HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 19-JUL-10 3O0L TITLE CRYSTAL STRUCTURE OF A PFAM DUF1425 FAMILY MEMBER (SHEW_1734) FROM TITLE 2 SHEWANELLA SP. PV-4 AT 1.81 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHEWANELLA LOIHICA; SOURCE 3 ORGANISM_TAXID: 323850; SOURCE 4 STRAIN: ATCC BAA-1088 / PV-4; SOURCE 5 GENE: SHEW_1734; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS PFAM DUF1425 FAMILY MEMBER, STRUCTURAL GENOMICS, JOINT CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI- KEYWDS 3 BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 3 01-FEB-23 3O0L 1 REMARK SEQADV LINK REVDAT 2 20-JUL-11 3O0L 1 KEYWDS REVDAT 1 04-AUG-10 3O0L 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A PFAM DUF1425 FAMILY MEMBER JRNL TITL 2 (SHEW_1734) FROM SHEWANELLA SP. PV-4 AT 1.81 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.81 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0110 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.81 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 25123 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1276 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.81 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.86 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1745 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3030 REMARK 3 BIN FREE R VALUE SET COUNT : 85 REMARK 3 BIN FREE R VALUE : 0.3180 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1655 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 157 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.95000 REMARK 3 B22 (A**2) : 0.95000 REMARK 3 B33 (A**2) : -1.42000 REMARK 3 B12 (A**2) : 0.47000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.131 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.120 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.089 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.010 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1822 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1239 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2492 ; 1.608 ; 1.944 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3049 ; 0.896 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 256 ; 5.547 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 78 ;34.376 ;23.846 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 331 ;13.620 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;16.592 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 291 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2067 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 371 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1136 ; 2.123 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 468 ; 0.585 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1858 ; 3.612 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 686 ; 5.466 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 612 ; 7.853 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 20 A 128 REMARK 3 ORIGIN FOR THE GROUP (A): 26.0982 20.6495 0.1545 REMARK 3 T TENSOR REMARK 3 T11: 0.0692 T22: 0.1232 REMARK 3 T33: 0.0610 T12: 0.0495 REMARK 3 T13: 0.0332 T23: 0.0266 REMARK 3 L TENSOR REMARK 3 L11: 0.5500 L22: 0.3230 REMARK 3 L33: 3.8082 L12: 0.2692 REMARK 3 L13: -0.7316 L23: 0.3715 REMARK 3 S TENSOR REMARK 3 S11: -0.0474 S12: 0.1202 S13: -0.1213 REMARK 3 S21: -0.0353 S22: 0.0232 S23: -0.0995 REMARK 3 S31: -0.0175 S32: -0.2822 S33: 0.0242 