data_3O6D # _entry.id 3O6D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3O6D RCSB RCSB060721 WWPDB D_1000060721 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3O6C 'Pyridoxal phosphate biosynthetic protein PdxJ from Campylobacter jejuni.' unspecified TargetDB IDP90671 . unspecified # _pdbx_database_status.entry_id 3O6D _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-07-28 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Osipiuk, J.' 1 'Zhou, M.' 2 'Kwon, K.' 3 'Anderson, W.F.' 4 'Joachimiak, A.' 5 'Center for Structural Genomics of Infectious Diseases (CSGID)' 6 # _citation.id primary _citation.title 'X-ray crystal structure of pyridoxal phosphate biosynthetic protein PdxJ from Campylobacter jejuni.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Osipiuk, J.' 1 primary 'Zhou, M.' 2 primary 'Kwon, K.' 3 primary 'Anderson, W.F.' 4 primary 'Joachimiak, A.' 5 # _cell.length_a 90.239 _cell.length_b 90.239 _cell.length_c 156.081 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3O6D _cell.pdbx_unique_axis ? _cell.Z_PDB 16 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'I 4 2 2' _symmetry.entry_id 3O6D _symmetry.Int_Tables_number 97 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;Pyridoxine 5'-phosphate synthase ; 29468.754 1 2.6.99.2 ? ? ? 2 non-polymer syn "PYRIDOXINE-5'-PHOSPHATE" 249.158 1 ? ? ? ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 2 ? ? ? ? 4 water nat water 18.015 113 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PNP synthase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNA(MSE)LLGVNIDHIAVLRQAR(MSE)VNDPDLLEAAFIVARHGDQITLHVREDRRHAQDFDLENIIKFCKSPVNLEC ALNDEILNLALKLKPHRVTLVPEKREELTTEGGLCLNHAKLKQSIEKLQNANIEVSLFINPSLEDIEKSKILKAQFIELH TGHYANLHNALFSNISHTAFALKELDQDKKTLQAQFEKELQNLELCAKKGLELGLKVAAGHGLNYKNVKPVVKIKEICEL NIGQSIVARSVFTGLQNAILE(MSE)KELIKR ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAMLLGVNIDHIAVLRQARMVNDPDLLEAAFIVARHGDQITLHVREDRRHAQDFDLENIIKFCKSPVNLECALNDEILN LALKLKPHRVTLVPEKREELTTEGGLCLNHAKLKQSIEKLQNANIEVSLFINPSLEDIEKSKILKAQFIELHTGHYANLH NALFSNISHTAFALKELDQDKKTLQAQFEKELQNLELCAKKGLELGLKVAAGHGLNYKNVKPVVKIKEICELNIGQSIVA RSVFTGLQNAILEMKELIKR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier IDP90671 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 MSE n 1 5 LEU n 1 6 LEU n 1 7 GLY n 1 8 VAL n 1 9 ASN n 1 10 ILE n 1 11 ASP n 1 12 HIS n 1 13 ILE n 1 14 ALA n 1 15 VAL n 1 16 LEU n 1 17 ARG n 1 18 GLN n 1 19 ALA n 1 20 ARG n 1 21 MSE n 1 22 VAL n 1 23 ASN n 1 24 ASP n 1 25 PRO n 1 26 ASP n 1 27 LEU n 1 28 LEU n 1 29 GLU n 1 30 ALA n 1 31 ALA n 1 32 PHE n 1 33 ILE n 1 34 VAL n 1 35 ALA n 1 36 ARG n 1 37 HIS n 1 38 GLY n 1 39 ASP n 1 40 GLN n 1 41 ILE n 1 42 THR n 1 43 LEU n 1 44 HIS n 1 45 VAL n 1 46 ARG n 1 47 GLU n 1 48 ASP n 1 49 ARG n 1 50 ARG n 1 51 HIS n 1 52 ALA n 1 53 GLN n 1 54 ASP n 1 55 PHE n 1 56 ASP n 1 57 LEU n 1 58 GLU n 1 59 ASN n 1 60 ILE n 1 61 ILE n 1 62 LYS n 1 63 PHE n 1 64 CYS n 1 65 LYS n 1 66 SER n 1 67 PRO n 1 68 VAL n 1 69 ASN n 1 70 LEU n 1 71 GLU n 1 72 CYS n 1 73 ALA n 1 74 LEU n 1 75 ASN n 1 76 ASP n 1 77 GLU n 1 78 ILE n 1 79 LEU n 1 80 ASN n 1 81 LEU n 1 82 ALA n 1 83 LEU n 1 84 LYS n 1 85 LEU n 1 86 LYS n 1 87 PRO n 1 88 HIS n 1 89 ARG n 1 90 VAL n 1 91 THR n 1 92 LEU n 1 93 VAL n 1 94 PRO n 1 95 GLU n 1 96 LYS n 1 97 ARG n 1 98 GLU n 1 99 GLU n 1 100 LEU n 1 101 THR n 1 102 THR n 1 103 GLU n 1 104 GLY n 1 105 GLY n 1 106 LEU n 1 107 CYS n 1 108 LEU n 1 109 ASN n 1 110 HIS n 1 111 ALA n 1 112 LYS n 1 113 LEU n 1 114 LYS n 1 115 GLN n 1 116 SER n 1 117 ILE n 1 118 GLU n 1 119 LYS n 1 120 LEU n 1 121 GLN n 1 122 ASN n 1 123 ALA n 1 124 ASN n 1 125 ILE n 1 126 GLU n 1 127 VAL n 1 128 SER n 1 129 LEU n 1 130 PHE n 1 131 ILE n 1 132 ASN n 1 133 PRO n 1 134 SER n 1 135 LEU n 1 136 GLU n 1 137 ASP n 1 138 ILE n 1 139 GLU n 1 140 LYS n 1 141 SER n 1 142 LYS n 1 143 ILE n 1 144 LEU n 1 145 LYS n 1 146 ALA n 1 147 GLN n 1 148 PHE n 1 149 ILE n 1 150 GLU n 1 151 LEU n 1 152 HIS n 1 153 THR n 1 154 GLY n 1 155 HIS n 1 156 TYR n 1 157 ALA n 1 158 ASN n 1 159 LEU n 1 160 HIS n 1 161 ASN n 1 162 ALA n 1 