data_3OBD # _entry.id 3OBD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3OBD RCSB RCSB060901 WWPDB D_1000060901 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2012-11-21 _pdbx_database_PDB_obs_spr.pdb_id 4H07 _pdbx_database_PDB_obs_spr.replace_pdb_id 3OBD _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3ock _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3OBD _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-08-06 _pdbx_database_status.status_code OBS _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Huang, X.' 1 'Lebioda, L.' 2 # _citation.id primary _citation.title 'G65T mutation in sperm whale myoglobin leads to phenol binding in proximal cavity' _citation.journal_abbrev 'TO BE PUBLISHED' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Huang, X.' 1 primary 'Du, J.' 2 primary 'Dawson, J.H.' 3 primary 'Lebioda, L.' 4 # _cell.entry_id 3OBD _cell.length_a 90.531 _cell.length_b 90.531 _cell.length_c 45.128 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3OBD _symmetry.space_group_name_H-M 'P 6' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 168 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Myoglobin 17410.199 1 ? G65T ? ? 2 non-polymer syn 'PROTOPORPHYRIN IX CONTAINING FE' 616.487 1 ? ? ? ? 3 non-polymer syn PHENOL 94.111 1 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ? 5 water nat water 18.015 279 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MVLSEGEWQLVLHVWAKVEADVAGHGQDILIRLFKSHPETLEKFDRFKHLKTEAEMKASEDLKKHTVTVLTALGAILKKK GHHEAELKPLAQSHATKHKIPIKYLEFISEAIIHVLHSRHPGDFGADAQGAMNKALELFRKDIAAKYKELGYQG ; _entity_poly.pdbx_seq_one_letter_code_can ;MVLSEGEWQLVLHVWAKVEADVAGHGQDILIRLFKSHPETLEKFDRFKHLKTEAEMKASEDLKKHTVTVLTALGAILKKK GHHEAELKPLAQSHATKHKIPIKYLEFISEAIIHVLHSRHPGDFGADAQGAMNKALELFRKDIAAKYKELGYQG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 VAL n 1 3 LEU n 1 4 SER n 1 5 GLU n 1 6 GLY n 1 7 GLU n 1 8 TRP n 1 9 GLN n 1 10 LEU n 1 11 VAL n 1 12 LEU n 1 13 HIS n 1 14 VAL n 1 15 TRP n 1 16 ALA n 1 17 LYS n 1 18 VAL n 1 19 GLU n 1 20 ALA n 1 21 ASP n 1 22 VAL n 1 23 ALA n 1 24 GLY n 1 25 HIS n 1 26 GLY n 1 27 GLN n 1 28 ASP n 1 29 ILE n 1 30 LEU n 1 31 ILE n 1 32 ARG n 1 33 LEU n 1 34 PHE n 1 35 LYS n 1 36 SER n 1 37 HIS n 1 38 PRO n 1 39 GLU n 1 40 THR n 1 41 LEU n 1 42 GLU n 1 43 LYS n 1 44 PHE n 1 45 ASP n 1 46 ARG n 1 47 PHE n 1 48 LYS n 1 49 HIS n 1 50 LEU n 1 51 LYS n 1 52 THR n 1 53 GLU n 1 54 ALA n 1 55 GLU n 1 56 MET n 1 57 LYS n 1 58 ALA n 1 59 SER n 1 60 GLU n 1 61 ASP n 1 62 LEU n 1 63 LYS n 1 64 LYS n 1 65 HIS n 1 66 THR n 1 67 VAL n 1 68 THR n 1 69 VAL n 1 70 LEU n 1 71 THR n 1 72 ALA n 1 73 LEU n 1 74 GLY n 1 75 ALA n 1 76 ILE n 1 77 LEU n 1 78 LYS n 1 79 LYS n 1 80 LYS n 1 81 GLY n 1 82 HIS n 1 83 HIS n 1 84 GLU n 1 85 ALA n 1 86 GLU n 1 87 LEU n 1 88 LYS n 1 89 PRO n 1 90 LEU n 1 91 ALA n 1 92 GLN n 1 93 SER n 1 94 HIS n 1 95 ALA n 1 96 THR n 1 97 LYS n 1 98 HIS n 1 99 LYS n 1 100 ILE n 1 101 PRO n 1 102 ILE n 1 103 LYS n 1 104 TYR n 1 105 LEU n 1 106 GLU n 1 107 PHE n 1 108 ILE n 1 109 SER n 1 110 GLU n 1 111 ALA n 1 112 ILE n 1 113 ILE n 1 114 HIS n 1 115 VAL n 1 116 LEU n 1 117 HIS n 1 118 SER n 1 119 ARG n 1 120 HIS n 1 121 PRO n 1 122 GLY n 1 123 ASP n 1 124 PHE n 1 125 GLY n 1 126 ALA n 1 127 ASP n 1 128 ALA n 1 129 GLN n 1 130 GLY n 1 131 ALA n 1 132 MET n 1 133 ASN n 1 134 LYS n 1 135 ALA n 1 136 LEU n 1 137 GLU n 1 138 LEU n 1 139 PHE n 1 140 ARG n 1 141 LYS n 1 142 ASP n 1 143 ILE n 1 144 ALA n 1 145 ALA n 1 146 LYS n 1 147 TYR n 1 148 LYS n 1 149 GLU n 1 150 LEU n 1 151 GLY n 1 152 TYR n 1 153 GLN n 1 154 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Sperm whale' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene MB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Physeter catodon' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9755 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MYG_PHYCA _struct_ref.pdbx_db_accession P02185 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MVLSEGEWQLVLHVWAKVEADVAGHGQDILIRLFKSHPETLEKFDRFKHLKTEAEMKASEDLKKHGVTVLTALGAILKKK GHHEAELKPLAQSHATKHKIPIKYLEFISEAIIHVLHSRHPGDFGADAQGAMNKALELFRKDIAAKYKELGYQG ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3OBD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 