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 22 B 129 REMARK 3 ORIGIN FOR THE GROUP (A): 36.5903 30.4381 -14.5103 REMARK 3 T TENSOR REMARK 3 T11: 0.0297 T22: 0.0933 REMARK 3 T33: 0.0630 T12: -0.0402 REMARK 3 T13: -0.0133 T23: -0.0011 REMARK 3 L TENSOR REMARK 3 L11: 3.3911 L22: 1.5337 REMARK 3 L33: 0.9557 L12: -1.1353 REMARK 3 L13: -0.1711 L23: -0.3446 REMARK 3 S TENSOR REMARK 3 S11: -0.1212 S12: 0.1136 S13: 0.2254 REMARK 3 S21: 0.1399 S22: -0.0175 S23: -0.1047 REMARK 3 S31: -0.1175 S32: 0.1505 S33: 0.1388 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 3. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. REMARK 3 5. ETHYLENE GLYCOL (EDO) MODELED IS PRESENT IN CRYSTALLIZATION/ REMARK 3 CRYO BUFFER. REMARK 4 REMARK 4 3O0L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1000060513. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.14 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837,0.97920,0.97860 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.15 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25352 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.810 REMARK 200 RESOLUTION RANGE LOW (A) : 29.760 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06500 REMARK 200 FOR THE DATA SET : 13.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.81 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.74000 REMARK 200 R SYM FOR SHELL (I) : 0.74000 REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHELXD, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4100M AMMONIUM SULFATE, 0.2000M REMARK 280 SODIUM CHLORIDE, 0.1M SODIUM ACETATE PH 4.14, NANODROP, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.68000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 79.36000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 79.36000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 39.68000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 PRO A 19 REMARK 465 ASN A 129 REMARK 465 GLY B 0 REMARK 465 PRO B 19 REMARK 465 HIS B 20 REMARK 465 THR B 21 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 20 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 98 CE NZ REMARK 470 GLU B 88 CG CD OE1 OE2 REMARK 470 GLU B 90 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 42 116.52 -162.51 REMARK 500 GLU B 53 102.98 -161.69 REMARK 500 SER B 93 -147.11 -136.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 132 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 130 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 131 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 406214 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (RESIDUES 26-335) WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 3O0L A 19 129 UNP A3QDQ3 A3QDQ3_SHELP 19 129 DBREF 3O0L B 19 129 UNP A3QDQ3 A3QDQ3_SHELP 19 129 SEQADV 3O0L GLY A 0 UNP A3QDQ3 EXPRESSION TAG SEQADV 3O0L GLY B 0 UNP A3QDQ3 EXPRESSION TAG SEQRES 1 A 112 GLY PRO HIS THR GLY GLY ILE MSE ILE SER SER THR GLY SEQRES 2 A 112 GLU VAL ARG VAL ASP ASN GLY SER PHE HIS SER ASP VAL SEQRES 3 A 112 ASP VAL SER ALA VAL THR THR GLN ALA GLU ALA GLY PHE SEQRES 4 A 112 LEU ARG ALA ARG GLY THR ILE ILE SER LYS SER PRO LYS SEQRES 5 A 112 ASP GLN ARG LEU GLN TYR LYS PHE THR TRP TYR ASP ILE SEQRES 6 A 112 ASN GLY ALA THR VAL GLU ASP GLU GLY VAL SER TRP LYS SEQRES 7 A 112 SER LEU LYS LEU HIS GLY LYS GLN GLN MSE GLN VAL THR SEQRES 8 A 112 ALA LEU SER PRO ASN ALA THR ALA VAL ARG CYS GLU LEU SEQRES 9 A 112 TYR VAL ARG GLU