data_3O6P # _entry.id 3O6P # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3O6P RCSB RCSB060733 WWPDB D_1000060733 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC62863.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3O6P _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-07-29 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chang, C.' 1 'Bigelow, L.' 2 'Bearden, J.' 3 'Joachimiak, A.' 4 'Midwest Center for Structural Genomics (MCSG)' 5 # _citation.id primary _citation.title 'Crystal structure of peptide ABC transporter, peptide-binding protein' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Chang, C.' 1 primary 'Bigelow, L.' 2 primary 'Bearden, J.' 3 primary 'Joachimiak, A.' 4 # _cell.length_a 50.733 _cell.length_b 53.653 _cell.length_c 79.498 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3O6P _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 3O6P _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 19 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Peptide ABC transporter, peptide-binding protein' 25408.211 1 ? ? 'residues 306-526' ? 2 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 3 water nat water 18.015 305 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNAASTQY(MSE)ELNQRDEKSPFRNANLRKAISYSIDRKALVESILGDGSIEPNGLVPAD(MSE)AKDPSGGKDFAKEA GSQIEYDTKKAKEYWEKAKKELGISTLT(MSE)DILSSDADSSKKTVEFVQGSIQDALDGVKVTVSPVPFSVRLDRSNKG DFDAVIGGWSADYADPSSFLDLFASDNSYNRGRYNNAEFDKFVKAASSADATDPEKRWDD(MSE)LNAEKTI(MSE)GD (MSE)GVVPLFQKS ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAASTQYMELNQRDEKSPFRNANLRKAISYSIDRKALVESILGDGSIEPNGLVPADMAKDPSGGKDFAKEAGSQIEYDT KKAKEYWEKAKKELGISTLTMDILSSDADSSKKTVEFVQGSIQDALDGVKVTVSPVPFSVRLDRSNKGDFDAVIGGWSAD YADPSSFLDLFASDNSYNRGRYNNAEFDKFVKAASSADATDPEKRWDDMLNAEKTIMGDMGVVPLFQKS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC62863.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 ALA n 1 5 SER n 1 6 THR n 1 7 GLN n 1 8 TYR n 1 9 MSE n 1 10 GLU n 1 11 LEU n 1 12 ASN n 1 13 GLN n 1 14 ARG n 1 15 ASP n 1 16 GLU n 1 17 LYS n 1 18 SER n 1 19 PRO n 1 20 PHE n 1 21 ARG n 1 22 ASN n 1 23 ALA n 1 24 ASN n 1 25 LEU n 1 26 ARG n 1 27 LYS n 1 28 ALA n 1 29 ILE n 1 30 SER n 1 31 TYR n 1 32 SER n 1 33 ILE n 1 34 ASP n 1 35 ARG n 1 36 LYS n 1 37 ALA n 1 38 LEU n 1 39 VAL n 1 40 GLU n 1 41 SER n 1 42 ILE n 1 43 LEU n 1 44 GLY n 1 45 ASP n 1 46 GLY n 1 47 SER n 1 48 ILE n 1 49 GLU n 1 50 PRO n 1 51 ASN n 1 52 GLY n 1 53 LEU n 1 54 VAL n 1 55 PRO n 1 56 ALA n 1 57 ASP n 1 58 MSE n 1 59 ALA n 1 60 LYS n 1 61 ASP n 1 62 PRO n 1 63 SER n 1 64 GLY n 1 65 GLY n 1 66 LYS n 1 67 ASP n 1 68 PHE n 1 69 ALA n 1 70 LYS n 1 71 GLU n 1 72 ALA n 1 73 GLY n 1 74 SER n 1 75 GLN n 1 76 ILE n 1 77 GLU n 1 78 TYR n 1 79 ASP n 1 80 THR n 1 81 LYS n 1 82 LYS n 1 83 ALA n 1 84 LYS n 1 85 GLU n 1 86 TYR n 1 87 TRP n 1 88 GLU n 1 89 LYS n 1 90 ALA n 1 91 LYS n 1 92 LYS n 1 93 GLU n 1 94 LEU n 1 95 GLY n 1 96 ILE n 1 97 SER n 1 98 THR n 1 99 LEU n 1 100 THR n 1 101 MSE n 1 102 ASP n 1 103 ILE n 1 104 LEU n 1 105 SER n 1 106 SER n 1 107 ASP n 1 108 ALA n 1 109 ASP n 1 110 SER n 1 111 SER n 1 112 LYS n 1 113 LYS n 1 114 THR n 1 115 VAL n 1 116 GLU n 1 117 PHE n 1 118 VAL n 1 119 GLN n 1 120 GLY n 1 121 SER n 1 122 ILE n 1 123 GLN n 1 124 ASP n 1 125 ALA n 1 126 LEU n 1 127 ASP n 1 128 GLY n 1 129 VAL n 1 130 LYS n 1 131 VAL n 1 132 THR n 1 133 VAL n 1 134 SER n 1 135 PRO n 1 136 VAL n 1 137 PRO n 1 138 PHE n 1 139 SER n 1 140 VAL n 1 141 ARG n 1 142 LEU n 1 143 ASP n 1 144 ARG n 1 145 SER n 1 146 ASN n 1 147 LYS n 1 148 GLY n 1 149 ASP n 1 150 PHE n 1 151 ASP n 1 152 ALA n 1 153 VAL n 1 154 ILE n 1 155 GLY n 1 156 GLY n 1 157 TRP n 1 158 SER n 1 159 ALA n 1 160 ASP n 1 161 TYR n 1 162 ALA n 1 163 ASP n 1 164 PRO n 1 165 SER n 1 166 SER n 1 167 PHE n 1 168 LEU n 1 169 ASP n 1 170 LEU n 1 171 PHE n 1 172 ALA n 1 173 SER n 1 174 ASP n 1 175 ASN n 1 176 SER n 1 177 TYR n 1 178 ASN n 1 179 ARG n 1 180 GLY n 1 181 ARG n 1 182 TYR n 1 183 ASN n 1 184 ASN n 1 185 ALA n 1 186 GLU n 1 187 PHE n 1 188 ASP n 1 189 LYS n 1 190 PHE n 1 191 VAL n 1 192 LYS n 1 193 ALA n 1 194 ALA n 1 195 SER n 1 196 SER n 1 197 ALA n 1 198 ASP n 1 199 ALA n 1 200 THR n 1 201 ASP n 1 202 PRO n 1 203 GLU n 1 204 LYS n 1 205 ARG n 1 206 TRP n 1 207 ASP n 1 208 ASP n 1 209 MSE n 1 210 LEU n 1 211 ASN n 1 212 ALA n 1 213 GLU n 1 214 LYS n 1 215 THR n 1 216 ILE n 1 217 MSE n 1 218 GLY n 1 219 ASP n 1 220 MSE n 1 221 GLY n 1 222 VAL n 1 223 VAL n 1 224 PRO n 1 225 LEU n 1 226 PHE n 1 227 GLN n 1 228 LYS n 1 229 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Streptococcus faecalis' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene EF_0907 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain V583 