163 LEU n 1 164 PHE n 1 165 SER n 1 166 ASN n 1 167 ILE n 1 168 SER n 1 169 HIS n 1 170 THR n 1 171 ALA n 1 172 PHE n 1 173 ALA n 1 174 LEU n 1 175 LYS n 1 176 GLU n 1 177 LEU n 1 178 ASP n 1 179 GLN n 1 180 ASP n 1 181 LYS n 1 182 LYS n 1 183 THR n 1 184 LEU n 1 185 GLN n 1 186 ALA n 1 187 GLN n 1 188 PHE n 1 189 GLU n 1 190 LYS n 1 191 GLU n 1 192 LEU n 1 193 GLN n 1 194 ASN n 1 195 LEU n 1 196 GLU n 1 197 LEU n 1 198 CYS n 1 199 ALA n 1 200 LYS n 1 201 LYS n 1 202 GLY n 1 203 LEU n 1 204 GLU n 1 205 LEU n 1 206 GLY n 1 207 LEU n 1 208 LYS n 1 209 VAL n 1 210 ALA n 1 211 ALA n 1 212 GLY n 1 213 HIS n 1 214 GLY n 1 215 LEU n 1 216 ASN n 1 217 TYR n 1 218 LYS n 1 219 ASN n 1 220 VAL n 1 221 LYS n 1 222 PRO n 1 223 VAL n 1 224 VAL n 1 225 LYS n 1 226 ILE n 1 227 LYS n 1 228 GLU n 1 229 ILE n 1 230 CYS n 1 231 GLU n 1 232 LEU n 1 233 ASN n 1 234 ILE n 1 235 GLY n 1 236 GLN n 1 237 SER n 1 238 ILE n 1 239 VAL n 1 240 ALA n 1 241 ARG n 1 242 SER n 1 243 VAL n 1 244 PHE n 1 245 THR n 1 246 GLY n 1 247 LEU n 1 248 GLN n 1 249 ASN n 1 250 ALA n 1 251 ILE n 1 252 LEU n 1 253 GLU n 1 254 MSE n 1 255 LYS n 1 256 GLU n 1 257 LEU n 1 258 ILE n 1 259 LYS n 1 260 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Cj1238, pdxJ' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'NCTC 11168' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Campylobacter jejuni subsp. jejuni' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 192222 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PDXJ_CAMJE _struct_ref.pdbx_db_accession Q9PN59 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MLLGVNIDHIAVLRQARMVNDPDLLEAAFIVARHGDQITLHVREDRRHAQDFDLENIIKFCKSPVNLECALNDEILNLAL KLKPHRVTLVPEKREELTTEGGLCLNHAKLKQSIEKLQNANIEVSLFINPSLEDIEKSKILKAQFIELHTGHYANLHNAL FSNISHTAFALKELDQDKKTLQAQFEKELQNLELCAKKGLELGLKVAAGHGLNYKNVKPVVKIKEICELNIGQSIVARSV FTGLQNAILEMKELIKR ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3O6D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 260 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9PN59 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 257 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 257 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3O6D SER A 1 ? UNP Q9PN59 ? ? 'EXPRESSION TAG' -2 1 1 3O6D ASN A 2 ? UNP Q9PN59 ? ? 'EXPRESSION TAG' -1 2 1 3O6D ALA A 3 ? UNP Q9PN59 ? ? 'EXPRESSION TAG' 0 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PXP non-polymer . "PYRIDOXINE-5'-PHOSPHATE" ? 'C8 H12 N O6 P' 249.158 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3O6D _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.70 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 54.37 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8 _exptl_crystal_grow.temp 289 _exptl_crystal_grow.pdbx_details ;0.056 M sodium phosphate, 1.344 di-potassium phosphate, (10 mM PYRIDOXINE-5'-PHOSPHATE was used for crystal soaking), pH 8, VAPOR DIFFUSION, SITTING DROP, temperature 289K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2010-04-21 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'double crystal monochromator' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID # _reflns.entry_id 3O6D _reflns.d_resolution_high 1.950 _reflns.d_resolution_low 31.9 _reflns.number_obs 23944 _reflns.pdbx_Rmerge_I_obs 0.070 _reflns.pdbx_netI_over_sigmaI 11.200 _reflns.pdbx_chi_squared 1.615 _reflns.pdbx_redundancy 6.800 _reflns.percent_possible_obs 99.900 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.number_all 23944 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 42.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 1.950 1.980 ? ? ? 0.774 2.37 ? 0.913 6.800 ? 1178 100.000 ? 1 1.980 2.020 ? ? ? 0.683 ? ? 0.961 6.900 ? 1186 100.000 ? 2 2.020 2.060 ? ? ? 0.570 ? ? 1.011 6.900 ? 1195 100.000 ? 3 2.060 2.100 ? ? ? 0.474 ? ? 0.996 7.000 ? 1151 100.000 ? 4 2.100 2.150 ? ? ? 0.398 ? ? 0.990 7.000 ? 1189 100.000 ? 5 2.150 2.200 ? ? ? 0.338 ? ? 1.042 6.900 ? 1172 100.000 ? 6 2.200 2.250 ? ? ? 0.282 ? ? 1.084 6.900 ? 1188 100.000 ? 7 2.250 2.310 ? ? ? 0.248 ? ? 1.116 6.900 ? 1164 100.000 ? 