HEADER TRANSFERASE/INHIBITOR 22-JUL-10 3O2M
TITLE CRYSTAL STRUCTURE OF JNK1-ALPHA1 ISOFORM COMPLEX WITH A BIARYL
TITLE 2 TETRAZOL (A-82118)
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE 8;
COMPND 3 CHAIN: A, B;
COMPND 4 FRAGMENT: UNP RESIDUES 1-364;
COMPND 5 SYNONYM: MAP KINASE 8, MAPK 8, STRESS-ACTIVATED PROTEIN KINASE JNK1,
COMPND 6 C-JUN N-TERMINAL KINASE 1, JNK-46, STRESS-ACTIVATED PROTEIN KINASE 1;
COMPND 7 EC: 2.7.11.24;
COMPND 8 ENGINEERED: YES;
COMPND 9 MUTATION: YES;
COMPND 10 MOL_ID: 2;
COMPND 11 MOLECULE: C-JUN-AMINO-TERMINAL KINASE-INTERACTING PROTEIN 1, JIP1,
COMPND 12 10MER PEPTIDE;
COMPND 13 CHAIN: F, G;
COMPND 14 SYNONYM: JNK-INTERACTING PROTEIN 1, JIP-1, JNK MAP KINASE SCAFFOLD
COMPND 15 PROTEIN 1;
COMPND 16 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: JNK1, MAPK8, PRKM8, SAPK1;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 8 MOL_ID: 2;
SOURCE 9 SYNTHETIC: YES;
SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS;
SOURCE 11 ORGANISM_COMMON: MOUSE;
SOURCE 12 ORGANISM_TAXID: 10090
KEYWDS SERINE THREONINE PROTEIN KINASE, ATP BINDING, PHOSPHORYLATION,
KEYWDS 2 KINASE-INHIBITOR COMPLEX, TRANSFERASE-INHIBITOR COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR C.ABAD-ZAPATERO
REVDAT 4 21-FEB-24 3O2M 1 REMARK SEQADV
REVDAT 3 14-SEP-11 3O2M 1 JRNL VERSN
REVDAT 2 23-FEB-11 3O2M 1 JRNL
REVDAT 1 12-JAN-11 3O2M 0
JRNL AUTH K.M.COMESS,C.SUN,C.ABAD-ZAPATERO,E.R.GOEDKEN,R.J.GUM,
JRNL AUTH 2 D.W.BORHANI,M.ARGIRIADI,D.R.GROEBE,Y.JIA,J.E.CLAMPIT,
JRNL AUTH 3 D.L.HAASCH,H.T.SMITH,S.WANG,D.SONG,M.L.COEN,T.E.CLOUTIER,
JRNL AUTH 4 H.TANG,X.CHENG,C.QUINN,B.LIU,Z.XIN,G.LIU,E.H.FRY,V.STOLL,
JRNL AUTH 5 T.I.NG,D.BANACH,D.MARCOTTE,D.J.BURNS,D.J.CALDERWOOD,
JRNL AUTH 6 P.J.HAJDUK
JRNL TITL DISCOVERY AND CHARACTERIZATION OF NON-ATP SITE INHIBITORS OF
JRNL TITL 2 THE MITOGEN ACTIVATED PROTEIN (MAP) KINASES.
JRNL REF ACS CHEM.BIOL. V. 6 234 2011
JRNL REFN ISSN 1554-8929
JRNL PMID 21090814
JRNL DOI 10.1021/CB1002619
REMARK 2
REMARK 2 RESOLUTION. 2.70 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : CNS 1.2
REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-
REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,
REMARK 3 : READ,RICE,SIMONSON,WARREN
REMARK 3
REMARK 3 REFINEMENT TARGET : NULL
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.88
REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000
REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 389580.090
REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000
REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 88.5
REMARK 3 NUMBER OF REFLECTIONS : 43787
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING SET) : 0.233
REMARK 3 FREE R VALUE : 0.266
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000
REMARK 3 FREE R VALUE TEST SET COUNT : 4384
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 6
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 69.00
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5078
REMARK 3 BIN R VALUE (WORKING SET) : 0.3170
REMARK 3 BIN FREE R VALUE : 0.3630
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.70
REMARK 3 BIN FREE R VALUE TEST SET COUNT : 545
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.016
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 5955
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 82
REMARK 3 SOLVENT ATOMS : 0
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 49.70
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.00
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 0.00000
REMARK 3 B22 (A**2) : 0.00000
REMARK 3 B33 (A**2) : 0.00000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.39
REMARK 3 ESD FROM SIGMAA (A) : 0.37
REMARK 3 LOW RESOLUTION CUTOFF (A) : 20.0
REMARK 3
REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.46
REMARK 3 ESD FROM C-V SIGMAA (A) : 0.42
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.013
REMARK 3 BOND ANGLES (DEGREES) : 1.600
REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.50
REMARK 3 IMPROPER ANGLES (DEGREES) : 1.020
REMARK 3
REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA
REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL
REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL
REMARK 3
REMARK 3 BULK SOLVENT MODELING.
