HEADER OXIDOREDUCTASE 12-JUL-10 3NX4 TITLE CRYSTAL STRUCTURE OF THE YHDH OXIDOREDUCTASE FROM SALMONELLA ENTERICA TITLE 2 IN COMPLEX WITH NADP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE OXIDOREDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 3 TYPHIMURIUM; SOURCE 4 ORGANISM_TAXID: 99287; SOURCE 5 STRAIN: LT2; SOURCE 6 GENE: YHDH, STM3376; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIL KEYWDS OXIDOREDUCTASE, CSGID, STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS OF INFECTIOUS DISEASES, PSI, PROTEIN STRUCTURE INITIATIVE EXPDTA X-RAY DIFFRACTION AUTHOR S.M.ANDERSON,Z.WAWRZAK,S.PETERSON,O.ONOPRIYENKO,T.SKARINA, AUTHOR 2 W.F.ANDERSON,A.SAVCHENKO,CENTER FOR STRUCTURAL GENOMICS OF AUTHOR 3 INFECTIOUS DISEASES (CSGID) REVDAT 3 06-NOV-24 3NX4 1 REMARK SEQADV LINK REVDAT 2 08-NOV-17 3NX4 1 REMARK REVDAT 1 04-AUG-10 3NX4 0 JRNL AUTH S.M.ANDERSON,Z.WAWRZAK,S.PETERSON,O.ONOPRIYENKO,T.SKARINA, JRNL AUTH 2 W.F.ANDERSON,A.SAVCHENKO JRNL TITL CRYSTAL STRUCTURE OF THE YHDH OXIDOREDUCTASE FROM SALMONELLA JRNL TITL 2 ENTERICA IN COMPLEX WITH NADP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6.2_432 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.04 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.440 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 51577 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.870 REMARK 3 FREE R VALUE TEST SET COUNT : 1994 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.0493 - 4.0918 0.99 5249 273 0.1422 0.1752 REMARK 3 2 4.0918 - 3.2484 0.99 5205 271 0.1313 0.1528 REMARK 3 3 3.2484 - 2.8379 0.99 5160 268 0.1495 0.1889 REMARK 3 4 2.8379 - 2.5785 0.99 5129 267 0.1546 0.1966 REMARK 3 5 2.5785 - 2.3937 0.98 5149 268 0.1600 0.2097 REMARK 3 6 2.3937 - 2.2526 0.98 5094 265 0.1598 0.2001 REMARK 3 7 2.2526 - 2.1398 0.95 4918 256 0.1663 0.2136 REMARK 3 8 2.1398 - 2.0467 0.92 4769 248 0.1891 0.2314 REMARK 3 9 2.0467 - 1.9679 0.88 4555 237 0.2249 0.2681 REMARK 3 10 1.9679 - 1.9000 0.84 4355 227 0.2663 0.2967 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 73.31 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.080 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.42 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.60380 REMARK 3 B22 (A**2) : -6.58560 REMARK 3 B33 (A**2) : 1.98180 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 18.62040 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5047 REMARK 3 ANGLE : 1.120 6872 REMARK 3 CHIRALITY : 0.073 784 REMARK 3 PLANARITY : 0.005 879 REMARK 3 DIHEDRAL : 15.530 1832 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:54) REMARK 3 ORIGIN FOR THE GROUP (A): 