8 2.310 2.380 ? ? ? 0.195 ? ? 1.113 6.900 ? 1187 100.000 ? 9 2.380 2.460 ? ? ? 0.172 ? ? 1.152 6.900 ? 1194 100.000 ? 10 2.460 2.540 ? ? ? 0.143 ? ? 1.157 6.900 ? 1169 99.900 ? 11 2.540 2.650 ? ? ? 0.115 ? ? 1.293 6.900 ? 1195 100.000 ? 12 2.650 2.770 ? ? ? 0.099 ? ? 1.390 6.900 ? 1191 100.000 ? 13 2.770 2.910 ? ? ? 0.084 ? ? 1.513 6.800 ? 1213 100.000 ? 14 2.910 3.100 ? ? ? 0.068 ? ? 1.707 6.900 ? 1175 100.000 ? 15 3.100 3.330 ? ? ? 0.058 ? ? 1.992 6.800 ? 1215 100.000 ? 16 3.330 3.670 ? ? ? 0.056 ? ? 2.675 6.700 ? 1204 100.000 ? 17 3.670 4.200 ? ? ? 0.054 ? ? 3.496 6.600 ? 1231 99.800 ? 18 4.200 5.290 ? ? ? 0.041 ? ? 3.027 6.400 ? 1244 99.800 ? 19 5.290 50.000 ? ? ? 0.041 ? ? 3.867 6.100 ? 1303 98.500 ? 20 # _refine.entry_id 3O6D _refine.ls_d_res_high 1.9500 _refine.ls_d_res_low 32.0000 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.5500 _refine.ls_number_reflns_obs 23841 _refine.ls_number_reflns_all 23841 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES: RESIDUAL ONLY' _refine.ls_R_factor_all 0.1714 _refine.ls_R_factor_obs 0.1714 _refine.ls_R_factor_R_work 0.1700 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1971 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 1224 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 38.428 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 1.3400 _refine.aniso_B[2][2] 1.3400 _refine.aniso_B[3][3] -2.6800 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9680 _refine.correlation_coeff_Fo_to_Fc_free 0.9620 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.1240 _refine.overall_SU_ML 0.0900 _refine.overall_SU_B 7.1170 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 60.980 _refine.B_iso_min 13.980 _refine.occupancy_max 1.000 _refine.occupancy_min 0.200 _refine.pdbx_ls_sigma_I 0 _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2052 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 113 _refine_hist.number_atoms_total 2191 _refine_hist.d_res_high 1.9500 _refine_hist.d_res_low 32.0000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2214 0.019 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1511 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3005 1.594 1.984 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 3748 0.950 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 287 5.656 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 109 37.303 25.780 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 444 15.146 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 11 15.215 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 345 0.104 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 2443 0.008 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 391 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1338 0.915 1.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 538 0.266 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2171 1.670 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 876 2.873 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 820 4.617 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.9490 _refine_ls_shell.d_res_low 1.9990 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.7100 _refine_ls_shell.number_reflns_R_work 1628 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2380 _refine_ls_shell.R_factor_R_free 0.3040 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 92 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1720 _refine_ls_shell.number_reflns_obs 1720 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3O6D _struct.title ;Pyridoxal phosphate biosynthetic protein PdxJ from Campylobacter jejuni in complex with pyridoxine-5'-phosphate ; _struct.pdbx_descriptor ;Pyridoxine 5'-phosphate synthase (E.C.2.6.99.2) ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3O6D _struct_keywords.text ;structural genomics, IDP90671, Center for Structural Genomics of Infectious Diseases, CSGID, pyridoxine synthesis, Vitamin B6, pyridoxal phosphate, PdxJ, PYRIDOXINE-5'-PHOSPHATE, TRANSFERASE ; _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ILE A 10 ? MSE A 21 ? ILE A 7 MSE A 18 1 ? 