E 4 HOH 4 204 204 HOH HOH A . E 4 HOH 5 205 205 HOH HOH A . E 4 HOH 6 206 206 HOH HOH A . E 4 HOH 7 207 207 HOH HOH A . E 4 HOH 8 208 208 HOH HOH A . E 4 HOH 9 209 209 HOH HOH A . E 4 HOH 10 210 210 HOH HOH A . E 4 HOH 11 211 211 HOH HOH A . E 4 HOH 12 212 212 HOH HOH A . E 4 HOH 13 213 213 HOH HOH A . E 4 HOH 14 214 214 HOH HOH A . E 4 HOH 15 215 215 HOH HOH A . E 4 HOH 16 216 216 HOH HOH A . E 4 HOH 17 217 217 HOH HOH A . E 4 HOH 18 218 218 HOH HOH A . E 4 HOH 19 219 219 HOH HOH A . E 4 HOH 20 220 220 HOH HOH A . E 4 HOH 21 221 221 HOH HOH A . E 4 HOH 22 222 222 HOH HOH A . E 4 HOH 23 223 223 HOH HOH A . E 4 HOH 24 224 224 HOH HOH A . E 4 HOH 25 225 225 HOH HOH A . E 4 HOH 26 226 226 HOH HOH A . E 4 HOH 27 227 227 HOH HOH A . E 4 HOH 28 228 228 HOH HOH A . E 4 HOH 29 229 229 HOH HOH A . E 4 HOH 30 230 230 HOH HOH A . E 4 HOH 31 232 232 HOH HOH A . E 4 HOH 32 234 234 HOH HOH A . E 4 HOH 33 235 235 HOH HOH A . E 4 HOH 34 237 237 HOH HOH A . E 4 HOH 35 238 238 HOH HOH A . E 4 HOH 36 239 239 HOH HOH A . E 4 HOH 37 240 240 HOH HOH A . E 4 HOH 38 241 241 HOH HOH A . E 4 HOH 39 242 242 HOH HOH A . E 4 HOH 40 243 243 HOH HOH A . E 4 HOH 41 245 245 HOH HOH A . E 4 HOH 42 247 247 HOH HOH A . E 4 HOH 43 248 248 HOH HOH A . E 4 HOH 44 250 250 HOH HOH A . E 4 HOH 45 251 251 HOH HOH A . E 4 HOH 46 253 253 HOH HOH A . E 4 HOH 47 254 254 HOH HOH A . E 4 HOH 48 255 255 HOH HOH A . E 4 HOH 49 256 256 HOH HOH A . E 4 HOH 50 258 258 HOH HOH A . E 4 HOH 51 259 259 HOH HOH A . E 4 HOH 52 261 261 HOH HOH A . E 4 HOH 53 262 262 HOH HOH A . E 4 HOH 54 263 263 HOH HOH A . E 4 HOH 55 264 264 HOH HOH A . E 4 HOH 56 265 265 HOH HOH A . E 4 HOH 57 266 266 HOH HOH A . E 4 HOH 58 267 267 HOH HOH A . E 4 HOH 59 268 268 HOH HOH A . E 4 HOH 60 269 269 HOH HOH A . E 4 HOH 61 270 270 HOH HOH A . E 4 HOH 62 271 271 HOH HOH A . E 4 HOH 63 272 272 HOH HOH A . E 4 HOH 64 273 273 HOH HOH A . E 4 HOH 65 274 274 HOH HOH A . E 4 HOH 66 275 275 HOH HOH A . E 4 HOH 67 276 276 HOH HOH A . E 4 HOH 68 277 277 HOH HOH A . E 4 HOH 69 278 278 HOH HOH A . E 4 HOH 70 279 279 HOH HOH A . E 4 HOH 71 280 280 HOH HOH A . E 4 HOH 72 281 281 HOH HOH A . E 4 HOH 73 282 282 HOH HOH A . E 4 HOH 74 283 283 HOH HOH A . E 4 HOH 75 284 284 HOH HOH A . E 4 HOH 76 286 286 HOH HOH A . E 4 HOH 77 287 287 HOH HOH A . E 4 HOH 78 288 288 HOH HOH A . E 4 HOH 79 290 290 HOH HOH A . E 4 HOH 80 291 291 HOH HOH A . E 4 HOH 81 292 292 HOH HOH A . E 4 HOH 82 293 293 HOH HOH A . E 4 HOH 83 295 295 HOH HOH A . E 4 HOH 84 296 296 HOH HOH A . E 4 HOH 85 298 298 HOH HOH A . E 4 HOH 86 300 300 HOH HOH A . E 4 HOH 87 301 301 HOH HOH A . E 4 HOH 88 302 302 HOH HOH A . E 4 HOH 89 303 303 HOH HOH A . E 4 HOH 90 305 305 HOH HOH A . E 4 HOH 91 307 307 HOH HOH A . E 4 HOH 92 308 308 HOH HOH A . E 