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Enterococcus faecalis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 226185 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q837D6_ENTFA _struct_ref.pdbx_db_accession Q837D6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MELNQRDEKSPFRNANLRKAISYSIDRKALVESILGDGSIEPNGLVPADMAKDPSGGKDFAKEAGSQIEYDTKKAKEYWE KAKKELGISTLTMDILSSDADSSKKTVEFVQGSIQDALDGVKVTVSPVPFSVRLDRSNKGDFDAVIGGWSADYADPSSFL DLFASDNSYNRGRYNNAEFDKFVKAASSADATDPEKRWDDMLNAEKTIMGDMGVVPLFQKS ; _struct_ref.pdbx_align_begin 306 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3O6P _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 9 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 229 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q837D6 _struct_ref_seq.db_align_beg 306 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 526 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 306 _struct_ref_seq.pdbx_auth_seq_align_end 526 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3O6P SER A 1 ? UNP Q837D6 ? ? 'expression tag' 298 1 1 3O6P ASN A 2 ? UNP Q837D6 ? ? 'expression tag' 299 2 1 3O6P ALA A 3 ? UNP Q837D6 ? ? 'expression tag' 300 3 1 3O6P ALA A 4 ? UNP Q837D6 ? ? 'expression tag' 301 4 1 3O6P SER A 5 ? UNP Q837D6 ? ? 'expression tag' 302 5 1 3O6P THR A 6 ? UNP Q837D6 ? ? 'expression tag' 303 6 1 3O6P GLN A 7 ? UNP Q837D6 ? ? 'expression tag' 304 7 1 3O6P TYR A 8 ? UNP Q837D6 ? ? 'expression tag' 305 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3O6P _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.12 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 42.07 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.temp 297 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '0.2M Zinc acetate, 0.1M imidazole, 35% 2-propanol, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 297K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2010-06-12 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si(111) double crystal' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97931 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97931 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID # _reflns.entry_id 3O6P _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3 _reflns.d_resolution_high 1.65 _reflns.d_resolution_low 50 _reflns.number_all 26921 _reflns.number_obs 26442 _reflns.percent_possible_obs 98.6 _reflns.pdbx_Rmerge_I_obs 0.105 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 40.2 _reflns.B_iso_Wilson_estimate 19.2 _reflns.pdbx_redundancy 9.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.65 _reflns_shell.d_res_low 1.68 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 85.6 _reflns_shell.Rmerge_I_obs 0.361 _reflns_shell.meanI_over_sigI_obs 3.88 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 5.7 _reflns_shell.number_unique_all 1134 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3O6P _refine.ls_d_res_high 1.6500 _refine.ls_d_res_low 44.4700 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.6200 _refine.ls_number_reflns_obs 26442 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED' _refine.ls_R_factor_all 0.1516 _refine.ls_R_factor_obs 0.1516 _refine.ls_R_factor_R_work 0.1491 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1996 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 1333 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 22.3347 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.4400 _refine.aniso_B[2][2] 1.5100 _refine.aniso_B[3][3] -1.0700 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9650 _refine.correlation_coeff_Fo_to_Fc_free 0.9490 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R_Free 0.1010 _refine.overall_SU_ML 0.0610 _refine.overall_SU_B 3.8890 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 105.670 _refine.B_iso_min 8.140 _refine.occupancy_max 1.000 _refine.occupancy_min 0.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1750 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 305 _refine_hist.number_atoms_total 2056 _refine_hist.d_res_high 1.6500 _refine_hist.d_res_low 44.4700 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2018 0.012 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2752 1.283 1.961 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 274 5.426 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 98 39.004 25.306 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 362 11.329 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 13 19.205 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 285 0.099 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1617 0.006 0.021 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1281 1.329 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2080 2.280 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 737 3.325 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 672 5.149 4.500 ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 2018 1.506 3.