HEADER HYDROLASE INHIBITOR 11-AUG-10 3OD9 TITLE CRYSTAL STRUCTURE OF PLII-AH, PERIPLASMIC LYSOZYME INHIBITOR OF I-TYPE TITLE 2 LYSOZYME FROM AEROMONAS HYDROPHYLA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE EXPORTED PROTEIN; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEROMONAS HYDROPHILA; SOURCE 3 ORGANISM_TAXID: 380703; SOURCE 4 STRAIN: ATCC 7966 / NCIB 9240; SOURCE 5 GENE: AHA_1205; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET26B KEYWDS BETA SANDWICH, C-TERMINAL HELIX, HYDROLASE INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR S.LEYSEN,J.M.VAN HERREWEGHE,L.CALLEWAERT,M.HEIRBAUT,P.BUNTINX, AUTHOR 2 C.W.MICHIELS,S.V.STRELKOV REVDAT 4 21-FEB-24 3OD9 1 REMARK SEQADV LINK REVDAT 3 02-FEB-11 3OD9 1 JRNL REVDAT 2 19-JAN-11 3OD9 1 JRNL REVDAT 1 22-DEC-10 3OD9 0 JRNL AUTH S.LEYSEN,J.M.VAN HERREWEGHE,L.CALLEWAERT,M.HEIRBAUT, JRNL AUTH 2 P.BUNTINX,C.W.MICHIELS,S.V.STRELKOV JRNL TITL MOLECULAR BASIS OF BACTERIAL DEFENSE AGAINST HOST LYSOZYMES: JRNL TITL 2 X-RAY STRUCTURES OF PERIPLASMIC LYSOZYME INHIBITORS PLII AND JRNL TITL 3 PLIC. JRNL REF J.MOL.BIOL. V. 405 1233 2011 JRNL REFN ISSN 0022-2836 JRNL PMID 21146533 JRNL DOI 10.1016/J.JMB.2010.12.007 REMARK 2 REMARK 2 RESOLUTION. 1.41 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.5_2 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.41 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.44 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.0 REMARK 3 NUMBER OF REFLECTIONS : 79420 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 4014 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.4599 - 4.3351 0.95 2797 158 0.1970 0.2236 REMARK 3 2 4.3351 - 3.4413 1.00 2889 149 0.1437 0.1834 REMARK 3 3 3.4413 - 3.0064 1.00 2855 171 0.1462 0.1867 REMARK 3 4 3.0064 - 2.7315 1.00 2867 148 0.1593 0.1931 REMARK 3 5 2.7315 - 2.5358 1.00 2847 170 0.1633 0.2110 REMARK 3 6 2.5358 - 2.3863 1.00 2829 160 0.1636 0.2232 REMARK 3 7 2.3863 - 2.2668 0.99 2856 142 0.1448 0.1652 REMARK 3 8 2.2668 - 2.1681 0.99 2842 166 0.1346 0.1545 REMARK 3 9 2.1681 - 2.0846 0.99 2793 166 0.1335 0.1796 REMARK 3 10 2.0846 - 2.0127 0.99 2867 134 0.1358 0.1608 REMARK 3 11 2.0127 - 1.9498 0.99 2852 126 0.1310 0.1421 REMARK 3 12 1.9498 - 1.8940 0.99 2810 138 0.1258 0.1706 REMARK 3 13 1.8940 - 1.8442 0.99 2794 177 0.1261 0.1686 REMARK 3 14 1.8442 - 1.7992 0.99 2843 126 0.1320 0.1787 REMARK 3 15 1.7992 - 1.7583 0.99 2763 161 0.1267 0.1735 REMARK 3 16 1.7583 - 1.7208 0.98 2833 142 0.1289 0.1666 REMARK 3 17 1.7208 - 1.6864 0.98 2772 158 0.1309 0.1985 REMARK 3 18 1.6864 - 1.6546 0.98 2803 148 0.1364 0.1772 REMARK 3 19 1.6546 - 1.6250 0.98 2780 149 0.1383 0.1802 REMARK 3 20 1.6250 - 1.5975 0.98 2796 149 0.1422 0.1816 REMARK 3 21 1.5975 - 1.5717 0.98 2758 130 0.1465 0.1791 REMARK 3 22 1.5717 - 1.5475 0.96 2762 145 0.1556 0.2525 REMARK 3 23 1.5475 - 1.5248 0.88 2505 125 0.1799 0.1890 REMARK 3 24 1.5248 - 1.5033 0.79 2251 123 0.1766 0.2315 REMARK 3 25 1.5033 - 1.4830 0.71 1998 114 0.1995 0.2676 REMARK 3 26 1.4830 - 1.4637 0.67 1905 98 0.2043 0.2627 REMARK 3 27 1.4637 - 1.4454 0.61 1718 95 0.2103 0.2829 REMARK 3 28 1.4454 - 1.4280 0.55 1563 90 0.2352 0.3122 REMARK 3 29 1.4280 - 1.4110 0.50 1458 56 0.2553 0.2670 