HEADER OXIDOREDUCTASE 19-JUL-10 3O0O TITLE THERMOTOGA MARITIMA RIBONUCLEOTIDE REDUCTASE, NRDJ, IN COMPLEX WITH TITLE 2 DTTP, GDP AND ADENOSYLCOBALAMIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.17.4.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 2336; SOURCE 4 GENE: NRDJ, TM_0118; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-22B KEYWDS OXIDOREDUCTASE, 10 ALPHA/BETA BARREL, ADENOSYLCOBALAMIN DEPENDENT, KEYWDS 2 RIBONUCLEOTIDE REDUCTASE, REDUCTION RIBONUCLEOTIDE 2'-OH POSITION, KEYWDS 3 EFFECTOR, DTTP, SUBSTRATE, GDP, COENZYME B12 EXPDTA X-RAY DIFFRACTION AUTHOR K.-M.LARSSON,D.T.LOGAN,P.NORDLUND REVDAT 8 20-NOV-24 3O0O 1 REMARK REVDAT 7 06-SEP-23 3O0O 1 REMARK LINK REVDAT 6 17-JUL-19 3O0O 1 REMARK REVDAT 5 08-NOV-17 3O0O 1 REMARK REVDAT 4 24-OCT-12 3O0O 1 FORMUL REVDAT 3 27-OCT-10 3O0O 1 JRNL REVDAT 2 18-AUG-10 3O0O 1 JRNL REVDAT 1 28-JUL-10 3O0O 0 JRNL AUTH K.M.LARSSON,D.T.LOGAN,P.NORDLUND JRNL TITL STRUCTURAL BASIS FOR ADENOSYLCOBALAMIN ACTIVATION IN JRNL TITL 2 ADOCBL-DEPENDENT RIBONUCLEOTIDE REDUCTASES. JRNL REF ACS CHEM.BIOL. V. 5 933 2010 JRNL REFN ISSN 1554-8929 JRNL PMID 20672854 JRNL DOI 10.1021/CB1000845 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.2_432) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 119774 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5993 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.9516 - 4.0926 1.00 11499 643 0.1543 0.1774 REMARK 3 2 4.0926 - 3.2487 1.00 11496 564 0.1693 0.1972 REMARK 3 3 3.2487 - 2.8381 1.00 11392 619 0.1932 0.2559 REMARK 3 4 2.8381 - 2.5786 0.99 11294 639 0.2046 0.2599 REMARK 3 5 2.5786 - 2.3938 0.99 11289 624 0.2130 0.2623 REMARK 3 6 2.3938 - 2.2527 0.99 11312 582 0.2465 0.3021 REMARK 3 7 2.2527 - 2.1399 0.99 11355 591 0.2648 0.3219 REMARK 3 8 2.1399 - 2.0467 0.99 11367 567 0.3000 0.3445 REMARK 3 9 2.0467 - 1.9679 1.00 11380 581 0.3455 0.3793 REMARK 3 10 1.9679 - 1.9000 1.00 11397 583 0.4069 0.4260 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 60.18 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 10.68050 REMARK 3 B22 (A**2) : -1.95290 REMARK 3 B33 (A**2) : -8.72760 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 8.17810 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 10558 REMARK 3 ANGLE : 1.139 14368 REMARK 3 CHIRALITY : 0.073 1587 REMARK 3 PLANARITY : 0.005 1800 REMARK 3 DIHEDRAL : 16.843 4132 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:40) REMARK 3 ORIGIN FOR THE GROUP (A): -84.0271 -76.1183 11.8972 REMARK 3 T TENSOR REMARK 3 T11: 0.4917 T22: 1.0793 REMARK 3 T33: 0.3455 T12: 0.2091 REMARK 3 T13: -0.0497 T23: 0.4094 REMARK 3 L TENSOR REMARK 3 L11: 2.5649 L22: 0.6810 REMARK 3 L33: 3.1419 L12: -0.6451 REMARK 3 L13: -1.2824 L23: -0.7816 REMARK 3 S TENSOR REMARK 3 S11: -0.4106 S12: -1.2069 S13: -0.6076 REMARK 3 S21: 0.0497 S22: -0.0172 S23: 0.1596 REMARK 3 S31: -0.1028 S32: 0.7484 S33: 0.3665 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 41:511) REMARK 3 ORIGIN FOR THE GROUP (A): -86.8314 -51.7923 7.3248 REMARK 3 T TENSOR REMARK 3 T11: 0.1773 T22: 0.9434 REMARK 3 T33: 0.1704 T12: -0.2478 REMARK 3 T13: 0.0140 T23: -0.0386 REMARK 3 L TENSOR REMARK 3 L11: 2.0566 L22: 1.0382 REMARK 3 L33: 2.1377 L12: -0.4427 REMARK 3 L13: -1.2685 L23: 0.1938 REMARK 3 S TENSOR REMARK 3 S11: 0.2422 S12: -1.2367 S13: 0.0126 REMARK 