21.7531 50.6581 -10.5220 REMARK 3 T TENSOR REMARK 3 T11: 0.5881 T22: 0.5566 REMARK 3 T33: 0.3133 T12: 0.2884 REMARK 3 T13: 0.0024 T23: 0.0657 REMARK 3 L TENSOR REMARK 3 L11: 0.2193 L22: 0.3303 REMARK 3 L33: 0.8486 L12: -0.0119 REMARK 3 L13: 0.0635 L23: 0.0764 REMARK 3 S TENSOR REMARK 3 S11: 0.4290 S12: 0.4492 S13: 0.1069 REMARK 3 S21: -0.5605 S22: -0.3714 S23: -0.0397 REMARK 3 S31: -0.2287 S32: -0.7127 S33: -0.0078 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 55:73) REMARK 3 ORIGIN FOR THE GROUP (A): 20.7697 54.8867 -4.1814 REMARK 3 T TENSOR REMARK 3 T11: 0.4193 T22: 0.4389 REMARK 3 T33: 0.2852 T12: 0.2347 REMARK 3 T13: 0.0564 T23: 0.1171 REMARK 3 L TENSOR REMARK 3 L11: 0.5836 L22: 0.6954 REMARK 3 L33: 0.3180 L12: -0.0874 REMARK 3 L13: 0.1858 L23: 0.3295 REMARK 3 S TENSOR REMARK 3 S11: 0.4014 S12: 0.1705 S13: 0.3959 REMARK 3 S21: -0.0910 S22: -0.1689 S23: -0.2332 REMARK 3 S31: -0.2388 S32: -0.3602 S33: 0.0071 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 74:205) REMARK 3 ORIGIN FOR THE GROUP (A): 32.1167 40.6464 5.8148 REMARK 3 T TENSOR REMARK 3 T11: 0.2032 T22: 0.1787 REMARK 3 T33: 0.2091 T12: 0.0558 REMARK 3 T13: 0.0029 T23: 0.0160 REMARK 3 L TENSOR REMARK 3 L11: 0.9322 L22: 0.8112 REMARK 3 L33: 1.4733 L12: -0.1891 REMARK 3 L13: -0.7548 L23: -0.1918 REMARK 3 S TENSOR REMARK 3 S11: 0.1015 S12: 0.0710 S13: 0.1259 REMARK 3 S21: -0.1098 S22: -0.0492 S23: -0.1744 REMARK 3 S31: -0.0615 S32: -0.1774 S33: -0.0009 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 206:324) REMARK 3 ORIGIN FOR THE GROUP (A): 29.0350 34.1658 5.7172 REMARK 3 T TENSOR REMARK 3 T11: 0.2490 T22: 0.2410 REMARK 3 T33: 0.1930 T12: 0.0352 REMARK 3 T13: -0.0150 T23: -0.0091 REMARK 3 L TENSOR REMARK 3 L11: 0.8442 L22: 1.2227 REMARK 3 L33: 1.3803 L12: -0.3019 REMARK 3 L13: -0.8058 L23: -0.3941 REMARK 3 S TENSOR REMARK 3 S11: 0.1052 S12: 0.1576 S13: 0.0229 REMARK 3 S21: -0.2540 S22: -0.1041 S23: -0.1198 REMARK 3 S31: 0.0755 S32: -0.3279 S33: 0.0057 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN B AND RESID 1:54) REMARK 3 ORIGIN FOR THE GROUP (A): 14.4517 -0.5055 34.1869 REMARK 3 T TENSOR REMARK 3 T11: 0.6533 T22: 0.2302 REMARK 3 T33: 0.6414 T12: -0.1713 REMARK 3 T13: 0.2342 T23: -0.1790 REMARK 3 L TENSOR REMARK 3 L11: 2.1125 L22: 0.1536 REMARK 3 L33: 1.0570 L12: -0.1434 REMARK 3 L13: -1.1280 L23: 0.3331 REMARK 3 S TENSOR REMARK 3 S11: -0.5032 S12: 0.1134 S13: -1.2397 REMARK 3 S21: 0.1520 S22: -0.1311 S23: -0.0053 REMARK 3 S31: 0.9578 S32: -0.1772 S33: -0.1493 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 55:73) REMARK 3 ORIGIN FOR THE GROUP (A): 19.7961 3.8103 37.5596 REMARK 3 T TENSOR REMARK 3 