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.6500 _refine_ls_shell.d_res_low 1.6930 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 86.4500 _refine_ls_shell.number_reflns_R_work 1606 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.1740 _refine_ls_shell.R_factor_R_free 0.1970 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 79 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1685 _refine_ls_shell.number_reflns_obs 1685 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3O6P _struct.title 'Crystal structure of peptide ABC transporter, peptide-binding protein' _struct.pdbx_descriptor 'Peptide ABC transporter, peptide-binding protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3O6P _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text ;Structural Genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, ABC transporter, PROTEIN BINDING ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 18 ? ARG A 21 ? SER A 315 ARG A 318 5 ? 4 HELX_P HELX_P2 2 ASN A 22 ? SER A 32 ? ASN A 319 SER A 329 1 ? 11 HELX_P HELX_P3 3 ASP A 34 ? SER A 41 ? ASP A 331 SER A 338 1 ? 8 HELX_P HELX_P4 4 ASP A 67 ? GLY A 73 ? ASP A 364 GLY A 370 1 ? 7 HELX_P HELX_P5 5 ASP A 79 ? GLY A 95 ? ASP A 376 GLY A 392 1 ? 17 HELX_P HELX_P6 6 ALA A 108 ? LEU A 126 ? ALA A 405 LEU A 423 1 ? 19 HELX_P HELX_P7 7 PRO A 137 ? GLY A 148 ? PRO A 434 GLY A 445 1 ? 12 HELX_P HELX_P8 8 PRO A 164 ? ASP A 169 ? PRO A 461 ASP A 466 1 ? 6 HELX_P HELX_P9 9 LEU A 170 ? ALA A 172 ? LEU A 467 ALA A 469 5 ? 3 HELX_P HELX_P10 10 ASN A 184 ? SER A 196 ? ASN A 481 SER A 493 1 ? 13 HELX_P HELX_P11 11 ASP A 201 ? ASP A 219 ? ASP A 498 ASP A 516 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A TYR 8 C ? ? ? 1_555 A MSE 9 N ? ? A TYR 305 A MSE 306 1_555 ? ? ? ? ? ? ? 1.332 ? covale2 covale ? ? A MSE 9 C ? ? ? 1_555 A GLU 10 N ? ? A MSE 306 A GLU 307 1_555 ? ? ? ? ? ? ? 1.328 ? covale3 covale ? ? A ASP 57 C ? ? ? 1_555 A MSE 58 N ? ? A ASP 354 A MSE 355 1_555 ? ? ? ? ? ? ? 1.330 ? covale4 covale ? ? A MSE 58 C ? ? ? 1_555 A ALA 59 N ? ? A MSE 355 A ALA 356 1_555 ? ? ? ? ? ? ? 1.332 ? covale5 covale ? ? A THR 100 C ? ? ? 1_555 A MSE 101 N ? ? A THR 397 A MSE 398 1_555 ? ? ? ? ? ? ? 1.327 ? covale6 covale ? ? A MSE 101 C ? ? ? 1_555 A ASP 102 N ? ? A MSE 398 A ASP 399 1_555 ? ? ? ? ? ? ? 1.328 ? covale7 covale ? ? A ASP 208 C ? ? ? 1_555 A MSE 209 N ? ? A ASP 505 A MSE 506 1_555 ? ? ? ? ? ? ? 1.329 ? covale8 covale ? ? A MSE 209 C ? ? ? 1_555 A LEU 210 N ? ? A MSE 506 A LEU 507 1_555 ? ? ? ? ? ? ? 1.341 ? covale9 covale ? ? A ILE 216 C ? ? ? 1_555 A MSE 217 N ? ? A ILE 513 A MSE 514 1_555 ? ? ? ? ? ? ? 1.339 ? covale10 covale ? ? A MSE 217 C ? ? ? 1_555 A GLY 218 N ? ? A MSE 514 A GLY 515 1_555 ? ? ? ? ? ? ? 1.340 ? covale11 covale ? ? A ASP 219 C ? ? ? 1_555 A MSE 220 N ? ? A ASP 516 A MSE 517 1_555 ? ? ? ? ? ? ? 1.341 ? covale12 covale ? ? A MSE 220 C ? ? ? 1_555 A GLY 221 N ? ? A MSE 517 A GLY 518 1_555 ? ? ? ? ? ? ? 1.328 ? metalc1 metalc ? ? A GLN 123 O B ? ? 1_555 B NA . NA ? ? A GLN 420 A NA 601 1_555 ? ? ? ? ? ? ? 2.268 ? metalc2 metalc ? ? A GLN 123 O A ? ? 1_555 B NA . NA ? ? A GLN 420 A NA 601 1_555 ? ? ? ? ? ? ? 2.284 ? metalc3 metalc ? ? B NA . NA ? ? ? 1_555 C HOH . O ? ? A NA 601 A HOH 78 1_555 ? ? ? ? ? ? ? 2.391 ? metalc4 metalc ? ? A LEU 126 O ? ? ? 1_555 B NA . NA ? ? A LEU 423 A NA 601 1_555 ? ? ? ? ? ? ? 2.481 ? metalc5 metalc ? ? B NA . NA ? ? ? 1_555 C HOH . O ? ? A NA 601 A HOH 228 1_555 ? ? ? ? ? ? ? 2.522 ? metalc6 metalc ? ? B NA . NA ? ? ? 1_555 C HOH . O ? ? A NA 601 A HOH 21 1_555 ? ? ? ? ? ? ? 2.552 ? metalc7 metalc ? ? A VAL 129 O ? ? ? 1_555 B NA . NA ? ? A VAL 426 A NA 601 1_555 ? ? ? ? ? ? ? 2.663 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 129 ? VAL A 136 ? VAL A 426 VAL A 433 A 2 LEU A 99 ? SER A 106 ? LEU A 396 SER A 403 A 3 ALA A 152 ? SER A 158 ? ALA A 449 SER A 455 A 4 SER A 5 ? LEU A 11 ? SER A 302 LEU A 308 A 5 VAL A 223 ? LYS A 228 ? VAL A 520 LYS A 525 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O SER A 134 ? O SER A 431 N ILE A 103 ? N ILE A 400 A 2 3 N LEU A 104 ? N LEU A 401 O ALA A 152 ? O ALA A 449 A 3 4 O VAL A 153 ? O VAL A 450 N GLU A 10 ? N GLU A 307 A 4 5 N GLN A 7 ? N GLN A 304 O LEU A 225 ? O LEU A 522 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'BINDING SITE FOR RESIDUE NA A 601' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HOH C . ? HOH A 21 . ? 1_555 ? 2 AC1 6 HOH C . ? HOH A 78 . ? 1_555 ? 3 AC1 6 HOH C . ? HOH A 228 . ? 