3 S21: -0.1154 S22: 0.0206 S23: -0.1376 REMARK 3 S31: -0.2256 S32: 0.9222 S33: -0.2394 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 512:528) REMARK 3 ORIGIN FOR THE GROUP (A):-103.5990 -78.5863 8.7118 REMARK 3 T TENSOR REMARK 3 T11: 1.0317 T22: 0.8924 REMARK 3 T33: 1.0337 T12: 0.0271 REMARK 3 T13: 0.1025 T23: 0.0862 REMARK 3 L TENSOR REMARK 3 L11: 0.9523 L22: 1.8996 REMARK 3 L33: 0.4116 L12: -1.1000 REMARK 3 L13: -0.1323 L23: -0.2954 REMARK 3 S TENSOR REMARK 3 S11: -0.1469 S12: -0.0943 S13: -0.3964 REMARK 3 S21: -0.0756 S22: 0.0006 S23: 0.6144 REMARK 3 S31: 0.2060 S32: 0.1672 S33: 0.1789 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 529:633) REMARK 3 ORIGIN FOR THE GROUP (A):-108.8964 -59.4296 15.0264 REMARK 3 T TENSOR REMARK 3 T11: 0.1825 T22: 0.8987 REMARK 3 T33: 0.3157 T12: -0.2132 REMARK 3 T13: -0.0763 T23: 0.2602 REMARK 3 L TENSOR REMARK 3 L11: 1.9133 L22: 0.3510 REMARK 3 L33: 0.8916 L12: -0.5391 REMARK 3 L13: -0.8321 L23: 0.0240 REMARK 3 S TENSOR REMARK 3 S11: 0.1510 S12: -1.3752 S13: -0.4288 REMARK 3 S21: 0.2575 S22: 0.0273 S23: 0.1702 REMARK 3 S31: -0.1774 S32: 0.2861 S33: -0.1447 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN B AND RESID 1:66) REMARK 3 ORIGIN FOR THE GROUP (A): -80.0329 -28.9154 -47.6353 REMARK 3 T TENSOR REMARK 3 T11: 0.5211 T22: 0.1732 REMARK 3 T33: 0.3450 T12: -0.0796 REMARK 3 T13: 0.0936 T23: -0.0062 REMARK 3 L TENSOR REMARK 3 L11: 0.6956 L22: 0.6563 REMARK 3 L33: 0.3930 L12: 0.4770 REMARK 3 L13: -0.1246 L23: -0.0133 REMARK 3 S TENSOR REMARK 3 S11: 0.2028 S12: -0.0705 S13: 0.4873 REMARK 3 S21: 0.0367 S22: -0.0520 S23: 0.2430 REMARK 3 S31: -0.5805 S32: 0.0135 S33: -0.1436 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN B AND RESID 67:511) REMARK 3 ORIGIN FOR THE GROUP (A): -76.2874 -51.3269 -42.2869 REMARK 3 T TENSOR REMARK 3 T11: 0.1967 T22: 0.1422 REMARK 3 T33: 0.1834 T12: 0.0352 REMARK 3 T13: 0.0477 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 0.6677 L22: 1.7813 REMARK 3 L33: 1.7117 L12: 0.1881 REMARK 3 L13: -0.2774 L23: 0.0466 REMARK 3 S TENSOR REMARK 3 S11: -0.0572 S12: -0.0598 S13: -0.0433 REMARK 3 S21: 0.0488 S22: 0.0449 S23: -0.0045 REMARK 3 S31: 0.0935 S32: 0.2257 S33: 0.0127 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN B AND RESID 512:551) REMARK 3 ORIGIN FOR THE GROUP (A):-102.6791 -42.7854 -62.6863 REMARK 3 T TENSOR REMARK 3 T11: 0.3950 T22: 0.3214 REMARK 3 T33: 0.6820 T12: 0.0365 REMARK 3 T13: 0.0288 T23: 0.1428 REMARK 3 L TENSOR REMARK 3 L11: 1.2453 L22: 0.9260 REMARK 3 L33: 0.4609 L12: 0.8413 REMARK 3 L13: -0.2206 L23: -0.5199 REMARK 3 S TENSOR REMARK 3 S11: 0.3521 S12: 0.1109 S13: 0.6470 REMARK 3 S21: 0.2265 S22: -0.1343 S23: 0.6983 REMARK 3 S31: -0.2256 S32: -0.0642 S33: -0.2183 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 552:633) REMARK 3 ORIGIN FOR THE GROUP (A): -89.9835 -61.0482 -56.4771 REMARK 3 T TENSOR REMARK 3 T11: 0.3145 T22: 0.1397 REMARK 3 T33: 0.3099 T12: -0.0448 REMARK 3 T13: -0.0196 T23: -0.0153 REMARK 3 L TENSOR REMARK 3 L11: 0.5613 L22: 0.2241 REMARK 3 L33: 0.8711 L12: -0.2609 REMARK 3 L13: -0.1251 L23: -0.0473 REMARK 3 S TENSOR REMARK 3 S11: -0.1845 S12: 0.0861 S13: -0.2746 REMARK 3 S21: -0.2251 S22: 0.0909 S23: 0.1447 REMARK 3 S31: 0.4198 S32: 0.0172 S33: 0.0272 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3O0O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1000060516. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-MAR-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979162 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 119789 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 49.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 4.420 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.75 REMARK 200 R MERGE FOR SHELL (I) : 0.84800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: RIGID BODY REFINEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: PDB ENTRY 1XJE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG8000, 0.1M SODIUM ACETATE, 0.1 REMARK 280 M SODIUM CHLORIDE, 10MM DTT (DITHIOTREITHOL), 5% GLYCEROL, REMARK 280 CRYSTALLIZATION GEOMETRY: 4 MICROL PROTEIN 11MILIGRAM/MILLIL + REMARK 280 2UL RESERVOIR SOLUTION OVER 300 MICROL IN 24-WELL PLATE. REMARK 280 CRYSTALS IN 3-4 DAYS, PH 4.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 60.01000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 62.11500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 60.01000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 62.11500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR A 62 REMARK 465 LYS A 63 REMARK 465 LYS A 64 REMARK 465 ASN A 65 REMARK 465 GLU A 66 REMARK 465 ARG A 206 REMARK 465 GLU A 231 REMARK 465 ASN A 232 REMARK 465 THR A 233 REMARK 465 GLY A 234 REMARK 465 GLU A 235 REMARK 465 ALA A 236 REMARK 465 VAL A 516 REMARK 465 THR A 517 REMARK 465 LYS A 518 REMARK 465 GLU A 519 REMARK 465 ASP A 520 REMARK 465 GLY A 521 REMARK 465 THR A 522 REMARK 465 LYS A 523 REMARK 465 GLU A 524 REMARK 465 GLN A 634 REMARK 465 THR A 635 REMARK 465 GLN A 636 REMARK 465 VAL A 637 REMARK 465 LEU A 638 REMARK 465 THR A 639 REMARK 465 LYS A 640 REMARK 465 ALA A 641 REMARK 465 LEU A 642 REMARK 465 LYS A 643 REMARK 465 THR A 644 REMARK 465 GLU B 231 REMARK 465 ASN B 232 REMARK 465 THR B 233 REMARK 465 GLY B 234 REMARK 465 GLU B 235 REMARK 465 ALA B 236 REMARK 465 VAL B 516 REMARK 465 THR B 517 REMARK 465 LYS B 518 REMARK 465 GLU B 519 REMARK 465 ASP B 520 REMARK 465 GLY B 521 REMARK 465 THR B 522 REMARK 465 LYS B 523 REMARK 465 GLU B 524 REMARK 465 GLN B 634 REMARK 465 THR B 635 REMARK 465 GLN B 636 REMARK 465 VAL B 637 REMARK 465 LEU B 638 REMARK 465 THR B 639 REMARK 465 LYS B 640 REMARK 465 ALA B 641 REMARK 465 LEU B 642 REMARK 465 LYS B 643 REMARK 465 THR B 644 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 2 136.26 72.08 REMARK 500 ARG A 26 11.54 -149.60 REMARK 500 TRP A 107 -30.04 -130.94 REMARK 500 ASP A 111 0.56 -66.23 REMARK 500 TYR A 330 -0.53 80.49 REMARK 500 ASP A 350 88.88 -67.80 REMARK 500 MET A 460 -148.71 54.16 REMARK 500 MET A 462 27.14 -146.74 REMARK 500 THR A 491 29.05 47.97 REMARK 500 GLU A 546 -50.86 -23.69 REMARK 500 SER A 554 162.83 178.87 REMARK 500 ASN A 593 -144.93 -93.26 REMARK 500 GLU B 66 -8.65 -145.48 REMARK 500 HIS B 181 13.67 54.18 REMARK 500 SER B 205 -1.08 -142.51 REMARK 500 TYR B 330 -7.79 77.17 REMARK 500 ASN B 346 54.17 39.99 REMARK 500 MET B 460 -149.74 60.94 REMARK 500 MET B 462 38.90 -142.68 REMARK 500 ASP B 557 56.68 -109.88 REMARK 500 PHE B 569 58.67 -90.10 REMARK 500 ASN B 593 -135.96 -91.97 REMARK 500 ASN B 594 -163.40 -122.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PHE B 241 ASN B 242 149.