T11: 0.5016 T22: 0.2644 REMARK 3 T33: 0.5170 T12: -0.0057 REMARK 3 T13: 0.1707 T23: -0.0489 REMARK 3 L TENSOR REMARK 3 L11: 0.2575 L22: 0.0514 REMARK 3 L33: 0.1086 L12: -0.0100 REMARK 3 L13: 0.1086 L23: 0.0070 REMARK 3 S TENSOR REMARK 3 S11: -0.2850 S12: 0.0236 S13: -0.6782 REMARK 3 S21: -0.0072 S22: -0.1020 S23: -0.1107 REMARK 3 S31: 0.6246 S32: 0.1655 S33: 0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN B AND RESID 74:205) REMARK 3 ORIGIN FOR THE GROUP (A): 10.1140 20.9979 31.2158 REMARK 3 T TENSOR REMARK 3 T11: 0.1483 T22: 0.2709 REMARK 3 T33: 0.2174 T12: -0.0659 REMARK 3 T13: 0.0012 T23: -0.0456 REMARK 3 L TENSOR REMARK 3 L11: 1.4527 L22: 0.5339 REMARK 3 L33: 2.4288 L12: -0.1032 REMARK 3 L13: -0.5591 L23: -1.0862 REMARK 3 S TENSOR REMARK 3 S11: -0.1145 S12: 0.1512 S13: -0.1311 REMARK 3 S21: 0.2038 S22: 0.1261 S23: 0.0513 REMARK 3 S31: 0.1732 S32: -0.4763 S33: -0.0021 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 206:324) REMARK 3 ORIGIN FOR THE GROUP (A): 9.6433 21.5050 24.1639 REMARK 3 T TENSOR REMARK 3 T11: 0.1798 T22: 0.3557 REMARK 3 T33: 0.2194 T12: -0.0906 REMARK 3 T13: -0.0333 T23: -0.0367 REMARK 3 L TENSOR REMARK 3 L11: 1.0044 L22: 0.4092 REMARK 3 L33: 1.9325 L12: 0.1900 REMARK 3 L13: -1.3338 L23: -0.2767 REMARK 3 S TENSOR REMARK 3 S11: -0.0609 S12: 0.3084 S13: -0.0695 REMARK 3 S21: 0.0303 S22: 0.0378 S23: 0.0748 REMARK 3 S31: 0.1321 S32: -0.5447 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3NX4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1000060388. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-APR-10 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : C(111) DIAMOND LAUE REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : BERYLLIUM LENS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51747 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 200 DATA REDUNDANCY : 9.400 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.54600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.560 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, 200MM AMMONIUM CITRATE, REMARK 280 10MM NADP, PH 7, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 51.60900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 61.18200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 51.60900 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 61.18200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 10 81.00 -157.87 REMARK 500 ASP A 221 -137.07 55.87 REMARK 500 LEU A 242 25.47 -151.51 REMARK 500 ASP B 221 -138.49 54.46 REMARK 500 LEU B 242 29.73 -149.