1_555 ? 4 AC1 6 GLN A 123 ? GLN A 420 . ? 1_555 ? 5 AC1 6 LEU A 126 ? LEU A 423 . ? 1_555 ? 6 AC1 6 VAL A 129 ? VAL A 426 . ? 1_555 ? # _atom_sites.entry_id 3O6P _atom_sites.fract_transf_matrix[1][1] 0.019711 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018638 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012579 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N NA O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 298 ? ? ? A . n A 1 2 ASN 2 299 ? ? ? A . n A 1 3 ALA 3 300 300 ALA ALA A . n A 1 4 ALA 4 301 301 ALA ALA A . n A 1 5 SER 5 302 302 SER SER A . n A 1 6 THR 6 303 303 THR THR A . n A 1 7 GLN 7 304 304 GLN GLN A . n A 1 8 TYR 8 305 305 TYR TYR A . n A 1 9 MSE 9 306 306 MSE MSE A . n A 1 10 GLU 10 307 307 GLU GLU A . n A 1 11 LEU 11 308 308 LEU LEU A . n A 1 12 ASN 12 309 309 ASN ASN A . n A 1 13 GLN 13 310 310 GLN GLN A . n A 1 14 ARG 14 311 311 ARG ARG A . n A 1 15 ASP 15 312 312 ASP ASP A . n A 1 16 GLU 16 313 313 GLU GLU A . n A 1 17 LYS 17 314 314 LYS LYS A . n A 1 18 SER 18 315 315 SER SER A . n A 1 19 PRO 19 316 316 PRO PRO A . n A 1 20 PHE 20 317 317 PHE PHE A . n A 1 21 ARG 21 318 318 ARG ARG A . n A 1 22 ASN 22 319 319 ASN ASN A . n A 1 23 ALA 23 320 320 ALA ALA A . n A 1 24 ASN 24 321 321 ASN ASN A . n A 1 25 LEU 25 322 322 LEU LEU A . n A 1 26 ARG 26 323 323 ARG ARG A . n A 1 27 LYS 27 324 324 LYS LYS A . n A 1 28 ALA 28 325 325 ALA ALA A . n A 1 29 ILE 29 326 326 ILE ILE A . n A 1 30 SER 30 327 327 SER SER A . n A 1 31 TYR 31 328 328 TYR TYR A . n A 1 32 SER 32 329 329 SER SER A . n A 1 33 ILE 33 330 330 ILE ILE A . n A 1 34 ASP 34 331 331 ASP ASP A . n A 1 35 ARG 35 332 332 ARG ARG A . n A 1 36 LYS 36 333 333 LYS LYS A . n A 1 37 ALA 37 334 334 ALA ALA A . n A 1 38 LEU 38 335 335 LEU LEU A . n A 1 39 VAL 39 336 336 VAL VAL A . n A 1 40 GLU 40 337 337 GLU GLU A . n A 1 41 SER 41 338 338 SER SER A . n A 1 42 ILE 42 339 339 ILE ILE A . n A 1 43 LEU 43 340 340 LEU LEU A . n A 1 44 GLY 44 341 341 GLY GLY A . n A 1 45 ASP 45 342 342 ASP ASP A . n A 1 46 GLY 46 343 343 GLY GLY A . n A 1 47 SER 47 344 344 SER SER A . n A 1 48 ILE 48 345 345 ILE ILE A . n A 1 49 GLU 49 346 346 GLU GLU A . n A 1 50 PRO 50 347 347 PRO PRO A . n A 1 51 ASN 51 348 348 ASN ASN A . n A 1 52 GLY 52 349 349 GLY GLY A . n A 1 53 LEU 53 350 350 LEU LEU A . n A 1 54 VAL 54 351 351 VAL VAL A . n A 1 55 PRO 55 352 352 PRO PRO A . n A 1 56 ALA 56 353 353 ALA ALA A . n A 1 57 ASP 57 354 354 ASP ASP A . n A 1 58 MSE 58 355 355 MSE MSE A . n A 1 59 ALA 59 356 356 ALA ALA A . n A 1 60 LYS 60 357 357 LYS LYS A . n A 1 61 ASP 61 358 358 ASP ASP A . n A 1 62 PRO 62 359 359 PRO PRO A . n A 1 63 SER 63 360 360 SER SER A . n A 1 64 GLY 64 361 361 GLY GLY A . n A 1 65 GLY 65 362 362 GLY GLY A . n A 1 66 LYS 66 363 363 LYS LYS A . n A 1 67 ASP 67 364 364 ASP ASP A . n A 1 68 PHE 68 365 365 PHE PHE A . n A 1 69 ALA 69 366 366 ALA ALA A . n A 1 70 LYS 70 367 367 LYS LYS A . n A 1 71 GLU 71 368 368 GLU GLU A . n A 1 72 ALA 72 369 369 ALA ALA A . n A 1 73 GLY 73 370 370 GLY GLY A . n A 1 74 SER 74 371 371 SER SER A . n A 1 75 GLN 75 372 372 GLN GLN A . n A 1 76 ILE 76 373 373 ILE ILE A . n A 1 77 GLU 77 374 374 GLU GLU A . n A 1 78 TYR 78 375 375 TYR TYR A . n A 1 79 ASP 79 376 376 ASP ASP A . n A 1 80 THR 80 377 377 THR THR A . n A 1 81 LYS 81 378 378 LYS LYS A . n A 1 82 LYS 82 379 379 LYS LYS A . n A 1 83 ALA 83 380 380 ALA ALA A . n A 1 84 LYS 84 381 381 LYS LYS A . n A 1 85 GLU 85 382 382 GLU GLU A . n A 1 86 TYR 86 383 383 TYR TYR A . n A 1 87 TRP 87 384 384 TRP TRP A . n A 1 88 GLU 88 385 385 GLU GLU A . n A 1 89 LYS 89 386 386 LYS LYS A . n A 1 90 ALA 90 387 387 ALA ALA A . n A 1 91 LYS 91 388 388 LYS LYS A . n A 1 92 LYS 92 389 389 LYS LYS A . n A 1 93 GLU 93 390 390 GLU GLU A . n A 1 94 LEU 94 391 391 LEU LEU A . n A 1 95 GLY 95 392 392 GLY GLY A . n A 1 96 ILE 96 393 393 ILE ILE A . n A 1 97 SER 97 394 394 SER SER A . n A 1 98 THR 98 395 395 THR THR A . n A 1 99 LEU 99 396 396 LEU LEU A . n A 1 100 THR 100 397 397 THR THR A . n A 1 101 MSE 101 398 398 MSE MSE A . n A 1 102 ASP 102 399 399 ASP ASP A . n A 1 103 ILE 103 400 400 ILE ILE A . n A 1 104 LEU 104 401 401 LEU LEU A . n A 1 105 SER 105 402 402 SER SER A . n A 1 106 SER 106 403 403 SER SER A . n A 1 107 ASP 107 404 404 ASP ASP A . n A 1 108 ALA 108 405 405 ALA ALA A . n A 1 109 ASP 109 406 406 ASP ASP A . n A 1 110 SER 110 407 407 SER SER A . n A 1 111 SER 111 408 408 SER SER A . n A 1 112 LYS 112 409 409 LYS LYS A . n A 1 113 LYS 113 410 410 LYS LYS A . n A 1 114 THR 114 411 411 THR THR A . n A 1 115 VAL 115 412 412 VAL VAL A . n A 1 116 GLU 116 413 413 GLU GLU A . n A 1 117 PHE 117 414 414 PHE PHE A . n A 1 118 VAL 118 415 415 VAL VAL A . n A 1 119 GLN 119 416 416 GLN