REMARK 3 METHOD USED : FLAT MODEL
REMARK 3 KSOL : 0.35
REMARK 3 BSOL : 39.56
REMARK 3
REMARK 3 NCS MODEL : NULL
REMARK 3
REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT
REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL
REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL
REMARK 3
REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM
REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM
REMARK 3 PARAMETER FILE 3 : ION.PARAM
REMARK 3 PARAMETER FILE 4 : SO4.PAR
REMARK 3 PARAMETER FILE 5 : LIG.PAR
REMARK 3 PARAMETER FILE 6 : NULL
REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP
REMARK 3 TOPOLOGY FILE 2 : SO4.TOP
REMARK 3 TOPOLOGY FILE 3 : LIG.TOP
REMARK 3 TOPOLOGY FILE 4 : NULL
REMARK 3 TOPOLOGY FILE 5 : NULL
REMARK 3 TOPOLOGY FILE 6 : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED
REMARK 4
REMARK 4 3O2M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-JUL-10.
REMARK 100 THE DEPOSITION ID IS D_1000060586.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 04-NOV-04
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 6.2
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : APS
REMARK 200 BEAMLINE : 17-ID
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.0
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000
REMARK 200 DATA SCALING SOFTWARE : HKL-2000
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46583
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 94.2
REMARK 200 DATA REDUNDANCY : NULL
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: MOLREP
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 76.71
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.28
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: HANGING DROP : 2 UL OF 10 MG/ML
REMARK 280 PROTEIN PLUS 2 UL OF WELL SOLUTION WELL SOLUTION : 3.0 M
REMARK 280 AMMONIUM SULFATE, 10 % GLYCEROL CO-CRYSTALLIZATION : COMPOUNDS
REMARK 280 IN DMSO ADDED TO THE PROTEIN SOLUTION (0.62 MM COMPOUND WITH
REMARK 280 PROTEIN CONCENTRATION OF 9 MG/ML) MORE THAN 1 HOUR INCUBATION ON
REMARK 280 ICE, PH 6.2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z+2/3
REMARK 290 3555 -X+Y,-X,Z+1/3
REMARK 290 4555 Y,X,-Z
REMARK 290 5555 X-Y,-Y,-Z+1/3
REMARK 290 6555 -X,-X+Y,-Z+2/3
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.63933
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 41.31967
REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 41.31967
REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 82.63933
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2, 3
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 300 REMARK: TWO UNDECAPEPTIDES IN ONE ASYMMETRIC UNIT
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 1640 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 16980 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, F
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 1640 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 17000 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, G
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 3