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A 330 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP B 330 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP00076 RELATED DB: TARGETDB DBREF 3NX4 A 2 324 UNP Q7CPM2 Q7CPM2_SALTY 2 324 DBREF 3NX4 B 2 324 UNP Q7CPM2 Q7CPM2_SALTY 2 324 SEQADV 3NX4 MSE A 1 UNP Q7CPM2 INITIATING METHIONINE SEQADV 3NX4 MSE B 1 UNP Q7CPM2 INITIATING METHIONINE SEQRES 1 A 324 MSE GLN ALA LEU ILE LEU GLU GLN GLN ASP GLY LYS THR SEQRES 2 A 324 LEU ALA SER VAL GLN HIS LEU GLU GLU SER GLN LEU PRO SEQRES 3 A 324 ALA GLY ASP VAL THR VAL ASP VAL HIS TRP SER SER LEU SEQRES 4 A 324 ASN TYR LYS ASP ALA LEU ALA ILE THR GLY LYS GLY LYS SEQRES 5 A 324 ILE ILE ARG HIS PHE PRO MSE ILE PRO GLY ILE ASP PHE SEQRES 6 A 324 ALA GLY THR VAL HIS ALA SER GLU ASP PRO ARG PHE HIS SEQRES 7 A 324 ALA GLY GLN GLU VAL LEU LEU THR GLY TRP GLY VAL GLY SEQRES 8 A 324 GLU ASN HIS TRP GLY GLY LEU ALA GLU ARG ALA ARG VAL SEQRES 9 A 324 LYS GLY ASP TRP LEU VAL ALA LEU PRO ALA GLY LEU SER SEQRES 10 A 324 SER ARG ASN ALA MSE ILE ILE GLY THR ALA GLY PHE THR SEQRES 11 A 324 ALA MSE LEU CYS VAL MSE ALA LEU GLU ASP ALA GLY ILE SEQRES 12 A 324 ARG PRO GLN ASP GLY GLU VAL VAL VAL THR GLY ALA SER SEQRES 13 A 324 GLY GLY VAL GLY SER THR ALA VAL ALA LEU LEU HIS LYS SEQRES 14 A 324 LEU GLY TYR GLN VAL ALA ALA VAL SER GLY ARG GLU SER SEQRES 15 A 324 THR HIS GLY TYR LEU LYS SER LEU GLY ALA ASN ARG ILE SEQRES 16 A 324 LEU SER ARG ASP GLU PHE ALA GLU SER ARG PRO LEU GLU SEQRES 17 A 324 LYS GLN LEU TRP ALA GLY ALA ILE ASP THR VAL GLY ASP SEQRES 18 A 324 LYS VAL LEU ALA LYS VAL LEU ALA GLN MSE ASN TYR GLY SEQRES 19 A 324 GLY CYS VAL ALA ALA CYS GLY LEU ALA GLY GLY PHE ALA SEQRES 20 A 324 LEU PRO THR THR VAL MSE PRO PHE ILE LEU ARG ASN VAL SEQRES 21 A 324 ARG LEU GLN GLY VAL ASP SER VAL MSE THR PRO PRO ALA SEQRES 22 A 324 ARG ARG ALA GLU ALA TRP ALA ARG LEU VAL LYS ASP LEU SEQRES 23 A 324 PRO GLU SER PHE TYR ALA GLN ALA ALA THR GLU ILE THR SEQRES 24 A 324 LEU ALA ASP ALA PRO LYS PHE ALA ASP ALA ILE ILE ASN SEQRES 25 A 324 ASN GLN VAL GLN GLY ARG THR LEU VAL LYS ILE LYS SEQRES 1 B 324 MSE GLN ALA LEU ILE LEU GLU GLN GLN ASP GLY LYS THR SEQRES 2 B 324 LEU ALA SER VAL GLN HIS LEU GLU GLU SER GLN LEU PRO SEQRES 3 B 324 ALA GLY ASP VAL THR VAL ASP VAL HIS TRP SER SER LEU SEQRES 4 B 324 ASN TYR LYS ASP ALA LEU ALA ILE THR GLY LYS GLY LYS SEQRES 5 B 324 ILE ILE ARG HIS PHE PRO MSE ILE PRO GLY ILE ASP PHE SEQRES 6 B 324 ALA GLY THR VAL HIS ALA SER GLU ASP PRO ARG PHE HIS SEQRES 7 B 324 ALA GLY GLN GLU VAL LEU LEU THR GLY TRP GLY VAL GLY SEQRES 8 B 324 GLU ASN HIS TRP GLY GLY LEU ALA GLU ARG ALA ARG VAL SEQRES 9 B 324 LYS GLY ASP TRP LEU VAL ALA LEU PRO ALA GLY LEU SER SEQRES 10 B 324 SER ARG ASN ALA MSE