HEADER ANTIVIRAL PROTEIN 09-JUL-10 3NWH TITLE CRYSTAL STRUCTURE OF BST2/TETHERIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: BONE MARROW STROMAL ANTIGEN 2; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: EXTRACELLULAR DOMAIN (UNP RESIDUES 47-152); COMPND 5 SYNONYM: BST-2, TETHERIN, HM1.24 ANTIGEN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BST2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PTOPO KEYWDS COILED-COIL, INNATE IMMUNITY, ANTIVIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.L.SCHUBERT,Q.ZHAI,C.P.HILL REVDAT 4 08-NOV-17 3NWH 1 REMARK REVDAT 3 03-NOV-10 3NWH 1 JRNL REVDAT 2 13-OCT-10 3NWH 1 JRNL REVDAT 1 21-JUL-10 3NWH 0 SPRSDE 21-JUL-10 3NWH 3MKX JRNL AUTH H.L.SCHUBERT,Q.ZHAI,V.SANDRIN,D.M.ECKERT,M.GARCIA-MAYA, JRNL AUTH 2 L.SAUL,W.I.SUNDQUIST,R.A.STEINER,C.P.HILL JRNL TITL STRUCTURAL AND FUNCTIONAL STUDIES ON THE EXTRACELLULAR JRNL TITL 2 DOMAIN OF BST2/TETHERIN IN REDUCED AND OXIDIZED JRNL TITL 3 CONFORMATIONS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 107 17951 2010 JRNL REFN ISSN 0027-8424 JRNL PMID 20880831 JRNL DOI 10.1073/PNAS.1008206107 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0074 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.13 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 15096 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.262 REMARK 3 R VALUE (WORKING SET) : 0.260 REMARK 3 FREE R VALUE : 0.288 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.600 REMARK 3 FREE R VALUE TEST SET COUNT : 1147 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 949 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.35 REMARK 3 BIN R VALUE (WORKING SET) : 0.3810 REMARK 3 BIN FREE R VALUE SET COUNT : 81 REMARK 3 BIN FREE R VALUE : 0.5110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3212 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 18 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.17000 REMARK 3 B22 (A**2) : 3.31000 REMARK 3 B33 (A**2) : -2.38000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -4.46000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.346 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.375 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.275 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 28.516 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.928 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.916 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3267 ; 0.018 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2211 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4390 ; 1.614 ; 1.953 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5424 ; 2.903 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 421 ; 5.343 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 176 ;38.173 ;25.568 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 649 ;22.689 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;23.294 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 512 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3686 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 584 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 48 A 151 REMARK 3 ORIGIN FOR THE GROUP (A): -18.5865 54.3266 79.2680 REMARK 3 T TENSOR REMARK 3 T11: 0.1614 T22: 0.3082 REMARK 3 T33: 0.2711 T12: -0.0352 REMARK 3 T13: 0.0903 T23: -0.0071 REMARK 3 L TENSOR REMARK 3 L11: 10.9481 L22: 0.2991 REMARK 3 L33: 20.7993 L12: 0.8437 REMARK 3 L13: 15.0242 L23: 1.1145 REMARK 3 S TENSOR REMARK 3 S11: 0.3638 S12: 0.0167 S13: -0.1324 REMARK 3 S21: 0.0846 S22: -0.0926 S23: -0.1153 REMARK 3 S31: 0.5426 S32: 0.0981 S33: -0.2712 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 48 B 151 REMARK 3 ORIGIN FOR THE GROUP (A): -79.4784 47.4066 2.6288 REMARK 3 T TENSOR REMARK 3 T11: 0.3631 T22: 0.6107 REMARK 3 T33: 0.3752 T12: 0.0952 REMARK 3 T13: 0.0429 T23: -0.1043 REMARK 3 L TENSOR REMARK 3 L11: 16.2250 L22: 0.1993 REMARK 3 L33: 22.2689 L12: 1.3124 REMARK 3 L13: 18.9968 L23: 1.5163 REMARK 3 S TENSOR REMARK 3 S11: -0.5835 S12: 0.4095 S13: 0.6715 REMARK 3 S21: -0.1760 S22: -0.1631 S23: 0.1155 REMARK 3 S31: -0.6021 S32: 0.4467 S33: 0.7466 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 48 C 151 REMARK 3 ORIGIN FOR THE GROUP (A): -21.7974 54.6546 80.9322 REMARK 3 T TENSOR REMARK 3 T11: 0.2990 T22: 0.2866 REMARK 3 T33: 0.3395 T12: -0.0503 REMARK 3 T13: 0.0003 T23: 0.0524 REMARK 3 L TENSOR REMARK 3 L11: 13.7859 L22: 0.7683 REMARK 3 L33: 15.5882 L12: 2.9274 REMARK 3 L13: 14.6360 L23: 3.1403 REMARK 3 S TENSOR REMARK 3 S11: -0.8092 S12: -0.3512 S13: 0.7638 REMARK 3 S21: -0.1309 S22: -0.0482 S23: 0.1255 REMARK 3 S31: -0.9272 S32: -0.3044 S33: 0.8574 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 50 D 150 REMARK 3 ORIGIN FOR THE GROUP (A): -81.7650 47.0522 5.5350 REMARK 3 T TENSOR REMARK 3 T11: 0.3921 T22: 0.5039 REMARK 3 T33: 0.3502 T12: 0.0112 REMARK 3 T13: -0.0081 T23: -0.0376 REMARK 3 L TENSOR REMARK 3 L11: 9.9053 L22: 0.6519 REMARK 3 L33: 21.2804 L12: 2.1265 REMARK 3 L13: 14.5075 L23: 3.1832 REMARK 3 S TENSOR REMARK 3 S11: 0.7751 S12: 0.1456 S13: -0.4596 REMARK 3 S21: 0.0274 S22: -0.1451 S23: 0.0522 REMARK 3 S31: 1.1209 S32: 0.1012 S33: -0.6301 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 3NWH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1000060365. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9805, 0.9919, 0.9809 REMARK 200 MONOCHROMATOR : SIDE SCATTERING I-BEAM BENT REMARK 200 SINGLE CRYSTAL; ASYMMETRIC CUT REMARK 200 4.9650 DEG REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15096 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.26900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.980 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG MME 2K, PH 7.2, VAPOR DIFFUSION, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 29.79200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -146.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 41 REMARK 465 ILE A 42 REMARK 465 ASP A 43 REMARK 465 PRO A 44 REMARK 465 PHE A 45 REMARK 465 THR A 46 REMARK 465 LYS A 47 REMARK 465 GLY B 41 REMARK 465 ILE B 42 REMARK 465 ASP B 43 REMARK 465 PRO B 44 REMARK 465 PHE B 45 REMARK 465 THR B 46 REMARK 465 LYS B 152 REMARK 465 GLY C 41 REMARK 465 ILE C 42 REMARK 465 ASP C 43 REMARK 465 PRO C 44 REMARK 465 PHE C 45 REMARK 465 THR C 46 REMARK 465 LYS C 47 REMARK 465 LYS C 152 REMARK 465 GLY D 41 REMARK 465 ILE D 42 REMARK 465 ASP D 43 REMARK 465 PRO D 44 REMARK 465 PHE D 45 REMARK 465 THR D 46 REMARK 465 LYS D 47 REMARK 465 ALA D 48 REMARK 465 ASN D 49 REMARK 465 LYS D 151 REMARK 465 LYS D 152 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 70 CB - CG - CD2 ANGL. DEV. = -10.