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.41 REMARK 3 B_SOL : 79.98 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -6.35070 REMARK 3 B22 (A**2) : 2.41350 REMARK 3 B33 (A**2) : -7.32470 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.71340 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2851 REMARK 3 ANGLE : 1.075 3884 REMARK 3 CHIRALITY : 0.065 437 REMARK 3 PLANARITY : 0.005 526 REMARK 3 DIHEDRAL : 17.767 1068 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3OD9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-AUG-10. REMARK 100 THE DEPOSITION ID IS D_1000060969. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.98 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX10.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : SCALA, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 79434 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.410 REMARK 200 RESOLUTION RANGE LOW (A) : 47.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.2M SODIUM PHOSPHATE, 0.8M POTASSIUM REMARK 280 HYDROGEN PHOSPHATE, 0.1M CAPS, 0.2M LICL, PH 6.98, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 51.51050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.16350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 51.51050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.16350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -47.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -67.44450 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -74.08789 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 180 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 186 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 395 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 19 REMARK 465 ALA A 20 REMARK 465 PRO A 143 REMARK 465 ARG A 144 REMARK 465 ASP A 145 REMARK 465 LEU A 146 REMARK 465 GLU A 147 REMARK 465 HIS A 148 REMARK 465 HIS A 149 REMARK 465 HIS A 150 REMARK 465 HIS A 151 REMARK 465 HIS A 152 REMARK 465 HIS A 153 REMARK 465 MET B 19 REMARK 465 ALA B 20 REMARK 465 ASP B 21 REMARK 465 SER B 104 REMARK 465 GLY B 105 REMARK 465 ARG B 144 REMARK 465 ASP B 145 REMARK 465 LEU B 146 REMARK 465 GLU B 147 REMARK 465 HIS B 148 REMARK 465 HIS B 149 REMARK 465 HIS B 150 REMARK 465 HIS B 151 REMARK 465 HIS B 152 REMARK 465 HIS B 153 REMARK 465 MET C 19 REMARK 465 ALA C 20 REMARK 465 ASP C 21 REMARK 465 THR C 142 REMARK 465 PRO C 143 REMARK 465 ARG C 144 REMARK 465 ASP C 145 REMARK 465 LEU C 146 REMARK 465 GLU C 147 REMARK 465 HIS C 148 REMARK 465 HIS C 149 REMARK 465 HIS C 150 REMARK 465 HIS C 151 REMARK 465 HIS C 152 REMARK 465 HIS C 153 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 91 -13.97 81.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 2 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 119 O REMARK 620 2 LEU A 121 O 108.4 REMARK 620 3 ASP A 122 OD2 76.5 70.9 REMARK 620 4 ASP A 122 OD1 118.0 66.5 42.3 REMARK 620 5 HOH A 155 O 84.1 73.1 130.5 138.2 REMARK 620 6 HOH A 165 O 53.7 144.3 74.5 93.4 126.8 REMARK 620 7 HOH A 198 O 66.6 146.4 133.7 146.5 73.4 61.5 REMARK 620 8 HOH A 205 O 112.0 113.4 70.1 48.3 157.8 61.0 98.4 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 4 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 86 OD1 REMARK 620 2 ASN A 88 OD1 81.3 REMARK 620 3 ASP A 90 OD1 101.4 82.9 REMARK 620 4 GLN A 92 O 91.0 167.5 89.0 REMARK 620 5 GLU A 94 OE2 141.4 97.2 116.8 95.0 REMARK 620 6 GLU A 94 OE1 90.6 90.1 165.0 99.8 50.