154 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P02185 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 154 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 4000 _struct_ref_seq.pdbx_auth_seq_align_end 4153 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3OBD _struct_ref_seq_dif.mon_id THR _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 66 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P02185 _struct_ref_seq_dif.db_mon_id GLY _struct_ref_seq_dif.pdbx_seq_db_seq_num 66 _struct_ref_seq_dif.details 'ENGINEERED MUTATION' _struct_ref_seq_dif.pdbx_auth_seq_num 4065 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEM non-polymer . 'PROTOPORPHYRIN IX CONTAINING FE' HEME 'C34 H32 Fe N4 O4' 616.487 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IPH non-polymer . PHENOL ? 'C6 H6 O' 94.111 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3OBD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.07 _exptl_crystal.density_percent_sol 59.89 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method EVAPORATION _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '2.6M AS, 50mM Tris 8.5, 1mM EDTA, EVAPORATION, temperature 298K' # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2009-06-13 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 3OBD _reflns.observed_criterion_sigma_I 4.2 _reflns.observed_criterion_sigma_F 0.00 _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 1.140 _reflns.number_obs 76906 _reflns.number_all ? _reflns.percent_possible_obs 99.900 _reflns.pdbx_Rmerge_I_obs 0.052 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.400 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.500 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared 1 1 1.140 1.160 98.100 0.366 ? ? 3.700 ? ? ? ? ? ? 1 2 1.160 1.180 99.800 0.345 ? ? 4.900 ? ? ? ? ? ? 1 3 1.180 1.200 100.000 0.322 ? ? 5.500 ? ? ? ? ? ? 1 4 1.200 1.230 100.000 0.301 ? ? 5.700 ? ? ? ? ? ? 1 5 1.230 1.250 100.000 0.262 ? ? 5.800 ? ? ? ? ? ? 1 6 1.250 1.280 100.000 0.235 ? ? 5.800 ? ? ? ? ? ? 1 7 1.280 1.320 100.000 0.207 ? ? 5.900 ? ? ? ? ? ? 1 8 1.320 1.350 100.000 0.192 ? ? 5.900 ? ? ? ? ? ? 1 9 1.350 1.390 100.000 0.168 ? ? 6.000 ? ? ? ? ? ? 1 10 1.390 1.440 100.000 0.158 ? ? 6.000 ? ? ? ? ? ? 1 11 1.440 1.490 100.000 0.128 ? ? 6.000 ? ? ? ? ? ? 1 12 1.490 1.550 100.000 0.106 ? ? 6.100 ? ? ? ? ? ? 1 13 1.550 1.620 100.000 0.088 ? ? 6.100 ? ? ? ? ? ? 1 14 1.620 1.700 100.000 0.079 ? ? 6.200 ? ? ? ? ? ? 1 15 1.700 1.810 100.000 0.079 ? ? 6.800 ? ? ? ? ? ? 1 16 1.810 1.950 100.000 0.069 ? ? 12.200 ? ? ? ? ? ? 1 17 1.950 2.150 100.000 0.051 ? ? 12.600 ? ? ? ? ? ? 1 18 2.150 2.460 100.000 0.045 ? ? 12.600 ? ? ? ? ? ? 1 19 2.460 3.090 100.000 0.040 ? ? 12.600 ? ? ? ? ? ? 1 20 3.090 50.000 99.800 0.036 ? ? 12.200 ? ? ? ? ? ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3OBD _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 73044 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 39.20 _refine.ls_d_res_high 1.14 _refine.ls_percent_reflns_obs 99.88 _refine.ls_R_factor_obs 0.14202 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.14125 _refine.ls_R_factor_R_free 0.15634 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 3860 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.000 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc 0.971 _refine.correlation_coeff_Fo_to_Fc_free 0.967 _refine.B_iso_mean 14.838 _refine.aniso_B[1][1] 0.01 _refine.aniso_B[2][2] 0.01 _refine.aniso_B[3][3] -0.01 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.027 _refine.pdbx_overall_ESU_R_Free 0.027 _refine.overall_SU_ML 0.014 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 0.619 _refine.overall_SU_R_Cruickshank_DPI 0.0302 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1227 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 70 _refine_hist.number_atoms_solvent 279 _refine_hist.number_atoms_total 1576 _refine_hist.d_res_high 1.14 _refine_hist.d_res_low 39.20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.023 0.022 ? 1320 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.864 2.073 ? 1789 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.000 5.000 ? 