12 HELX_P HELX_P2 2 ASP A 26 ? GLY A 38 ? ASP A 23 GLY A 35 1 ? 13 HELX_P HELX_P3 3 GLN A 53 ? CYS A 64 ? GLN A 50 CYS A 61 1 ? 12 HELX_P HELX_P4 4 ASN A 75 ? LYS A 86 ? ASN A 72 LYS A 83 1 ? 12 HELX_P HELX_P5 5 LYS A 96 ? LEU A 100 ? LYS A 93 LEU A 97 5 ? 5 HELX_P HELX_P6 6 LYS A 112 ? ALA A 123 ? LYS A 109 ALA A 120 1 ? 12 HELX_P HELX_P7 7 SER A 134 ? LEU A 144 ? SER A 131 LEU A 141 1 ? 11 HELX_P HELX_P8 8 THR A 153 ? SER A 165 ? THR A 150 SER A 162 1 ? 13 HELX_P HELX_P9 9 ASN A 166 ? THR A 170 ? ASN A 163 THR A 167 5 ? 5 HELX_P HELX_P10 10 LEU A 174 ? ASP A 178 ? LEU A 171 ASP A 175 5 ? 5 HELX_P HELX_P11 11 ASP A 180 ? LEU A 205 ? ASP A 177 LEU A 202 1 ? 26 HELX_P HELX_P12 12 VAL A 220 ? LYS A 225 ? VAL A 217 LYS A 222 1 ? 6 HELX_P HELX_P13 13 GLY A 235 ? GLY A 246 ? GLY A 232 GLY A 243 1 ? 12 HELX_P HELX_P14 14 GLY A 246 ? ILE A 258 ? GLY A 243 ILE A 255 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ALA 3 C ? ? ? 1_555 A MSE 4 N ? ? A ALA 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.334 ? covale2 covale ? ? A MSE 4 C ? ? ? 1_555 A LEU 5 N ? ? A MSE 1 A LEU 2 1_555 ? ? ? ? ? ? ? 1.333 ? covale3 covale ? ? A ARG 20 C ? ? ? 1_555 A MSE 21 N ? ? A ARG 17 A MSE 18 1_555 ? ? ? ? ? ? ? 1.323 ? covale4 covale ? ? A MSE 21 C ? ? ? 1_555 A VAL 22 N ? ? A MSE 18 A VAL 19 1_555 ? ? ? ? ? ? ? 1.343 ? covale5 covale ? ? A GLU 253 C ? ? ? 1_555 A MSE 254 N ? ? A GLU 250 A MSE 251 1_555 ? ? ? ? ? ? ? 1.327 ? covale6 covale ? ? A MSE 254 C ? ? ? 1_555 A LYS 255 N ? ? A MSE 251 A LYS 252 1_555 ? ? ? ? ? ? ? 1.321 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASP _struct_mon_prot_cis.label_seq_id 24 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASP _struct_mon_prot_cis.auth_seq_id 21 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 25 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 22 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -1.84 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 9 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel A 8 9 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 5 ? ASN A 9 ? LEU A 2 ASN A 6 A 2 GLN A 40 ? HIS A 44 ? GLN A 37 HIS A 41 A 3 VAL A 68 ? CYS A 72 ? VAL A 65 CYS A 69 A 4 ARG A 89 ? LEU A 92 ? ARG A 86 LEU A 89 A 5 GLU A 126 ? ILE A 131 ? GLU A 123 ILE A 128 A 6 PHE A 148 ? HIS A 152 ? PHE A 145 HIS A 149 A 7 LYS A 208 ? GLY A 212 ? LYS A 205 GLY A 209 A 8 GLU A 231 ? ILE A 234 ? GLU A 228 ILE A 231 A 9 LEU A 5 ? ASN A 9 ? LEU A 2 ASN A 6 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 8 ? N VAL A 5 O THR A 42 ? O THR A 39 A 2 3 N ILE A 41 ? N ILE A 38 O ASN A 69 ? O ASN A 66 A 3 4 N LEU A 70 ? N LEU A 67 O THR A 91 ? O THR A 88 A 4 5 N VAL A 90 ? N VAL A 87 O SER A 128 ? O SER A 125 A 5 6 N LEU A 129 ? N LEU A 126 O GLU A 150 ? O GLU A 147 A 6 7 N ILE A 149 ? N ILE A 146 O ALA A 210 ? O ALA A 207 A 7 8 N ALA A 211 ? N ALA A 208 O ASN A 233 ? O ASN A 230 A 8 9 O LEU A 232 ? O LEU A 229 N GLY A 7 ? N GLY A 4 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 15 'BINDING SITE FOR RESIDUE PXP A 801' AC2 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE PO4 A 802' AC3 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE PO4 A 803' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 15 ASN A 9 ? ASN A 6 . ? 1_555 ? 2 AC1 15 ARG A 20 ? ARG A 17 . ? 6_565 ? 3 AC1 15 GLU A 71 ? GLU A 68 . ? 1_555 ? 4 AC1 15 PHE A 130 ? PHE A 127 . ? 1_555 ? 5 AC1 15 GLU A 150 ? GLU A 147 . ? 1_555 ? 6 AC1 15 HIS A 213 ? HIS A 210 . ? 1_555 ? 7 AC1 15 GLY A 214 ? GLY A 211 . ? 1_555 ? 8 AC1 15 ASN A 233 ? ASN A 230 . ? 1_555 ? 9 AC1 15 ILE A 234 ? ILE A 231 . ? 1_555 ? 10 AC1 15 GLY A 235 ? GLY A 232 . ? 1_555 ? 11 AC1 15 GLN A 236 ? GLN A 233 . ? 1_555 ? 12 AC1 15 HOH E . ? HOH A 258 . ? 1_555 ? 13 AC1 15 HOH E . ? HOH A 263 . ? 1_555 ? 14 AC1 15 HOH E . ? HOH A 270 . ? 1_555 ? 15 AC1 15 PO4 C . ? PO4 A 802 . ? 1_555 ? 16 AC2 9 ASP A 11 ? ASP A 8 . ? 1_555 ? 17 AC2 9 HIS A 12 ? HIS A 9 . ? 1_555 ? 18 AC2 9 ARG A 20 ? ARG A 17 . ? 6_565 ? 19 AC2 9 HIS A 51 ? HIS A 48 . ? 1_555 ? 20 AC2 9 HOH E . ? HOH A 258 . ? 