GLN A . n A 1 120 GLY 120 417 417 GLY GLY A . n A 1 121 SER 121 418 418 SER SER A . n A 1 122 ILE 122 419 419 ILE ILE A . n A 1 123 GLN 123 420 420 GLN GLN A . n A 1 124 ASP 124 421 421 ASP ASP A . n A 1 125 ALA 125 422 422 ALA ALA A . n A 1 126 LEU 126 423 423 LEU LEU A . n A 1 127 ASP 127 424 424 ASP ASP A . n A 1 128 GLY 128 425 425 GLY GLY A . n A 1 129 VAL 129 426 426 VAL VAL A . n A 1 130 LYS 130 427 427 LYS LYS A . n A 1 131 VAL 131 428 428 VAL VAL A . n A 1 132 THR 132 429 429 THR THR A . n A 1 133 VAL 133 430 430 VAL VAL A . n A 1 134 SER 134 431 431 SER SER A . n A 1 135 PRO 135 432 432 PRO PRO A . n A 1 136 VAL 136 433 433 VAL VAL A . n A 1 137 PRO 137 434 434 PRO PRO A . n A 1 138 PHE 138 435 435 PHE PHE A . n A 1 139 SER 139 436 436 SER SER A . n A 1 140 VAL 140 437 437 VAL VAL A . n A 1 141 ARG 141 438 438 ARG ARG A . n A 1 142 LEU 142 439 439 LEU LEU A . n A 1 143 ASP 143 440 440 ASP ASP A . n A 1 144 ARG 144 441 441 ARG ARG A . n A 1 145 SER 145 442 442 SER SER A . n A 1 146 ASN 146 443 443 ASN ASN A . n A 1 147 LYS 147 444 444 LYS LYS A . n A 1 148 GLY 148 445 445 GLY GLY A . n A 1 149 ASP 149 446 446 ASP ASP A . n A 1 150 PHE 150 447 447 PHE PHE A . n A 1 151 ASP 151 448 448 ASP ASP A . n A 1 152 ALA 152 449 449 ALA ALA A . n A 1 153 VAL 153 450 450 VAL VAL A . n A 1 154 ILE 154 451 451 ILE ILE A . n A 1 155 GLY 155 452 452 GLY GLY A . n A 1 156 GLY 156 453 453 GLY GLY A . n A 1 157 TRP 157 454 454 TRP TRP A . n A 1 158 SER 158 455 455 SER SER A . n A 1 159 ALA 159 456 456 ALA ALA A . n A 1 160 ASP 160 457 457 ASP ASP A . n A 1 161 TYR 161 458 458 TYR TYR A . n A 1 162 ALA 162 459 459 ALA ALA A . n A 1 163 ASP 163 460 460 ASP ASP A . n A 1 164 PRO 164 461 461 PRO PRO A . n A 1 165 SER 165 462 462 SER SER A . n A 1 166 SER 166 463 463 SER SER A . n A 1 167 PHE 167 464 464 PHE PHE A . n A 1 168 LEU 168 465 465 LEU LEU A . n A 1 169 ASP 169 466 466 ASP ASP A . n A 1 170 LEU 170 467 467 LEU LEU A . n A 1 171 PHE 171 468 468 PHE PHE A . n A 1 172 ALA 172 469 469 ALA ALA A . n A 1 173 SER 173 470 470 SER SER A . n A 1 174 ASP 174 471 471 ASP ASP A . n A 1 175 ASN 175 472 472 ASN ASN A . n A 1 176 SER 176 473 473 SER SER A . n A 1 177 TYR 177 474 474 TYR TYR A . n A 1 178 ASN 178 475 475 ASN ASN A . n A 1 179 ARG 179 476 476 ARG ARG A . n A 1 180 GLY 180 477 477 GLY GLY A . n A 1 181 ARG 181 478 478 ARG ARG A . n A 1 182 TYR 182 479 479 TYR TYR A . n A 1 183 ASN 183 480 480 ASN ASN A . n A 1 184 ASN 184 481 481 ASN ASN A . n A 1 185 ALA 185 482 482 ALA ALA A . n A 1 186 GLU 186 483 483 GLU GLU A . n A 1 187 PHE 187 484 484 PHE PHE A . n A 1 188 ASP 188 485 485 ASP ASP A . n A 1 189 LYS 189 486 486 LYS LYS A . n A 1 190 PHE 190 487 487 PHE PHE A . n A 1 191 VAL 191 488 488 VAL VAL A . n A 1 192 LYS 192 489 489 LYS LYS A . n A 1 193 ALA 193 490 490 ALA ALA A . n A 1 194 ALA 194 491 491 ALA ALA A . n A 1 195 SER 195 492 492 SER SER A . n A 1 196 SER 196 493 493 SER SER A . n A 1 197 ALA 197 494 494 ALA ALA A . n A 1 198 ASP 198 495 495 ASP ASP A . n A 1 199 ALA 199 496 496 ALA ALA A . n A 1 200 THR 200 497 497 THR THR A . n A 1 201 ASP 201 498 498 ASP ASP A . n A 1 202 PRO 202 499 499 PRO PRO A . n A 1 203 GLU 203 500 500 GLU GLU A . n A 1 204 LYS 204 501 501 LYS LYS A . n A 1 205 ARG 205 502 502 ARG ARG A . n A 1 206 TRP 206 503 503 TRP TRP A . n A 1 207 ASP 207 504 504 ASP ASP A . n A 1 208 ASP 208 505 505 ASP ASP A . n A 1 209 MSE 209 506 506 MSE MSE A . n A 1 210 LEU 210 507 507 LEU LEU A . n A 1 211 ASN 211 508 508 ASN ASN A . n A 1 212 ALA 212 509 509 ALA ALA A . n A 1 213 GLU 213 510 510 GLU GLU A . n A 1 214 LYS 214 511 511 LYS LYS A . n A 1 215 THR 215 512 512 THR THR A . n A 1 216 ILE 216 513 513 ILE ILE A . n A 1 217 MSE 217 514 514 MSE MSE A . n A 1 218 GLY 218 515 515 GLY GLY A . n A 1 219 ASP 219 516 516 ASP ASP A . n A 1 220 MSE 220 517 517 MSE MSE A . n A 1 221 GLY 221 518 518 GLY GLY A . n A 1 222 VAL 222 519 519 VAL VAL A . n A 1 223 VAL 223 520 520 VAL VAL A . n A 1 224 PRO 224 521 521 PRO PRO A . n A 1 225 LEU 225 522 522 LEU LEU A . n A 1 226 PHE 226 523 523 PHE PHE A . n A 1 227 GLN 227 524 524 GLN GLN A . n A 1 228 LYS 228 525 525 LYS LYS A . n A 1 229 SER 229 526 526 SER SER A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA 1 601 601 NA NA A . C 3 HOH 1 1 1 HOH HOH A . C 3 HOH 2 2 2 HOH HOH A . C 3 HOH 3 3 3 HOH HOH A . C 3 HOH 4 4 4 HOH HOH A . C 3 HOH 5 5 5 HOH HOH A . C 3 HOH 6 6 6 HOH HOH A . C 3 HOH 7 7 7 HOH HOH A . C 3 HOH 8 8 8 HOH HOH A . C 3 HOH 9 9 9 HOH HOH A . C 3 HOH 10 10 10 HOH HOH A . C 3 HOH 11 11 11 HOH HOH A . C 3 HOH 12 12 12 HOH HOH A . C 3 HOH 13 13 13 HOH HOH A . C 3 HOH 14 14 14 HOH HOH A . C 3 HOH 15 15 15 HOH HOH A . C 3 HOH 16 16 16 HOH HOH A . C 3 HOH 17 17 17 