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1002 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 649 O REMARK 620 2 HOH A 679 O 95.6 REMARK 620 3 HOH A 749 O 88.7 92.5 REMARK 620 4 TTP A1001 O2B 87.4 169.2 97.9 REMARK 620 5 TTP A1001 O1A 167.5 92.1 100.8 83.3 REMARK 620 6 TTP A1001 O2G 75.7 88.7 164.3 82.0 94.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1002 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 801 O REMARK 620 2 TTP B1001 O1A 67.9 REMARK 620 3 TTP B1001 O2B 110.5 65.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 B12 B1004 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 5AD B1005 C5' REMARK 620 2 B12 B1004 N21 94.4 REMARK 620 3 B12 B1004 N22 95.8 89.4 REMARK 620 4 B12 B1004 N23 87.8 172.3 97.7 REMARK 620 5 B12 B1004 N24 82.9 83.9 173.0 89.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TTP A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE B12 A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 5AD A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TTP B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP B 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE B12 B 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 5AD B 1005 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3O0N RELATED DB: PDB REMARK 900 RELATED ID: 3O0Q RELATED DB: PDB REMARK 900 RELATED ID: 1XJE RELATED DB: PDB REMARK 900 RELATED ID: 1XJF RELATED DB: PDB REMARK 900 RELATED ID: 1XJG RELATED DB: PDB REMARK 900 RELATED ID: 1XJJ RELATED DB: PDB REMARK 900 RELATED ID: 1XJM RELATED DB: PDB REMARK 900 RELATED ID: 1XJN RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 STUDIES SUGGEST A POINT MUTATION EITHER IN THE SEQUENCING CLONE REMARK 999 (SER->TYR MUTATION) OR IN THEIR EXPRESSION CLONE (TYR->SER). CODONS REMARK 999 FOR TYR=ATA AND SER=AGA. DBREF 3O0O A 1 644 UNP O33839 O33839_THEMA 1 644 DBREF 3O0O B 1 644 UNP O33839 O33839_THEMA 1 644 SEQADV 3O0O SER A 205 UNP O33839 TYR 205 SEE REMARK 999 SEQADV 3O0O SER B 205 UNP O33839 TYR 205 SEE REMARK 999 SEQRES 1 A 644 MET LYS LEU SER ASP LEU ILE SER ARG TRP ILE ASP VAL SEQRES 2 A 644 GLU PRO SER LYS ASN ALA GLN ILE ILE LEU ARG ASP ARG SEQRES 3 A 644 TYR PHE MET LYS ASP LEU ASP GLY ASN TYR LEU GLU THR SEQRES 4 A 644 LYS TRP GLU ASP VAL ALA ARG ARG VAL ALA ARG VAL VAL SEQRES 5 A 644 ALA THR ALA GLU LEU LEU ASN PRO SER TYR LYS LYS ASN SEQRES 6 A 644 GLU LYS LEU ASP ARG ILE LYS GLU TRP GLU ASP ILE PHE SEQRES 7 A 644 PHE ARG VAL LEU LYS ALA ARG LEU PHE ILE PRO ASN SER SEQRES 8 A 644 PRO THR LEU PHE ASN ALA GLY LEU GLY VAL LYS HIS ASP SEQRES 9 A 644 LEU LEU TRP LYS PRO ILE ASP GLN MET THR LEU GLU ASP SEQRES 10 A 644 TYR GLU GLU ILE TYR ARG SER ARG ASN HIS LEU HIS MET SEQRES 11 A 644 LEU SER ALA CYS PHE VAL VAL PRO VAL GLY ASP SER ILE SEQRES 12 A 644 GLU GLU ILE PHE GLU ALA VAL LYS GLU TYR ALA LEU ILE SEQRES 13 A 644 THR LYS VAL GLY GLY GLY VAL GLY SER ASN PHE SER GLU SEQRES 14 A 644 LEU ARG PRO LYS GLY SER PHE VAL ALA GLY THR HIS GLY SEQRES 15 A 644 LYS ALA SER GLY PRO VAL SER PHE MET HIS VAL PHE ASN SEQRES 16 A 644 SER ALA ILE SER VAL VAL LYS GLN GLY SER ARG ARG ARG SEQRES 17 A 644 GLY ALA LEU MET GLY ILE LEU ASN ILE ASN HIS PRO ASP SEQRES 18 A 644 ILE GLU GLU PHE ILE ASP ALA LYS LYS GLU ASN THR GLY SEQRES 19 A 644 GLU ALA VAL LEU ASN PHE PHE ASN LEU