1_555 ? 21 AC2 9 HOH E . ? HOH A 287 . ? 1_555 ? 22 AC2 9 HOH E . ? HOH A 320 . ? 1_555 ? 23 AC2 9 HOH E . ? HOH A 328 . ? 1_555 ? 24 AC2 9 PXP B . ? PXP A 801 . ? 1_555 ? 25 AC3 1 ASN A 158 ? ASN A 155 . ? 6_565 ? # _atom_sites.entry_id 3O6D _atom_sites.fract_transf_matrix[1][1] 0.011082 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011082 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006407 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 -1 ASN ASN A . n A 1 3 ALA 3 0 0 ALA ALA A . n A 1 4 MSE 4 1 1 MSE MSE A . n A 1 5 LEU 5 2 2 LEU LEU A . n A 1 6 LEU 6 3 3 LEU LEU A . n A 1 7 GLY 7 4 4 GLY GLY A . n A 1 8 VAL 8 5 5 VAL VAL A . n A 1 9 ASN 9 6 6 ASN ASN A . n A 1 10 ILE 10 7 7 ILE ILE A . n A 1 11 ASP 11 8 8 ASP ASP A . n A 1 12 HIS 12 9 9 HIS HIS A . n A 1 13 ILE 13 10 10 ILE ILE A . n A 1 14 ALA 14 11 11 ALA ALA A . n A 1 15 VAL 15 12 12 VAL VAL A . n A 1 16 LEU 16 13 13 LEU LEU A . n A 1 17 ARG 17 14 14 ARG ARG A . n A 1 18 GLN 18 15 15 GLN GLN A . n A 1 19 ALA 19 16 16 ALA ALA A . n A 1 20 ARG 20 17 17 ARG ARG A . n A 1 21 MSE 21 18 18 MSE MSE A . n A 1 22 VAL 22 19 19 VAL VAL A . n A 1 23 ASN 23 20 20 ASN ASN A . n A 1 24 ASP 24 21 21 ASP ASP A . n A 1 25 PRO 25 22 22 PRO PRO A . n A 1 26 ASP 26 23 23 ASP ASP A . n A 1 27 LEU 27 24 24 LEU LEU A . n A 1 28 LEU 28 25 25 LEU LEU A . n A 1 29 GLU 29 26 26 GLU GLU A . n A 1 30 ALA 30 27 27 ALA ALA A . n A 1 31 ALA 31 28 28 ALA ALA A . n A 1 32 PHE 32 29 29 PHE PHE A . n A 1 33 ILE 33 30 30 ILE ILE A . n A 1 34 VAL 34 31 31 VAL VAL A . n A 1 35 ALA 35 32 32 ALA ALA A . n A 1 36 ARG 36 33 33 ARG ARG A . n A 1 37 HIS 37 34 34 HIS HIS A . n A 1 38 GLY 38 35 35 GLY GLY A . n A 1 39 ASP 39 36 36 ASP ASP A . n A 1 40 GLN 40 37 37 GLN GLN A . n A 1 41 ILE 41 38 38 ILE ILE A . n A 1 42 THR 42 39 39 THR THR A . n A 1 43 LEU 43 40 40 LEU LEU A . n A 1 44 HIS 44 41 41 HIS HIS A . n A 1 45 VAL 45 42 42 VAL VAL A . n A 1 46 ARG 46 43 43 ARG ARG A . n A 1 47 GLU 47 44 44 GLU GLU A . n A 1 48 ASP 48 45 45 ASP ASP A . n A 1 49 ARG 49 46 46 ARG ARG A . n A 1 50 ARG 50 47 47 ARG ARG A . n A 1 51 HIS 51 48 48 HIS HIS A . n A 1 52 ALA 52 49 49 ALA ALA A . n A 1 53 GLN 53 50 50 GLN GLN A . n A 1 54 ASP 54 51 51 ASP ASP A . n A 1 55 PHE 55 52 52 PHE PHE A . n A 1 56 ASP 56 53 53 ASP ASP A . n A 1 57 LEU 57 54 54 LEU LEU A . n A 1 58 GLU 58 55 55 GLU GLU A . n A 1 59 ASN 59 56 56 ASN ASN A . n A 1 60 ILE 60 57 57 ILE ILE A . n A 1 61 ILE 61 58 58 ILE ILE A . n A 1 62 LYS 62 59 59 LYS LYS A . n A 1 63 PHE 63 60 60 PHE PHE A . n A 1 64 CYS 64 61 61 CYS CYS A . n A 1 65 LYS 65 62 62 LYS LYS A . n A 1 66 SER 66 63 63 SER SER A . n A 1 67 PRO 67 64 64 PRO PRO A . n A 1 68 VAL 68 65 65 VAL VAL A . n A 1 69 ASN 69 66 66 ASN ASN A . n A 1 70 LEU 70 67 67 LEU LEU A . n A 1 71 GLU 71 68 68 GLU GLU A . n A 1 72 CYS 72 69 69 CYS CYS A . n A 1 73 ALA 73 70 70 ALA ALA A . n A 1 74 LEU 74 71 71 LEU LEU A . n A 1 75 ASN 75 72 72 ASN ASN A . n A 1 76 ASP 76 73 73 ASP ASP A . n A 1 77 GLU 77 74 74 GLU GLU A . n A 1 78 ILE 78 75 75 ILE ILE A . n A 1 79 LEU 79 76 76 LEU LEU A . n A 1 80 ASN 80 77 77 ASN ASN A . n A 1 81 LEU 81 78 78 LEU LEU A . n A 1 82 ALA 82 79 79 ALA ALA A . n A 1 83 LEU 83 80 80 LEU LEU A . n A 1 84 LYS 84 81 81 LYS LYS A . n A 1 85 LEU 85 82 82 LEU LEU A . n A 1 86 LYS 86 83 83 LYS LYS A . n A 1 87 PRO 87 84 84 PRO PRO A . n A 1 88 HIS 88 85 85 HIS HIS A . n A 1 89 ARG 89 86 86 ARG ARG A . n A 1 90 VAL 90 87 87 VAL VAL A . n A 1 91 THR 91 88 88 THR THR A . n A 1 92 LEU 92 89 89 LEU LEU A . n A 1 93 VAL 93 90 90 VAL VAL A . n A 1 94 PRO 94 91 91 PRO PRO A . n A 1 95 GLU 95 92 92 GLU GLU A . n A 1 96 LYS 96 93 93 LYS LYS A . n A 1 97 ARG 97 94 94 ARG ARG A . n A 1 98 GLU 98 95 95 GLU GLU A . n A 1 99 GLU 99 96 96 GLU GLU A . n A 1 100 LEU 100 97 97 LEU LEU A . n A 1 101 THR 101 98 98 THR THR A . n A 1 102 THR 102 99 99 THR THR A . n A 1 103 GLU 103 100 100 GLU GLU A . n A 1 104 GLY 104 101 101 GLY GLY A . n A 1 105 GLY 105 102 102 GLY GLY A . n A 1 106 LEU 106 103 103 LEU LEU A . n A 1 107 CYS 107 104 104 CYS CYS A . n A 1 108 LEU 108 105 105 