153 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.102 24.151 ? 53 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.659 15.000 ? 236 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 10.717 15.000 ? 4 'X-RAY DIFFRACTION' ? r_chiral_restr 0.102 0.200 ? 184 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.014 0.021 ? 957 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.205 0.200 ? 706 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.305 0.200 ? 885 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.080 0.200 ? 219 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.197 0.200 ? 29 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.073 0.200 ? 23 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.758 1.500 ? 761 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.672 2.000 ? 1212 'X-RAY DIFFRACTION' ? r_scbond_it 4.954 3.000 ? 559 'X-RAY DIFFRACTION' ? r_scangle_it 6.624 4.500 ? 577 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 3.273 3.000 ? 1320 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.140 _refine_ls_shell.d_res_low 1.169 _refine_ls_shell.number_reflns_R_work 5264 _refine_ls_shell.R_factor_R_work 0.217 _refine_ls_shell.percent_reflns_obs 98.59 _refine_ls_shell.R_factor_R_free 0.226 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 274 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3OBD _struct.title 'Complex of G65T Myoglobin with Phenol in its Proximal Cavity' _struct.pdbx_descriptor Myoglobin _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3OBD _struct_keywords.pdbx_keywords 'OXYGEN TRANSPORT' _struct_keywords.text 'phenol binding, OXYGEN TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 4 ? GLU A 19 ? SER A 4003 GLU A 4018 1 ? 16 HELX_P HELX_P2 2 ASP A 21 ? HIS A 37 ? ASP A 4020 HIS A 4036 1 ? 17 HELX_P HELX_P3 3 PRO A 38 ? PHE A 44 ? PRO A 4037 PHE A 4043 5 ? 7 HELX_P HELX_P4 4 THR A 52 ? SER A 59 ? THR A 4051 SER A 4058 1 ? 8 HELX_P HELX_P5 5 SER A 59 ? LYS A 79 ? SER A 4058 LYS A 4078 1 ? 21 HELX_P HELX_P6 6 HIS A 83 ? LYS A 97 ? HIS A 4082 LYS A 4096 1 ? 15 HELX_P HELX_P7 7 PRO A 101 ? HIS A 120 ? PRO A 4100 HIS A 4119 1 ? 20 HELX_P HELX_P8 8 GLY A 125 ? GLY A 151 ? GLY A 4124 GLY A 4150 1 ? 27 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A HIS 94 NE2 ? ? ? 1_555 B HEM . FE ? ? A HIS 4093 A HEM 5154 1_555 ? ? ? ? ? ? ? 2.076 ? metalc2 metalc ? ? B HEM . FE ? ? ? 1_555 H HOH . O ? ? A HEM 5154 A HOH 8002 1_555 ? ? ? ? ? ? ? 2.098 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 20 'BINDING SITE FOR RESIDUE HEM A 5154' AC2 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE IPH A 9578' AC3 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE SO4 A 5156' AC4 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE SO4 A 5158' AC5 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE SO4 A 5159' AC6 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE SO4 A 5160' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 20 LYS A 43 ? LYS A 4042 . ? 1_555 ? 2 AC1 20 PHE A 44 ? PHE A 4043 . ? 1_555 ? 3 AC1 20 ARG A 46 ? ARG A 4045 . ? 1_555 ? 4 AC1 20 HIS A 65 ? HIS A 4064 . ? 1_555 ? 5 AC1 20 VAL A 69 ? VAL A 4068 . ? 1_555 ? 6 AC1 20 LEU A 90 ? LEU A 4089 . ? 1_555 ? 7 AC1 20 SER A 93 ? SER A 4092 . ? 1_555 ? 8 AC1 20 HIS A 94 ? HIS A 4093 . ? 1_555 ? 9 AC1 20 HIS A 98 ? HIS A 4097 . ? 1_555 ? 10 AC1 20 TYR A 104 ? TYR A 4103 . ? 1_555 ? 11 AC1 20 HOH H . ? HOH A 8002 . ? 1_555 ? 12 AC1 20 HOH H . ? HOH A 8038 . ? 1_555 ? 13 AC1 20 HOH H . ? HOH A 8071 . ? 1_555 ? 14 AC1 20 HOH H . ? HOH A 8095 . ? 1_555 ? 15 AC1 20 HOH H . ? HOH A 8211 . ? 1_555 ? 16 AC1 20 HOH H . ? HOH A 8213 . ? 1_555 ? 17 AC1 20 HOH H . ? HOH A 8214 . ? 1_555 ? 18 AC1 20 HOH H . ? HOH A 8215 . ? 1_555 ? 19 AC1 20 HOH H . ? HOH A 8230 . ? 1_555 ? 20 AC1 20 IPH C . ? IPH A 9578 . ? 1_555 ? 21 AC2 8 LEU A 90 ? LEU A 4089 . ? 1_555 ? 22 AC2 8 ALA A 91 ? ALA A 4090 . ? 1_555 ? 23 AC2 8 HIS A 94 ? HIS A 4093 . ? 1_555 ? 24 AC2 8 LEU A 105 ? LEU A 4104 . ? 1_555 ? 25 AC2 8 PHE A 139 ? PHE A 4138 . ? 1_555 ? 26 AC2 8 ILE A 143 ? ILE A 4142 . ? 1_555 ? 27 AC2 8 TYR A 147 ? TYR A 4146 . ? 1_555 ? 28 AC2 8 HEM B . ? HEM A 5154 . ? 1_555 ? 29 AC3 7 GLY A 125 ? GLY A 4124 . ? 6_555 ? 30 AC3 7 ALA A 126 ? ALA A 4125 . ? 