SER VAL GLY PHE SEQRES 20 A 644 PRO MET ASP LYS LYS GLU ILE LEU LYS LEU TYR GLU GLU SEQRES 21 A 644 ASP GLY GLU LEU GLU LEU SER HIS PRO ARG SER THR ILE SEQRES 22 A 644 ARG LYS LYS VAL LYS ILE ARG GLU LEU PHE ARG LYS ILE SEQRES 23 A 644 ALA THR ASN ALA TRP LYS SER GLY ASP PRO GLY LEU ALA SEQRES 24 A 644 PHE LEU GLY GLU MET ASN LYS TYR TYR PRO LEU TYR PRO SEQRES 25 A 644 HIS ARG LYS ILE ASN SER THR ASN PRO CYS GLY GLU ILE SEQRES 26 A 644 GLY LEU SER ASP TYR GLU ALA CYS ASN LEU GLY SER ILE SEQRES 27 A 644 ASP VAL ALA LYS PHE TYR ASN ASN GLY PHE VAL ASP LEU SEQRES 28 A 644 GLU ALA LEU GLN GLU LEU VAL GLN ILE ALA VAL ARG PHE SEQRES 29 A 644 LEU ASP ASN VAL ILE ASP VAL ASN VAL PHE PRO ILE ASP SEQRES 30 A 644 LYS ILE THR LYS ALA VAL LYS GLU SER ARG ARG LEU GLY SEQRES 31 A 644 LEU GLY ILE MET GLY PHE ALA ASP LEU LEU TYR LYS LEU SEQRES 32 A 644 GLU ILE PRO TYR ASN SER GLN GLU ALA ARG ASP PHE ALA SEQRES 33 A 644 ALA ASN LEU MET ALA PHE ILE ALA LEU HIS ALA HIS ARG SEQRES 34 A 644 THR SER TYR GLU LEU GLY LYS GLU LYS GLY ASN PHE PRO SEQRES 35 A 644 LEU LEU GLU ILE SER ARG TYR ARG THR GLU ASP ASN PHE SEQRES 36 A 644 VAL PRO PHE ALA MET GLY MET SER ASN TYR ASP ASP GLU SEQRES 37 A 644 ILE ARG GLU VAL MET LYS MET THR LYS GLU PHE ARG ARG SEQRES 38 A 644 ASN VAL ALA LEU LEU THR ILE ALA PRO THR GLY SER ILE SEQRES 39 A 644 SER ASN ILE ALA ASP THR SER SER GLY LEU GLU PRO ASN SEQRES 40 A 644 PHE LEU LEU ALA TYR THR ARG PHE VAL THR LYS GLU ASP SEQRES 41 A 644 GLY THR LYS GLU PRO LEU LEU TYR VAL ASN GLN VAL LEU SEQRES 42 A 644 ARG GLU LYS LEU ASN PRO GLU ILE LEU LYS ARG ILE GLU SEQRES 43 A 644 LYS GLU LEU ILE GLU LYS GLY SER LEU LYS ASP ILE PRO SEQRES 44 A 644 ASP VAL PRO GLU LYS ILE LYS LYS VAL PHE VAL VAL ALA SEQRES 45 A 644 LEU ASP ILE ASP PRO MET ASP HIS LEU LEU MET GLN ASP SEQRES 46 A 644 ALA PHE GLN ARG TYR VAL ASP ASN ASN ILE SER LYS THR SEQRES 47 A 644 ILE ASN MET PRO GLN SER ALA THR VAL ASP ASP VAL LEU SEQRES 48 A 644 ASN VAL TYR LEU GLU ALA LEU ARG THR ASN VAL ARG GLY SEQRES 49 A 644 ILE THR VAL TYR ARG ASP GLY SER LEU GLN THR GLN VAL SEQRES 50 A 644 LEU THR LYS ALA LEU LYS THR SEQRES 1 B 644 MET LYS LEU SER ASP LEU ILE SER ARG TRP ILE ASP VAL SEQRES 2 B 644 GLU PRO SER LYS ASN ALA GLN ILE ILE LEU ARG ASP ARG SEQRES 3 B 644 TYR PHE MET LYS ASP LEU ASP GLY ASN TYR LEU GLU THR SEQRES 4 B 644 LYS TRP GLU ASP VAL ALA ARG ARG VAL ALA ARG VAL VAL SEQRES 5 B 644 ALA THR ALA GLU LEU LEU ASN PRO SER TYR LYS LYS ASN SEQRES 6 B 644 GLU LYS LEU ASP ARG ILE LYS GLU TRP GLU ASP ILE PHE SEQRES 7 B 644 PHE ARG VAL LEU LYS ALA ARG LEU PHE ILE PRO ASN SER SEQRES 8 B 644 PRO THR LEU PHE ASN ALA GLY LEU GLY VAL LYS HIS ASP SEQRES 9 B 644 LEU LEU TRP LYS PRO ILE ASP GLN MET THR LEU GLU ASP SEQRES 10 B 644 TYR GLU GLU ILE TYR ARG SER ARG ASN HIS LEU HIS MET SEQRES 11 B 644 LEU SER ALA CYS PHE VAL VAL PRO VAL GLY ASP SER ILE SEQRES 12 B 644 GLU GLU ILE PHE GLU ALA VAL LYS GLU TYR ALA LEU ILE SEQRES 13 B 644 THR LYS VAL GLY GLY GLY VAL GLY SER ASN PHE SER GLU SEQRES 14 B 644 LEU ARG PRO LYS GLY SER PHE VAL ALA GLY THR HIS GLY SEQRES 15 B 644 LYS ALA SER GLY PRO VAL SER PHE MET HIS VAL PHE ASN SEQRES 16 B 644 SER ALA ILE SER VAL VAL LYS GLN GLY SER ARG ARG ARG SEQRES 17 B 644 GLY ALA LEU MET GLY ILE LEU ASN ILE ASN HIS PRO ASP SEQRES 18 B 644 ILE GLU GLU PHE ILE ASP ALA LYS LYS GLU ASN THR