HOH HOH A . C 3 HOH 18 18 18 HOH HOH A . C 3 HOH 19 19 19 HOH HOH A . C 3 HOH 20 20 20 HOH HOH A . C 3 HOH 21 21 21 HOH HOH A . C 3 HOH 22 22 22 HOH HOH A . C 3 HOH 23 23 23 HOH HOH A . C 3 HOH 24 24 24 HOH HOH A . C 3 HOH 25 25 25 HOH HOH A . C 3 HOH 26 26 26 HOH HOH A . C 3 HOH 27 27 27 HOH HOH A . C 3 HOH 28 28 28 HOH HOH A . C 3 HOH 29 29 29 HOH HOH A . C 3 HOH 30 30 30 HOH HOH A . C 3 HOH 31 31 31 HOH HOH A . C 3 HOH 32 32 32 HOH HOH A . C 3 HOH 33 33 33 HOH HOH A . C 3 HOH 34 34 34 HOH HOH A . C 3 HOH 35 35 35 HOH HOH A . C 3 HOH 36 36 36 HOH HOH A . C 3 HOH 37 37 37 HOH HOH A . C 3 HOH 38 38 38 HOH HOH A . C 3 HOH 39 39 39 HOH HOH A . C 3 HOH 40 40 40 HOH HOH A . C 3 HOH 41 41 41 HOH HOH A . C 3 HOH 42 42 42 HOH HOH A . C 3 HOH 43 43 43 HOH HOH A . C 3 HOH 44 44 44 HOH HOH A . C 3 HOH 45 45 45 HOH HOH A . C 3 HOH 46 46 46 HOH HOH A . C 3 HOH 47 47 47 HOH HOH A . C 3 HOH 48 48 48 HOH HOH A . C 3 HOH 49 49 49 HOH HOH A . C 3 HOH 50 50 50 HOH HOH A . C 3 HOH 51 51 51 HOH HOH A . C 3 HOH 52 52 52 HOH HOH A . C 3 HOH 53 53 53 HOH HOH A . C 3 HOH 54 54 54 HOH HOH A . C 3 HOH 55 55 55 HOH HOH A . C 3 HOH 56 56 56 HOH HOH A . C 3 HOH 57 57 57 HOH HOH A . C 3 HOH 58 58 58 HOH HOH A . C 3 HOH 59 59 59 HOH HOH A . C 3 HOH 60 60 60 HOH HOH A . C 3 HOH 61 61 61 HOH HOH A . C 3 HOH 62 62 62 HOH HOH A . C 3 HOH 63 63 63 HOH HOH A . C 3 HOH 64 64 64 HOH HOH A . C 3 HOH 65 65 65 HOH HOH A . C 3 HOH 66 66 66 HOH HOH A . C 3 HOH 67 67 67 HOH HOH A . C 3 HOH 68 68 68 HOH HOH A . C 3 HOH 69 69 69 HOH HOH A . C 3 HOH 70 70 70 HOH HOH A . C 3 HOH 71 71 71 HOH HOH A . C 3 HOH 72 72 72 HOH HOH A . C 3 HOH 73 73 73 HOH HOH A . C 3 HOH 74 74 74 HOH HOH A . C 3 HOH 75 75 75 HOH HOH A . C 3 HOH 76 76 76 HOH HOH A . C 3 HOH 77 77 77 HOH HOH A . C 3 HOH 78 78 78 HOH HOH A . C 3 HOH 79 79 79 HOH HOH A . C 3 HOH 80 80 80 HOH HOH A . C 3 HOH 81 81 81 HOH HOH A . C 3 HOH 82 82 82 HOH HOH A . C 3 HOH 83 83 83 HOH HOH A . C 3 HOH 84 84 84 HOH HOH A . C 3 HOH 85 85 85 HOH HOH A . C 3 HOH 86 86 86 HOH HOH A . C 3 HOH 87 87 87 HOH HOH A . C 3 HOH 88 88 88 HOH HOH A . C 3 HOH 89 89 89 HOH HOH A . C 3 HOH 90 90 90 HOH HOH A . C 3 HOH 91 91 91 HOH HOH A . C 3 HOH 92 92 92 HOH HOH A . C 3 HOH 93 93 93 HOH HOH A . C 3 HOH 94 94 94 HOH HOH A . C 3 HOH 95 95 95 HOH HOH A . C 3 HOH 96 96 96 HOH HOH A . C 3 HOH 97 97 97 HOH HOH A . C 3 HOH 98 98 98 HOH HOH A . C 3 HOH 99 99 99 HOH HOH A . C 3 HOH 100 100 100 HOH HOH A . C 3 HOH 101 101 101 HOH HOH A . C 3 HOH 102 102 102 HOH HOH A . C 3 HOH 103 103 103 HOH HOH A . C 3 HOH 104 104 104 HOH HOH A . C 3 HOH 105 105 105 HOH HOH A . C 3 HOH 106 106 106 HOH HOH A . C 3 HOH 107 107 107 HOH HOH A . C 3 HOH 108 108 108 HOH HOH A . C 3 HOH 109 109 109 HOH HOH A . C 3 HOH 110 110 110 HOH HOH A . C 3 HOH 111 111 111 HOH HOH A . C 3 HOH 112 112 112 HOH HOH A . C 3 HOH 113 113 113 HOH HOH A . C 3 HOH 114 114 114 HOH HOH A . C 3 HOH 115 115 115 HOH HOH A . C 3 HOH 116 116 116 HOH HOH A . C 3 HOH 117 117 117 HOH HOH A . C 3 HOH 118 118 118 HOH HOH A . C 3 HOH 119 119 119 HOH HOH A . C 3 HOH 120 120 120 HOH HOH A . C 3 HOH 121 121 121 HOH HOH A . C 3 HOH 122 122 122 HOH HOH A . C 3 HOH 123 123 123 HOH HOH A . C 3 HOH 124 124 124 HOH HOH A . C 3 HOH 125 125 125 HOH HOH A . C 3 HOH 126 126 126 HOH HOH A . C 3 HOH 127 127 127 HOH HOH A . C 3 HOH 128 128 128 HOH HOH A . C 3 HOH 129 129 129 HOH HOH A . C 3 HOH 130 130 130 HOH HOH A . C 3 HOH 131 131 131 HOH HOH A . C 3 HOH 132 132 132 HOH HOH A . C 3 HOH 133 133 133 HOH HOH A . C 3 HOH 134 134 134 HOH HOH A . C 3 HOH 135 135 135 HOH HOH A . C 3 HOH 136 136 136 HOH HOH A . C 3 HOH 137 137 137 HOH HOH A . C 3 HOH 138 138 138 HOH HOH A . C 3 HOH 139 139 139 HOH HOH A . C 3 HOH 140 140 140 HOH HOH A . C 3 HOH 141 141 141 HOH HOH A . C 3 HOH 142 142 142 HOH HOH A . C 3 HOH 143 143 143 HOH HOH A . C 3 HOH 144 144 144 HOH HOH A . C 3 HOH 145 145 145 HOH HOH A . C 3 HOH 146 146 146 HOH HOH A . C 3 HOH 147 147 147 HOH HOH A . C 3 HOH 148 148 148 HOH HOH A . C 3 HOH 149 149 149 HOH HOH A . C 3 HOH 150 150 150 HOH HOH A . C 3 HOH 151 151 151 HOH HOH A . C 3 HOH 152 152 152 HOH HOH A . C 3 HOH 153 153 153 HOH HOH A . C 3 HOH 154 154 154 HOH HOH A . C 3 HOH 155 155 155 HOH HOH A . C 3 HOH 156 156 156 HOH HOH A . C 3 HOH 157 157 157 HOH HOH A . C 3 HOH 158 158 158 HOH HOH A . C 3 HOH 159 159 159 HOH HOH A . C 3 HOH 160 160 160 HOH HOH A . C 3 HOH 161 161 161 HOH HOH A . C 3 HOH 162 162 162 HOH HOH A . C 3 HOH 163 163 163 HOH HOH A . C 3 HOH 164 164 164 HOH HOH A . C 3 HOH 165 165 165 HOH HOH A . C 3 HOH 166 166 166 HOH HOH A . C 3 HOH 167 167 167 HOH HOH A . C 3 HOH 168 168 168 HOH HOH A . C 3 HOH 169 169 169 HOH HOH A . C 3 HOH 170 170 170 HOH HOH A . C 3 HOH 171 171 171 HOH HOH A . C 3 HOH 172 172 172 