LEU LEU A . n A 1 109 ASN 109 106 106 ASN ASN A . n A 1 110 HIS 110 107 107 HIS HIS A . n A 1 111 ALA 111 108 108 ALA ALA A . n A 1 112 LYS 112 109 109 LYS LYS A . n A 1 113 LEU 113 110 110 LEU LEU A . n A 1 114 LYS 114 111 111 LYS LYS A . n A 1 115 GLN 115 112 112 GLN GLN A . n A 1 116 SER 116 113 113 SER SER A . n A 1 117 ILE 117 114 114 ILE ILE A . n A 1 118 GLU 118 115 115 GLU GLU A . n A 1 119 LYS 119 116 116 LYS LYS A . n A 1 120 LEU 120 117 117 LEU LEU A . n A 1 121 GLN 121 118 118 GLN GLN A . n A 1 122 ASN 122 119 119 ASN ASN A . n A 1 123 ALA 123 120 120 ALA ALA A . n A 1 124 ASN 124 121 121 ASN ASN A . n A 1 125 ILE 125 122 122 ILE ILE A . n A 1 126 GLU 126 123 123 GLU GLU A . n A 1 127 VAL 127 124 124 VAL VAL A . n A 1 128 SER 128 125 125 SER SER A . n A 1 129 LEU 129 126 126 LEU LEU A . n A 1 130 PHE 130 127 127 PHE PHE A . n A 1 131 ILE 131 128 128 ILE ILE A . n A 1 132 ASN 132 129 129 ASN ASN A . n A 1 133 PRO 133 130 130 PRO PRO A . n A 1 134 SER 134 131 131 SER SER A . n A 1 135 LEU 135 132 132 LEU LEU A . n A 1 136 GLU 136 133 133 GLU GLU A . n A 1 137 ASP 137 134 134 ASP ASP A . n A 1 138 ILE 138 135 135 ILE ILE A . n A 1 139 GLU 139 136 136 GLU GLU A . n A 1 140 LYS 140 137 137 LYS LYS A . n A 1 141 SER 141 138 138 SER SER A . n A 1 142 LYS 142 139 139 LYS LYS A . n A 1 143 ILE 143 140 140 ILE ILE A . n A 1 144 LEU 144 141 141 LEU LEU A . n A 1 145 LYS 145 142 142 LYS LYS A . n A 1 146 ALA 146 143 143 ALA ALA A . n A 1 147 GLN 147 144 144 GLN GLN A . n A 1 148 PHE 148 145 145 PHE PHE A . n A 1 149 ILE 149 146 146 ILE ILE A . n A 1 150 GLU 150 147 147 GLU GLU A . n A 1 151 LEU 151 148 148 LEU LEU A . n A 1 152 HIS 152 149 149 HIS HIS A . n A 1 153 THR 153 150 150 THR THR A . n A 1 154 GLY 154 151 151 GLY GLY A . n A 1 155 HIS 155 152 152 HIS HIS A . n A 1 156 TYR 156 153 153 TYR TYR A . n A 1 157 ALA 157 154 154 ALA ALA A . n A 1 158 ASN 158 155 155 ASN ASN A . n A 1 159 LEU 159 156 156 LEU LEU A . n A 1 160 HIS 160 157 157 HIS HIS A . n A 1 161 ASN 161 158 158 ASN ASN A . n A 1 162 ALA 162 159 159 ALA ALA A . n A 1 163 LEU 163 160 160 LEU LEU A . n A 1 164 PHE 164 161 161 PHE PHE A . n A 1 165 SER 165 162 162 SER SER A . n A 1 166 ASN 166 163 163 ASN ASN A . n A 1 167 ILE 167 164 164 ILE ILE A . n A 1 168 SER 168 165 165 SER SER A . n A 1 169 HIS 169 166 166 HIS HIS A . n A 1 170 THR 170 167 167 THR THR A . n A 1 171 ALA 171 168 168 ALA ALA A . n A 1 172 PHE 172 169 169 PHE PHE A . n A 1 173 ALA 173 170 170 ALA ALA A . n A 1 174 LEU 174 171 171 LEU LEU A . n A 1 175 LYS 175 172 172 LYS LYS A . n A 1 176 GLU 176 173 173 GLU GLU A . n A 1 177 LEU 177 174 174 LEU LEU A . n A 1 178 ASP 178 175 175 ASP ASP A . n A 1 179 GLN 179 176 176 GLN GLN A . n A 1 180 ASP 180 177 177 ASP ASP A . n A 1 181 LYS 181 178 178 LYS LYS A . n A 1 182 LYS 182 179 179 LYS LYS A . n A 1 183 THR 183 180 180 THR THR A . n A 1 184 LEU 184 181 181 LEU LEU A . n A 1 185 GLN 185 182 182 GLN GLN A . n A 1 186 ALA 186 183 183 ALA ALA A . n A 1 187 GLN 187 184 184 GLN GLN A . n A 1 188 PHE 188 185 185 PHE PHE A . n A 1 189 GLU 189 186 186 GLU GLU A . n A 1 190 LYS 190 187 187 LYS LYS A . n A 1 191 GLU 191 188 188 GLU GLU A . n A 1 192 LEU 192 189 189 LEU LEU A . n A 1 193 GLN 193 190 190 GLN GLN A . n A 1 194 ASN 194 191 191 ASN ASN A . n A 1 195 LEU 195 192 192 LEU LEU A . n A 1 196 GLU 196 193 193 GLU GLU A . n A 1 197 LEU 197 194 194 LEU LEU A . n A 1 198 CYS 198 195 195 CYS CYS A . n A 1 199 ALA 199 196 196 ALA ALA A . n A 1 200 LYS 200 197 197 LYS LYS A . n A 1 201 LYS 201 198 198 LYS LYS A . n A 1 202 GLY 202 199 199 GLY GLY A . n A 1 203 LEU 203 200 200 LEU LEU A . n A 1 204 GLU 204 201 201 GLU GLU A . n A 1 205 LEU 205 202 202 LEU LEU A . n A 1 206 GLY 206 203 203 GLY GLY A . n A 1 207 LEU 207 204 204 LEU LEU A . n A 1 208 LYS 208 205 205 LYS LYS A . n A 1 209 VAL 209 206 206 VAL VAL A . n A 1 210 ALA 210 207 207 ALA ALA A . n A 1 211 ALA 211 208 208 ALA ALA A . n A 1 212 GLY 212 209 209 GLY GLY A . n A 1 213 HIS 213 210 210 HIS HIS A . n A 1 214 GLY 214 211 211 GLY GLY A . n A 1 215 LEU 215 212 212 LEU LEU A . n