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 5150 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 32110 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -101.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, F, B, G
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A 1
REMARK 465 SER A 2
REMARK 465 ARG A 3
REMARK 465 SER A 4
REMARK 465 LYS A 5
REMARK 465 ARG A 6
REMARK 465 HIS A 365
REMARK 465 HIS A 366
REMARK 465 HIS A 367
REMARK 465 HIS A 368
REMARK 465 HIS A 369
REMARK 465 HIS A 370
REMARK 465 MET B 1
REMARK 465 SER B 2
REMARK 465 ARG B 3
REMARK 465 SER B 4
REMARK 465 LYS B 5
REMARK 465 ARG B 6
REMARK 465 HIS B 365
REMARK 465 HIS B 366
REMARK 465 HIS B 367
REMARK 465 HIS B 368
REMARK 465 HIS B 369
REMARK 465 HIS B 370
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 LEU B 168 CA - CB - CG ANGL. DEV. = 15.1 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ASN A 8 -116.77 -90.36
REMARK 500 ASN A 28 -37.28 83.88
REMARK 500 LEU A 29 -110.46 50.25
REMARK 500 LYS A 30 123.70 72.11
REMARK 500 ILE A 32 -18.88 -141.04
REMARK 500 GLU A 49 63.44 60.16
REMARK 500 ARG A 50 147.31 -173.77
REMARK 500 ARG A 59 83.95 65.98
REMARK 500 ASN A 63 154.35 175.36
REMARK 500 PHE A 101 119.22 -39.39
REMARK 500 GLN A 102 -33.77 -140.36
REMARK 500 MET A 111 -159.72 -95.48
REMARK 500 ARG A 150 -13.97 72.90
REMARK 500 ASP A 169 93.80 80.49
REMARK 500 ALA A 176 170.90 -52.97
REMARK 500 GLU A 183 61.14 39.00
REMARK 500 HIS A 221 -2.03 75.51
REMARK 500 PRO A 226 -124.08 -56.88
REMARK 500 SER A 284 -158.80 -117.07
REMARK 500 LYS A 288 -72.28 -88.02
REMARK 500 LEU A 289 72.67 -69.03
REMARK 500 ASP A 339 -11.96 133.01
REMARK 500 GLU A 344 23.21 -74.14
REMARK 500 LYS A 358 -77.44 -52.69
REMARK 500 GLU A 359 -62.89 -27.91
REMARK 500 MET A 361 -73.62 -54.01
REMARK 500 ASP A 362 27.08 -64.70
REMARK 500 ASN B 8 -133.82 -107.83
REMARK 500 ASN B 28 -54.62 81.91
REMARK 500 LEU B 29 -80.41 60.26
REMARK 500 LYS B 30 105.51 42.62
REMARK 500 ILE B 47 -74.24 -66.20
REMARK 500 LEU B 89 -60.34 -100.14
REMARK 500 PHE B 101 132.99 -37.28
REMARK 500 GLN B 102 -32.86 -156.30
REMARK 500 SER B 144 1.30 -65.08
REMARK 500 ARG B 150 -6.68 66.21
REMARK 500 ASP B 169 93.12 61.31
REMARK 500 GLU B 183 55.60 36.50
REMARK 500 PRO B 184 -19.34 -49.95
REMARK 500 PRO B 226 -108.20 -57.87
REMARK 500 SER B 284 -111.38 -84.14
REMARK 500 GLU B 285 87.62 -173.37
REMARK 500 HIS B 286 67.06 -156.61
REMARK 500 ASN B 287 -75.87 11.03
REMARK 500 LYS B 288 -83.69 -25.13
REMARK 500 ASN B 322 -37.60 -39.99
REMARK 500 PRO B 327 -36.00 -33.63
REMARK 500 GLU B 331 76.19 -178.43
REMARK 500 PRO B 338 -72.90 -38.47
REMARK 500
REMARK 500 THIS ENTRY HAS 57 RAMACHANDRAN OUTLIERS.
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 46A A 701
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 46A B 701
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 801
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 802
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 801
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 802
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 3O17 RELATED DB: PDB
REMARK 900 APO JNK1-ALPHA1 ISOFORM
REMARK 999
REMARK 999 SEQUENCE
REMARK 999 AUTHORS SEQUENCE MATCHES WITH SEQUENCE PUBLISHED BY HEO ET AL.