ALA ILE SER ASN SEQRES 1 B 112 GLY PRO HIS THR GLY GLY ILE MSE ILE SER SER THR GLY SEQRES 2 B 112 GLU VAL ARG VAL ASP ASN GLY SER PHE HIS SER ASP VAL SEQRES 3 B 112 ASP VAL SER ALA VAL THR THR GLN ALA GLU ALA GLY PHE SEQRES 4 B 112 LEU ARG ALA ARG GLY THR ILE ILE SER LYS SER PRO LYS SEQRES 5 B 112 ASP GLN ARG LEU GLN TYR LYS PHE THR TRP TYR ASP ILE SEQRES 6 B 112 ASN GLY ALA THR VAL GLU ASP GLU GLY VAL SER TRP LYS SEQRES 7 B 112 SER LEU LYS LEU HIS GLY LYS GLN GLN MSE GLN VAL THR SEQRES 8 B 112 ALA LEU SER PRO ASN ALA THR ALA VAL ARG CYS GLU LEU SEQRES 9 B 112 TYR VAL ARG GLU ALA ILE SER ASN MODRES 3O0L MSE A 25 MET SELENOMETHIONINE MODRES 3O0L MSE A 105 MET SELENOMETHIONINE MODRES 3O0L MSE B 25 MET SELENOMETHIONINE MODRES 3O0L MSE B 105 MET SELENOMETHIONINE HET MSE A 25 8 HET MSE A 105 18 HET MSE B 25 13 HET MSE B 105 13 HET EDO A 132 4 HET EDO B 130 4 HET EDO B 131 4 HETNAM MSE SELENOMETHIONINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 EDO 3(C2 H6 O2) FORMUL 6 HOH *157(H2 O) HELIX 1 1 GLU A 53 GLY A 55 5 3 SHEET 1 A 8 GLN A 104 LEU A 110 0 SHEET 2 A 8 LEU A 57 SER A 65 -1 N GLY A 61 O VAL A 107 SHEET 3 A 8 PHE A 39 GLN A 51 -1 N VAL A 48 O ARG A 60 SHEET 4 A 8 GLU A 31 ASN A 36 -1 N VAL A 32 O VAL A 43 SHEET 5 A 8 GLY A 22 SER A 27 -1 N GLY A 23 O ASP A 35 SHEET 6 A 8 ARG B 118 ILE B 127 -1 O VAL B 123 N ILE A 26 SHEET 7 A 8 GLN B 71 TYR B 80 -1 N TYR B 80 O ARG B 118 SHEET 8 A 8 THR B 86 VAL B 87 -1 O VAL B 87 N TRP B 79 SHEET 1 B 8 GLN A 104 LEU A 110 0 SHEET 2 B 8 LEU A 57 SER A 65 -1 N GLY A 61 O VAL A 107 SHEET 3 B 8 PHE A 39 GLN A 51 -1 N VAL A 48 O ARG A 60 SHEET 4 B 8 GLU A 31 ASN A 36 -1 N VAL A 32 O VAL A 43 SHEET 5 B 8 GLY A 22 SER A 27 -1 N GLY A 23 O ASP A 35 SHEET 6 B 8 ARG B 118 ILE B 127 -1 O VAL B 123 N ILE A 26 SHEET 7 B 8 GLN B 71 TYR B 80 -1 N TYR B 80 O ARG B 118 SHEET 8 B 8 LYS B 95 LEU B 99 -1 O LEU B 97 N LEU B 73 SHEET 1 C 8 LYS A 95 LEU A 99 0 SHEET 2 C 8 GLN A 71 TYR A 80 -1 N GLN A 71 O LEU A 99 SHEET 3 C 8 ARG A 118 ALA A 126 -1 O ARG A 124 N GLN A 74 SHEET 4 C 8 GLY B 23 SER B 27 -1 O ILE B 26 N VAL A 123 SHEET 5 C 8 GLU B 31 ASN B 36 -1 O ASP B 35 N GLY B 23 SHEET 6 C 8 PHE B 39 VAL B 45 -1 O PHE B 39 N ASN B 36 SHEET 7 C 8 PHE B 56 SER B 65 -1 O ILE B 64 N ASP B 44 SHEET 8 C 8 THR B 49 GLU B 53 -1 N GLN B 51 O ARG B 58 SHEET 1 D 8 LYS A 95 LEU A 99 0 SHEET 2 D 8 GLN A 71 TYR A 80 -1 N GLN A 71 O LEU A 99 SHEET 3 D 8 ARG A 118 ALA A 126 -1 O ARG A 124 N GLN A 74 SHEET 4 D 8 GLY B 23 SER B 27 -1 O ILE B 26 N VAL A 123 SHEET 5 D 8 GLU B 31 ASN B 36 -1 O ASP B 35 N GLY B 23 SHEET 6 D 8 PHE B 39 VAL B 45 -1 O PHE B 39 N ASN B 36 SHEET 7 D 8 PHE B 56 SER B 65 -1 O ILE B 64 N ASP B 44 SHEET 8 D 8 GLN B 104 LEU B 110 -1 O ALA B 109 N ALA B 59 LINK C ILE A 24 N MSE A 25 1555 1555 1.32 LINK C MSE A 25 N ILE A 26 1555 1555 1.32 LINK C GLN A 104 N MSE A 105 1555 1555 1.33 LINK C MSE A 105 N GLN A 106 1555 1555 1.32 LINK C ILE B 24 N MSE B 25 1555 1555 1.33 LINK C MSE B 25 N ILE B 26 1555 1555 1.32 LINK C GLN B 104 N MSE B 105 1555 1555 1.33 LINK C MSE B 105 N GLN B 106 1555 1555 1.33 SITE 1 AC1 1 ARG A 33 SITE 1 AC2 5 GLN B 71 ARG B 72 ASN B 83 GLU B 125 SITE 2 AC2 5 HOH B 154 SITE 1 AC3 6 PHE B 39 ASP B 81 THR B 115 SER B 128 SITE 2 AC3 6 HOH B 149 HOH B 184 CRYST1 62.633 62.633 119.040 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015966 0.009218 0.000000 0.00000 SCALE2 0.000000 0.018436 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008401 0.00000