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 49 -87.02 -55.03 REMARK 500 VAL B 113 -49.19 -135.04 REMARK 500 HIS B 125 -70.87 -58.50 REMARK 500 GLU C 115 -70.95 -38.17 REMARK 500 ILE D 120 -74.87 -54.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2XG7 RELATED DB: PDB REMARK 900 OXIDIZED DIMERIC STRUCTURE OF TETHERIN DBREF 3NWH A 47 152 UNP Q10589 BST2_HUMAN 47 152 DBREF 3NWH B 47 152 UNP Q10589 BST2_HUMAN 47 152 DBREF 3NWH C 47 152 UNP Q10589 BST2_HUMAN 47 152 DBREF 3NWH D 47 152 UNP Q10589 BST2_HUMAN 47 152 SEQADV 3NWH GLY A 41 UNP Q10589 EXPRESSION TAG SEQADV 3NWH ILE A 42 UNP Q10589 EXPRESSION TAG SEQADV 3NWH ASP A 43 UNP Q10589 EXPRESSION TAG SEQADV 3NWH PRO A 44 UNP Q10589 EXPRESSION TAG SEQADV 3NWH PHE A 45 UNP Q10589 EXPRESSION TAG SEQADV 3NWH THR A 46 UNP Q10589 EXPRESSION TAG SEQADV 3NWH GLY B 41 UNP Q10589 EXPRESSION TAG SEQADV 3NWH ILE B 42 UNP Q10589 EXPRESSION TAG SEQADV 3NWH ASP B 43 UNP Q10589 EXPRESSION TAG SEQADV 3NWH PRO B 44 UNP Q10589 EXPRESSION TAG SEQADV 3NWH PHE B 45 UNP Q10589 EXPRESSION TAG SEQADV 3NWH THR B 46 UNP Q10589 EXPRESSION TAG SEQADV 3NWH GLY C 41 UNP Q10589 EXPRESSION TAG SEQADV 3NWH ILE C 42 UNP Q10589 EXPRESSION TAG SEQADV 3NWH ASP C 43 UNP Q10589 EXPRESSION TAG SEQADV 3NWH PRO C 44 UNP Q10589 EXPRESSION TAG SEQADV 3NWH PHE C 45 UNP Q10589 EXPRESSION TAG SEQADV 3NWH THR C 46 UNP Q10589 EXPRESSION TAG SEQADV 3NWH GLY D 41 UNP Q10589 EXPRESSION TAG SEQADV 3NWH ILE D 42 UNP Q10589 EXPRESSION TAG SEQADV 3NWH ASP D 43 UNP Q10589 EXPRESSION TAG SEQADV 3NWH PRO D 44 UNP Q10589 EXPRESSION TAG SEQADV 3NWH PHE D 45 UNP Q10589 EXPRESSION TAG SEQADV 3NWH THR D 46 UNP Q10589 EXPRESSION TAG SEQRES 1 A 112 GLY ILE ASP PRO PHE THR LYS ALA ASN SER GLU ALA CYS SEQRES 2 A 112 ARG ASP GLY LEU ARG ALA VAL MSE GLU CYS ARG ASN VAL SEQRES 3 A 112 THR HIS LEU LEU GLN GLN GLU LEU THR GLU ALA GLN LYS SEQRES 4 A 112 GLY PHE GLN ASP VAL GLU ALA GLN ALA ALA THR CYS ASN SEQRES 5 A 112 HIS THR VAL MSE ALA LEU MSE ALA SER LEU ASP ALA GLU SEQRES 6 A 112 LYS ALA GLN GLY GLN LYS LYS VAL GLU GLU LEU GLU GLY SEQRES 7 A 112 GLU ILE THR THR LEU ASN HIS LYS LEU GLN ASP ALA SER SEQRES 8 A 112 ALA GLU VAL GLU ARG LEU ARG ARG GLU ASN GLN VAL LEU SEQRES 9 A 112 SER VAL ARG ILE ALA ASP LYS LYS SEQRES 1 B 112 GLY ILE ASP PRO PHE THR LYS ALA ASN SER GLU ALA CYS SEQRES 2 B 112 ARG ASP GLY LEU ARG ALA VAL MSE GLU CYS ARG ASN VAL SEQRES 3 B 112 THR HIS LEU LEU GLN GLN GLU LEU THR GLU ALA GLN LYS SEQRES 4 B 112 GLY PHE GLN ASP VAL GLU ALA GLN ALA ALA THR CYS ASN SEQRES 5 B 112 HIS THR VAL MSE ALA LEU MSE ALA SER LEU ASP ALA GLU SEQRES 6 B 112 LYS ALA GLN GLY GLN LYS LYS VAL GLU GLU LEU GLU GLY SEQRES 7 B 112 GLU ILE THR THR LEU ASN HIS LYS LEU GLN ASP ALA SER SEQRES 8 B 112 ALA GLU VAL GLU ARG LEU ARG ARG GLU ASN GLN VAL LEU SEQRES 9 B 112 SER VAL ARG ILE ALA ASP LYS LYS SEQRES 1 C 112 GLY ILE ASP PRO PHE THR LYS ALA ASN SER GLU ALA CYS SEQRES 2 C 112 ARG ASP GLY LEU ARG ALA VAL MSE GLU CYS