REMARK 999 (2004) EMBO JOURNAL VOL. 23, 2185-2195 AND SUPPLEMENTAL INFORMATION
DBREF 3O2M A 1 364 UNP P45983 MK08_HUMAN 1 364
DBREF 3O2M F 554 563 UNP Q9WVI9 JIP1_MOUSE 154 163
DBREF 3O2M B 1 364 UNP P45983 MK08_HUMAN 1 364
DBREF 3O2M G 554 563 UNP Q9WVI9 JIP1_MOUSE 154 163
SEQADV 3O2M GLU A 183 UNP P45983 THR 183 ENGINEERED MUTATION
SEQADV 3O2M GLU A 185 UNP P45983 TYR 185 ENGINEERED MUTATION
SEQADV 3O2M ILE A 208 UNP P45983 LEU 208 VARIANT
SEQADV 3O2M ALA A 247 UNP P45983 GLU 247 SEE REMARK 999
SEQADV 3O2M ASN A 258 UNP P45983 THR 258 SEE REMARK 999
SEQADV 3O2M HIS A 365 UNP P45983 EXPRESSION TAG
SEQADV 3O2M HIS A 366 UNP P45983 EXPRESSION TAG
SEQADV 3O2M HIS A 367 UNP P45983 EXPRESSION TAG
SEQADV 3O2M HIS A 368 UNP P45983 EXPRESSION TAG
SEQADV 3O2M HIS A 369 UNP P45983 EXPRESSION TAG
SEQADV 3O2M HIS A 370 UNP P45983 EXPRESSION TAG
SEQADV 3O2M GLU B 183 UNP P45983 THR 183 ENGINEERED MUTATION
SEQADV 3O2M GLU B 185 UNP P45983 TYR 185 ENGINEERED MUTATION
SEQADV 3O2M ILE B 208 UNP P45983 LEU 208 VARIANT
SEQADV 3O2M ALA B 247 UNP P45983 GLU 247 SEE REMARK 999
SEQADV 3O2M ASN B 258 UNP P45983 THR 258 SEE REMARK 999
SEQADV 3O2M HIS B 365 UNP P45983 EXPRESSION TAG
SEQADV 3O2M HIS B 366 UNP P45983 EXPRESSION TAG
SEQADV 3O2M HIS B 367 UNP P45983 EXPRESSION TAG
SEQADV 3O2M HIS B 368 UNP P45983 EXPRESSION TAG
SEQADV 3O2M HIS B 369 UNP P45983 EXPRESSION TAG
SEQADV 3O2M HIS B 370 UNP P45983 EXPRESSION TAG
SEQRES 1 A 370 MET SER ARG SER LYS ARG ASP ASN ASN PHE TYR SER VAL
SEQRES 2 A 370 GLU ILE GLY ASP SER THR PHE THR VAL LEU LYS ARG TYR
SEQRES 3 A 370 GLN ASN LEU LYS PRO ILE GLY SER GLY ALA GLN GLY ILE
SEQRES 4 A 370 VAL CYS ALA ALA TYR ASP ALA ILE LEU GLU ARG ASN VAL
SEQRES 5 A 370 ALA ILE LYS LYS LEU SER ARG PRO PHE GLN ASN GLN THR
SEQRES 6 A 370 HIS ALA LYS ARG ALA TYR ARG GLU LEU VAL LEU MET LYS
SEQRES 7 A 370 CYS VAL ASN HIS LYS ASN ILE ILE GLY LEU LEU ASN VAL
SEQRES 8 A 370 PHE THR PRO GLN LYS SER LEU GLU GLU PHE GLN ASP VAL
SEQRES 9 A 370 TYR ILE VAL MET GLU LEU MET ASP ALA ASN LEU CYS GLN
SEQRES 10 A 370 VAL ILE GLN MET GLU LEU ASP HIS GLU ARG MET SER TYR
SEQRES 11 A 370 LEU LEU TYR GLN MET LEU CYS GLY ILE LYS HIS LEU HIS
SEQRES 12 A 370 SER ALA GLY ILE ILE HIS ARG ASP LEU LYS PRO SER ASN
SEQRES 13 A 370 ILE VAL VAL LYS SER ASP CYS THR LEU LYS ILE LEU ASP