HOH HOH A . C 3 HOH 173 173 173 HOH HOH A . C 3 HOH 174 174 174 HOH HOH A . C 3 HOH 175 175 175 HOH HOH A . C 3 HOH 176 176 176 HOH HOH A . C 3 HOH 177 177 177 HOH HOH A . C 3 HOH 178 178 178 HOH HOH A . C 3 HOH 179 179 179 HOH HOH A . C 3 HOH 180 180 180 HOH HOH A . C 3 HOH 181 181 181 HOH HOH A . C 3 HOH 182 182 182 HOH HOH A . C 3 HOH 183 183 183 HOH HOH A . C 3 HOH 184 184 184 HOH HOH A . C 3 HOH 185 185 185 HOH HOH A . C 3 HOH 186 186 186 HOH HOH A . C 3 HOH 187 187 187 HOH HOH A . C 3 HOH 188 188 188 HOH HOH A . C 3 HOH 189 189 189 HOH HOH A . C 3 HOH 190 190 190 HOH HOH A . C 3 HOH 191 191 191 HOH HOH A . C 3 HOH 192 192 192 HOH HOH A . C 3 HOH 193 193 193 HOH HOH A . C 3 HOH 194 194 194 HOH HOH A . C 3 HOH 195 195 195 HOH HOH A . C 3 HOH 196 196 196 HOH HOH A . C 3 HOH 197 197 197 HOH HOH A . C 3 HOH 198 198 198 HOH HOH A . C 3 HOH 199 199 199 HOH HOH A . C 3 HOH 200 200 200 HOH HOH A . C 3 HOH 201 201 201 HOH HOH A . C 3 HOH 202 202 202 HOH HOH A . C 3 HOH 203 203 203 HOH HOH A . C 3 HOH 204 204 204 HOH HOH A . C 3 HOH 205 205 205 HOH HOH A . C 3 HOH 206 206 206 HOH HOH A . C 3 HOH 207 207 207 HOH HOH A . C 3 HOH 208 208 208 HOH HOH A . C 3 HOH 209 209 209 HOH HOH A . C 3 HOH 210 210 210 HOH HOH A . C 3 HOH 211 211 211 HOH HOH A . C 3 HOH 212 212 212 HOH HOH A . C 3 HOH 213 213 213 HOH HOH A . C 3 HOH 214 214 214 HOH HOH A . C 3 HOH 215 215 215 HOH HOH A . C 3 HOH 216 216 216 HOH HOH A . C 3 HOH 217 217 217 HOH HOH A . C 3 HOH 218 218 218 HOH HOH A . C 3 HOH 219 219 219 HOH HOH A . C 3 HOH 220 220 220 HOH HOH A . C 3 HOH 221 221 221 HOH HOH A . C 3 HOH 222 222 222 HOH HOH A . C 3 HOH 223 223 223 HOH HOH A . C 3 HOH 224 224 224 HOH HOH A . C 3 HOH 225 225 225 HOH HOH A . C 3 HOH 226 226 226 HOH HOH A . C 3 HOH 227 227 227 HOH HOH A . C 3 HOH 228 228 228 HOH HOH A . C 3 HOH 229 229 229 HOH HOH A . C 3 HOH 230 230 230 HOH HOH A . C 3 HOH 231 231 231 HOH HOH A . C 3 HOH 232 232 232 HOH HOH A . C 3 HOH 233 233 233 HOH HOH A . C 3 HOH 234 234 234 HOH HOH A . C 3 HOH 235 235 235 HOH HOH A . C 3 HOH 236 236 236 HOH HOH A . C 3 HOH 237 237 237 HOH HOH A . C 3 HOH 238 238 238 HOH HOH A . C 3 HOH 239 239 239 HOH HOH A . C 3 HOH 240 240 240 HOH HOH A . C 3 HOH 241 241 241 HOH HOH A . C 3 HOH 242 242 242 HOH HOH A . C 3 HOH 243 243 243 HOH HOH A . C 3 HOH 244 244 244 HOH HOH A . C 3 HOH 245 245 245 HOH HOH A . C 3 HOH 246 246 246 HOH HOH A . C 3 HOH 247 247 247 HOH HOH A . C 3 HOH 248 248 248 HOH HOH A . C 3 HOH 249 249 249 HOH HOH A . C 3 HOH 250 250 250 HOH HOH A . C 3 HOH 251 251 251 HOH HOH A . C 3 HOH 252 252 252 HOH HOH A . C 3 HOH 253 253 253 HOH HOH A . C 3 HOH 254 254 254 HOH HOH A . C 3 HOH 255 255 255 HOH HOH A . C 3 HOH 256 256 256 HOH HOH A . C 3 HOH 257 257 257 HOH HOH A . C 3 HOH 258 258 258 HOH HOH A . C 3 HOH 259 259 259 HOH HOH A . C 3 HOH 260 260 260 HOH HOH A . C 3 HOH 261 261 261 HOH HOH A . C 3 HOH 262 262 262 HOH HOH A . C 3 HOH 263 263 263 HOH HOH A . C 3 HOH 264 264 264 HOH HOH A . C 3 HOH 265 265 265 HOH HOH A . C 3 HOH 266 266 266 HOH HOH A . C 3 HOH 267 267 267 HOH HOH A . C 3 HOH 268 268 268 HOH HOH A . C 3 HOH 269 269 269 HOH HOH A . C 3 HOH 270 270 270 HOH HOH A . C 3 HOH 271 271 271 HOH HOH A . C 3 HOH 272 272 272 HOH HOH A . C 3 HOH 273 273 273 HOH HOH A . C 3 HOH 274 274 274 HOH HOH A . C 3 HOH 275 275 275 HOH HOH A . C 3 HOH 276 276 276 HOH HOH A . C 3 HOH 277 277 277 HOH HOH A . C 3 HOH 278 278 278 HOH HOH A . C 3 HOH 279 279 279 HOH HOH A . C 3 HOH 280 280 280 HOH HOH A . C 3 HOH 281 281 281 HOH HOH A . C 3 HOH 282 282 282 HOH HOH A . C 3 HOH 283 283 283 HOH HOH A . C 3 HOH 284 284 284 HOH HOH A . C 3 HOH 285 285 285 HOH HOH A . C 3 HOH 286 286 286 HOH HOH A . C 3 HOH 287 287 287 HOH HOH A . C 3 HOH 288 288 288 HOH HOH A . C 3 HOH 289 289 289 HOH HOH A . C 3 HOH 290 290 290 HOH HOH A . C 3 HOH 291 291 291 HOH HOH A . C 3 HOH 292 292 292 HOH HOH A . C 3 HOH 293 293 293 HOH HOH A . C 3 HOH 294 294 294 HOH HOH A . C 3 HOH 295 295 295 HOH HOH A . C 3 HOH 296 296 296 HOH HOH A . C 3 HOH 297 527 297 HOH HOH A . C 3 HOH 298 528 298 HOH HOH A . C 3 HOH 299 529 299 HOH HOH A . C 3 HOH 300 530 300 HOH HOH A . C 3 HOH 301 531 301 HOH HOH A . C 3 HOH 302 532 302 HOH HOH A . C 3 HOH 303 533 303 HOH HOH A . C 3 HOH 304 534 304 HOH HOH A . C 3 HOH 305 535 305 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 9 A MSE 306 ? MET SELENOMETHIONINE 2 A MSE 58 A MSE 355 ? MET SELENOMETHIONINE 3 A MSE 101 A MSE 398 ? MET SELENOMETHIONINE 4 A MSE 209 A MSE 506 ? MET SELENOMETHIONINE 5 A MSE 217 A MSE 514 ? MET SELENOMETHIONINE 6 A MSE 220 A MSE 517 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O B A GLN 123 ? A GLN 420 ? 1_555 NA ? B NA . ? A NA 601 ? 1_555 O A A GLN 123 ? A GLN 420 ? 1_555 4.1 ? 