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 10 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 198 O REMARK 620 2 HOH A 205 O 113.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 1 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU B 121 O REMARK 620 2 ASP B 122 OD2 68.8 REMARK 620 3 HOH B 192 O 76.9 127.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 3 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 86 OD1 REMARK 620 2 ASN B 88 OD1 84.1 REMARK 620 3 ASP B 90 OD1 100.7 85.5 REMARK 620 4 GLN B 92 O 87.7 170.1 90.6 REMARK 620 5 GLU B 94 OE1 92.5 91.2 166.0 94.7 REMARK 620 6 GLU B 94 OE2 141.9 97.0 117.3 92.8 49.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 5 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 119 O REMARK 620 2 LEU C 121 O 111.1 REMARK 620 3 ASP C 122 OD2 74.6 72.0 REMARK 620 4 ASP C 122 OD1 115.1 68.6 42.2 REMARK 620 5 HOH C 189 O 82.5 73.2 127.2 141.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 6 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 86 OD1 REMARK 620 2 ASN C 88 OD1 81.9 REMARK 620 3 ASP C 90 OD1 96.4 82.6 REMARK 620 4 GLN C 92 O 90.6 165.9 86.5 REMARK 620 5 GLU C 94 OE1 96.4 85.1 160.8 107.7 REMARK 620 6 GLU C 94 OE2 144.0 91.0 117.8 102.0 47.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 10 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 11 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 12 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA C 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA C 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA C 7 DBREF 3OD9 A 20 145 UNP A0KHJ5 A0KHJ5_AERHH 20 145 DBREF 3OD9 B 20 145 UNP A0KHJ5 A0KHJ5_AERHH 20 145 DBREF 3OD9 C 20 145 UNP A0KHJ5 A0KHJ5_AERHH 20 145 SEQADV 3OD9 MET A 19 UNP A0KHJ5 INITIATING METHIONINE SEQADV 3OD9 LEU A 146 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 GLU A 147 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 HIS A 148 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 HIS A 149 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 HIS A 150 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 HIS A 151 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 HIS A 152 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 HIS A 153 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 MET B 19 UNP A0KHJ5 INITIATING METHIONINE SEQADV 3OD9 LEU B 146 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 GLU B 147 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 HIS B 148 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 HIS B 149 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 HIS B 150 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 HIS B 151 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 HIS B 152 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 HIS B 153 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 MET C 19 UNP A0KHJ5 INITIATING METHIONINE SEQADV 3OD9 LEU C 146 