ILE ILE GLY THR ALA GLY PHE THR SEQRES 11 B 324 ALA MSE LEU CYS VAL MSE ALA LEU GLU ASP ALA GLY ILE SEQRES 12 B 324 ARG PRO GLN ASP GLY GLU VAL VAL VAL THR GLY ALA SER SEQRES 13 B 324 GLY GLY VAL GLY SER THR ALA VAL ALA LEU LEU HIS LYS SEQRES 14 B 324 LEU GLY TYR GLN VAL ALA ALA VAL SER GLY ARG GLU SER SEQRES 15 B 324 THR HIS GLY TYR LEU LYS SER LEU GLY ALA ASN ARG ILE SEQRES 16 B 324 LEU SER ARG ASP GLU PHE ALA GLU SER ARG PRO LEU GLU SEQRES 17 B 324 LYS GLN LEU TRP ALA GLY ALA ILE ASP THR VAL GLY ASP SEQRES 18 B 324 LYS VAL LEU ALA LYS VAL LEU ALA GLN MSE ASN TYR GLY SEQRES 19 B 324 GLY CYS VAL ALA ALA CYS GLY LEU ALA GLY GLY PHE ALA SEQRES 20 B 324 LEU PRO THR THR VAL MSE PRO PHE ILE LEU ARG ASN VAL SEQRES 21 B 324 ARG LEU GLN GLY VAL ASP SER VAL MSE THR PRO PRO ALA SEQRES 22 B 324 ARG ARG ALA GLU ALA TRP ALA ARG LEU VAL LYS ASP LEU SEQRES 23 B 324 PRO GLU SER PHE TYR ALA GLN ALA ALA THR GLU ILE THR SEQRES 24 B 324 LEU ALA ASP ALA PRO LYS PHE ALA ASP ALA ILE ILE ASN SEQRES 25 B 324 ASN GLN VAL GLN GLY ARG THR LEU VAL LYS ILE LYS MODRES 3NX4 MSE A 1 MET SELENOMETHIONINE MODRES 3NX4 MSE A 59 MET SELENOMETHIONINE MODRES 3NX4 MSE A 122 MET SELENOMETHIONINE MODRES 3NX4 MSE A 132 MET SELENOMETHIONINE MODRES 3NX4 MSE A 136 MET SELENOMETHIONINE MODRES 3NX4 MSE A 231 MET SELENOMETHIONINE MODRES 3NX4 MSE A 253 MET SELENOMETHIONINE MODRES 3NX4 MSE A 269 MET SELENOMETHIONINE MODRES 3NX4 MSE B 1 MET SELENOMETHIONINE MODRES 3NX4 MSE B 59 MET SELENOMETHIONINE MODRES 3NX4 MSE B 122 MET SELENOMETHIONINE MODRES 3NX4 MSE B 132 MET SELENOMETHIONINE MODRES 3NX4 MSE B 136 MET SELENOMETHIONINE MODRES 3NX4 MSE B 231 MET SELENOMETHIONINE MODRES 3NX4 MSE B 253 MET SELENOMETHIONINE MODRES 3NX4 MSE B 269 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 59 8 HET MSE A 122 8 HET MSE A 132 8 HET MSE A 136 8 HET MSE A 231 8 HET MSE A 253 8 HET MSE A 269 13 HET MSE B 1 8 HET MSE B 59 8 HET MSE B 122 8 HET MSE B 132 8 HET MSE B 136 8 HET MSE B 231 8 HET MSE B 253 8 HET MSE B 269 8 HET NAP A 330 48 HET NAP B 330 48 HETNAM MSE SELENOMETHIONINE HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 1 MSE 16(C5 H11 N O2 SE) FORMUL 3 NAP 2(C21 H28 N7 O17 P3) FORMUL 5 HOH *404(H2 O) HELIX 1 1 GLU A 21 LEU A 25 5 5 HELIX 2 2 ASN A 40 GLY A 49 1 10 HELIX 3 3 LYS A 105 LEU A 109 5 5 HELIX 4 4 SER A 117 ALA A 141 1 25 HELIX 5 5 ARG A 144 GLY A 148 5 5 HELIX 6 6 GLY A 157 LEU A 170 1 14 HELIX 7 7 ARG A 180 SER A 182 5 3 HELIX 8 8 THR A 183 GLY A 191 1 9 HELIX 9 9 ASP A 199 PHE A 201 5 3 HELIX 10 10 GLY A 220 GLN A 230 1 11 HELIX 11 11 VAL A 252 ASN A 259 1 8 HELIX 12 12 PRO A 271 LEU A 286 1 16 HELIX 13 13 PRO A 287 ALA A 294 