4 HOH 93 309 309 HOH HOH A . E 4 HOH 94 310 310 HOH HOH A . E 4 HOH 95 311 311 HOH HOH A . E 4 HOH 96 312 312 HOH HOH A . E 4 HOH 97 313 313 HOH HOH A . E 4 HOH 98 314 314 HOH HOH A . E 4 HOH 99 316 316 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 11 A MSE 12 ? MET SELENOMETHIONINE 2 A MSE 72 A MSE 73 ? MET SELENOMETHIONINE 3 A MSE 109 A MSE 110 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1997-12-03 2 'Structure model' 1 1 2008-03-25 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' 3.0 ? 1 X-PLOR refinement 3.0 ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 X-PLOR phasing 3.0 ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 H _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLY _pdbx_validate_close_contact.auth_seq_id_1 113 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 H2 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 237 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.27 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 PRO _pdbx_validate_rmsd_bond.auth_seq_id_1 89 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 A _pdbx_validate_rmsd_bond.auth_atom_id_2 N _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 GLY _pdbx_validate_rmsd_bond.auth_seq_id_2 90 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 A _pdbx_validate_rmsd_bond.bond_value 1.058 _pdbx_validate_rmsd_bond.bond_target_value 1.336 _pdbx_validate_rmsd_bond.bond_deviation -0.278 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.023 _pdbx_validate_rmsd_bond.linker_flag Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A PRO 89 ? A CA A PRO 89 ? A C A PRO 89 ? A 129.11 111.70 17.41 2.10 N 2 1 CA A PRO 89 ? A C A PRO 89 ? A N A GLY 90 ? A 128.34 116.20 12.14 2.00 Y 3 1 O A PRO 89 ? A C A PRO 89 ? A N A GLY 90 ? A 108.25 123.20 -14.95 1.70 Y 4 1 O A PRO 89 ? B C A PRO 89 ? B N A GLY 90 ? B 109.61 123.20 -13.59 1.70 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 89 ? A -63.64 2.99 2 1 PRO A 89 ? B -95.32 34.97 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 PRO A 89 ? A -14.21 2 1 PRO A 89 ? B 14.58 # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 C _pdbx_validate_polymer_linkage.auth_asym_id_1 A _pdbx_validate_polymer_linkage.auth_comp_id_1 PRO _pdbx_validate_polymer_linkage.auth_seq_id_1 89 _pdbx_validate_polymer_linkage.PDB_ins_code_1 ? _pdbx_validate_polymer_linkage.label_alt_id_1 A _pdbx_validate_polymer_linkage.auth_atom_id_2 N _pdbx_validate_polymer_linkage.auth_asym_id_2 A _pdbx_validate_polymer_linkage.auth_comp_id_2 GLY _pdbx_validate_polymer_linkage.auth_seq_id_2 90 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 A _pdbx_validate_polymer_linkage.dist 1.06 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 GLYCEROL GOL 4 water HOH #