2 O B A GLN 123 ? A GLN 420 ? 1_555 NA ? B NA . ? A NA 601 ? 1_555 O ? C HOH . ? A HOH 78 ? 1_555 157.5 ? 3 O A A GLN 123 ? A GLN 420 ? 1_555 NA ? B NA . ? A NA 601 ? 1_555 O ? C HOH . ? A HOH 78 ? 1_555 161.2 ? 4 O B A GLN 123 ? A GLN 420 ? 1_555 NA ? B NA . ? A NA 601 ? 1_555 O ? A LEU 126 ? A LEU 423 ? 1_555 95.5 ? 5 O A A GLN 123 ? A GLN 420 ? 1_555 NA ? B NA . ? A NA 601 ? 1_555 O ? A LEU 126 ? A LEU 423 ? 1_555 91.6 ? 6 O ? C HOH . ? A HOH 78 ? 1_555 NA ? B NA . ? A NA 601 ? 1_555 O ? A LEU 126 ? A LEU 423 ? 1_555 99.8 ? 7 O B A GLN 123 ? A GLN 420 ? 1_555 NA ? B NA . ? A NA 601 ? 1_555 O ? C HOH . ? A HOH 228 ? 1_555 81.1 ? 8 O A A GLN 123 ? A GLN 420 ? 1_555 NA ? B NA . ? A NA 601 ? 1_555 O ? C HOH . ? A HOH 228 ? 1_555 85.2 ? 9 O ? C HOH . ? A HOH 78 ? 1_555 NA ? B NA . ? A NA 601 ? 1_555 O ? C HOH . ? A HOH 228 ? 1_555 80.4 ? 10 O ? A LEU 126 ? A LEU 423 ? 1_555 NA ? B NA . ? A NA 601 ? 1_555 O ? C HOH . ? A HOH 228 ? 1_555 167.3 ? 11 O B A GLN 123 ? A GLN 420 ? 1_555 NA ? B NA . ? A NA 601 ? 1_555 O ? C HOH . ? A HOH 21 ? 1_555 74.0 ? 12 O A A GLN 123 ? A GLN 420 ? 1_555 NA ? B NA . ? A NA 601 ? 1_555 O ? C HOH . ? A HOH 21 ? 1_555 75.0 ? 13 O ? C HOH . ? A HOH 78 ? 1_555 NA ? B NA . ? A NA 601 ? 1_555 O ? C HOH . ? A HOH 21 ? 1_555 91.4 ? 14 O ? A LEU 126 ? A LEU 423 ? 1_555 NA ? B NA . ? A NA 601 ? 1_555 O ? C HOH . ? A HOH 21 ? 1_555 83.5 ? 15 O ? C HOH . ? A HOH 228 ? 1_555 NA ? B NA . ? A NA 601 ? 1_555 O ? C HOH . ? A HOH 21 ? 1_555 83.8 ? 16 O B A GLN 123 ? A GLN 420 ? 1_555 NA ? B NA . ? A NA 601 ? 1_555 O ? A VAL 129 ? A VAL 426 ? 1_555 103.7 ? 17 O A A GLN 123 ? A GLN 420 ? 1_555 NA ? B NA . ? A NA 601 ? 1_555 O ? A VAL 129 ? A VAL 426 ? 1_555 102.4 ? 18 O ? C HOH . ? A HOH 78 ? 1_555 NA ? B NA . ? A NA 601 ? 1_555 O ? A VAL 129 ? A VAL 426 ? 1_555 91.8 ? 19 O ? A LEU 126 ? A LEU 423 ? 1_555 NA ? B NA . ? A NA 601 ? 1_555 O ? A VAL 129 ? A VAL 426 ? 1_555 93.5 ? 20 O ? C HOH . ? A HOH 228 ? 1_555 NA ? B NA . ? A NA 601 ? 1_555 O ? A VAL 129 ? A VAL 426 ? 1_555 99.1 ? 21 O ? C HOH . ? A HOH 21 ? 1_555 NA ? B NA . ? A NA 601 ? 1_555 O ? A VAL 129 ? A VAL 426 ? 1_555 176.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-09-22 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_unobs_or_zero_occ_atoms 2 3 'Structure model' software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 43.0590 18.2157 12.3793 0.0400 0.0102 0.0307 0.0002 -0.0009 -0.0001 0.0225 0.0414 0.0660 -0.0101 -0.0040 0.0071 -0.0019 0.0023 -0.0005 0.0008 -0.0004 0.0005 0.0017 0.0015 0.0011 'X-RAY DIFFRACTION' 2 ? refined 27.5074 26.1634 13.2511 0.0369 0.0222 0.0402 0.0093 0.0067 0.0016 0.1175 2.4078 1.3526 0.4202 0.2860 0.2582 -0.0128 -0.0007 0.0135 -0.0262 0.0339 0.2064 0.0431 -0.0825 -0.1471 'X-RAY DIFFRACTION' 3 ? refined 50.3524 15.7206 11.9304 0.0397 0.0098 0.0307 -0.0001 -0.0002 0.0005 0.0287 0.0923 0.0490 0.0190 0.0098 0.0454 0.0008 0.0009 -0.0017 -0.0007 -0.0015 -0.0066 0.0016 0.0012 0.0029 'X-RAY DIFFRACTION' 4 ? refined 35.2562 32.8701 3.5447 0.0434 0.0052 0.0321 -0.0004 -0.0006 -0.0023 0.8715 0.3947 0.2088 -0.1240 -0.0554 -0.2702 0.0026 0.0078 -0.0104 -0.0007 0.0819 -0.0038 0.0410 -0.0275 -0.0051 'X-RAY DIFFRACTION' 5 ? refined 39.7654 22.8738 16.2313 0.0389 0.0083 0.0317 0.0017 -0.0001 0.0007 0.0465 0.1146 0.7975 0.0608 -0.1246 -0.0388 0.0085 -0.0080 -0.0005 -0.0038 -0.0018 0.0013 0.0065 -0.0309 0.0086 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 301 A 347 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 348 A 374 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 A 375 A 456 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 A 457 A 516 ? . . . . ? 'X-RAY DIFFRACTION' 5 5 A 517 A 526 ? . . . . ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 REFMAC 5.5.0109 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SBC-Collect . ? ? ? ? 'data collection' ? ? ? 4 HKL-3000 . ? ? ? ? 'data reduction' ? ? ? 5 HKL-3000 . ? ? ? ? 'data scaling' ? ? ? 6 HKL-3000 . ? ? ? ? phasing ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? 8 SHELXE . ? ? ? ? 'model building' ? ? ? 9 MLPHARE . ? ? ? ? phasing ? ? ? 10 DM . ? ? ? ? phasing ? ? ? 11 RESOLVE . ? ? ? ? phasing ? ? ? 12 Coot . ? ? ? ? 'model building' ? ? ? 13 ARP/wARP . ? ? ? ? 'model building' ? ? ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 26 ? ? O A HOH 140 ? ? 2.07 2 1 OE1 A GLU 483 ? A O A HOH 226 ? ? 2.15 3 1 O A HOH 26 ? ? O A HOH 113 ? ? 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 338 ? B -94.28 -65.63 2 1 ASP A 376 ? ? -163.20 103.60 3 1 ALA A 459 ? ? -71.94 48.40 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 298 ? A SER 1 2 1 Y 1 A ASN 299 ? A ASN 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SODIUM ION' NA 3 water HOH #