HEADER TRANSFERASE 30-JUL-10 3O76 TITLE 1.8 ANGSTROMS MOLECULAR STRUCTURE OF MOUSE LIVER GLUTATHIONE S- TITLE 2 TRANSFERASE MUTANT C47A COMPLEXED WITH S-(P-NITROBENZYL)GLUTATHIONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE P 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GST P1, GST YF-YF, GST-PIB, GST CLASS-PI, PREADIPOCYTE COMPND 5 GROWTH FACTOR; COMPND 6 EC: 2.5.1.18; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: GSTP1, GSTPIB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSFERASE(GLUTATHIONE), TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.CANALS,M.COLL REVDAT 2 06-SEP-23 3O76 1 REMARK SEQADV REVDAT 1 15-JUN-11 3O76 0 JRNL AUTH G.MCMANUS,M.COSTA,A.CANALS,M.COLL,T.J.MANTLE JRNL TITL SITE-DIRECTED MUTAGENESIS OF MOUSE GLUTATHIONE TRANSFERASE JRNL TITL 2 P1-1 UNLOCKS MASKED COOPERATIVITY, INTRODUCES A NOVEL JRNL TITL 3 MECHANISM FOR 'PING PONG' KINETIC BEHAVIOUR, AND PROVIDES JRNL TITL 4 FURTHER STRUCTURAL EVIDENCE FOR PARTICIPATION OF A WATER JRNL TITL 5 MOLECULE IN PROTON ABSTRACTION FROM GLUTATHIONE. JRNL REF FEBS J. V. 278 273 2011 JRNL REFN ISSN 1742-464X JRNL PMID 21134126 JRNL DOI 10.1111/J.1742-4658.2010.07944.X REMARK 2 REMARK 2 RESOLUTION. 1.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 39924 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.200 REMARK 3 FREE R VALUE TEST SET COUNT : 3078 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.77 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.82 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2288 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.98 REMARK 3 BIN R VALUE (WORKING SET) : 0.2520 REMARK 3 BIN FREE R VALUE SET COUNT : 185 REMARK 3 BIN FREE R VALUE : 0.3070 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3306 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 409 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.30000 REMARK 3 B22 (A**2) : 0.30000 REMARK 3 B33 (A**2) : -0.59000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.125 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.090 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.464 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3440 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4658 ; 1.142 ; 1.995 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 416 ; 4.756 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 158 ;32.430 ;24.430 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 580 ;12.555 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;16.853 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 502 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2642 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1717 ; 0.191 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2340 ; 0.305 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 358 ; 0.119 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 58 ; 0.203 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.156 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2153 ; 0.446 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3334 ; 0.671 