SEQRES 14 A 370 PHE GLY LEU ALA ARG THR ALA GLY THR SER PHE MET MET
SEQRES 15 A 370 GLU PRO GLU VAL VAL THR ARG TYR TYR ARG ALA PRO GLU
SEQRES 16 A 370 VAL ILE LEU GLY MET GLY TYR LYS GLU ASN VAL ASP ILE
SEQRES 17 A 370 TRP SER VAL GLY CYS ILE MET GLY GLU MET VAL CYS HIS
SEQRES 18 A 370 LYS ILE LEU PHE PRO GLY ARG ASP TYR ILE ASP GLN TRP
SEQRES 19 A 370 ASN LYS VAL ILE GLU GLN LEU GLY THR PRO CYS PRO ALA
SEQRES 20 A 370 PHE MET LYS LYS LEU GLN PRO THR VAL ARG ASN TYR VAL
SEQRES 21 A 370 GLU ASN ARG PRO LYS TYR ALA GLY TYR SER PHE GLU LYS
SEQRES 22 A 370 LEU PHE PRO ASP VAL LEU PHE PRO ALA ASP SER GLU HIS
SEQRES 23 A 370 ASN LYS LEU LYS ALA SER GLN ALA ARG ASP LEU LEU SER
SEQRES 24 A 370 LYS MET LEU VAL ILE ASP ALA SER LYS ARG ILE SER VAL
SEQRES 25 A 370 ASP GLU ALA LEU GLN HIS PRO TYR ILE ASN VAL TRP TYR
SEQRES 26 A 370 ASP PRO SER GLU ALA GLU ALA PRO PRO PRO LYS ILE PRO
SEQRES 27 A 370 ASP LYS GLN LEU ASP GLU ARG GLU HIS THR ILE GLU GLU
SEQRES 28 A 370 TRP LYS GLU LEU ILE TYR LYS GLU VAL MET ASP LEU GLU
SEQRES 29 A 370 HIS HIS HIS HIS HIS HIS
SEQRES 1 F 10 PRO LYS ARG PRO THR THR LEU ASN LEU PHE
SEQRES 1 B 370 MET SER ARG SER LYS ARG ASP ASN ASN PHE TYR SER VAL
SEQRES 2 B 370 GLU ILE GLY ASP SER THR PHE THR VAL LEU LYS ARG TYR
SEQRES 3 B 370 GLN ASN LEU LYS PRO ILE GLY SER GLY ALA GLN GLY ILE
SEQRES 4 B 370 VAL CYS ALA ALA TYR ASP ALA ILE LEU GLU ARG ASN VAL
SEQRES 5 B 370 ALA ILE LYS LYS LEU SER ARG PRO PHE GLN ASN GLN THR
SEQRES 6 B 370 HIS ALA LYS ARG ALA TYR ARG GLU LEU VAL LEU MET LYS
SEQRES 7 B 370 CYS VAL ASN HIS LYS ASN ILE ILE GLY LEU LEU ASN VAL
SEQRES 8 B 370 PHE THR PRO GLN LYS SER LEU GLU GLU PHE GLN ASP VAL
SEQRES 9 B 370 TYR ILE VAL MET GLU LEU MET ASP ALA ASN LEU CYS GLN
SEQRES 10 B 370 VAL ILE GLN MET GLU LEU ASP HIS GLU ARG MET SER TYR
SEQRES 11 B 370 LEU LEU TYR GLN MET LEU CYS GLY ILE LYS HIS LEU HIS
SEQRES 12 B 370 SER ALA GLY ILE ILE HIS ARG ASP LEU LYS PRO SER ASN
SEQRES 13 B 370 ILE VAL VAL LYS SER ASP CYS THR LEU LYS ILE LEU ASP
SEQRES 14 B 370 PHE GLY LEU ALA ARG THR ALA GLY THR SER PHE MET MET
SEQRES 15 B 370 GLU PRO GLU VAL VAL THR ARG TYR TYR ARG ALA PRO GLU
SEQRES 16 B 370 VAL ILE LEU GLY MET GLY TYR LYS GLU ASN VAL ASP ILE
SEQRES 17 B 370 TRP SER VAL GLY CYS ILE MET GLY GLU MET VAL CYS HIS
SEQRES 18 B 370 LYS ILE LEU PHE PRO GLY ARG ASP TYR ILE ASP GLN TRP