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 GLU C 147 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 HIS C 148 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 HIS C 149 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 HIS C 150 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 HIS C 151 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 HIS C 152 UNP A0KHJ5 EXPRESSION TAG SEQADV 3OD9 HIS C 153 UNP A0KHJ5 EXPRESSION TAG SEQRES 1 A 135 MET ALA ASP GLY PHE PHE LYS GLN LEU THR LEU PRO SER SEQRES 2 A 135 GLY GLN VAL VAL THR VAL SER GLU GLY ARG GLY GLU PRO SEQRES 3 A 135 ALA SER THR GLY SER TYR ASP VAL ARG LEU TYR SER GLY SEQRES 4 A 135 ALA ASN PRO GLN PHE PRO LEU ASP GLN PHE ILE ASP GLY SEQRES 5 A 135 LYS VAL LEU PRO ARG ASP GLY SER ILE LYS GLU LEU LYS SEQRES 6 A 135 LEU LEU ASP LEU ASN GLY ASP LYS GLN PRO GLU LEU ILE SEQRES 7 A 135 VAL VAL VAL GLU SER ALA GLY SER GLY SER TYR LEU SER SEQRES 8 A 135 ALA ASP ALA PHE THR LEU ASN PRO GLN GLU GLY LEU ASP SEQRES 9 A 135 SER PHE ASN HIS VAL GLU GLY LEU ALA PRO ASN GLU ASP SEQRES 10 A 135 VAL ILE GLN ALA LEU LYS THR PRO ARG ASP LEU GLU HIS SEQRES 11 A 135 HIS HIS HIS HIS HIS SEQRES 1 B 135 MET ALA ASP GLY PHE PHE LYS GLN LEU THR LEU PRO SER SEQRES 2 B 135 GLY GLN VAL VAL THR VAL SER GLU GLY ARG GLY GLU PRO SEQRES 3 B 135 ALA SER THR GLY SER TYR ASP VAL ARG LEU TYR SER GLY SEQRES 4 B 135 ALA ASN PRO GLN PHE PRO LEU ASP GLN PHE ILE ASP GLY SEQRES 5 B 135 LYS VAL LEU PRO ARG ASP GLY SER ILE LYS GLU LEU LYS SEQRES 6 B 135 LEU LEU ASP LEU ASN GLY ASP LYS GLN PRO GLU LEU ILE SEQRES 7 B 135 VAL VAL VAL GLU SER ALA GLY SER GLY SER TYR LEU SER SEQRES 8 B 135 ALA ASP ALA PHE THR LEU ASN PRO GLN GLU GLY LEU ASP SEQRES 9 B 135 SER PHE ASN HIS VAL GLU GLY LEU ALA PRO ASN GLU ASP SEQRES 10 B 135 VAL ILE GLN ALA LEU LYS THR PRO ARG ASP LEU GLU HIS SEQRES 11 B 135 HIS HIS HIS HIS HIS SEQRES 1 C 135 MET ALA ASP GLY PHE PHE LYS GLN LEU THR LEU PRO SER SEQRES 2 C 135 GLY GLN VAL VAL THR VAL SER GLU GLY ARG GLY GLU PRO SEQRES 3 C 135 ALA SER THR GLY SER TYR ASP VAL ARG LEU TYR SER GLY SEQRES 4 C 135 ALA ASN PRO GLN PHE PRO LEU ASP GLN PHE ILE ASP GLY SEQRES 5 C 135 LYS VAL LEU PRO ARG ASP GLY SER ILE LYS GLU LEU LYS SEQRES 6 C 135 LEU LEU ASP LEU ASN GLY ASP LYS GLN PRO GLU LEU ILE SEQRES 7 C 135 VAL VAL VAL GLU SER ALA GLY SER GLY SER TYR LEU SER SEQRES 8 C 135 ALA ASP ALA PHE THR LEU ASN PRO GLN GLU GLY LEU ASP SEQRES 9 C 135 SER PHE ASN HIS VAL GLU GLY LEU ALA PRO ASN GLU ASP SEQRES 10 C 135 VAL ILE GLN ALA LEU LYS THR PRO ARG ASP LEU GLU HIS SEQRES 11 C 135 HIS HIS HIS HIS HIS HET K A 2 1 HET NA A 4 1 HET NA A 8 1 HET NA A 9 1 HET NA A 10 1 HET NA A 11 1 HET NA A 12 1 HET K B 1 1 HET NA B 3 1 HET NA C 5 1 HET NA C 6 1 HET NA C 7 1 HETNAM K POTASSIUM ION HETNAM NA SODIUM ION FORMUL 4 K 2(K 1+) FORMUL 5 NA 10(NA 1+) FORMUL 16 HOH *534(H2 O) HELIX 1 1 ASP A 135 THR A 142 1 8 HELIX 2 2 ASP B 135 THR B 142 1 8 HELIX 3 3 ASP C 135 LYS C 141 1 7 SHEET 1 A 4 PHE A 24 THR A 28 0 SHEET 2 A 4 VAL A 34 GLU A 39 -1 O VAL A 35 N LEU A 27 SHEET 3 A 4 GLY A 48 TYR A 55 -1 O TYR A 55 N VAL A 34 SHEET 4 A 4 PHE A 67 ARG A 75 -1 O ASP A 69 N LEU A 54 SHEET 1 B 4 SER A 78 LEU A 85 0 SHEET 2 B 4 GLU A 94 GLU A 100 -1 O