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1482 ; 1.192 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1324 ; 1.786 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 209 REMARK 3 ORIGIN FOR THE GROUP (A): 57.1550 32.0437 96.7905 REMARK 3 T TENSOR REMARK 3 T11: -0.0449 T22: -0.0107 REMARK 3 T33: 0.0153 T12: -0.0355 REMARK 3 T13: 0.0932 T23: -0.0379 REMARK 3 L TENSOR REMARK 3 L11: 0.5664 L22: 1.3027 REMARK 3 L33: 2.1656 L12: -0.3432 REMARK 3 L13: -0.5660 L23: 0.1473 REMARK 3 S TENSOR REMARK 3 S11: -0.1166 S12: 0.1911 S13: -0.1054 REMARK 3 S21: 0.2045 S22: -0.0513 S23: 0.2496 REMARK 3 S31: 0.1504 S32: -0.4348 S33: 0.1680 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 209 REMARK 3 ORIGIN FOR THE GROUP (A): 75.1208 44.9657 108.3586 REMARK 3 T TENSOR REMARK 3 T11: 0.1194 T22: -0.0762 REMARK 3 T33: -0.0821 T12: -0.0197 REMARK 3 T13: 0.0249 T23: -0.0150 REMARK 3 L TENSOR REMARK 3 L11: 0.9304 L22: 2.0826 REMARK 3 L33: 1.0031 L12: 0.0247 REMARK 3 L13: -0.7771 L23: 0.1183 REMARK 3 S TENSOR REMARK 3 S11: 0.1361 S12: -0.1071 S13: 0.0507 REMARK 3 S21: 0.5465 S22: -0.0271 S23: 0.0092 REMARK 3 S31: -0.0448 S32: 0.2263 S33: -0.1089 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 210 A 210 REMARK 3 ORIGIN FOR THE GROUP (A): 60.7407 25.8125 108.6218 REMARK 3 T TENSOR REMARK 3 T11: 0.1369 T22: -0.0693 REMARK 3 T33: -0.0031 T12: 0.0236 REMARK 3 T13: 0.2114 T23: 0.0469 REMARK 3 L TENSOR REMARK 3 L11: 4.2986 L22: 34.1302 REMARK 3 L33: 21.9283 L12: 10.5871 REMARK 3 L13: -7.9997 L23: -27.2334 REMARK 3 S TENSOR REMARK 3 S11: -0.5354 S12: 0.5163 S13: 0.4210 REMARK 3 S21: 0.5434 S22: 1.1908 S23: 1.2506 REMARK 3 S31: 0.1972 S32: -1.1322 S33: -0.6553 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 210 B 210 REMARK 3 ORIGIN FOR THE GROUP (A): 63.4977 51.2304 110.0951 REMARK 3 T TENSOR REMARK 3 T11: 0.1868 T22: -0.1073 REMARK 3 T33: -0.0385 T12: 0.0118 REMARK 3 T13: 0.1414 T23: 0.0203 REMARK 3 L TENSOR REMARK 3 L11: 20.9923 L22: 0.8710 REMARK 3 L33: 0.7471 L12: -3.3289 REMARK 3 L13: -2.6756 L23: 0.7976 REMARK 3 S TENSOR REMARK 3 S11: 0.2067 S12: -0.6313 S13: 0.7142 REMARK 3 S21: 0.5866 S22: -0.1893 S23: -0.2926 REMARK 3 S31: -0.0385 S32: -0.2773 S33: -0.0175 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3O76 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-AUG-10. REMARK 100 THE DEPOSITION ID IS D_1000060750. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-FEB-99 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9114 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43759 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.770 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.77 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1GLQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 6000, 0.1 M SODIUM CITRATE, PH REMARK 280 4.