SEQRES 19 B 370 ASN LYS VAL ILE GLU GLN LEU GLY THR PRO CYS PRO ALA
SEQRES 20 B 370 PHE MET LYS LYS LEU GLN PRO THR VAL ARG ASN TYR VAL
SEQRES 21 B 370 GLU ASN ARG PRO LYS TYR ALA GLY TYR SER PHE GLU LYS
SEQRES 22 B 370 LEU PHE PRO ASP VAL LEU PHE PRO ALA ASP SER GLU HIS
SEQRES 23 B 370 ASN LYS LEU LYS ALA SER GLN ALA ARG ASP LEU LEU SER
SEQRES 24 B 370 LYS MET LEU VAL ILE ASP ALA SER LYS ARG ILE SER VAL
SEQRES 25 B 370 ASP GLU ALA LEU GLN HIS PRO TYR ILE ASN VAL TRP TYR
SEQRES 26 B 370 ASP PRO SER GLU ALA GLU ALA PRO PRO PRO LYS ILE PRO
SEQRES 27 B 370 ASP LYS GLN LEU ASP GLU ARG GLU HIS THR ILE GLU GLU
SEQRES 28 B 370 TRP LYS GLU LEU ILE TYR LYS GLU VAL MET ASP LEU GLU
SEQRES 29 B 370 HIS HIS HIS HIS HIS HIS
SEQRES 1 G 10 PRO LYS ARG PRO THR THR LEU ASN LEU PHE
HET 46A A 701 31
HET SO4 A 801 5
HET SO4 A 802 5
HET 46A B 701 31
HET SO4 B 801 5
HET SO4 B 802 5
HETNAM 46A N-BUTYL-4,6-DIMETHYL-N-{[2'-(2H-TETRAZOL-5-YL)BIPHENYL-
HETNAM 2 46A 4-YL]METHYL}PYRIMIDIN-2-AMINE
HETNAM SO4 SULFATE ION
FORMUL 5 46A 2(C24 H27 N7)
FORMUL 6 SO4 4(O4 S 2-)
HELIX 1 1 ASN A 63 VAL A 80 1 18
HELIX 2 2 LEU A 115 ILE A 119 1 5
HELIX 3 3 ASP A 124 SER A 144 1 21
HELIX 4 4 GLU A 183 VAL A 187 5 5
HELIX 5 5 THR A 188 ARG A 192 5 5
HELIX 6 6 ALA A 193 LEU A 198 1 6
HELIX 7 7 ASN A 205 HIS A 221 1 17
HELIX 8 8 ILE A 231 GLY A 242 1 12
HELIX 9 9 CYS A 245 LYS A 250 1 6
HELIX 10 10 GLN A 253 ASN A 262 1 10
HELIX 11 11 SER A 270 PHE A 275 1 6
HELIX 12 12 PRO A 276 PHE A 280 5 5
HELIX 13 13 LYS A 290 LEU A 302 1 13
HELIX 14 14 SER A 311 HIS A 318 1 8
HELIX 15 15 HIS A 318 VAL A 323 1 6
HELIX 16 16 ASP A 326 GLU A 331 1 6
HELIX 17 17 THR A 348 ASP A 362 1 15
HELIX 18 18 ASN B 63 VAL B 80 1 18
HELIX 19 19 LEU B 115 GLN B 120 1 6
HELIX 20 20 ASP B 124 SER B 144 1 21
HELIX 21 21 LYS B 153 SER B 155 5 3
HELIX 22 22 GLU B 183 VAL B 187 5 5
HELIX 23 23 THR B 188 ARG B 192 5 5
HELIX 24 24 ALA B 193 LEU B 198 1 6
HELIX 25 25 ASN B 205 HIS B 221 1 17
HELIX 26 26 ILE B 231 GLY B 242 1 12
HELIX 27 27 CYS B 245 LYS B 250 1 6
HELIX 28 28 GLN B 253 ASN B 262 1 10
HELIX 29 29 SER B 270 PHE B 275 1 6
HELIX 30 30 PRO B 276 PHE B 280 5 5
HELIX 31 31 LYS B 290 LEU B 302 1 13
HELIX 32 32 ASP B 305 ARG B 309 5 5
HELIX 33 33 SER B 311 GLN B 317 1 7
HELIX 34 34 HIS B 318 VAL B 323 1 6