ARG ASN VAL SEQRES 3 C 112 THR HIS LEU LEU GLN GLN GLU LEU THR GLU ALA GLN LYS SEQRES 4 C 112 GLY PHE GLN ASP VAL GLU ALA GLN ALA ALA THR CYS ASN SEQRES 5 C 112 HIS THR VAL MSE ALA LEU MSE ALA SER LEU ASP ALA GLU SEQRES 6 C 112 LYS ALA GLN GLY GLN LYS LYS VAL GLU GLU LEU GLU GLY SEQRES 7 C 112 GLU ILE THR THR LEU ASN HIS LYS LEU GLN ASP ALA SER SEQRES 8 C 112 ALA GLU VAL GLU ARG LEU ARG ARG GLU ASN GLN VAL LEU SEQRES 9 C 112 SER VAL ARG ILE ALA ASP LYS LYS SEQRES 1 D 112 GLY ILE ASP PRO PHE THR LYS ALA ASN SER GLU ALA CYS SEQRES 2 D 112 ARG ASP GLY LEU ARG ALA VAL MSE GLU CYS ARG ASN VAL SEQRES 3 D 112 THR HIS LEU LEU GLN GLN GLU LEU THR GLU ALA GLN LYS SEQRES 4 D 112 GLY PHE GLN ASP VAL GLU ALA GLN ALA ALA THR CYS ASN SEQRES 5 D 112 HIS THR VAL MSE ALA LEU MSE ALA SER LEU ASP ALA GLU SEQRES 6 D 112 LYS ALA GLN GLY GLN LYS LYS VAL GLU GLU LEU GLU GLY SEQRES 7 D 112 GLU ILE THR THR LEU ASN HIS LYS LEU GLN ASP ALA SER SEQRES 8 D 112 ALA GLU VAL GLU ARG LEU ARG ARG GLU ASN GLN VAL LEU SEQRES 9 D 112 SER VAL ARG ILE ALA ASP LYS LYS MODRES 3NWH MSE A 61 MET SELENOMETHIONINE MODRES 3NWH MSE A 96 MET SELENOMETHIONINE MODRES 3NWH MSE A 99 MET SELENOMETHIONINE MODRES 3NWH MSE B 61 MET SELENOMETHIONINE MODRES 3NWH MSE B 96 MET SELENOMETHIONINE MODRES 3NWH MSE B 99 MET SELENOMETHIONINE MODRES 3NWH MSE C 61 MET SELENOMETHIONINE MODRES 3NWH MSE C 96 MET SELENOMETHIONINE MODRES 3NWH MSE C 99 MET SELENOMETHIONINE MODRES 3NWH MSE D 61 MET SELENOMETHIONINE MODRES 3NWH MSE D 96 MET SELENOMETHIONINE MODRES 3NWH MSE D 99 MET SELENOMETHIONINE HET MSE A 61 8 HET MSE A 96 8 HET MSE A 99 8 HET MSE B 61 8 HET MSE B 96 8 HET MSE B 99 8 HET MSE C 61 8 HET MSE C 96 8 HET MSE C 99 8 HET MSE D 61 8 HET MSE D 96 8 HET MSE D 99 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 5 HOH *18(H2 O) HELIX 1 1 SER A 50 ASP A 150 1 101 HELIX 2 2 ALA B 48 LYS B 112 1 65 HELIX 3 3 GLU B 115 ASP B 150 1 36 HELIX 4 4 ALA C 48 LYS C 151 1 104 HELIX 5 5 SER D 50 ASP D 150 1 101 LINK C VAL A 60 N MSE A 61 1555 1555 1.32 LINK C MSE A 61 N GLU A 62 1555 1555 1.32 LINK C VAL A 95 N MSE A 96 1555 1555 1.32 LINK C MSE A 96 N ALA A 97 1555 1555 1.31 LINK C LEU A 98 N MSE A 99 1555 1555 1.32 LINK C MSE A 99 N ALA A 100 1555 1555 1.31 LINK C VAL B 60 N MSE B 61 1555 1555 1.31 LINK C MSE B 61 N GLU B 62 1555 1555 1.32 LINK C VAL B 95 N MSE B 96 1555 1555 1.32 LINK C MSE B 96 N ALA B 97 1555 1555 1.33 LINK C LEU B 98 N MSE B 99 1555 1555 1.32 LINK C MSE B 99 N ALA B 100 1555 1555 1.32 LINK C VAL C 60 N MSE C 61 1555 1555 1.32 LINK C MSE C 61 N GLU C 62 1555 1555 1.32 LINK C VAL C 95 N MSE C 96 1555 1555 1.33 LINK C MSE C 96 N ALA C 97 1555 1555 1.33 LINK C LEU C 98 N MSE C 99 1555 1555 1.32 LINK C MSE C 99 N ALA C 100 1555 1555 1.32 LINK C VAL D 60 N MSE D 61 1555 1555 1.31 LINK C MSE D 61 N GLU D 62 1555 1555 1.31 LINK C VAL D 95 N MSE D 96 1555 1555 1.31 LINK C MSE D 96 N ALA D 97 1555 1555 1.32 LINK C LEU D 98 N MSE D 99 1555 1555 1.32 LINK C MSE D 99 N ALA D 100 1555 1555 1.32 CRYST1 26.550 59.584 159.473 90.00 91.56 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.037665 0.000000 0.001022 0.00000 SCALE2 0.000000 0.016783 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006273 0.00000