GLY SEQRES 19 B 644 GLU ALA VAL LEU ASN PHE PHE ASN LEU SER VAL GLY PHE SEQRES 20 B 644 PRO MET ASP LYS LYS GLU ILE LEU LYS LEU TYR GLU GLU SEQRES 21 B 644 ASP GLY GLU LEU GLU LEU SER HIS PRO ARG SER THR ILE SEQRES 22 B 644 ARG LYS LYS VAL LYS ILE ARG GLU LEU PHE ARG LYS ILE SEQRES 23 B 644 ALA THR ASN ALA TRP LYS SER GLY ASP PRO GLY LEU ALA SEQRES 24 B 644 PHE LEU GLY GLU MET ASN LYS TYR TYR PRO LEU TYR PRO SEQRES 25 B 644 HIS ARG LYS ILE ASN SER THR ASN PRO CYS GLY GLU ILE SEQRES 26 B 644 GLY LEU SER ASP TYR GLU ALA CYS ASN LEU GLY SER ILE SEQRES 27 B 644 ASP VAL ALA LYS PHE TYR ASN ASN GLY PHE VAL ASP LEU SEQRES 28 B 644 GLU ALA LEU GLN GLU LEU VAL GLN ILE ALA VAL ARG PHE SEQRES 29 B 644 LEU ASP ASN VAL ILE ASP VAL ASN VAL PHE PRO ILE ASP SEQRES 30 B 644 LYS ILE THR LYS ALA VAL LYS GLU SER ARG ARG LEU GLY SEQRES 31 B 644 LEU GLY ILE MET GLY PHE ALA ASP LEU LEU TYR LYS LEU SEQRES 32 B 644 GLU ILE PRO TYR ASN SER GLN GLU ALA ARG ASP PHE ALA SEQRES 33 B 644 ALA ASN LEU MET ALA PHE ILE ALA LEU HIS ALA HIS ARG SEQRES 34 B 644 THR SER TYR GLU LEU GLY LYS GLU LYS GLY ASN PHE PRO SEQRES 35 B 644 LEU LEU GLU ILE SER ARG TYR ARG THR GLU ASP ASN PHE SEQRES 36 B 644 VAL PRO PHE ALA MET GLY MET SER ASN TYR ASP ASP GLU SEQRES 37 B 644 ILE ARG GLU VAL MET LYS MET THR LYS GLU PHE ARG ARG SEQRES 38 B 644 ASN VAL ALA LEU LEU THR ILE ALA PRO THR GLY SER ILE SEQRES 39 B 644 SER ASN ILE ALA ASP THR SER SER GLY LEU GLU PRO ASN SEQRES 40 B 644 PHE LEU LEU ALA TYR THR ARG PHE VAL THR LYS GLU ASP SEQRES 41 B 644 GLY THR LYS GLU PRO LEU LEU TYR VAL ASN GLN VAL LEU SEQRES 42 B 644 ARG GLU LYS LEU ASN PRO GLU ILE LEU LYS ARG ILE GLU SEQRES 43 B 644 LYS GLU LEU ILE GLU LYS GLY SER LEU LYS ASP ILE PRO SEQRES 44 B 644 ASP VAL PRO GLU LYS ILE LYS LYS VAL PHE VAL VAL ALA SEQRES 45 B 644 LEU ASP ILE ASP PRO MET ASP HIS LEU LEU MET GLN ASP SEQRES 46 B 644 ALA PHE GLN ARG TYR VAL ASP ASN ASN ILE SER LYS THR SEQRES 47 B 644 ILE ASN MET PRO GLN SER ALA THR VAL ASP ASP VAL LEU SEQRES 48 B 644 ASN VAL TYR LEU GLU ALA LEU ARG THR ASN VAL ARG GLY SEQRES 49 B 644 ILE THR VAL TYR ARG ASP GLY SER LEU GLN THR GLN VAL SEQRES 50 B 644 LEU THR LYS ALA LEU LYS THR HET TTP A1001 29 HET MG A1002 1 HET GDP A1003 56 HET B12 A1004 91 HET 5AD A1005 18 HET TTP B1001 29 HET MG B1002 1 HET GDP B1003 56 HET B12 B1004 91 HET 5AD B1005 18 HETNAM TTP THYMIDINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM B12 COBALAMIN HETNAM 5AD 5'-DEOXYADENOSINE FORMUL 3 TTP 2(C10 H17 N2 O14 P3) FORMUL 4 MG 2(MG 2+) FORMUL 5 GDP 2(C10 H15 N5 O11 P2) FORMUL 6 B12 2(C62 H89 CO N13 O14 P 2+) FORMUL 7 5AD 2(C10 H13 N5 O3) FORMUL 13 HOH *463(H2 O) HELIX 1 1 MET A 1 ILE A 11 1 11 HELIX 2 2 SER A 16 TYR A 27 1 12 HELIX 3 3 LYS A 40 ALA A 53 1 14 HELIX 4 4 THR A 54 ASN A 59 5 6 HELIX 5 5 LYS A 67 ALA A 84 1 18 HELIX 6 6 ASN A 90 ALA A 97 1 8 HELIX 7 7 LYS A 102 TRP A 107 1 6 HELIX 8 8 PRO A 109 MET A 113 5 5 HELIX 9 9 THR A 114 SER A 124 1 11 HELIX 10 10 SER A 142 GLY A 160 1 19 HELIX 11 11 GLY A 186 VAL A 200 1 15 HELIX 12 12 ASP A 221 ASP A 227 1 7 HELIX 13 13 ASP A 250 GLU A 260 1 11 HELIX 14 14 ILE A 279 GLY A 294 1 16 HELIX 15 15 PHE A 300 TYR A 307 1 8 HELIX 16 16 ASP A 350 VAL A 371 1 22 HELIX 17 17 ILE A 376 ARG A 387 1 12 HELIX 18 18 GLY A 395 GLU A 404 1 10 HELIX 19 19 SER A 409 GLY A 439 1 31 HELIX 20 20 PHE A 441 ILE