HELIX 35 35 ASP B 326 GLU B 331 1 6
HELIX 36 36 ASP B 339 GLU B 344 5 6
HELIX 37 37 THR B 348 ASP B 362 1 15
SHEET 1 A 2 PHE A 10 ILE A 15 0
SHEET 2 A 2 SER A 18 LEU A 23 -1 O SER A 18 N ILE A 15
SHEET 1 B 3 TYR A 26 GLN A 27 0
SHEET 2 B 3 GLY A 38 ASP A 45 -1 O TYR A 44 N GLN A 27
SHEET 3 B 3 PRO A 31 GLY A 35 -1 N GLY A 33 O VAL A 40
SHEET 1 C 5 TYR A 26 GLN A 27 0
SHEET 2 C 5 GLY A 38 ASP A 45 -1 O TYR A 44 N GLN A 27
SHEET 3 C 5 ARG A 50 LYS A 56 -1 O ILE A 54 N CYS A 41
SHEET 4 C 5 TYR A 105 GLU A 109 -1 O ILE A 106 N LYS A 55
SHEET 5 C 5 LEU A 88 PHE A 92 -1 N ASN A 90 O VAL A 107
SHEET 1 D 3 ALA A 113 ASN A 114 0
SHEET 2 D 3 ILE A 157 VAL A 159 -1 O VAL A 159 N ALA A 113
SHEET 3 D 3 LEU A 165 ILE A 167 -1 O LYS A 166 N VAL A 158
SHEET 1 E 2 ILE A 147 ILE A 148 0
SHEET 2 E 2 ARG A 174 THR A 175 -1 O ARG A 174 N ILE A 148
SHEET 1 F 2 PHE B 10 ILE B 15 0
SHEET 2 F 2 SER B 18 LEU B 23 -1 O VAL B 22 N TYR B 11
SHEET 1 G 3 TYR B 26 GLN B 27 0
SHEET 2 G 3 GLY B 38 ASP B 45 -1 O TYR B 44 N GLN B 27
SHEET 3 G 3 PRO B 31 GLY B 35 -1 N GLY B 33 O VAL B 40
SHEET 1 H 5 TYR B 26 GLN B 27 0
SHEET 2 H 5 GLY B 38 ASP B 45 -1 O TYR B 44 N GLN B 27
SHEET 3 H 5 ARG B 50 LYS B 56 -1 O VAL B 52 N ALA B 43
SHEET 4 H 5 TYR B 105 GLU B 109 -1 O MET B 108 N ALA B 53
SHEET 5 H 5 LEU B 88 PHE B 92 -1 N ASN B 90 O VAL B 107
SHEET 1 I 3 ALA B 113 ASN B 114 0
SHEET 2 I 3 ILE B 157 VAL B 159 -1 O VAL B 159 N ALA B 113
SHEET 3 I 3 LEU B 165 ILE B 167 -1 O LYS B 166 N VAL B 158
SITE 1 AC1 12 PHE A 180 ILE A 197 LEU A 198 GLY A 199
SITE 2 AC1 12 TYR A 230 ILE A 231 GLN A 253 THR A 255
SITE 3 AC1 12 VAL A 256 PRO B 184 THR B 255 46A B 701
SITE 1 AC2 11 PRO A 184 VAL A 256 46A A 701 PHE B 180
SITE 2 AC2 11 ILE B 197 GLY B 199 TYR B 230 ILE B 231
SITE 3 AC2 11 GLN B 253 THR B 255 VAL B 256
SITE 1 AC3 5 ARG A 189 ARG A 192 TYR A 230 THR B 255
SITE 2 AC3 5 ASN B 258
SITE 1 AC4 5 LYS A 68 ARG A 69 ARG A 72 ARG A 150
SITE 2 AC4 5 MET A 181
SITE 1 AC5 4 THR A 255 ARG B 189 ARG B 192 TYR B 230
SITE 1 AC6 6 LYS B 68 ARG B 69 ARG B 72 ARG B 150
SITE 2 AC6 6 ARG B 174 MET B 181
CRYST1 158.379 158.379 123.959 90.00 90.00 120.00 P 32 2 1 12
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.006314 0.003645 0.000000 0.00000
SCALE2 0.000000 0.007291 0.000000 0.00000
SCALE3 0.000000 0.000000 0.008067 0.00000