6_555 ? 31 AC3 7 ASP A 127 ? ASP A 4126 . ? 6_555 ? 32 AC3 7 HOH H . ? HOH A 8216 . ? 1_555 ? 33 AC3 7 HOH H . ? HOH A 8219 . ? 1_555 ? 34 AC3 7 HOH H . ? HOH A 8220 . ? 1_555 ? 35 AC3 7 HOH H . ? HOH A 8221 . ? 1_555 ? 36 AC4 9 SER A 4 ? SER A 4003 . ? 1_554 ? 37 AC4 9 GLU A 5 ? GLU A 4004 . ? 1_554 ? 38 AC4 9 THR A 52 ? THR A 4051 . ? 1_555 ? 39 AC4 9 GLU A 53 ? GLU A 4052 . ? 1_555 ? 40 AC4 9 ALA A 54 ? ALA A 4053 . ? 1_555 ? 41 AC4 9 HOH H . ? HOH A 8016 . ? 1_554 ? 42 AC4 9 HOH H . ? HOH A 8236 . ? 1_555 ? 43 AC4 9 HOH H . ? HOH A 8237 . ? 1_555 ? 44 AC4 9 HOH H . ? HOH A 8255 . ? 1_554 ? 45 AC5 6 SER A 4 ? SER A 4003 . ? 1_555 ? 46 AC5 6 GLY A 6 ? GLY A 4005 . ? 1_555 ? 47 AC5 6 HOH H . ? HOH A 8016 . ? 1_555 ? 48 AC5 6 HOH H . ? HOH A 8019 . ? 1_555 ? 49 AC5 6 HOH H . ? HOH A 8020 . ? 1_555 ? 50 AC5 6 HOH H . ? HOH A 8255 . ? 1_555 ? 51 AC6 6 ARG A 46 ? ARG A 4045 . ? 1_555 ? 52 AC6 6 HIS A 65 ? HIS A 4064 . ? 1_555 ? 53 AC6 6 THR A 68 ? THR A 4067 . ? 1_555 ? 54 AC6 6 HOH H . ? HOH A 8093 . ? 1_555 ? 55 AC6 6 HOH H . ? HOH A 8120 . ? 1_555 ? 56 AC6 6 HOH H . ? HOH A 8228 . ? 1_555 ? # _atom_sites.entry_id 3OBD _atom_sites.fract_transf_matrix[1][1] 0.011046 _atom_sites.fract_transf_matrix[1][2] 0.006377 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012755 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022159 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 4000 4000 MET MET A . n A 1 2 VAL 2 4001 4001 VAL VAL A . n A 1 3 LEU 3 4002 4002 LEU LEU A . n A 1 4 SER 4 4003 4003 SER SER A . n A 1 5 GLU 5 4004 4004 GLU GLU A . n A 1 6 GLY 6 4005 4005 GLY GLY A . n A 1 7 GLU 7 4006 4006 GLU GLU A . n A 1 8 TRP 8 4007 4007 TRP TRP A . n A 1 9 GLN 9 4008 4008 GLN GLN A . n A 1 10 LEU 10 4009 4009 LEU LEU A . n A 1 11 VAL 11 4010 4010 VAL VAL A . n A 1 12 LEU 12 4011 4011 LEU LEU A . n A 1 13 HIS 13 4012 4012 HIS HIS A . n A 1 14 VAL 14 4013 4013 VAL VAL A . n A 1 15 TRP 15 4014 4014 TRP TRP A . n A 1 16 ALA 16 4015 4015 ALA ALA A . n A 1 17 LYS 17 4016 4016 LYS LYS A . n A 1 18 VAL 18 4017 4017 VAL VAL A . n A 1 19 GLU 19 4018 4018 GLU GLU A . n A 1 20 ALA 20 4019 4019 ALA ALA A . n A 1 21 ASP 21 4020 4020 ASP ASP A . n A 1 22 VAL 22 4021 4021 VAL VAL A . n A 1 23 ALA 23 4022 4022 ALA ALA A . n A 1 24 GLY 24 4023 4023 GLY GLY A . n A 1 25 HIS 25 4024 4024 HIS HIS A . n A 1 26 GLY 26 4025 4025 GLY GLY A . n A 1 27 GLN 27 4026 4026 GLN GLN A . n A 1 28 ASP 28 4027 4027 ASP ASP A . n A 1 29 ILE 29 4028 4028 ILE ILE A . n A 1 30 LEU 30 4029 4029 LEU LEU A . n A 1 31 ILE 31 4030 4030 ILE ILE A . n A 1 32 ARG 32 4031 4031 ARG ARG A . n A 1 33 LEU 33 4032 4032 LEU LEU A . n A 1 34 PHE 34 4033 4033 PHE PHE A . n A 1 35 LYS 35 4034 4034 LYS LYS A . n A 1 36 SER 36 4035 4035 SER SER A . n A 1 37 HIS 37 4036 4036 HIS HIS A . n A 1 38 PRO 38 4037 4037 PRO PRO A . n A 1 39 GLU 39 4038 4038 GLU GLU A . n A 1 40 THR 40 4039 4039 THR THR A . n A 1 41 LEU 41 4040 4040 LEU LEU A . n A 1 42 GLU 42 4041 4041 GLU GLU A . n A 1 43 LYS 43 4042 4042 LYS LYS A . n A 1 44 PHE 44 4043 4043 PHE PHE A . n A 1 45 ASP 45 4044 4044 ASP ASP A . n A 1 46 ARG 46 4045 4045 ARG ARG A . n A 1 47 PHE 47 4046 4046 PHE PHE A . n A 1 48 LYS 48 4047 4047 LYS LYS A . n A 1 49 HIS 49 4048 4048 HIS HIS A . n A 1 50 LEU 50 4049 4049 LEU LEU A . n A 1 51 LYS 51 4050 4050 LYS LYS A . n A 1 52 THR 52 4051 4051 THR THR A . n A 1 53 GLU 53 4052 4052 GLU GLU A . n A 1 54 ALA 54 4053 4053 ALA ALA A . n A 1 55 GLU 55 4054 4054 GLU GLU A . n A 1 56 MET 56 4055 4055 MET MET A . n A 1 57 LYS 57 4056 4056 LYS LYS A . n A 1 58 ALA 58 4057 4057 ALA ALA A . n A 1 59 SER 59 4058 4058 SER SER A . n A 1 60 GLU 60 4059 4059 GLU GLU A . n A 1 61 ASP 61 4060 4060 ASP ASP A . n A 1 62 LEU 62 4061 4061 LEU LEU A . n A 1 63 LYS 63 4062 4062 LYS LYS A . n A 1 64 LYS 64 4063 4063 LYS LYS A . n A 1 65 HIS 65 4064 4064 HIS HIS A . n A 1 66 THR 66 4065 4065 THR THR A . n A 1 67 VAL 67 4066 4066 VAL VAL A . n A 1 68 THR 68 4067 4067 THR THR A . n A 1 69 VAL 69 4068 4068 VAL VAL A . n A 1 70 LEU 70 4069 4069 LEU LEU A . n A 1 71 THR 71 4070 4070 THR THR A . n A 1 72 ALA 72 4071 4071 ALA ALA A . n A 1 73 LEU 73 4072 4072 LEU LEU A . n A 1 74 GLY 74 4073 4073 GLY GLY A . n A 1 75 ALA 75 4074 4074 