1 8 HELIX 14 14 ASP A 302 ASN A 312 1 11 HELIX 15 15 GLU B 21 LEU B 25 5 5 HELIX 16 16 ASN B 40 GLY B 49 1 10 HELIX 17 17 LYS B 105 LEU B 109 5 5 HELIX 18 18 SER B 117 ALA B 141 1 25 HELIX 19 19 ARG B 144 GLY B 148 5 5 HELIX 20 20 GLY B 157 LEU B 170 1 14 HELIX 21 21 ARG B 180 SER B 182 5 3 HELIX 22 22 THR B 183 GLY B 191 1 9 HELIX 23 23 ASP B 199 PHE B 201 5 3 HELIX 24 24 GLY B 220 GLN B 230 1 11 HELIX 25 25 VAL B 252 ASN B 259 1 8 HELIX 26 26 PRO B 271 LEU B 286 1 16 HELIX 27 27 PRO B 287 ALA B 294 1 8 HELIX 28 28 ASP B 302 ASN B 312 1 11 SHEET 1 A 2 GLN A 2 GLN A 8 0 SHEET 2 A 2 THR A 13 HIS A 19 -1 O LEU A 14 N GLU A 7 SHEET 1 B 5 ARG A 101 VAL A 104 0 SHEET 2 B 5 VAL A 30 LEU A 39 -1 N VAL A 32 O ALA A 102 SHEET 3 B 5 ASP A 64 SER A 72 -1 O HIS A 70 N THR A 31 SHEET 4 B 5 GLU A 82 THR A 86 -1 O VAL A 83 N GLY A 67 SHEET 5 B 5 VAL A 110 ALA A 111 -1 O VAL A 110 N LEU A 84 SHEET 1 C 4 ARG A 101 VAL A 104 0 SHEET 2 C 4 VAL A 30 LEU A 39 -1 N VAL A 32 O ALA A 102 SHEET 3 C 4 ARG A 318 LYS A 322 -1 O VAL A 321 N SER A 37 SHEET 4 C 4 ALA A 295 THR A 299 1 N ILE A 298 O LEU A 320 SHEET 1 D12 ARG A 194 SER A 197 0 SHEET 2 D12 VAL A 174 SER A 178 1 N ALA A 176 O ARG A 194 SHEET 3 D12 VAL A 150 VAL A 152 1 N VAL A 152 O VAL A 177 SHEET 4 D12 TRP A 212 ASP A 217 1 O ILE A 216 N VAL A 151 SHEET 5 D12 MSE A 231 ALA A 239 1 O ALA A 238 N ALA A 215 SHEET 6 D12 ARG A 261 GLY A 264 1 O ARG A 261 N VAL A 237 SHEET 7 D12 ARG B 261 GLY B 264 -1 O LEU B 262 N LEU A 262 SHEET 8 D12 MSE B 231 ALA B 239 1 N VAL B 237 O GLN B 263 SHEET 9 D12 TRP B 212 ASP B 217 1 N TRP B 212 O ASN B 232 SHEET 10 D12 VAL B 150 VAL B 152 1 N VAL B 151 O ILE B 216 SHEET 11 D12 VAL B 174 SER B 178 1 O VAL B 177 N VAL B 152 SHEET 12 D12 ARG B 194 SER B 197 1 O LEU B 196 N ALA B 176 SHEET 1 E 2 ALA A 247 THR A 251 0 SHEET 2 E 2 ALA B 247 THR B 251 -1 O THR B 250 N LEU A 248 SHEET 1 F 2 GLN B 2 GLN B 9 0 SHEET 2 F 2 LYS B 12 HIS B 19 -1 O LEU B 14 N GLU B 7 SHEET 1 G 5 ARG B 101 VAL B 104 0 SHEET 2 G 5 VAL B 30 LEU B 39 -1 N VAL B 32 O ALA B 102 SHEET 3 G 5 ASP B 64 SER B 72 -1 O HIS B 70 N THR B 31 SHEET 4 G 5 GLU B 82 THR B 86 -1 O VAL B 83 N GLY B 67 SHEET 5 G 5 VAL B 110 ALA B 111 -1 O VAL B 110 N LEU B 84 SHEET 1 H 4 ARG B 101 VAL B 104 0 SHEET 2 H 4 VAL B 30 LEU B 39 -1 N VAL B 32 O ALA B 102 SHEET 3 H 4 ARG B 318 LYS B 322 -1 O VAL B 321 N SER B 37 SHEET 4 H 4 ALA B 295 THR B 299 1 N ILE B 298 O LYS B 322 LINK C MSE A 1 N GLN A 2 1555 1555 1.33 LINK C PRO A 58 N MSE A 59 1555 1555 1.33 LINK C MSE A 59 N ILE A 60 1555 1555 1.32 LINK C ALA A 121 N MSE A 122 1555 1555 1.33 LINK C MSE A 122 N ILE A 123 1555 1555 1.33 LINK C ALA A 