VAL A 98 N LYS A 80 SHEET 3 B 4 LEU A 108 ASN A 116 -1 O SER A 109 N VAL A 99 SHEET 4 B 4 GLY A 120 LEU A 130 -1 O PHE A 124 N ALA A 112 SHEET 1 C 4 PHE B 24 THR B 28 0 SHEET 2 C 4 VAL B 34 GLU B 39 -1 O VAL B 35 N LEU B 27 SHEET 3 C 4 GLY B 48 TYR B 55 -1 O TYR B 55 N VAL B 34 SHEET 4 C 4 PHE B 67 ARG B 75 -1 O ASP B 69 N LEU B 54 SHEET 1 D 4 SER B 78 LEU B 85 0 SHEET 2 D 4 GLU B 94 GLU B 100 -1 O VAL B 98 N LYS B 80 SHEET 3 D 4 LEU B 108 ASN B 116 -1 O SER B 109 N VAL B 99 SHEET 4 D 4 GLY B 120 LEU B 130 -1 O PHE B 124 N ALA B 112 SHEET 1 E 4 PHE C 24 THR C 28 0 SHEET 2 E 4 VAL C 34 GLU C 39 -1 O VAL C 35 N LEU C 27 SHEET 3 E 4 GLY C 48 TYR C 55 -1 O TYR C 55 N VAL C 34 SHEET 4 E 4 PHE C 67 ARG C 75 -1 O ASP C 69 N LEU C 54 SHEET 1 F 4 SER C 78 LEU C 85 0 SHEET 2 F 4 GLU C 94 GLU C 100 -1 O VAL C 98 N LYS C 80 SHEET 3 F 4 LEU C 108 ASN C 116 -1 O SER C 109 N VAL C 99 SHEET 4 F 4 GLY C 120 LEU C 130 -1 O PHE C 124 N ALA C 112 LINK K K A 2 O GLU A 119 1555 1555 2.83 LINK K K A 2 O LEU A 121 1555 1555 2.89 LINK K K A 2 OD2 ASP A 122 1555 1555 2.95 LINK K K A 2 OD1 ASP A 122 1555 1555 3.15 LINK K K A 2 O HOH A 155 1555 1555 2.90 LINK K K A 2 O HOH A 165 1555 1555 3.26 LINK K K A 2 O HOH A 198 1555 1555 3.42 LINK K K A 2 O HOH A 205 1555 1555 3.46 LINK NA NA A 4 OD1 ASP A 86 1555 1555 2.49 LINK NA NA A 4 OD1 ASN A 88 1555 1555 2.41 LINK NA NA A 4 OD1 ASP A 90 1555 1555 2.48 LINK NA NA A 4 O GLN A 92 1555 1555 2.36 LINK NA NA A 4 OE2 GLU A 94 1555 1555 2.55 LINK NA NA A 4 OE1 GLU A 94 1555 1555 2.59 LINK NA NA A 10 O HOH A 198 1555 1555 3.12 LINK NA NA A 10 O HOH A 205 1555 1555 3.09 LINK NA NA A 11 OE2BGLU A 119 1555 1555 2.91 LINK K K B 1 O LEU B 121 1555 1555 3.25 LINK K K B 1 OD2 ASP B 122 1555 1555 3.17 LINK K K B 1 O HOH B 192 1555 1555 3.32 LINK NA NA B 3 OD1 ASP B 86 1555 1555 2.57 LINK NA NA B 3 OD1 ASN B 88 1555 1555 2.55 LINK NA NA B 3 OD1 ASP B 90 1555 1555 2.61 LINK NA NA B 3 O GLN B 92 1555 1555 2.48 LINK NA NA B 3 OE1 GLU B 94 1555 1555 2.61 LINK NA NA B 3 OE2 GLU B 94 1555 1555 2.65 LINK NA NA C 5 O GLU C 119 1555 1555 2.79 LINK NA NA C 5 O LEU C 121 1555 1555 2.93 LINK NA NA C 5 OD2 ASP C 122 1555 1555 3.03 LINK NA NA C 5 OD1 ASP C 122 1555 1555 3.10 LINK NA NA C 5 O HOH C 189 1555 1555 2.95 LINK NA NA C 6 OD1 ASP C 86 1555 1555 2.57 LINK NA NA C 6 OD1 ASN C 88 1555 1555 2.69 LINK NA NA C 6 OD1 ASP C 90 1555 1555 2.68 LINK NA NA C 6 O GLN C 92 1555 1555 2.48 LINK NA NA C 6 OE1 GLU C 94 1555 1555 2.62 LINK NA NA C 6 OE2 GLU C 94 1555 1555 2.80 SITE 1 AC1 4 GLU A 119 LEU A 121 ASP A 122 HOH A 155 SITE 1 AC2 5 ASP A 86 ASN A 88 ASP A 90 GLN A 92 SITE 2 AC2 5 GLU A 94 SITE 1 AC3 3 HOH A 205 LYS B 25 GLN B 26 SITE 1 AC4 2 ASN A 88 GLU A 119 SITE 1 AC5 2 LYS A 71 ASP A 122 SITE 1 AC6 3 GLU B 119 LEU B 121 ASP B 122 SITE 1 AC7 5 ASP B 86 ASN B 88 ASP B 90 GLN B 92 SITE 2 AC7 5 GLU B 94 SITE 1 AC8 4 GLU C 119 LEU C 121 ASP C 122 HOH C 189 SITE 1 AC9 5 ASP C 86 ASN C 88 ASP C 90 GLN C 92 SITE 2 AC9 5 GLU C 94 SITE 1 BC1 1 LYS C 71 CRYST1 103.021 60.327 82.187 90.00 115.65 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009707 0.000000 0.004661 0.00000 SCALE2 0.000000 0.016576 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013497 0.00000