ALA ALA A . n A 1 76 ILE 76 4075 4075 ILE ILE A . n A 1 77 LEU 77 4076 4076 LEU LEU A . n A 1 78 LYS 78 4077 4077 LYS LYS A . n A 1 79 LYS 79 4078 4078 LYS LYS A . n A 1 80 LYS 80 4079 4079 LYS LYS A . n A 1 81 GLY 81 4080 4080 GLY GLY A . n A 1 82 HIS 82 4081 4081 HIS HIS A . n A 1 83 HIS 83 4082 4082 HIS HIS A . n A 1 84 GLU 84 4083 4083 GLU GLU A . n A 1 85 ALA 85 4084 4084 ALA ALA A . n A 1 86 GLU 86 4085 4085 GLU GLU A . n A 1 87 LEU 87 4086 4086 LEU LEU A . n A 1 88 LYS 88 4087 4087 LYS LYS A . n A 1 89 PRO 89 4088 4088 PRO PRO A . n A 1 90 LEU 90 4089 4089 LEU LEU A . n A 1 91 ALA 91 4090 4090 ALA ALA A . n A 1 92 GLN 92 4091 4091 GLN GLN A . n A 1 93 SER 93 4092 4092 SER SER A . n A 1 94 HIS 94 4093 4093 HIS HIS A . n A 1 95 ALA 95 4094 4094 ALA ALA A . n A 1 96 THR 96 4095 4095 THR THR A . n A 1 97 LYS 97 4096 4096 LYS LYS A . n A 1 98 HIS 98 4097 4097 HIS HIS A . n A 1 99 LYS 99 4098 4098 LYS LYS A . n A 1 100 ILE 100 4099 4099 ILE ILE A . n A 1 101 PRO 101 4100 4100 PRO PRO A . n A 1 102 ILE 102 4101 4101 ILE ILE A . n A 1 103 LYS 103 4102 4102 LYS LYS A . n A 1 104 TYR 104 4103 4103 TYR TYR A . n A 1 105 LEU 105 4104 4104 LEU LEU A . n A 1 106 GLU 106 4105 4105 GLU GLU A . n A 1 107 PHE 107 4106 4106 PHE PHE A . n A 1 108 ILE 108 4107 4107 ILE ILE A . n A 1 109 SER 109 4108 4108 SER SER A . n A 1 110 GLU 110 4109 4109 GLU GLU A . n A 1 111 ALA 111 4110 4110 ALA ALA A . n A 1 112 ILE 112 4111 4111 ILE ILE A . n A 1 113 ILE 113 4112 4112 ILE ILE A . n A 1 114 HIS 114 4113 4113 HIS HIS A . n A 1 115 VAL 115 4114 4114 VAL VAL A . n A 1 116 LEU 116 4115 4115 LEU LEU A . n A 1 117 HIS 117 4116 4116 HIS HIS A . n A 1 118 SER 118 4117 4117 SER SER A . n A 1 119 ARG 119 4118 4118 ARG ARG A . n A 1 120 HIS 120 4119 4119 HIS HIS A . n A 1 121 PRO 121 4120 4120 PRO PRO A . n A 1 122 GLY 122 4121 4121 GLY GLY A . n A 1 123 ASP 123 4122 4122 ASP ASP A . n A 1 124 PHE 124 4123 4123 PHE PHE A . n A 1 125 GLY 125 4124 4124 GLY GLY A . n A 1 126 ALA 126 4125 4125 ALA ALA A . n A 1 127 ASP 127 4126 4126 ASP ASP A . n A 1 128 ALA 128 4127 4127 ALA ALA A . n A 1 129 GLN 129 4128 4128 GLN GLN A . n A 1 130 GLY 130 4129 4129 GLY GLY A . n A 1 131 ALA 131 4130 4130 ALA ALA A . n A 1 132 MET 132 4131 4131 MET MET A . n A 1 133 ASN 133 4132 4132 ASN ASN A . n A 1 134 LYS 134 4133 4133 LYS LYS A . n A 1 135 ALA 135 4134 4134 ALA ALA A . n A 1 136 LEU 136 4135 4135 LEU LEU A . n A 1 137 GLU 137 4136 4136 GLU GLU A . n A 1 138 LEU 138 4137 4137 LEU LEU A . n A 1 139 PHE 139 4138 4138 PHE PHE A . n A 1 140 ARG 140 4139 4139 ARG ARG A . n A 1 141 LYS 141 4140 4140 LYS LYS A . n A 1 142 ASP 142 4141 4141 ASP ASP A . n A 1 143 ILE 143 4142 4142 ILE ILE A . n A 1 144 ALA 144 4143 4143 ALA ALA A . n A 1 145 ALA 145 4144 4144 ALA ALA A . n A 1 146 LYS 146 4145 4145 LYS LYS A . n A 1 147 TYR 147 4146 4146 TYR TYR A . n A 1 148 LYS 148 4147 4147 LYS LYS A . n A 1 149 GLU 149 4148 4148 GLU GLU A . n A 1 150 LEU 150 4149 4149 LEU LEU A . n A 1 151 GLY 151 4150 4150 GLY GLY A . n A 1 152 TYR 152 4151 4151 TYR TYR A . n A 1 153 GLN 153 4152 4152 GLN GLN A . n A 1 154 GLY 154 4153 4153 GLY GLY A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM 1 5154 5154 HEM HEM A . C 3 IPH 1 9578 9578 IPH IPH A . D 4 SO4 1 5156 5156 SO4 SO4 A . E 4 SO4 1 5158 5158 SO4 SO4 A . F 4 SO4 1 5159 5159 SO4 SO4 A . G 4 SO4 1 5160 5160 SO4 SO4 A . H 5 HOH 1 8001 8001 HOH HOH A . H 5 HOH 2 8002 8002 HOH HOH A . H 5 HOH 3 8003 8003 HOH HOH A . H 5 HOH 4 8004 8004 HOH HOH A . H 5 HOH 5 8005 8005 HOH HOH A . H 5 HOH 6 8006 8006 HOH HOH A . H 5 HOH 7 8007 8007 HOH HOH A . H 5 HOH 8 8008 8008 HOH HOH A . H 5 HOH 9 8009 8009 HOH HOH A . H 5 HOH 10 8010 8010 HOH HOH A . H 5 HOH 11 8011 8011 HOH HOH A . H 5 HOH 12 8012 8012 HOH HOH A . H 5 HOH 13 8013 8013 HOH HOH A . H 5 HOH 14 8014 8014 HOH HOH A . H 5 HOH 15 8015 8015 HOH HOH A . H 5 HOH 16 8016 8016 HOH HOH A . H 5 HOH 17 8017 8017 HOH HOH A . H 5 HOH 18 8018 8018 HOH HOH A . H 5 HOH 19 8019 8019 HOH HOH A . H 5 HOH 20 8020 8020 HOH HOH A . H 5 HOH 21 8021 8021 HOH HOH A . H 5 HOH 22 8022 8022 HOH HOH A . H 5 HOH 23 8023 8023 HOH HOH A . H 5 HOH 24 8024 8024 HOH HOH A . H 5 HOH 25 8025 8025 HOH HOH A . H 5 HOH 26 8026 8026 HOH HOH A . H 5 HOH 