131 N MSE A 132 1555 1555 1.34 LINK C MSE A 132 N LEU A 133 1555 1555 1.33 LINK C VAL A 135 N MSE A 136 1555 1555 1.33 LINK C MSE A 136 N ALA A 137 1555 1555 1.33 LINK C GLN A 230 N MSE A 231 1555 1555 1.33 LINK C MSE A 231 N ASN A 232 1555 1555 1.33 LINK C VAL A 252 N MSE A 253 1555 1555 1.33 LINK C MSE A 253 N PRO A 254 1555 1555 1.35 LINK C VAL A 268 N MSE A 269 1555 1555 1.33 LINK C MSE A 269 N THR A 270 1555 1555 1.32 LINK C MSE B 1 N GLN B 2 1555 1555 1.33 LINK C PRO B 58 N MSE B 59 1555 1555 1.33 LINK C MSE B 59 N ILE B 60 1555 1555 1.33 LINK C ALA B 121 N MSE B 122 1555 1555 1.33 LINK C MSE B 122 N ILE B 123 1555 1555 1.33 LINK C ALA B 131 N MSE B 132 1555 1555 1.33 LINK C MSE B 132 N LEU B 133 1555 1555 1.33 LINK C VAL B 135 N MSE B 136 1555 1555 1.32 LINK C MSE B 136 N ALA B 137 1555 1555 1.33 LINK C GLN B 230 N MSE B 231 1555 1555 1.33 LINK C MSE B 231 N ASN B 232 1555 1555 1.33 LINK C VAL B 252 N MSE B 253 1555 1555 1.33 LINK C MSE B 253 N PRO B 254 1555 1555 1.34 LINK C VAL B 268 N MSE B 269 1555 1555 1.33 LINK C MSE B 269 N THR B 270 1555 1555 1.33 CISPEP 1 PHE A 57 PRO A 58 0 -1.57 CISPEP 2 PHE B 57 PRO B 58 0 -3.25 SITE 1 AC1 32 TYR A 41 THR A 126 THR A 130 GLY A 154 SITE 2 AC1 32 SER A 156 GLY A 157 GLY A 158 VAL A 159 SITE 3 AC1 32 SER A 178 GLY A 179 ARG A 180 ARG A 198 SITE 4 AC1 32 THR A 218 VAL A 219 CYS A 240 GLY A 241 SITE 5 AC1 32 LEU A 242 ALA A 243 GLY A 244 VAL A 265 SITE 6 AC1 32 ASP A 266 SER A 267 ASN A 313 HOH A 326 SITE 7 AC1 32 HOH A 336 HOH A 392 HOH A 418 HOH A 458 SITE 8 AC1 32 HOH A 462 HOH A 491 HOH A 503 ILE B 256 SITE 1 AC2 29 ILE A 256 TYR B 41 THR B 126 THR B 130 SITE 2 AC2 29 GLY B 154 SER B 156 GLY B 157 GLY B 158 SITE 3 AC2 29 VAL B 159 SER B 178 GLY B 179 ARG B 180 SITE 4 AC2 29 ARG B 198 THR B 218 CYS B 240 GLY B 241 SITE 5 AC2 29 LEU B 242 ALA B 243 VAL B 265 SER B 267 SITE 6 AC2 29 ILE B 310 ASN B 313 HOH B 333 HOH B 341 SITE 7 AC2 29 HOH B 343 HOH B 461 HOH B 465 HOH B 468 SITE 8 AC2 29 HOH B 474 CRYST1 103.218 122.364 64.912 90.00 121.10 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009688 0.000000 0.005844 0.00000 SCALE2 0.000000 0.008172 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017991 0.00000 HETATM 1 N MSE A 1 25.039 63.294 -14.404 1.00 60.52 N HETATM 2 CA MSE A 1 25.673 62.209 -13.648 1.00 65.27 C HETATM 3 C MSE A 1 25.642 60.867 -14.387 1.00 66.95 C HETATM 4 O MSE A 1 24.807 60.645 -15.262 1.00 74.79 O HETATM 5 CB MSE A 1 25.030 62.059 -12.265 1.00 67.39 C HETATM 6 CG MSE A 1 23.516 61.863 -12.296 1.00 75.21 C HETATM 7 SE MSE A 1 22.767 61.216 -10.607 0.75 67.23 SE HETATM 8 CE MSE A 1 23.693 59.495 -10.491 1.00 47.24 C