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 116.94400 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 30.30600 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 30.30600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 175.41600 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 30.30600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 30.30600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 58.47200 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 30.30600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 30.30600 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 175.41600 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 30.30600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 30.30600 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 58.47200 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 116.94400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ILE A 35 CD1 REMARK 480 LEU A 42 CD2 REMARK 480 LYS A 190 CB REMARK 480 LYS B 29 CG CD CE NZ REMARK 480 LYS B 120 CG CD CE NZ REMARK 480 ASP B 171 OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 74 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 64 104.85 82.85 REMARK 500 ASN A 110 44.52 -147.77 REMARK 500 ALA A 141 -114.80 -111.56 REMARK 500 PRO A 167 -46.36 -28.78 REMARK 500 GLN B 64 104.77 77.83 REMARK 500 ASN B 110 34.22 -152.98 REMARK 500 ALA B 141 -120.66 -108.78 REMARK 500 ASN B 200 33.90 -93.31 REMARK 500 ASN B 206 -157.51 -96.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 GTB A 210 REMARK 615 GTB B 210 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTB A 210 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTB B 210 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1GLQ RELATED DB: PDB REMARK 900 1.8 ANGSTROMS MOLECULAR STRUCTURE OF MOUSE LIVER CLASS PI REMARK 900 GLUTATHIONE S-TRANSFERASE COMPLEXED WITH S-(P-NITROBENZYL) REMARK 900 GLUTATHIONE AND OTHER INHIBITORS DBREF 3O76 A 1 209 UNP P19157 GSTP1_MOUSE 2 210 DBREF 3O76 B 1 209 UNP P19157 GSTP1_MOUSE 2 210 SEQADV 3O76 ALA A 47 UNP P19157 CYS 48 ENGINEERED MUTATION SEQADV 3O76 ALA B 47 UNP P19157 CYS 48 ENGINEERED MUTATION SEQRES 1 A 209 PRO PRO TYR THR ILE VAL TYR PHE PRO VAL ARG GLY ARG SEQRES 2 A 209 CYS GLU ALA MET ARG MET LEU LEU ALA ASP GLN GLY GLN SEQRES 3 A 209 SER TRP LYS GLU GLU VAL VAL THR ILE ASP THR TRP MET SEQRES 4 A 209 GLN GLY LEU LEU LYS PRO THR ALA LEU TYR GLY GLN LEU SEQRES 5 A 209 PRO LYS PHE GLU ASP GLY ASP LEU THR LEU TYR GLN SER SEQRES 6 A 209 ASN ALA ILE LEU ARG HIS LEU GLY ARG SER LEU GLY LEU SEQRES 7 A 209 TYR GLY LYS ASN GLN ARG GLU ALA ALA GLN MET ASP MET SEQRES 8 A 209 VAL ASN ASP GLY VAL GLU ASP LEU ARG GLY LYS TYR VAL SEQRES 9 A 209 THR LEU ILE TYR THR ASN TYR GLU ASN GLY LYS ASN ASP SEQRES 10 A 209 TYR VAL LYS ALA LEU PRO GLY HIS LEU LYS PRO PHE GLU SEQRES 11 A 209 THR LEU LEU SER GLN ASN GLN GLY GLY LYS ALA PHE ILE SEQRES 12 A 209 VAL GLY ASP GLN ILE SER PHE ALA ASP TYR ASN LEU LEU SEQRES 13 A 209 ASP LEU LEU LEU ILE HIS GLN VAL LEU ALA PRO GLY CYS SEQRES 14 A 209 LEU ASP ASN PHE PRO LEU LEU SER ALA TYR VAL ALA ARG SEQRES 15 A 209 LEU SER ALA ARG PRO LYS ILE LYS ALA PHE LEU SER SER SEQRES 16 A 209 PRO GLU HIS VAL ASN ARG PRO ILE ASN GLY ASN GLY LYS SEQRES 17 A 209 GLN SEQRES 1 B 209 PRO PRO TYR THR ILE VAL TYR PHE PRO VAL ARG GLY ARG SEQRES 2 B 209 CYS GLU ALA MET ARG MET LEU LEU ALA ASP GLN GLY GLN SEQRES 3 B 209 SER TRP LYS GLU GLU VAL VAL THR