27 8027 8027 HOH HOH A . H 5 HOH 28 8028 8028 HOH HOH A . H 5 HOH 29 8029 8029 HOH HOH A . H 5 HOH 30 8030 8030 HOH HOH A . H 5 HOH 31 8031 8031 HOH HOH A . H 5 HOH 32 8032 8032 HOH HOH A . H 5 HOH 33 8033 8033 HOH HOH A . H 5 HOH 34 8034 8034 HOH HOH A . H 5 HOH 35 8035 8035 HOH HOH A . H 5 HOH 36 8036 8036 HOH HOH A . H 5 HOH 37 8037 8037 HOH HOH A . H 5 HOH 38 8038 8038 HOH HOH A . H 5 HOH 39 8039 8039 HOH HOH A . H 5 HOH 40 8040 8040 HOH HOH A . H 5 HOH 41 8041 8041 HOH HOH A . H 5 HOH 42 8042 8042 HOH HOH A . H 5 HOH 43 8043 8043 HOH HOH A . H 5 HOH 44 8044 8044 HOH HOH A . H 5 HOH 45 8045 8045 HOH HOH A . H 5 HOH 46 8046 8046 HOH HOH A . H 5 HOH 47 8047 8047 HOH HOH A . H 5 HOH 48 8048 8048 HOH HOH A . H 5 HOH 49 8049 8049 HOH HOH A . H 5 HOH 50 8050 8050 HOH HOH A . H 5 HOH 51 8051 8051 HOH HOH A . H 5 HOH 52 8052 8052 HOH HOH A . H 5 HOH 53 8053 8053 HOH HOH A . H 5 HOH 54 8054 8054 HOH HOH A . H 5 HOH 55 8055 8055 HOH HOH A . H 5 HOH 56 8056 8056 HOH HOH A . H 5 HOH 57 8057 8057 HOH HOH A . H 5 HOH 58 8058 8058 HOH HOH A . H 5 HOH 59 8059 8059 HOH HOH A . H 5 HOH 60 8060 8060 HOH HOH A . H 5 HOH 61 8061 8061 HOH HOH A . H 5 HOH 62 8062 8062 HOH HOH A . H 5 HOH 63 8063 8063 HOH HOH A . H 5 HOH 64 8064 8064 HOH HOH A . H 5 HOH 65 8065 8065 HOH HOH A . H 5 HOH 66 8066 8066 HOH HOH A . H 5 HOH 67 8067 8067 HOH HOH A . H 5 HOH 68 8068 8068 HOH HOH A . H 5 HOH 69 8069 8069 HOH HOH A . H 5 HOH 70 8070 8070 HOH HOH A . H 5 HOH 71 8071 8071 HOH HOH A . H 5 HOH 72 8072 8072 HOH HOH A . H 5 HOH 73 8073 8073 HOH HOH A . H 5 HOH 74 8074 8074 HOH HOH A . H 5 HOH 75 8075 8075 HOH HOH A . H 5 HOH 76 8076 8076 HOH HOH A . H 5 HOH 77 8077 8077 HOH HOH A . H 5 HOH 78 8078 8078 HOH HOH A . H 5 HOH 79 8079 8079 HOH HOH A . H 5 HOH 80 8080 8080 HOH HOH A . H 5 HOH 81 8081 8081 HOH HOH A . H 5 HOH 82 8082 8082 HOH HOH A . H 5 HOH 83 8083 8083 HOH HOH A . H 5 HOH 84 8084 8084 HOH HOH A . H 5 HOH 85 8085 8085 HOH HOH A . H 5 HOH 86 8086 8086 HOH HOH A . H 5 HOH 87 8087 8087 HOH HOH A . H 5 HOH 88 8088 8088 HOH HOH A . H 5 HOH 89 8089 8089 HOH HOH A . H 5 HOH 90 8090 8090 HOH HOH A . H 5 HOH 91 8091 8091 HOH HOH A . H 5 HOH 92 8092 8092 HOH HOH A . H 5 HOH 93 8093 8093 HOH HOH A . H 5 HOH 94 8094 8094 HOH HOH A . H 5 HOH 95 8095 8095 HOH HOH A . H 5 HOH 96 8096 8096 HOH HOH A . H 5 HOH 97 8097 8097 HOH HOH A . H 5 HOH 98 8098 8098 HOH HOH A . H 5 HOH 99 8099 8099 HOH HOH A . H 5 HOH 100 8100 8100 HOH HOH A . H 5 HOH 101 8101 8101 HOH HOH A . H 5 HOH 102 8102 8102 HOH HOH A . H 5 HOH 103 8103 8103 HOH HOH A . H 5 HOH 104 8104 8104 HOH HOH A . H 5 HOH 105 8105 8105 HOH HOH A . H 5 HOH 106 8106 8106 HOH HOH A . H 5 HOH 107 8107 8107 HOH HOH A . H 5 HOH 108 8108 8108 HOH HOH A . H 5 HOH 109 8109 8109 HOH HOH A . H 5 HOH 110 8110 8110 HOH HOH A . H 5 HOH 111 8111 8111 HOH HOH A . H 5 HOH 112 8112 8112 HOH HOH A . H 5 HOH 113 8113 8113 HOH HOH A . H 5 HOH 114 8114 8114 HOH HOH A . H 5 HOH 115 8115 8115 HOH HOH A . H 5 HOH 116 8116 8116 HOH HOH A . H 5 HOH 117 8117 8117 HOH HOH A . H 5 HOH 118 8118 8118 HOH HOH A . H 5 HOH 119 8119 8119 HOH HOH A . H 5 HOH 120 8120 8120 HOH HOH A . H 5 HOH 121 8121 8121 HOH HOH A . H 5 HOH 122 8122 8122 HOH HOH A . H 5 HOH 123 8123 8123 HOH HOH A . H 5 HOH 124 8124 8124 HOH HOH A . H 5 HOH 125 8125 8125 HOH HOH A . H 5 HOH 126 8126 8126 HOH HOH A . H 5 HOH 127 8127 8127 HOH HOH A . H 5 HOH 128 8128 8128 HOH HOH A . H 5 HOH 129 8129 8129 HOH HOH A . H 5 HOH 130 8130 8130 HOH HOH A . H 5 HOH 131 8131 8131 HOH HOH A . H 5 HOH 132 8132 8132 HOH HOH A . H 5 HOH 133 8133 8133 HOH HOH A . H 5 HOH 134 8134 8134 HOH HOH A . H 5 HOH 135 8135 8135 HOH HOH A . H 5 HOH 136 8136 8136 HOH HOH A . H 5 HOH 137 8137 8137 HOH HOH A . H 5 HOH 138 8138 8138 HOH HOH A . H 5 HOH 139 8139 8139 HOH HOH A . H 5 HOH 140 8140 8140 HOH HOH A . H 5 HOH 141 8141 8141 HOH HOH A . H 5 HOH 142 8142 8142 HOH HOH A . H 5 HOH 143 8143 8143 HOH HOH A . H 5 HOH 144 8144 8144 HOH HOH A . H 5 HOH 145 8145 8145 HOH HOH A . H 5 HOH 146 8146 8146 HOH HOH A . H 5 HOH 147 8147 8147 HOH HOH A . H 5 HOH 148 8148 8148 HOH HOH A . H 5 HOH 149 8149 8149 HOH HOH A . H 5 HOH 150 8150 8150 HOH HOH A . H 5 HOH 151 8151 8151 HOH HOH A . H 5 HOH 152 8152 8152 HOH HOH A . H 5 HOH 153 8153 