A 1 216 ASN 216 213 213 ASN ASN A . n A 1 217 TYR 217 214 214 TYR TYR A . n A 1 218 LYS 218 215 215 LYS LYS A . n A 1 219 ASN 219 216 216 ASN ASN A . n A 1 220 VAL 220 217 217 VAL VAL A . n A 1 221 LYS 221 218 218 LYS LYS A . n A 1 222 PRO 222 219 219 PRO PRO A . n A 1 223 VAL 223 220 220 VAL VAL A . n A 1 224 VAL 224 221 221 VAL VAL A . n A 1 225 LYS 225 222 222 LYS LYS A . n A 1 226 ILE 226 223 223 ILE ILE A . n A 1 227 LYS 227 224 224 LYS LYS A . n A 1 228 GLU 228 225 225 GLU GLU A . n A 1 229 ILE 229 226 226 ILE ILE A . n A 1 230 CYS 230 227 227 CYS CYS A . n A 1 231 GLU 231 228 228 GLU GLU A . n A 1 232 LEU 232 229 229 LEU LEU A . n A 1 233 ASN 233 230 230 ASN ASN A . n A 1 234 ILE 234 231 231 ILE ILE A . n A 1 235 GLY 235 232 232 GLY GLY A . n A 1 236 GLN 236 233 233 GLN GLN A . n A 1 237 SER 237 234 234 SER SER A . n A 1 238 ILE 238 235 235 ILE ILE A . n A 1 239 VAL 239 236 236 VAL VAL A . n A 1 240 ALA 240 237 237 ALA ALA A . n A 1 241 ARG 241 238 238 ARG ARG A . n A 1 242 SER 242 239 239 SER SER A . n A 1 243 VAL 243 240 240 VAL VAL A . n A 1 244 PHE 244 241 241 PHE PHE A . n A 1 245 THR 245 242 242 THR THR A . n A 1 246 GLY 246 243 243 GLY GLY A . n A 1 247 LEU 247 244 244 LEU LEU A . n A 1 248 GLN 248 245 245 GLN GLN A . n A 1 249 ASN 249 246 246 ASN ASN A . n A 1 250 ALA 250 247 247 ALA ALA A . n A 1 251 ILE 251 248 248 ILE ILE A . n A 1 252 LEU 252 249 249 LEU LEU A . n A 1 253 GLU 253 250 250 GLU GLU A . n A 1 254 MSE 254 251 251 MSE MSE A . n A 1 255 LYS 255 252 252 LYS LYS A . n A 1 256 GLU 256 253 253 GLU GLU A . n A 1 257 LEU 257 254 254 LEU LEU A . n A 1 258 ILE 258 255 255 ILE ILE A . n A 1 259 LYS 259 256 256 LYS LYS A . n A 1 260 ARG 260 257 257 ARG ARG A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Center for Structural Genomics of Infectious Diseases' _pdbx_SG_project.initial_of_center CSGID # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PXP 1 801 801 PXP PXP A . C 3 PO4 1 802 802 PO4 PO4 A . D 3 PO4 1 803 803 PO4 PO4 A . E 4 HOH 1 258 1 HOH HOH A . E 4 HOH 2 259 2 HOH HOH A . E 4 HOH 3 260 3 HOH HOH A . E 4 HOH 4 261 4 HOH HOH A . E 4 HOH 5 262 5 HOH HOH A . E 4 HOH 6 263 6 HOH HOH A . E 4 HOH 7 264 7 HOH HOH A . E 4 HOH 8 265 8 HOH HOH A . E 4 HOH 9 266 9 HOH HOH A . E 4 HOH 10 267 10 HOH HOH A . E 4 HOH 11 268 11 HOH HOH A . E 4 HOH 12 269 12 HOH HOH A . E 4 HOH 13 270 13 HOH HOH A . E 4 HOH 14 271 14 HOH HOH A . E 4 HOH 15 272 15 HOH HOH A . E 4 HOH 16 273 16 HOH HOH A . E 4 HOH 17 274 17 HOH HOH A . E 4 HOH 18 275 18 HOH HOH A . E 4 HOH 19 276 19 HOH HOH A . E 4 HOH 20 277 20 HOH HOH A . E 4 HOH 21 278 21 HOH HOH A . E 4 HOH 22 279 22 HOH HOH A . E 4 HOH 23 280 23 HOH HOH A . E 4 HOH 24 281 24 HOH HOH A . E 4 HOH 25 282 25 HOH HOH A . E 4 HOH 26 283 26 HOH HOH A . E 4 HOH 27 284 27 HOH HOH A . E 4 HOH 28 285 28 HOH HOH A . E 4 HOH 29 286 29 HOH HOH A . E 4 HOH 30 287 30 HOH HOH A . E 4 HOH 31 288 31 HOH HOH A . E 4 HOH 32 289 32 HOH HOH A . E 4 HOH 33 290 33 HOH HOH A . E 4 HOH 34 291 34 HOH HOH A . E 4 HOH 35 292 35 HOH HOH A . E 4 HOH 36 293 36 HOH HOH A . E 4 HOH 37 294 37 HOH HOH A . E 4 HOH 38 295 38 HOH HOH A . E 4 HOH 39 296 39 HOH HOH A . E 4 HOH 40 297 40 HOH HOH A . E 4 HOH 41 298 41 HOH HOH A . E 4 HOH 42 299 42 HOH HOH A . E 4 HOH 43 300 43 HOH HOH A . E 4 HOH 44 301 44 HOH HOH A . E 4 HOH 45 302 45 HOH HOH A . E 4 HOH 46 303 46 HOH HOH A . E 4 HOH 47 304 47 HOH HOH A . E 4 HOH 48 305 48 HOH HOH A . E 4 HOH 49 306 49 HOH HOH A . E 4 HOH 50 307 50 HOH HOH A . E 4 HOH 51 308 51 HOH HOH A . E 4 HOH 52 309 52 HOH HOH A . E 4 HOH 53 310 53 HOH HOH A . E 4 HOH 54 311 54 HOH HOH A . E 4 HOH 55 312 55 HOH HOH A . E 4 HOH 56 313 56 HOH HOH A . E 4 HOH 57 314 57 HOH HOH A . E 4 HOH 58 315 58 HOH HOH A . E 4 HOH 59 316 59 HOH HOH A . E 4 HOH 60 317 60 HOH HOH A . E 4 HOH 61 318 61 HOH HOH A . E 4 HOH 62 319 62 HOH HOH A . E 4 HOH 63 320 63 HOH HOH A . E 4 HOH 64 321 64 HOH HOH A . E 4 HOH 65 322 65 HOH HOH A . E 4 HOH 66 323 66 HOH HOH A . E 4 HOH 67 324 67 HOH HOH A . E 4 HOH 68 325 68 HOH HOH A . E 4 HOH 69 326 69 HOH HOH A . E 4 HOH 70 327 70 HOH HOH A . E 4 