ILE ASP THR TRP MET SEQRES 4 B 209 GLN GLY LEU LEU LYS PRO THR ALA LEU TYR GLY GLN LEU SEQRES 5 B 209 PRO LYS PHE GLU ASP GLY ASP LEU THR LEU TYR GLN SER SEQRES 6 B 209 ASN ALA ILE LEU ARG HIS LEU GLY ARG SER LEU GLY LEU SEQRES 7 B 209 TYR GLY LYS ASN GLN ARG GLU ALA ALA GLN MET ASP MET SEQRES 8 B 209 VAL ASN ASP GLY VAL GLU ASP LEU ARG GLY LYS TYR VAL SEQRES 9 B 209 THR LEU ILE TYR THR ASN TYR GLU ASN GLY LYS ASN ASP SEQRES 10 B 209 TYR VAL LYS ALA LEU PRO GLY HIS LEU LYS PRO PHE GLU SEQRES 11 B 209 THR LEU LEU SER GLN ASN GLN GLY GLY LYS ALA PHE ILE SEQRES 12 B 209 VAL GLY ASP GLN ILE SER PHE ALA ASP TYR ASN LEU LEU SEQRES 13 B 209 ASP LEU LEU LEU ILE HIS GLN VAL LEU ALA PRO GLY CYS SEQRES 14 B 209 LEU ASP ASN PHE PRO LEU LEU SER ALA TYR VAL ALA ARG SEQRES 15 B 209 LEU SER ALA ARG PRO LYS ILE LYS ALA PHE LEU SER SER SEQRES 16 B 209 PRO GLU HIS VAL ASN ARG PRO ILE ASN GLY ASN GLY LYS SEQRES 17 B 209 GLN HET GTB A 210 30 HET GTB B 210 30 HETNAM GTB S-(P-NITROBENZYL)GLUTATHIONE FORMUL 3 GTB 2(C17 H22 N4 O8 S) FORMUL 5 HOH *409(H2 O) HELIX 1 1 ARG A 11 ARG A 13 5 3 HELIX 2 2 CYS A 14 GLN A 24 1 11 HELIX 3 3 THR A 34 GLN A 40 1 7 HELIX 4 4 LEU A 43 ALA A 47 5 5 HELIX 5 5 GLN A 64 GLY A 77 1 14 HELIX 6 6 ASN A 82 ASN A 110 1 29 HELIX 7 7 ASN A 110 GLN A 135 1 26 HELIX 8 8 ASN A 136 LYS A 140 5 5 HELIX 9 9 SER A 149 ALA A 166 1 18 HELIX 10 10 PHE A 173 ARG A 186 1 14 HELIX 11 11 ARG A 186 SER A 195 1 10 HELIX 12 12 SER A 195 ASN A 200 1 6 HELIX 13 13 ARG B 11 ARG B 13 5 3 HELIX 14 14 CYS B 14 GLN B 24 1 11 HELIX 15 15 THR B 34 GLN B 40 1 7 HELIX 16 16 LEU B 43 ALA B 47 5 5 HELIX 17 17 GLN B 64 LEU B 76 1 13 HELIX 18 18 ASN B 82 ASN B 110 1 29 HELIX 19 19 ASN B 110 GLN B 135 1 26 HELIX 20 20 ASN B 136 LYS B 140 5 5 HELIX 21 21 SER B 149 ALA B 166 1 18 HELIX 22 22 PHE B 173 ALA B 185 1 13 HELIX 23 23 ARG B 186 SER B 195 1 10 HELIX 24 24 SER B 195 ASN B 200 1 6 SHEET 1 A 4 TRP A 28 VAL A 32 0 SHEET 2 A 4 TYR A 3 TYR A 7 1 N ILE A 5 O GLU A 31 SHEET 3 A 4 LYS A 54 ASP A 57 -1 O LYS A 54 N VAL A 6 SHEET 4 A 4 LEU A 60 TYR A 63 -1 O LEU A 62 N PHE A 55 SHEET 1 B 4 LYS B 29 VAL B 32 0 SHEET 2 B 4 TYR B 3 TYR B 7 1 N ILE B 5 O GLU B 31 SHEET 3 B 4 LYS B 54 ASP B 57 -1 O LYS B 54 N VAL B 6 SHEET 4 B 4 LEU B 60 TYR B 63 -1 O LEU B 62 N PHE B 55 CISPEP 1 PRO A 1 PRO A 2 0 0.19 CISPEP 2 LEU A 52 PRO A 53 0 10.20 CISPEP 3 PRO B 1 PRO B 2 0 -0.70 CISPEP 4 LEU B 52 PRO B 53 0 9.45 SITE 1 AC1 20 TYR A 7 PHE A 8 ARG A 13 TRP A 38 SITE 2 AC1 20 LYS A 44 GLN A 51 LEU A 52 PRO A 53 SITE 3 AC1 20 GLN A 64 SER A 65 TYR A 108 GLY A 205 SITE 4 AC1 20 HOH A 597 HOH A 607 HOH A 777 HOH A 843 SITE 5 AC1 20 HOH A 875 ASP B 98 VAL B 199 ASN B 200 SITE 1 AC2 19 ASP A 98 TYR B 7 PHE B 8 VAL B 10 SITE 2 AC2 19 ARG B 13 ILE B 35 TRP B 38 LYS B 44 SITE 3 AC2 19 GLN B 51 LEU B 52 PRO B 53 GLN B 64 SITE 4 AC2 19 SER B 65 TYR B 108 GLY B 205 HOH B 575 SITE 5 AC2 19 HOH B 626 HOH B 666 HOH B 765 CRYST1 60.612 60.612 233.888 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016498 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016498 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004276 0.00000