8153 HOH HOH A . H 5 HOH 154 8154 8154 HOH HOH A . H 5 HOH 155 8155 8155 HOH HOH A . H 5 HOH 156 8156 8156 HOH HOH A . H 5 HOH 157 8157 8157 HOH HOH A . H 5 HOH 158 8158 8158 HOH HOH A . H 5 HOH 159 8159 8159 HOH HOH A . H 5 HOH 160 8160 8160 HOH HOH A . H 5 HOH 161 8161 8161 HOH HOH A . H 5 HOH 162 8162 8162 HOH HOH A . H 5 HOH 163 8163 8163 HOH HOH A . H 5 HOH 164 8164 8164 HOH HOH A . H 5 HOH 165 8165 8165 HOH HOH A . H 5 HOH 166 8166 8166 HOH HOH A . H 5 HOH 167 8167 8167 HOH HOH A . H 5 HOH 168 8168 8168 HOH HOH A . H 5 HOH 169 8169 8169 HOH HOH A . H 5 HOH 170 8170 8170 HOH HOH A . H 5 HOH 171 8171 8171 HOH HOH A . H 5 HOH 172 8172 8172 HOH HOH A . H 5 HOH 173 8173 8173 HOH HOH A . H 5 HOH 174 8174 8174 HOH HOH A . H 5 HOH 175 8175 8175 HOH HOH A . H 5 HOH 176 8176 8176 HOH HOH A . H 5 HOH 177 8177 8177 HOH HOH A . H 5 HOH 178 8178 8178 HOH HOH A . H 5 HOH 179 8179 8179 HOH HOH A . H 5 HOH 180 8180 8180 HOH HOH A . H 5 HOH 181 8181 8181 HOH HOH A . H 5 HOH 182 8182 8182 HOH HOH A . H 5 HOH 183 8183 8183 HOH HOH A . H 5 HOH 184 8184 8184 HOH HOH A . H 5 HOH 185 8185 8185 HOH HOH A . H 5 HOH 186 8186 8186 HOH HOH A . H 5 HOH 187 8187 8187 HOH HOH A . H 5 HOH 188 8188 8188 HOH HOH A . H 5 HOH 189 8189 8189 HOH HOH A . H 5 HOH 190 8190 8190 HOH HOH A . H 5 HOH 191 8191 8191 HOH HOH A . H 5 HOH 192 8192 8192 HOH HOH A . H 5 HOH 193 8193 8193 HOH HOH A . H 5 HOH 194 8194 8194 HOH HOH A . H 5 HOH 195 8195 8195 HOH HOH A . H 5 HOH 196 8196 8196 HOH HOH A . H 5 HOH 197 8197 8197 HOH HOH A . H 5 HOH 198 8198 8198 HOH HOH A . H 5 HOH 199 8199 8199 HOH HOH A . H 5 HOH 200 8200 8200 HOH HOH A . H 5 HOH 201 8201 8201 HOH HOH A . H 5 HOH 202 8202 8202 HOH HOH A . H 5 HOH 203 8203 8203 HOH HOH A . H 5 HOH 204 8204 8204 HOH HOH A . H 5 HOH 205 8205 8205 HOH HOH A . H 5 HOH 206 8206 8206 HOH HOH A . H 5 HOH 207 8207 8207 HOH HOH A . H 5 HOH 208 8208 8208 HOH HOH A . H 5 HOH 209 8209 8209 HOH HOH A . H 5 HOH 210 8210 8210 HOH HOH A . H 5 HOH 211 8211 8211 HOH HOH A . H 5 HOH 212 8212 8212 HOH HOH A . H 5 HOH 213 8213 8213 HOH HOH A . H 5 HOH 214 8214 8214 HOH HOH A . H 5 HOH 215 8215 8215 HOH HOH A . H 5 HOH 216 8216 8216 HOH HOH A . H 5 HOH 217 8217 8217 HOH HOH A . H 5 HOH 218 8218 8218 HOH HOH A . H 5 HOH 219 8219 8219 HOH HOH A . H 5 HOH 220 8220 8220 HOH HOH A . H 5 HOH 221 8221 8221 HOH HOH A . H 5 HOH 222 8222 8222 HOH HOH A . H 5 HOH 223 8223 8223 HOH HOH A . H 5 HOH 224 8224 8224 HOH HOH A . H 5 HOH 225 8225 8225 HOH HOH A . H 5 HOH 226 8226 8226 HOH HOH A . H 5 HOH 227 8227 8227 HOH HOH A . H 5 HOH 228 8228 8228 HOH HOH A . H 5 HOH 229 8229 8229 HOH HOH A . H 5 HOH 230 8230 8230 HOH HOH A . H 5 HOH 231 8231 8231 HOH HOH A . H 5 HOH 232 8232 8232 HOH HOH A . H 5 HOH 233 8233 8233 HOH HOH A . H 5 HOH 234 8234 8234 HOH HOH A . H 5 HOH 235 8235 8235 HOH HOH A . H 5 HOH 236 8236 8236 HOH HOH A . H 5 HOH 237 8237 8237 HOH HOH A . H 5 HOH 238 8238 8238 HOH HOH A . H 5 HOH 239 8239 8239 HOH HOH A . H 5 HOH 240 8240 8240 HOH HOH A . H 5 HOH 241 8241 8241 HOH HOH A . H 5 HOH 242 8242 8242 HOH HOH A . H 5 HOH 243 8243 8243 HOH HOH A . H 5 HOH 244 8244 8244 HOH HOH A . H 5 HOH 245 8245 8245 HOH HOH A . H 5 HOH 246 8246 8246 HOH HOH A . H 5 HOH 247 8247 8247 HOH HOH A . H 5 HOH 248 8248 8248 HOH HOH A . H 5 HOH 249 8249 8249 HOH HOH A . H 5 HOH 250 8250 8250 HOH HOH A . H 5 HOH 251 8251 8251 HOH HOH A . H 5 HOH 252 8252 8252 HOH HOH A . H 5 HOH 253 8253 8253 HOH HOH A . H 5 HOH 254 8254 8254 HOH HOH A . H 5 HOH 255 8255 8255 HOH HOH A . H 5 HOH 256 8256 8256 HOH HOH A . H 5 HOH 257 8257 8257 HOH HOH A . H 5 HOH 258 8258 8258 HOH HOH A . H 5 HOH 259 8259 8259 HOH HOH A . H 5 HOH 260 8260 8260 HOH HOH A . H 5 HOH 261 8261 8261 HOH HOH A . H 5 HOH 262 8262 8262 HOH HOH A . H 5 HOH 263 8263 8263 HOH HOH A . H 5 HOH 264 8264 8264 HOH HOH A . H 5 HOH 265 8265 8265 HOH HOH A . H 5 HOH 266 8266 8266 HOH HOH A . H 5 HOH 267 8267 8267 HOH HOH A . H 5 HOH 268 8268 8268 HOH HOH A . H 5 HOH 269 8269 8269 HOH HOH A . H 5 HOH 270 8270 8270 HOH HOH A . H 5 HOH 271 8271 8271 HOH HOH A . H 5 HOH 272 8272 8272 HOH HOH A . H 5 HOH 273 8273 8273 HOH HOH A . H 5 HOH 274 8274 8274 HOH HOH A . H 5 HOH 275 8275 8275 HOH HOH A . H 5 HOH 276 8276 8276 HOH HOH A . H 5 HOH 277 8277 8277 HOH HOH A . H 5 HOH 278 8278 8278 HOH HOH A . H 5 HOH 279 8279 8279 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 8229 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id H _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 94 ? A HIS 4093 ? 