HOH 71 328 71 HOH HOH A . E 4 HOH 72 329 72 HOH HOH A . E 4 HOH 73 330 73 HOH HOH A . E 4 HOH 74 331 74 HOH HOH A . E 4 HOH 75 332 75 HOH HOH A . E 4 HOH 76 333 76 HOH HOH A . E 4 HOH 77 334 77 HOH HOH A . E 4 HOH 78 335 78 HOH HOH A . E 4 HOH 79 336 79 HOH HOH A . E 4 HOH 80 337 80 HOH HOH A . E 4 HOH 81 338 81 HOH HOH A . E 4 HOH 82 339 82 HOH HOH A . E 4 HOH 83 340 83 HOH HOH A . E 4 HOH 84 341 84 HOH HOH A . E 4 HOH 85 342 85 HOH HOH A . E 4 HOH 86 343 86 HOH HOH A . E 4 HOH 87 344 87 HOH HOH A . E 4 HOH 88 345 88 HOH HOH A . E 4 HOH 89 346 89 HOH HOH A . E 4 HOH 90 347 90 HOH HOH A . E 4 HOH 91 348 91 HOH HOH A . E 4 HOH 92 349 92 HOH HOH A . E 4 HOH 93 350 93 HOH HOH A . E 4 HOH 94 351 94 HOH HOH A . E 4 HOH 95 352 95 HOH HOH A . E 4 HOH 96 353 96 HOH HOH A . E 4 HOH 97 354 97 HOH HOH A . E 4 HOH 98 355 98 HOH HOH A . E 4 HOH 99 356 99 HOH HOH A . E 4 HOH 100 357 100 HOH HOH A . E 4 HOH 101 358 101 HOH HOH A . E 4 HOH 102 359 102 HOH HOH A . E 4 HOH 103 360 103 HOH HOH A . E 4 HOH 104 361 104 HOH HOH A . E 4 HOH 105 362 105 HOH HOH A . E 4 HOH 106 363 106 HOH HOH A . E 4 HOH 107 364 107 HOH HOH A . E 4 HOH 108 365 108 HOH HOH A . E 4 HOH 109 366 109 HOH HOH A . E 4 HOH 110 367 110 HOH HOH A . E 4 HOH 111 368 111 HOH HOH A . E 4 HOH 112 369 112 HOH HOH A . E 4 HOH 113 370 113 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 4 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 21 A MSE 18 ? MET SELENOMETHIONINE 3 A MSE 254 A MSE 251 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5100 ? 1 MORE -54 ? 1 'SSA (A^2)' 22260 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_565 x,-y+1,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 90.2390000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-08-11 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 17.7432 _pdbx_refine_tls.origin_y 40.5777 _pdbx_refine_tls.origin_z 17.3212 _pdbx_refine_tls.T[1][1] 0.0229 _pdbx_refine_tls.T[2][2] 0.0665 _pdbx_refine_tls.T[3][3] 0.0586 _pdbx_refine_tls.T[1][2] -0.0059 _pdbx_refine_tls.T[1][3] 0.0240 _pdbx_refine_tls.T[2][3] 0.0332 _pdbx_refine_tls.L[1][1] 0.6255 _pdbx_refine_tls.L[2][2] 0.9579 _pdbx_refine_tls.L[3][3] 1.3192 _pdbx_refine_tls.L[1][2] 0.0446 _pdbx_refine_tls.L[1][3] -0.4553 _pdbx_refine_tls.L[2][3] -0.0102 _pdbx_refine_tls.S[1][1] 0.0380 _pdbx_refine_tls.S[2][2] -0.0124 _pdbx_refine_tls.S[3][3] -0.0256 _pdbx_refine_tls.S[1][2] -0.0696 _pdbx_refine_tls.S[1][3] 0.0348 _pdbx_refine_tls.S[2][3] 0.0593 _pdbx_refine_tls.S[2][1] 0.1078 _pdbx_refine_tls.S[3][1] -0.0057 _pdbx_refine_tls.S[3][2] -0.0266 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id -10 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 9999 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 REFMAC 5.5.0109 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 SBC-Collect . ? ? ? ? 'data collection' ? ? ? 6 HKL-3000 . ? ? ? ? 'data reduction' ? ? ? 7 HKL-3000 . ? ? ? ? 'data scaling' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 MLPHARE . ? ? ? ? phasing ? ? ? 10 DM . ? ? ? ? phasing ? ? ? 11 SOLVE . ? ? ? ? phasing ? ? ? 12 RESOLVE . ? ? ? ? phasing ? ? ? 13 HKL-3000 . ? ? ? ? phasing ? ? ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 238 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 A _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 238 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 A _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 238 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 A _pdbx_validate_rmsd_angle.angle_value 124.46 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 4.16 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 48 ? ? -131.52 -86.04 2 1 LEU A 71 ? ? -96.21 31.20 3 1 LYS A 83 ? ? 60.93 62.17 4 1 HIS A 210 ? ? 104.50 110.27 5 1 HIS A 210 ? ? 99.40 115.44 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id SER _pdbx_unobs_or_zero_occ_residues.auth_seq_id -2 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id SER _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "PYRIDOXINE-5'-PHOSPHATE" PXP 3 'PHOSPHATE ION' PO4 4 water HOH #