A 446 5 6 HELIX 21 21 SER A 447 GLU A 452 1 6 HELIX 22 22 TYR A 465 THR A 476 1 12 HELIX 23 23 THR A 491 ALA A 498 1 8 HELIX 24 24 ASN A 530 LEU A 537 1 8 HELIX 25 25 ASN A 538 GLY A 553 1 16 HELIX 26 26 PRO A 562 PHE A 569 1 8 HELIX 27 27 VAL A 571 ILE A 575 5 5 HELIX 28 28 ASP A 576 ARG A 589 1 14 HELIX 29 29 THR A 606 THR A 620 1 15 HELIX 30 30 LYS B 2 ILE B 11 1 10 HELIX 31 31 SER B 16 TYR B 27 1 12 HELIX 32 32 LYS B 40 THR B 54 1 15 HELIX 33 33 ALA B 55 ASN B 59 5 5 HELIX 34 34 GLU B 66 ALA B 84 1 19 HELIX 35 35 ASN B 90 ALA B 97 1 8 HELIX 36 36 LYS B 102 TRP B 107 1 6 HELIX 37 37 PRO B 109 MET B 113 5 5 HELIX 38 38 THR B 114 SER B 124 1 11 HELIX 39 39 SER B 142 GLY B 160 1 19 HELIX 40 40 SER B 185 SER B 199 1 15 HELIX 41 41 ASP B 221 ASP B 227 1 7 HELIX 42 42 ASP B 250 GLU B 260 1 11 HELIX 43 43 ILE B 279 GLY B 294 1 16 HELIX 44 44 PHE B 300 TYR B 307 1 8 HELIX 45 45 ASP B 350 ASN B 372 1 23 HELIX 46 46 ILE B 376 ARG B 387 1 12 HELIX 47 47 GLY B 395 GLU B 404 1 10 HELIX 48 48 SER B 409 GLY B 439 1 31 HELIX 49 49 LEU B 443 ILE B 446 5 4 HELIX 50 50 SER B 447 GLU B 452 1 6 HELIX 51 51 TYR B 465 THR B 476 1 12 HELIX 52 52 THR B 491 ALA B 498 1 8 HELIX 53 53 ASN B 530 LEU B 537 1 8 HELIX 54 54 ASN B 538 GLY B 553 1 16 HELIX 55 55 PRO B 562 PHE B 569 1 8 HELIX 56 56 VAL B 571 ILE B 575 5 5 HELIX 57 57 ASP B 576 ARG B 589 1 14 HELIX 58 58 THR B 606 THR B 620 1 15 SHEET 1 A 3 PHE A 87 PRO A 89 0 SHEET 2 A 3 ALA A 332 ASP A 339 -1 O SER A 337 N ILE A 88 SHEET 3 A 3 LEU A 389 MET A 394 1 O GLY A 392 N GLY A 336 SHEET 1 B 9 PHE A 87 PRO A 89 0 SHEET 2 B 9 ALA A 332 ASP A 339 -1 O SER A 337 N ILE A 88 SHEET 3 B 9 CYS A 134 VAL A 136 -1 N CYS A 134 O CYS A 333 SHEET 4 B 9 GLY A 162 ASN A 166 1 O GLY A 164 N PHE A 135 SHEET 5 B 9 LEU A 211 ASN A 216 1 O ILE A 214 N SER A 165 SHEET 6 B 9 PHE A 241 GLY A 246 1 O ASN A 242 N LEU A 211 SHEET 7 B 9 GLY A 297 ALA A 299 1 O GLY A 297 N VAL A 245 SHEET 8 B 9 GLY A 624 ARG A 629 -1 O ILE A 625 N LEU A 298 SHEET 9 B 9 THR A 598 MET A 601 1 N ILE A 599 O THR A 626 SHEET 1 C 2 PHE A 176 VAL A 177 0 SHEET 2 C 2 GLY A 182 LYS A 183 -1 O GLY A 182 N VAL A 177 SHEET 1 D 2 GLU A 263 LEU A 266 0 SHEET 2 D 2 LYS A 275 LYS A 278 -1 O LYS A 275 N LEU A 266 SHEET 1 E 2 SER A 318 THR A 319 0 SHEET 2 E 2 GLY A 326 LEU A 327 -1 O LEU A 327 N SER A 318 SHEET 1 F 2 TYR A 344 ASN A 345 0 SHEET 2 F 2 PHE A 348 VAL A 349 -1 O PHE A 348 N ASN A 345 SHEET 1 G 2 ALA A 511 ARG A 514 0 SHEET 2 G 2 LEU A 526 VAL A 529 -1 O LEU A 526 N ARG A 514 SHEET 1 H 3 PHE B 87 PRO B 89 0 SHEET 2 H 3 ALA B 332 ASP B 339 -1 O SER B 337 N ILE B 88 SHEET 3 H 3 LEU B 389 MET B 394 1 O GLY B 392 N GLY B 336 SHEET 1 I 9 PHE B 87 PRO B 89 0 SHEET 2 I 9 ALA B 332 ASP B 339 -1 O SER B 337 N ILE B 88 SHEET 3 I 9 CYS B 134 VAL B 136 -1 N CYS B 134 O CYS B 333 SHEET 4 I 9 GLY B 162 ASN B 166 1 O GLY B 164 N PHE B 135 SHEET 5 I 9 LEU B 211 ASN B 216 1 O ILE B 214 N SER B 165 SHEET 6 I 9 PHE B 241 GLY B 246 1 O ASN B 242 N LEU B 211 SHEET 7 I 9 GLY B 297 ALA B 299 1 O ALA B 299 N VAL B 245 SHEET 8 I 9 GLY B 624 ARG B 629 -1 O ILE B 625 N LEU B 298 SHEET 9 I 9 THR B 598 MET B 601 1 N ILE B 599 O THR B 626 SHEET 1 J 2 GLU B 263 LEU B 266 0 SHEET 2 J 2 LYS B 275 LYS B 278 -1 O LYS B 275 N LEU B 266 SHEET 1 K 2 SER B 318 THR B 319 0 SHEET 2 K 2 GLY B 326 LEU B 327 -1 O LEU