1_555 FE ? B HEM . ? A HEM 5154 ? 1_555 NA ? B HEM . ? A HEM 5154 ? 1_555 90.1 ? 2 NE2 ? A HIS 94 ? A HIS 4093 ? 1_555 FE ? B HEM . ? A HEM 5154 ? 1_555 NB ? B HEM . ? A HEM 5154 ? 1_555 91.6 ? 3 NA ? B HEM . ? A HEM 5154 ? 1_555 FE ? B HEM . ? A HEM 5154 ? 1_555 NB ? B HEM . ? A HEM 5154 ? 1_555 89.5 ? 4 NE2 ? A HIS 94 ? A HIS 4093 ? 1_555 FE ? B HEM . ? A HEM 5154 ? 1_555 NC ? B HEM . ? A HEM 5154 ? 1_555 94.0 ? 5 NA ? B HEM . ? A HEM 5154 ? 1_555 FE ? B HEM . ? A HEM 5154 ? 1_555 NC ? B HEM . ? A HEM 5154 ? 1_555 175.9 ? 6 NB ? B HEM . ? A HEM 5154 ? 1_555 FE ? B HEM . ? A HEM 5154 ? 1_555 NC ? B HEM . ? A HEM 5154 ? 1_555 89.7 ? 7 NE2 ? A HIS 94 ? A HIS 4093 ? 1_555 FE ? B HEM . ? A HEM 5154 ? 1_555 ND ? B HEM . ? A HEM 5154 ? 1_555 91.8 ? 8 NA ? B HEM . ? A HEM 5154 ? 1_555 FE ? B HEM . ? A HEM 5154 ? 1_555 ND ? B HEM . ? A HEM 5154 ? 1_555 89.8 ? 9 NB ? B HEM . ? A HEM 5154 ? 1_555 FE ? B HEM . ? A HEM 5154 ? 1_555 ND ? B HEM . ? A HEM 5154 ? 1_555 176.5 ? 10 NC ? B HEM . ? A HEM 5154 ? 1_555 FE ? B HEM . ? A HEM 5154 ? 1_555 ND ? B HEM . ? A HEM 5154 ? 1_555 90.8 ? 11 NE2 ? A HIS 94 ? A HIS 4093 ? 1_555 FE ? B HEM . ? A HEM 5154 ? 1_555 O ? H HOH . ? A HOH 8002 ? 1_555 176.4 ? 12 NA ? B HEM . ? A HEM 5154 ? 1_555 FE ? B HEM . ? A HEM 5154 ? 1_555 O ? H HOH . ? A HOH 8002 ? 1_555 91.5 ? 13 NB ? B HEM . ? A HEM 5154 ? 1_555 FE ? B HEM . ? A HEM 5154 ? 1_555 O ? H HOH . ? A HOH 8002 ? 1_555 91.6 ? 14 NC ? B HEM . ? A HEM 5154 ? 1_555 FE ? B HEM . ? A HEM 5154 ? 1_555 O ? H HOH . ? A HOH 8002 ? 1_555 84.5 ? 15 ND ? B HEM . ? A HEM 5154 ? 1_555 FE ? B HEM . ? A HEM 5154 ? 1_555 O ? H HOH . ? A HOH 8002 ? 1_555 85.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-10-19 2 'Structure model' 1 1 2012-11-21 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group Other # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 HKL . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data processing' http://www.hkl-xray.com/ ? ? 2 REFMAC5 . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 HKL-3000 . ? ? ? ? 'data collection' ? ? ? 5 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 6 HKL . ? ? ? ? 'data scaling' ? ? ? 7 AMoRE . ? ? ? ? phasing ? ? ? 8 REFMAC 5.5.0109 ? ? ? ? refinement ? ? ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 8152 ? ? O A HOH 8207 ? ? 1.77 2 1 O A HOH 8063 ? ? O A HOH 8131 ? ? 1.82 3 1 O A HOH 8053 ? ? O A HOH 8273 ? ? 2.01 4 1 NZ A LYS 4133 ? ? O A HOH 8004 ? ? 2.12 5 1 O A MET 4000 ? ? O A HOH 8001 ? ? 2.18 6 1 O A HOH 8051 ? ? O A HOH 8238 ? ? 2.19 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 8036 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 8036 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_445 _pdbx_validate_symm_contact.dist 1.77 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CB A VAL 4001 ? ? CG1 A VAL 4001 ? ? 1.395 1.524 -0.129 0.021 N 2 1 CZ A ARG 4045 ? ? NH2 A ARG 4045 ? ? 1.440 1.326 0.114 0.013 N 3 1 CD A LYS 4102 ? ? CE A LYS 4102 ? ? 1.659 1.508 0.151 0.025 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 4118 ? ? CZ A ARG 4118 ? ? NH1 A ARG 4118 ? ? 114.00 120.30 -6.30 0.50 N 2 1 NE A ARG 4118 ? ? CZ A ARG 4118 ? ? NH2 A ARG 4118 ? ? 127.84 120.30 7.54 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 4020 ? ? -161.47 75.65 2 1 HIS A 4081 ? ? -91.54 57.72 3 1 PHE A 4123 ? ? -143.09 46.92 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 4045 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.093 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A LYS 4102 ? CE ? A LYS 103 CE 2 1 Y 0 A LYS 4102 ? NZ ? A LYS 103 NZ 3 1 Y 0 A TYR 4151 ? O ? A TYR 152 O 4 1 Y 0 A GLN 4152 ? CB ? A GLN 153 CB 5 1 Y 0 A GLN 4152 ? CG ? A GLN 153 CG 6 1 Y 0 A GLN 4152 ? CD ? A GLN 153 CD 7 1 Y 0 A GLN 4152 ? OE1 ? A GLN 153 OE1 8 1 Y 0 A GLN 4152 ? NE2 ? A GLN 153 NE2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PROTOPORPHYRIN IX CONTAINING FE' HEM 3 PHENOL IPH 4 'SULFATE ION' SO4 5 water HOH #