B 327 N SER B 318 SHEET 1 L 2 TYR B 344 ASN B 345 0 SHEET 2 L 2 PHE B 348 VAL B 349 -1 O PHE B 348 N ASN B 345 SHEET 1 M 2 ALA B 511 ARG B 514 0 SHEET 2 M 2 LEU B 526 VAL B 529 -1 O TYR B 528 N TYR B 512 SSBOND 1 CYS B 134 CYS B 333 1555 1555 2.05 LINK O HOH A 649 MG MG A1002 1555 1555 2.30 LINK O HOH A 679 MG MG A1002 1555 1555 2.33 LINK O HOH A 749 MG MG A1002 1555 1555 2.26 LINK O2B TTP A1001 MG MG A1002 1555 1555 2.26 LINK O1A TTP A1001 MG MG A1002 1555 1555 2.26 LINK O2G TTP A1001 MG MG A1002 1555 1555 2.37 LINK O HOH B 801 MG MG B1002 1555 1555 2.72 LINK O1A TTP B1001 MG MG B1002 1555 1555 2.42 LINK O2B TTP B1001 MG MG B1002 1555 1555 2.56 LINK CO B12 B1004 C5' 5AD B1005 1555 1555 2.58 CISPEP 1 ASP A 295 PRO A 296 0 -2.91 CISPEP 2 TYR A 311 PRO A 312 0 -4.35 CISPEP 3 GLN B 203 GLY B 204 0 -6.70 CISPEP 4 GLY B 204 SER B 205 0 5.23 CISPEP 5 ASP B 295 PRO B 296 0 -3.30 CISPEP 6 TYR B 311 PRO B 312 0 2.48 SITE 1 AC1 23 ASP A 141 SER A 142 ILE A 143 ILE A 146 SITE 2 AC1 23 ARG A 171 VAL A 177 ALA A 178 GLY A 179 SITE 3 AC1 23 ALA A 184 SER A 185 PHE A 190 HOH A 649 SITE 4 AC1 23 HOH A 651 HOH A 676 HOH A 680 HOH A 700 SITE 5 AC1 23 HOH A 750 HOH A 755 MG A1002 LYS B 158 SITE 6 AC1 23 VAL B 200 VAL B 201 LYS B 202 SITE 1 AC2 4 HOH A 649 HOH A 679 HOH A 749 TTP A1001 SITE 1 AC3 23 ASN A 90 SER A 91 PRO A 92 PHE A 95 SITE 2 AC3 23 ALA A 133 CYS A 134 GLY A 161 GLY A 162 SITE 3 AC3 23 ARG A 207 ARG A 208 ASN A 320 PRO A 321 SITE 4 AC3 23 CYS A 322 GLU A 324 ALA A 489 PRO A 490 SITE 5 AC3 23 THR A 491 GLY A 492 SER A 493 ILE A 494 SITE 6 AC3 23 HOH A 703 HOH A 719 B12 A1004 SITE 1 AC4 17 ARG A 208 GLY A 294 CYS A 322 GLY A 492 SITE 2 AC4 17 ASN A 496 PHE A 508 THR A 598 ASN A 600 SITE 3 AC4 17 THR A 626 TYR A 628 ASP A 630 HOH A 693 SITE 4 AC4 17 HOH A 726 HOH A 780 HOH A 782 GDP A1003 SITE 5 AC4 17 5AD A1005 SITE 1 AC5 11 ASN A 242 LEU A 243 SER A 244 ASP A 295 SITE 2 AC5 11 CYS A 322 SER A 596 THR A 598 THR A 626 SITE 3 AC5 11 HOH A 707 HOH A 785 B12 A1004 SITE 1 AC6 16 LYS A 158 VAL A 200 LYS A 202 ASP B 141 SITE 2 AC6 16 SER B 142 ILE B 143 ARG B 171 VAL B 177 SITE 3 AC6 16 ALA B 178 GLY B 179 ALA B 184 SER B 185 SITE 4 AC6 16 PHE B 190 HOH B 700 HOH B 801 MG B1002 SITE 1 AC7 3 SER B 142 HOH B 801 TTP B1001 SITE 1 AC8 25 ASN B 90 SER B 91 PHE B 95 ALA B 133 SITE 2 AC8 25 CYS B 134 GLY B 161 ARG B 206 ARG B 208 SITE 3 AC8 25 ALA B 210 ASN B 320 PRO B 321 CYS B 322 SITE 4 AC8 25 GLU B 324 ALA B 489 PRO B 490 THR B 491 SITE 5 AC8 25 GLY B 492 SER B 493 ILE B 494 HOH B 645 SITE 6 AC8 25 HOH B 689 HOH B 785 HOH B 947 HOH B 948 SITE 7 AC8 25 B12 B1004 SITE 1 AC9 23 ARG B 26 ARG B 206 ARG B 208 ASN B 242 SITE 2 AC9 23 GLY B 294 ASP B 295 CYS B 322 GLY B 492 SITE 3 AC9 23 ASN B 496 PHE B 508 ASN B 600 TYR B 628 SITE 4 AC9 23 HOH B 705 HOH B 714 HOH B 726 HOH B 736 SITE 5 AC9 23 HOH B 812 HOH B 879 HOH B 947 HOH B 950 SITE 6 AC9 23 HOH B 955 GDP B1003 5AD B1005 SITE 1 BC1 13 MET B 212 ASN B 242 LEU B 243 SER B 244 SITE 2 BC1 13 CYS B 322 GLY B 323 SER B 596 THR B 626 SITE 3 BC1 13 HOH B 682 HOH B 758 HOH B 798 HOH B 880 SITE 4 BC1 13 B12 B1004 CRYST1 120.020 124.230 107.170 90.00 102.57 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008332 0.000000 0.001857 0.00000 SCALE2 0.000000 0.008050 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009560 0.00000